Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATAACAACAACATGGTGACTGATTTTCAGCAATCACAACAACGACAACTAACCGAGCTAATACAAACCCTCGAACAAGCTACTTTAATGGCGAAACAACTCCCCACAACCACCGATCCTGATCACCACCGGCTTATCTTTTCTTCGCTCTCCTCTGCCCAACTTTCTCTTTCCTCCTTCCTCTCTCTCCACCCCAACAACAACAACGCCGATAATTCCGTCTCCTCCGCCGCCGTCGCAGATGATGAGCCGATGATGGCCGCTGATGATGGAGACGAGGAGCTGATGTCGAAAGACTCGTCAATGGATAGAGTGGAGGAAAGGTTGAGAGAGTGCCTCTACATTCAGAATAAGCGGCCGAAAAGACCGCTTTCTCCTTCGTTCATCGCCGCCGTAGAACGGCGGAATTTGGAGGAGAGAGAATTTATAGAGTTTTCGGCGGATGTTGATCCTGTTGCTACTCGGTTGAGGAATTTGGACCTTGTTTTTCAATTTCATGGCTAA ATGGAGAATAACAACAACATGGTGACTGATTTTCAGCAATCACAACAACGACAACTAACCGAGCTAATACAAACCCTCGAACAAGCTACTTTAATGGCGAAACAACTCCCCACAACCACCGATCCTGATCACCACCGGCTTATCTTTTCTTCGCTCTCCTCTGCCCAACTTTCTCTTTCCTCCTTCCTCTCTCTCCACCCCAACAACAACAACGCCGATAATTCCGTCTCCTCCGCCGCCGTCGCAGATGATGAGCCGATGATGGCCGCTGATGATGGAGACGAGGAGCTGATGTCGAAAGACTCGTCAATGGATAGAGTGGAGGAAAGGTTGAGAGAGTGCCTCTACATTCAGAATAAGCGGCCGAAAAGACCGCTTTCTCCTTCGTTCATCGCCGCCGTAGAACGGCGGAATTTGGAGGAGAGAGAATTTATAGAGTTTTCGGCGGATGTTGATCCTGTTGCTACTCGGTTGAGGAATTTGGACCTTGTTTTTCAATTTCATGGCTAA ATGGAGAATAACAACAACATGGTGACTGATTTTCAGCAATCACAACAACGACAACTAACCGAGCTAATACAAACCCTCGAACAAGCTACTTTAATGGCGAAACAACTCCCCACAACCACCGATCCTGATCACCACCGGCTTATCTTTTCTTCGCTCTCCTCTGCCCAACTTTCTCTTTCCTCCTTCCTCTCTCTCCACCCCAACAACAACAACGCCGATAATTCCGTCTCCTCCGCCGCCGTCGCAGATGATGAGCCGATGATGGCCGCTGATGATGGAGACGAGGAGCTGATGTCGAAAGACTCGTCAATGGATAGAGTGGAGGAAAGGTTGAGAGAGTGCCTCTACATTCAGAATAAGCGGCCGAAAAGACCGCTTTCTCCTTCGTTCATCGCCGCCGTAGAACGGCGGAATTTGGAGGAGAGAGAATTTATAGAGTTTTCGGCGGATGTTGATCCTGTTGCTACTCGGTTGAGGAATTTGGACCTTGTTTTTCAATTTCATGGCTAA MENNNNMVTDFQQSQQRQLTELIQTLEQATLMAKQLPTTTDPDHHRLIFSSLSSAQLSLSSFLSLHPNNNNADNSVSSAAVADDEPMMAADDGDEELMSKDSSMDRVEERLRECLYIQNKRPKRPLSPSFIAAVERRNLEEREFIEFSADVDPVATRLRNLDLVFQFHG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo06665.1 vs. NCBI nr
Match: gi|902181506|gb|KNA09760.1| (hypothetical protein SOVF_150670 [Spinacia oleracea]) HSP 1 Score: 319.7 bits (818), Expect = 3.100e-84 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Spo06665.1 vs. NCBI nr
Match: gi|731361411|ref|XP_010692340.1| (PREDICTED: uncharacterized protein LOC104905481 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 205.7 bits (522), Expect = 6.400e-50 Identity = 115/168 (68.45%), Postives = 135/168 (80.36%), Query Frame = 1
BLAST of Spo06665.1 vs. NCBI nr
Match: gi|743829184|ref|XP_011023446.1| (PREDICTED: uncharacterized protein LOC105124927 [Populus euphratica]) HSP 1 Score: 127.5 bits (319), Expect = 2.200e-26 Identity = 84/161 (52.17%), Postives = 105/161 (65.22%), Query Frame = 1
BLAST of Spo06665.1 vs. NCBI nr
Match: gi|566203064|ref|XP_002320095.2| (hypothetical protein POPTR_0014s07300g [Populus trichocarpa]) HSP 1 Score: 125.9 bits (315), Expect = 6.500e-26 Identity = 84/163 (51.53%), Postives = 103/163 (63.19%), Query Frame = 1
BLAST of Spo06665.1 vs. NCBI nr
Match: gi|1009162260|ref|XP_015899342.1| (PREDICTED: uncharacterized protein LOC107432670 [Ziziphus jujuba]) HSP 1 Score: 124.8 bits (312), Expect = 1.400e-25 Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 1
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150670 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.100e-84 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EAW1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019940 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.500e-50 Identity = 115/168 (68.45%), Postives = 135/168 (80.36%), Query Frame = 1
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Match: B9IC74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07300g PE=4 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 4.500e-26 Identity = 84/163 (51.53%), Postives = 103/163 (63.19%), Query Frame = 1
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Match: B9GPU3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15440g PE=4 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 1.700e-25 Identity = 88/177 (49.72%), Postives = 108/177 (61.02%), Query Frame = 1
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Match: A0A067H1W1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030684mg PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 9.400e-24 Identity = 80/158 (50.63%), Postives = 101/158 (63.92%), Query Frame = 1
BLAST of Spo06665.1 vs. TAIR (Arabidopsis)
Match: AT1G01840.1 (unknown protein) HSP 1 Score: 92.4 bits (228), Expect = 2.800e-19 Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06665.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06665.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06665.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo06665.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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