Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCATGTGCTCAAAACTACCCTTCATTAGCAATGCAATTAAGAAAGCTGCAGGCTGTGGTAAGTCCTCAGGGCCCTTTACTGACCTTTTGTAGTGGTTGTGCCGGCTGTGGTAATACATTTTGACCCCCTTTCCCCCTTTTAAATAACCTTAGCATGTTTTTTTTCTTTTTTTTTTGGTAAGTAAGAAATATATTAACAAATCGTAATCAAATGTATGAACCTTAGCATGTTTTTTTTTCACTATGTTCTTTGGCTGCTTGTACTTTTTGCTGCAGAAGAGAATTATATTGCTATAGGCAACAAACACAACATTAAGTTTTTGGCATAATTGTATATAACCATAAGGCTCTAATTGGGATCCTTGGTTCTTCGGAATTGAGGAGGCTTAATCTTTTTCTAAAGAAAAATGGGTAATTACAAATGTAAGTAGATGAAGCCACTTAAGAGCTCAATTGTGTCATGCTAAGCCATAGCCCATAGGTGGGGTTCATAGTGTTCATTCTTATTACCTTGAGTTTTGGATTAGTTGGACTGGCCGTATGTTCAATAATGGTTATCCCTACAGGGTCCGGAGACAGGTACATCAATCCCCTTTTCAGAAGGTTATTTTCTTATACGGGGACATTAGAGGATTGAACAATATATTTTGCTCATAGTGTCACGTTTGGGGAGTTTGCAAATCACAAGGTCACTTTAGAATTTTGCAAAACACAAGGTTAGCATGTAGAATTTCCCTTTATTTTTTTATTTATTTTGGATGAAATGCAAGCTTTTTTGTCATTAATGCAATGGGGTGTTAGCCAAATATCCTTCAAGGAAGAAAAATTCCCTACCAGAAGATTTGATGGGTTCTTTGAAAAGATTGGCTTAAGCCATTTCATCCTTTTCAATTTTGTGGCAGGATGTCCCTGGAAAATATTGAATCCTGTACTTGCAACAGACTCTGATTTTAGGATTGCTTGATCTTCCTTGCTTAGGTGACACCACTCGAGGCCTTAGTTTACTGGCTCATTGTTCTTTCTGTTCTCCCATGTCATCCATGCTGGCTGCAGCATGAATATAGTGACATCATCCTTTTCATACTATAATTCTATTATTTTTAGATCATGTGCACCTTCTGCATCCAGTTAACAGGCATATGTTCTAATCTACTTGGGAAGTACTGTGATTCTAACGCCAAATATATGGCTATTCTCTGCTGTTACTAAAAATCAAGGTTATCAGTTCGAATATGACATAACCGGATATGAATCTTGCAGATTCCTTCAATCTTGTGGTCAACAACGGTGCTGCTGCTGGCCAAGTCATATTCCATGTGAGTAAAATGCTGTTAAACCTCACTCTGATGTTTTTAATGACCACACAAGTTTTACAATCCATCAACCCCTGGTTTGCAAAAACGTGACTGTTTTAGTTAGGGCCAACAGATGTTATTATTTCTAAAGTGAGTGTTTTTAGTTTGTTCGATTAAGTTATTAGTTCTAGTTGTAATTATCAAATGATTTAAGTTATGTGCTATTTTTTGTGGCATCTTTAGACACACATCCATATAATTCCACGGAAGTTGCATGATCGCTTGTGGGATACAGAGGTATGACTACTTTCTACTCGTGTAATGGCTTCATACCACTATCGTTATTTAGTAAAACAAAGCTGATAAGAAGTGGAACTGTTTTGTAGAGCTTGAGGCGGCTATCTTTGAAATTGGATGAGGAGGCACCTCATCTTGTAGAAAGCATTCGAGAACATCTTTCGCTTGCAAACAGTGAGGAAGAATGCAAGGATCAAGCTTCAGCTTTGGCTGGGAATTGTAGAGAATGATCCGGTTGAATGTAATGTTTGTACACTAAATGGGTGCTTTTTATTCTTTTTCTAATTTAATCGCGCGAAAGCATGTAGATTATGCAATGTTGTAAAAAAAAATAAAAACCTTTGAGATCAATCAAATTGTATGATTGTATTCATCATGTCATCCAATTTCCTCATTTGTTTGGCTTTCTCAAAGTGTGTTTGCTGAAAGTTTCGACTTCTTGATTGACAATTTCTCATTGTAAGTTTGTAACAGCTTGAAGACCTACTCTGAACTTTTTGTATGGTTCGAAACTTGAAGCCATTTTCAAAAGAGTTAACAATAATTATTCAA ATGGCTGCCATGTGCTCAAAACTACCCTTCATTAGCAATGCAATTAAGAAAGCTGCAGGCTGTGATTCCTTCAATCTTGTGGTCAACAACGGTGCTGCTGCTGGCCAAGTCATATTCCATACACACATCCATATAATTCCACGGAAGTTGCATGATCGCTTGTGGGATACAGAGAGCTTGAGGCGGCTATCTTTGAAATTGGATGAGGAGGCACCTCATCTTGTAGAAAGCATTCGAGAACATCTTTCGCTTGCAAACAGTGAGGAAGAATGCAAGGATCAAGCTTCAGCTTTGGCTGGGAATTGTAGAGAATGATCCGGTTGAATGTAATGTTTGTACACTAAATGGGTGCTTTTTATTCTTTTTCTAATTTAATCGCGCGAAAGCATGTAGATTATGCAATGTTGTAAAAAAAAATAAAAACCTTTGAGATCAATCAAATTGTATGATTGTATTCATCATGTCATCCAATTTCCTCATTTGTTTGGCTTTCTCAAAGTGTGTTTGCTGAAAGTTTCGACTTCTTGATTGACAATTTCTCATTGTAAGTTTGTAACAGCTTGAAGACCTACTCTGAACTTTTTGTATGGTTCGAAACTTGAAGCCATTTTCAAAAGAGTTAACAATAATTATTCAA ATGGCTGCCATGTGCTCAAAACTACCCTTCATTAGCAATGCAATTAAGAAAGCTGCAGGCTGTGATTCCTTCAATCTTGTGGTCAACAACGGTGCTGCTGCTGGCCAAGTCATATTCCATACACACATCCATATAATTCCACGGAAGTTGCATGATCGCTTGTGGGATACAGAGAGCTTGAGGCGGCTATCTTTGAAATTGGATGAGGAGGCACCTCATCTTGTAGAAAGCATTCGAGAACATCTTTCGCTTGCAAACAGTGAGGAAGAATGCAAGGATCAAGCTTCAGCTTTGGCTGGGAATTGTAGAGAATGA MAAMCSKLPFISNAIKKAAGCDSFNLVVNNGAAAGQVIFHTHIHIIPRKLHDRLWDTESLRRLSLKLDEEAPHLVESIREHLSLANSEEECKDQASALAGNCRE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07615.1 vs. NCBI nr
Match: gi|902219358|gb|KNA18296.1| (hypothetical protein SOVF_072190 isoform B [Spinacia oleracea]) HSP 1 Score: 208.0 bits (528), Expect = 8.000e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Spo07615.1 vs. NCBI nr
Match: gi|902219357|gb|KNA18295.1| (hypothetical protein SOVF_072190 isoform A [Spinacia oleracea]) HSP 1 Score: 208.0 bits (528), Expect = 8.000e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Spo07615.1 vs. NCBI nr
Match: gi|731374354|ref|XP_010666938.1| (PREDICTED: hit family protein 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 180.3 bits (456), Expect = 1.800e-42 Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 1
BLAST of Spo07615.1 vs. NCBI nr
Match: gi|296090671|emb|CBI41071.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 145.6 bits (366), Expect = 4.900e-32 Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 1
BLAST of Spo07615.1 vs. NCBI nr
Match: gi|731441097|ref|XP_003635468.2| (PREDICTED: histidine triad nucleotide-binding protein 1 [Vitis vinifera]) HSP 1 Score: 145.6 bits (366), Expect = 4.900e-32 Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 1
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072190 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 5.600e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072190 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 5.600e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7E9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_005570 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.200e-42 Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 1
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Match: A0A068U5V8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016452001 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 7.800e-29 Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 1
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Match: A0A022RKC7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013929mg PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.300e-27 Identity = 67/103 (65.05%), Postives = 81/103 (78.64%), Query Frame = 1
BLAST of Spo07615.1 vs. ExPASy Swiss-Prot
Match: HINT3_ARATH (Adenylylsulfatase HINT3 OS=Arabidopsis thaliana GN=HINT3 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.700e-27 Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 1
BLAST of Spo07615.1 vs. TAIR (Arabidopsis)
Match: AT5G48545.1 (histidine triad nucleotide-binding 3) HSP 1 Score: 121.7 bits (304), Expect = 2.700e-28 Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07615.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07615.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07615.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo07615.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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