Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCATGACCCTATAGGTATACCTATTGAGCATGATCTTTCCCCTGTACACGCCTACATGACACCAAAACCACCACCAGCACCACCAACAACAACCACCACCACCGCCGCCGCTACCAACGCCGCCACCCGCACGTTAACCCGATCACGATCCGGGTCAGGGTCAGGGTCTCCACAAAGCCTGATAATGTCGGTATATAGCACCAAAATCGCAAGCCAACCTCGATTAGTCACCATCACATGGTGCAAGAACCTCCTCCTCCACGGCCTCTCGGTGTCCGTCGACGGCCCTCGCGACACCGATCACTACCACAGCAAGGTGGAGCTTAAGCCGTGGTATTTCTGGAGGAAACAAGGAAGCAAACAGCTTGTCGTTGACGGGAAAGTCATCGGCATTGTTTGGGATCTCAAGGCGGCCAAGTTTAACGGCGAGGTTGAGCCTCAATCGGACTACTACGTCGCCATTGTTTCCGACGAGGAGGTGGTTCTCGTAGTCGGAGACATGAAGAAGGACGCTTTCCGGCGAACCCGGTGTAGGCCCGCTCTTATTGACCCTGTTTTAGTCTCTAGGAAAGAGCATATTTTTGGTAAGAAAAGGTTTTCTACTAAGGTTAAATTTCATGAAAGAGGGAAATGTCATGAGATTTCAGTTGAGTGTAATAATAATAATTATAATCATAATAATAATAATATTATTAATAATAATAAGGGGGGTGTTGATTGTGAAGGGATTAGTAGTAGTCCTGAAATGGATATTAAGATAGATGGGAAATTAGCAACACAAGTTAAACATCTACAATGGAAGTTTAGAGGGAATGAATCGATTGATGTTAAGGAGACTAAGATTGAAGTGTATTGGGATGTTCATGATTGGATATTCGGGTCTGGTCCTCGACACGCTATGTTCTTGTTCAAGTCGTCGTCACCACCGTCGTCGTCGTCATCGACATCGTCGTCGTTATCATTTCATGCAGATGATCCTGCATGTAGGGAGTATGGTTGGAGTAGTGGCTCACCGGAGTTTAGGTTGTTTCTTTATGCTTGGAAAGTTGAATGATAACGACGACGATGATAAGACTGAAAGCTTGTGCACGATTGTTGTTATCATAATTTGGAAGCATTTTCATGGAATTGAAGAGAAGGGGAACAAAGGTTGGTCATGTCACATGGGATTATTGGAAGAGCCCACAACAATAAGGGAGCTTAGGTTGTGACAATATGGGACTCAATAAATTTGAGGATGGGACATAATTAAATGATGGGCATGTAATTTAAAGAGCTTTTTTGTGTACTTGATAATTATTTATACATTTATATCATAAGAAAATATTAAAATTTCTGCAAAATTAATTATATTCCACCCGTTTTAATTTGGTGTATTGAAATATAATCTTTTTTTTAGAGTTTTATTAATTTTGATGTAACATGTTTGAGAAGATATATGTATTATGCCAATATTAAAGGGTTTTTTCCCACCGGATAATACCTTATCGGAACTTGATATATGCATGTTTGTATATTGTCAATTAAGTATTAAACCTTTCTCATTCGCTTATTTATATGGTTACTGATAGATTATGTAAATAATCTTATGTAATCGTAGATATTATTCTGTATATCGTAGATTGATTTAGTGTATCTCGTAGATTGATTCGGTGTATAATCTACCTTCTTAATGTACACTAATATGTATGTACAGAATAATATCTACGATTACATAAGATTATTTACATAATCTATCAGTTACATTTAAATTTATACATATGCAACTCTAAAGACAAGAATGGTAGTATTAATTTAAATTGATATCTTAGAATTAAGAGCTAAAGGGCCATGGGCAATGTTATGATTCACAAAACCTTGAAAGTTGCCATGAAAATAAAACATTTTAGCTGTTCTTGGTAAATTCAGATCTGAAATCCAATAAATAATTCAAGACTTTTGGGTTCCTAAATATCAAATTAGAAACCTTAGTTATCATGGAATAGCCTACTTATCCAATGATCCAAACATTTGTTGATGATGTAACGTGTATTATGATAAAGGGAGACATAAACACGAGAGTAATTGGCCAAATAATTAGAGCTAGCCCACGTAAACATGTGAGAATTAAGATAAGAGGAAAAGCTAAGGCATATCATTGATGATAAGGAGTGTAATGGATTAGTTAATGGGGACATATAAGGGATGTTAATGGGGCGGGGCGGATGCGGATGTAGGTCCCTCCATCTCCATCCCCACCTAAAATTTTCATTTCCATCCCCGCCCCATCACCCATGGCGCGTACAAAATTCATCCCTATCCCCGCCCAAACAAGTGTAAGCTAAAATCCATCCCGCCCCGCCACCCAACTGGGTATCCATCCCCGTCTTATCCCCGCTTCATACCCACGCTAATACCCTCCTAATTTTTCTTATTTAGCAAACATTTGTCATATATACGGTCATACGGAGTAATAAAAGTTAACTATAGAAAAAAAATAGCTTATGACTAAAGTAACCTATATAATCGAAAAAAATACTCGTCATAACAAAAAAATCCAAACAAAAAACATAAAAAATCTCACTAAAATTTATATTATCACCTAAAGATGATAATAAATCCAAACTCACCCCATCACCCATGGCGGGTATGAAGCGGGGCAAGTGGGGATGGGATGGGGTGGGGCGGGGATGGGGCGGGTACAACACAAATTCCACACCCGCCCCATCACCCATGGCGGGTACGATTTTTATACCTAACCCCTCCCCATCACCCGCCAAACCTACCTCCATCCCCGCCTACTTGGGACGGATGCGGGACGGGCCTCCCGCGAAACCCTCCCCACTGACATCCCTACATAACTATATTAGCAGAAAAGAAGTCAAAATTGGTCAATGAAACACAAGAGTACGTGATTTACCTAAAAAGGCTAAAAGACTTTGTAAAGGGCTTCTAAATAATGGTCAAAGATGCCCACAAATGGAAAGAAGATTGGGTAATTGTTGAAATACCATTTTATTTTATTTTTTAATTTCTAGGAATGATGGTCCAACTTTTGAATCTATGTCAAAAAATCAAAAGAATCTAAAGAATAAACATCTTTTGATTCTTTTTACCAATGTTCATTGA ATGATGCATGACCCTATAGGTATACCTATTGAGCATGATCTTTCCCCTGTACACGCCTACATGACACCAAAACCACCACCAGCACCACCAACAACAACCACCACCACCGCCGCCGCTACCAACGCCGCCACCCGCACGTTAACCCGATCACGATCCGGGTCAGGGTCAGGGTCTCCACAAAGCCTGATAATGTCGGTATATAGCACCAAAATCGCAAGCCAACCTCGATTAGTCACCATCACATGGTGCAAGAACCTCCTCCTCCACGGCCTCTCGGTGTCCGTCGACGGCCCTCGCGACACCGATCACTACCACAGCAAGGTGGAGCTTAAGCCGTGGTATTTCTGGAGGAAACAAGGAAGCAAACAGCTTGTCGTTGACGGGAAAGTCATCGGCATTGTTTGGGATCTCAAGGCGGCCAAGTTTAACGGCGAGGTTGAGCCTCAATCGGACTACTACGTCGCCATTGTTTCCGACGAGGAGGTGGTTCTCGTAGTCGGAGACATGAAGAAGGACGCTTTCCGGCGAACCCGGTGTAGGCCCGCTCTTATTGACCCTGTTTTAGTCTCTAGGAAAGAGCATATTTTTGGTAAGAAAAGGTTTTCTACTAAGGTTAAATTTCATGAAAGAGGGAAATGTCATGAGATTTCAGTTGAGTGTAATAATAATAATTATAATCATAATAATAATAATATTATTAATAATAATAAGGGGGGTGTTGATTGTGAAGGGATTAGTAGTAGTCCTGAAATGGATATTAAGATAGATGGGAAATTAGCAACACAAGTTAAACATCTACAATGGAAGTTTAGAGGGAATGAATCGATTGATGTTAAGGAGACTAAGATTGAAGTGTATTGGGATGTTCATGATTGGATATTCGGGTCTGGTCCTCGACACGCTATGTTCTTGTTCAAGTCGTCGTCACCACCGTCGTCGTCGTCATCGACATCGTCGTCGTTATCATTTCATGCAGATGATCCTGCATGTAGGGAGTATGGTTGGAGTAGTGGCTCACCGGAGTTTAGGAATGATGGTCCAACTTTTGAATCTATGTCAAAAAATCAAAAGAATCTAAAGAATAAACATCTTTTGATTCTTTTTACCAATGTTCATTGA ATGATGCATGACCCTATAGGTATACCTATTGAGCATGATCTTTCCCCTGTACACGCCTACATGACACCAAAACCACCACCAGCACCACCAACAACAACCACCACCACCGCCGCCGCTACCAACGCCGCCACCCGCACGTTAACCCGATCACGATCCGGGTCAGGGTCAGGGTCTCCACAAAGCCTGATAATGTCGGTATATAGCACCAAAATCGCAAGCCAACCTCGATTAGTCACCATCACATGGTGCAAGAACCTCCTCCTCCACGGCCTCTCGGTGTCCGTCGACGGCCCTCGCGACACCGATCACTACCACAGCAAGGTGGAGCTTAAGCCGTGGTATTTCTGGAGGAAACAAGGAAGCAAACAGCTTGTCGTTGACGGGAAAGTCATCGGCATTGTTTGGGATCTCAAGGCGGCCAAGTTTAACGGCGAGGTTGAGCCTCAATCGGACTACTACGTCGCCATTGTTTCCGACGAGGAGGTGGTTCTCGTAGTCGGAGACATGAAGAAGGACGCTTTCCGGCGAACCCGGTGTAGGCCCGCTCTTATTGACCCTGTTTTAGTCTCTAGGAAAGAGCATATTTTTGGTAAGAAAAGGTTTTCTACTAAGGTTAAATTTCATGAAAGAGGGAAATGTCATGAGATTTCAGTTGAGTGTAATAATAATAATTATAATCATAATAATAATAATATTATTAATAATAATAAGGGGGGTGTTGATTGTGAAGGGATTAGTAGTAGTCCTGAAATGGATATTAAGATAGATGGGAAATTAGCAACACAAGTTAAACATCTACAATGGAAGTTTAGAGGGAATGAATCGATTGATGTTAAGGAGACTAAGATTGAAGTGTATTGGGATGTTCATGATTGGATATTCGGGTCTGGTCCTCGACACGCTATGTTCTTGTTCAAGTCGTCGTCACCACCGTCGTCGTCGTCATCGACATCGTCGTCGTTATCATTTCATGCAGATGATCCTGCATGTAGGGAGTATGGTTGGAGTAGTGGCTCACCGGAGTTTAGGAATGATGGTCCAACTTTTGAATCTATGTCAAAAAATCAAAAGAATCTAAAGAATAAACATCTTTTGATTCTTTTTACCAATGTTCATTGA MMHDPIGIPIEHDLSPVHAYMTPKPPPAPPTTTTTTAAATNAATRTLTRSRSGSGSGSPQSLIMSVYSTKIASQPRLVTITWCKNLLLHGLSVSVDGPRDTDHYHSKVELKPWYFWRKQGSKQLVVDGKVIGIVWDLKAAKFNGEVEPQSDYYVAIVSDEEVVLVVGDMKKDAFRRTRCRPALIDPVLVSRKEHIFGKKRFSTKVKFHERGKCHEISVECNNNNYNHNNNNIINNNKGGVDCEGISSSPEMDIKIDGKLATQVKHLQWKFRGNESIDVKETKIEVYWDVHDWIFGSGPRHAMFLFKSSSPPSSSSSTSSSLSFHADDPACREYGWSSGSPEFRNDGPTFESMSKNQKNLKNKHLLILFTNVH Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05830.1 vs. NCBI nr
Match: gi|902239774|gb|KNA25716.1| (hypothetical protein SOVF_003370 [Spinacia oleracea]) HSP 1 Score: 679.1 bits (1751), Expect = 4.400e-192 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
BLAST of Spo05830.1 vs. NCBI nr
Match: gi|731342262|ref|XP_010682310.1| (PREDICTED: uncharacterized protein LOC104897184 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 471.5 bits (1212), Expect = 1.400e-129 Identity = 250/342 (73.10%), Postives = 264/342 (77.19%), Query Frame = 1
BLAST of Spo05830.1 vs. NCBI nr
Match: gi|870856073|gb|KMT07765.1| (hypothetical protein BVRB_6g146880 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 471.5 bits (1212), Expect = 1.400e-129 Identity = 250/342 (73.10%), Postives = 264/342 (77.19%), Query Frame = 1
BLAST of Spo05830.1 vs. NCBI nr
Match: gi|223530457|gb|EEF32341.1| (protein phosphatase 2c, putative [Ricinus communis]) HSP 1 Score: 360.9 bits (925), Expect = 2.600e-96 Identity = 175/266 (65.79%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of Spo05830.1 vs. NCBI nr
Match: gi|1000945074|ref|XP_015581388.1| (PREDICTED: uncharacterized protein LOC107262123 [Ricinus communis]) HSP 1 Score: 360.9 bits (925), Expect = 2.600e-96 Identity = 175/266 (65.79%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1U0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003370 PE=3 SV=1) HSP 1 Score: 679.1 bits (1751), Expect = 3.100e-192 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1X0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146880 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 9.700e-130 Identity = 250/342 (73.10%), Postives = 264/342 (77.19%), Query Frame = 1
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Match: B9SVM2_RICCO (Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_0794030 PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.800e-96 Identity = 175/266 (65.79%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Match: F6GVM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00740 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 3.100e-96 Identity = 175/275 (63.64%), Postives = 210/275 (76.36%), Query Frame = 1
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Match: A0A067GU71_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020915mg PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 7.700e-95 Identity = 172/285 (60.35%), Postives = 216/285 (75.79%), Query Frame = 1
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Match: AT4G12690.1 (Plant protein of unknown function (DUF868)) HSP 1 Score: 227.6 bits (579), Expect = 1.200e-59 Identity = 112/264 (42.42%), Postives = 165/264 (62.50%), Query Frame = 1
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Match: AT2G04220.1 (Plant protein of unknown function (DUF868)) HSP 1 Score: 222.2 bits (565), Expect = 5.200e-58 Identity = 112/260 (43.08%), Postives = 157/260 (60.38%), Query Frame = 1
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Match: AT5G48270.1 (Plant protein of unknown function (DUF868)) HSP 1 Score: 211.8 bits (538), Expect = 7.000e-55 Identity = 120/286 (41.96%), Postives = 170/286 (59.44%), Query Frame = 1
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Match: AT5G28150.1 (Plant protein of unknown function (DUF868)) HSP 1 Score: 194.9 bits (494), Expect = 8.800e-50 Identity = 105/279 (37.63%), Postives = 161/279 (57.71%), Query Frame = 1
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Match: AT3G04860.1 (Plant protein of unknown function (DUF868)) HSP 1 Score: 194.5 bits (493), Expect = 1.200e-49 Identity = 105/286 (36.71%), Postives = 163/286 (56.99%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05830.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05830.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05830.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05830.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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