Spo02049 (gene) | SpinachBase

Overview


Name	Spo02049
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	P0701D05.23
Location	chr1 : 22195904 .. 22196500 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAGTTTGGAGGTCTCAATGAAGGAGAAAATGGAGCCATTTCCAATGGCAAGGGTATTATCGTCCAAAGAAAATAATGAAACAGGGGAAACTTCTTTTAGGGTATATTACGGTGCAACTGGTGCAGCAGTACCTTTCATGTGGGAGTCACAACCAGGTACCCCCAAACACCCAATATTTGACAAAAATGTCAATTTTGTCCCTCCCCTTACTCCCCCACCTTCTTACTGTTATAGGGACGATCCATGTAAGAAAACCCGAAAACACAAAATCATTTTCCGTGCTTTTGTTTCCTCGATTACTTTTACTCGTAGTCGTAGTAGTACTACTTCTCGCTCCACCTCTCATAATGTGACCCCTACGTCATCATCATCGTCATCGTGGTCTACCTCGTCCACGAGCTCGACTTCGTCACCTCGATCACCGCCGCGAAGGAAGTCTCATAGGAGGAGCTTCTCATTCTGCTCCGTTAGGGAACCGCTTTTTGGTGAAGATGAGGCGGAGGAGGAGCAAAATGCGCGATCTATTGGTTCGGTGATGTGCTTTGGGTTTAAGAAGCAACAACAAGCGCGTGTGCGTTACTCTATGCAATAA

mRNA sequence

ATGCCAAGTTTGGAGGTCTCAATGAAGGAGAAAATGGAGCCATTTCCAATGGCAAGGGTATTATCGTCCAAAGAAAATAATGAAACAGGGGAAACTTCTTTTAGGGTATATTACGGTGCAACTGGTGCAGCAGTACCTTTCATGTGGGAGTCACAACCAGGTACCCCCAAACACCCAATATTTGACAAAAATGTCAATTTTGTCCCTCCCCTTACTCCCCCACCTTCTTACTGTTATAGGGACGATCCATGTAAGAAAACCCGAAAACACAAAATCATTTTCCGTGCTTTTGTTTCCTCGATTACTTTTACTCGTAGTCGTAGTAGTACTACTTCTCGCTCCACCTCTCATAATGTGACCCCTACGTCATCATCATCGTCATCGTGGTCTACCTCGTCCACGAGCTCGACTTCGTCACCTCGATCACCGCCGCGAAGGAAGTCTCATAGGAGGAGCTTCTCATTCTGCTCCGTTAGGGAACCGCTTTTTGGTGAAGATGAGGCGGAGGAGGAGCAAAATGCGCGATCTATTGGTTCGGTGATGTGCTTTGGGTTTAAGAAGCAACAACAAGCGCGTGTGCGTTACTCTATGCAATAA

Coding sequence (CDS)

ATGCCAAGTTTGGAGGTCTCAATGAAGGAGAAAATGGAGCCATTTCCAATGGCAAGGGTATTATCGTCCAAAGAAAATAATGAAACAGGGGAAACTTCTTTTAGGGTATATTACGGTGCAACTGGTGCAGCAGTACCTTTCATGTGGGAGTCACAACCAGGTACCCCCAAACACCCAATATTTGACAAAAATGTCAATTTTGTCCCTCCCCTTACTCCCCCACCTTCTTACTGTTATAGGGACGATCCATGTAAGAAAACCCGAAAACACAAAATCATTTTCCGTGCTTTTGTTTCCTCGATTACTTTTACTCGTAGTCGTAGTAGTACTACTTCTCGCTCCACCTCTCATAATGTGACCCCTACGTCATCATCATCGTCATCGTGGTCTACCTCGTCCACGAGCTCGACTTCGTCACCTCGATCACCGCCGCGAAGGAAGTCTCATAGGAGGAGCTTCTCATTCTGCTCCGTTAGGGAACCGCTTTTTGGTGAAGATGAGGCGGAGGAGGAGCAAAATGCGCGATCTATTGGTTCGGTGATGTGCTTTGGGTTTAAGAAGCAACAACAAGCGCGTGTGCGTTACTCTATGCAATAA

Protein sequence

MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTPTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCFGFKKQQQARVRYSMQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02049.1	Spo02049.1	mRNA

Homology

[Close]

BLAST of Spo02049.1 vs. NCBI nr
Match: gi|902235221|gb|KNA23815.1| (hypothetical protein SOVF_021180 [Spinacia oleracea])

HSP 1 Score: 382.1 bits (980), Expect = 5.900e-103
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


		  
Query: 1   MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI 60
           MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI
Sbjct: 1   MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI 60

Query: 61  FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT 120
           FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT
Sbjct: 61  FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT 120

Query: 121 PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV 180
           PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV
Sbjct: 121 PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV 180

Query: 181 MCFGFKKQQQARVRYSMQ 199
           MCFGFKKQQQARVRYSMQ
Sbjct: 181 MCFGFKKQQQARVRYSMQ 198

[Close]

BLAST of Spo02049.1 vs. NCBI nr
Match: gi|731316509|ref|XP_010695811.1| (PREDICTED: uncharacterized protein LOC104908389 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 194.5 bits (493), Expect = 1.700e-46
Identity = 131/212 (61.79%), Postives = 143/212 (67.45%), Query Frame = 1


		  
Query: 8   MKEKMEPFPMARVLSSKENN---ETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKN 67
           MKE M+PFP AR LSSKEN    ETGETSFRVYYG TGAAVPFMWESQPGTPKHPIFDKN
Sbjct: 12  MKENMKPFPRARALSSKENRGNVETGETSFRVYYGETGAAVPFMWESQPGTPKHPIFDKN 71

Query: 68  VNFVPPLTPPPSYCYR---DDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTP 127
            N +PPLTPPPSYC      DP KK RK+K +FRA   SI          +R +  +VTP
Sbjct: 72  DNILPPLTPPPSYCGSRTFGDPSKKGRKYK-VFRAIFYSI----------ARKSHSHVTP 131

Query: 128 TSSSSS--------SWSTSSTSSTSSPRSPPRRK-----SHRRSFSFCSVRE--PLFGED 187
           TSS SS        SWS+SSTSST SP++ PRRK     SHRRSFSFCS RE  PLF   
Sbjct: 132 TSSLSSCNSYSSPLSWSSSSTSST-SPQTSPRRKCNKARSHRRSFSFCSPREKSPLF--Y 191

Query: 188 EAEEEQNARSIGSVMCFGFKKQQQARVRYSMQ 199
           E EE++N     S MCFGFKKQQ     YSMQ
Sbjct: 192 EGEEDKNVEYSTSSMCFGFKKQQGC---YSMQ 206

[Close]

BLAST of Spo02049.1 vs. NCBI nr
Match: gi|590570020|ref|XP_007011231.1| (Uncharacterized protein TCM_045439 [Theobroma cacao])

HSP 1 Score: 92.0 bits (227), Expect = 1.200e-15
Identity = 72/170 (42.35%), Postives = 94/170 (55.29%), Query Frame = 1


		  
Query: 21  LSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYR 80
           L SKE +    +S RVYYG    AVPFMWESQPGTPKHP  D     +PPLTPPPSY   
Sbjct: 27  LMSKETS-MANSSCRVYYGGASGAVPFMWESQPGTPKHPCSDTT---LPPLTPPPSY--- 86

Query: 81  DDPCKKTRKHKIIFRAFVSSITFTR--SRSSTTSRSTSHNVTPTSSSSSSWSTSSTSSTS 140
              CK     K   +  + S  F R   R +  S S+S + T   SSSSS+S+ S+S   
Sbjct: 87  HSSCKSKSMQKTSMKPTLLSFIFPRLTPRKNHASPSSSRSST---SSSSSFSSRSSSLHG 146

Query: 141 SPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCFGFKKQ 189
           SP +P  +K  RRS+ F   R P+    + ++E+   S  S +CFG K++
Sbjct: 147 SPSAPRNQKFQRRSY-FSFSRSPVHNCIDDDDEEGLGSPTSTLCFGVKRR 185

[Close]

BLAST of Spo02049.1 vs. NCBI nr
Match: gi|255559637|ref|XP_002520838.1| (PREDICTED: uncharacterized protein LOC8259522 [Ricinus communis])

HSP 1 Score: 89.4 bits (220), Expect = 7.900e-15
Identity = 73/191 (38.22%), Postives = 102/191 (53.40%), Query Frame = 1


		  
Query: 3   SLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFD 62
           SLE+   EK       R++S + +     +S RVYYG    AVPF WES+PGTPKH  F 
Sbjct: 15  SLEIKKDEKF----FTRIMSKETS--MANSSCRVYYGGASGAVPFTWESRPGTPKHTSFA 74

Query: 63  KNVNFVPPLTPPPSYCYRDDPCKKTRKH--KIIFRAFVSSITFTRSRSSTTSRSTSHNVT 122
            N + +PPLTPPPSY Y     K  RK   + +F   +  +     ++S  S S+S + T
Sbjct: 75  DNTSNIPPLTPPPSY-YSTSKSKSMRKRTKQNLFNTIIPRL--MTKKTSHVSPSSSMSST 134

Query: 123 PTSSSSSSWSTSSTSST--SSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIG 182
            TSSSSSSW++ S+SS+  SSP +    KS +     CS     +G D+ +EE       
Sbjct: 135 TTSSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLELFS 194

Query: 183 SV-MCFGFKKQ 189
           S  +C+G K +
Sbjct: 195 SSRLCYGGKSK 196

[Close]

BLAST of Spo02049.1 vs. NCBI nr
Match: gi|596061941|ref|XP_007221127.1| (hypothetical protein PRUPE_ppa018358mg [Prunus persica])

HSP 1 Score: 86.7 bits (213), Expect = 5.100e-14
Identity = 68/171 (39.77%), Postives = 91/171 (53.22%), Query Frame = 1


		  
Query: 21  LSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYR 80
           L SKE       S RVYYG    A+PFMWESQPGTPKHP    + + +PPLTPPPSY   
Sbjct: 12  LVSKEEASMANASCRVYYGEAAGAIPFMWESQPGTPKHP---SSQSSLPPLTPPPSYSTT 71

Query: 81  DDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTP-----TSSSSSSWSTSSTS 140
               K+T  HKI  ++      F R RSS       ++++P      SSSSSSWS+SS+S
Sbjct: 72  QPNSKRT--HKITSKSKFLDTIFPRLRSSRKMLKPPNSMSPPSLSSASSSSSSWSSSSSS 131

Query: 141 STSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCFGFK 187
           S++   S      ++ +  F    E  + E +  E ++  S  S +CFG K
Sbjct: 132 SSNYSSSSASSLRNKGARKFYHKYEEDYDEHDHHESKSG-SPTSTLCFGGK 176

[Close]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWA1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_021180 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.100e-103
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


		  
Query: 1   MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI 60
           MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI
Sbjct: 1   MPSLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPI 60

Query: 61  FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT 120
           FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT
Sbjct: 61  FDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVT 120

Query: 121 PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV 180
           PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV
Sbjct: 121 PTSSSSSSWSTSSTSSTSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSV 180

Query: 181 MCFGFKKQQQARVRYSMQ 199
           MCFGFKKQQQARVRYSMQ
Sbjct: 181 MCFGFKKQQQARVRYSMQ 198

[Close]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D3Y5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g029940 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-46
Identity = 131/212 (61.79%), Postives = 143/212 (67.45%), Query Frame = 1


		  
Query: 8   MKEKMEPFPMARVLSSKENN---ETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKN 67
           MKE M+PFP AR LSSKEN    ETGETSFRVYYG TGAAVPFMWESQPGTPKHPIFDKN
Sbjct: 12  MKENMKPFPRARALSSKENRGNVETGETSFRVYYGETGAAVPFMWESQPGTPKHPIFDKN 71

Query: 68  VNFVPPLTPPPSYCYR---DDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTP 127
            N +PPLTPPPSYC      DP KK RK+K +FRA   SI          +R +  +VTP
Sbjct: 72  DNILPPLTPPPSYCGSRTFGDPSKKGRKYK-VFRAIFYSI----------ARKSHSHVTP 131

Query: 128 TSSSSS--------SWSTSSTSSTSSPRSPPRRK-----SHRRSFSFCSVRE--PLFGED 187
           TSS SS        SWS+SSTSST SP++ PRRK     SHRRSFSFCS RE  PLF   
Sbjct: 132 TSSLSSCNSYSSPLSWSSSSTSST-SPQTSPRRKCNKARSHRRSFSFCSPREKSPLF--Y 191

Query: 188 EAEEEQNARSIGSVMCFGFKKQQQARVRYSMQ 199
           E EE++N     S MCFGFKKQQ     YSMQ
Sbjct: 192 EGEEDKNVEYSTSSMCFGFKKQQGC---YSMQ 206

[Close]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Match: A0A061FSH6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_045439 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.500e-16
Identity = 72/170 (42.35%), Postives = 94/170 (55.29%), Query Frame = 1


		  
Query: 21  LSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYR 80
           L SKE +    +S RVYYG    AVPFMWESQPGTPKHP  D     +PPLTPPPSY   
Sbjct: 27  LMSKETS-MANSSCRVYYGGASGAVPFMWESQPGTPKHPCSDTT---LPPLTPPPSY--- 86

Query: 81  DDPCKKTRKHKIIFRAFVSSITFTR--SRSSTTSRSTSHNVTPTSSSSSSWSTSSTSSTS 140
              CK     K   +  + S  F R   R +  S S+S + T   SSSSS+S+ S+S   
Sbjct: 87  HSSCKSKSMQKTSMKPTLLSFIFPRLTPRKNHASPSSSRSST---SSSSSFSSRSSSLHG 146

Query: 141 SPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCFGFKKQ 189
           SP +P  +K  RRS+ F   R P+    + ++E+   S  S +CFG K++
Sbjct: 147 SPSAPRNQKFQRRSY-FSFSRSPVHNCIDDDDEEGLGSPTSTLCFGVKRR 185

[Close]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Match: B9S4B9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689170 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.500e-15
Identity = 73/191 (38.22%), Postives = 102/191 (53.40%), Query Frame = 1


		  
Query: 3   SLEVSMKEKMEPFPMARVLSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFD 62
           SLE+   EK       R++S + +     +S RVYYG    AVPF WES+PGTPKH  F 
Sbjct: 15  SLEIKKDEKF----FTRIMSKETS--MANSSCRVYYGGASGAVPFTWESRPGTPKHTSFA 74

Query: 63  KNVNFVPPLTPPPSYCYRDDPCKKTRKH--KIIFRAFVSSITFTRSRSSTTSRSTSHNVT 122
            N + +PPLTPPPSY Y     K  RK   + +F   +  +     ++S  S S+S + T
Sbjct: 75  DNTSNIPPLTPPPSY-YSTSKSKSMRKRTKQNLFNTIIPRL--MTKKTSHVSPSSSMSST 134

Query: 123 PTSSSSSSWSTSSTSST--SSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIG 182
            TSSSSSSW++ S+SS+  SSP +    KS +     CS     +G D+ +EE       
Sbjct: 135 TTSSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLELFS 194

Query: 183 SV-MCFGFKKQ 189
           S  +C+G K +
Sbjct: 195 SSRLCYGGKSK 196

[Close]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Match: M5XA27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018358mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.600e-14
Identity = 68/171 (39.77%), Postives = 91/171 (53.22%), Query Frame = 1


		  
Query: 21  LSSKENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYR 80
           L SKE       S RVYYG    A+PFMWESQPGTPKHP    + + +PPLTPPPSY   
Sbjct: 12  LVSKEEASMANASCRVYYGEAAGAIPFMWESQPGTPKHP---SSQSSLPPLTPPPSYSTT 71

Query: 81  DDPCKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTP-----TSSSSSSWSTSSTS 140
               K+T  HKI  ++      F R RSS       ++++P      SSSSSSWS+SS+S
Sbjct: 72  QPNSKRT--HKITSKSKFLDTIFPRLRSSRKMLKPPNSMSPPSLSSASSSSSSWSSSSSS 131

Query: 141 STSSPRSPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCFGFK 187
           S++   S      ++ +  F    E  + E +  E ++  S  S +CFG K
Sbjct: 132 SSNYSSSSASSLRNKGARKFYHKYEEDYDEHDHHESKSG-SPTSTLCFGGK 176

[Close]

BLAST of Spo02049.1 vs. TAIR (Arabidopsis)
Match: AT2G40475.1 (unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.500e-11
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 1


		  
Query: 24  KENNETGETSFRVYYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYRDDP 83
           KE+++   +S   YYG  GA+VPF+WE++PGTPKH +F +++  +PPLTPPPSY Y    
Sbjct: 20  KESSQVNSSSRIYYYG--GASVPFLWETRPGTPKHALFSESLR-LPPLTPPPSY-YSSSS 79

Query: 84  CKKTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTPTSSSSSSWSTSSTSSTS--SPR 143
               +  K        +I  TR   +  SR  S         S SWS++S+SS+S  S  
Sbjct: 80  SSGNKLSK------ARTIKQTRFVKTLLSRHVSR-------PSFSWSSASSSSSSSYSSS 139

Query: 144 SPPRRKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVMCF 184
           SPP +  HR    +   R   + +++ EEE  + S  S +C+
Sbjct: 140 SPPSKVEHRPRKCYSCSRS--YVKEDDEEEIVSSSPTSTLCY 162

[Close]

BLAST of Spo02049.1 vs. TAIR (Arabidopsis)
Match: AT5G01790.1 (unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.000e-9
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 1


		  
Query: 33  SFRVYY--GATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSY 78
           SFR+YY  GA GA VPF WES PGTPKHP     +  +PPLTPPPS+
Sbjct: 62  SFRIYYYDGAAGA-VPFEWESHPGTPKHP--SSELPTLPPLTPPPSH 105

[Close]

BLAST of Spo02049.1 vs. TAIR (Arabidopsis)
Match: AT3G56260.2 (unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.100e-6
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 1


		  
Query: 37  YYGATGAAVPFMWESQPGTPKHPIFDKNVNFVPPLTPPPSYCYRDDPCKKTRKHKIIFRA 96
           YYG  GA++PF+WES+PGTPK+ +   + +   PLTPPPSY Y        R    +   
Sbjct: 18  YYG--GASIPFIWESRPGTPKNHLCSDS-SLPLPLTPPPSY-YSSGILSTPRTQSKVRSK 77

Query: 97  FVSSITFTRSRSSTTSRSTSHNVTPTSSSSSSWSTSSTS---STSSPRSPPRRKSHRRSF 156
               ++F+     +  R ++H    T+SSS SWS++S+S   S+S P S  +R SH +  
Sbjct: 78  LSKFLSFSMF---SDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSPPHSLKKRMSHDK-- 137

Query: 157 SFCSVREPLFGEDEAEEEQNARSIGSVMC 183
                + PL   +  E+E  +    ++ C
Sbjct: 138 -----KSPLLYANYEEDELRSSPTSTLCC 152

[Close]

BLAST of Spo02049.1 vs. TAIR (Arabidopsis)
Match: AT1G06930.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-6
Identity = 54/156 (34.62%), Postives = 69/156 (44.23%), Query Frame = 1


		  
Query: 37  YYGATGAAVPFMWESQPGTPK-----------HPIFDKNVNFVPPLTPPPSYCYRDDPCK 96
           YYG + AAVPF WESQPGTP+           +   D N     PLTPPPSY Y      
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 97  KTRKHKIIFRAFVSSITFTRSRSSTTSRSTSHNVTPTSSSSSSWSTSSTSSTSSPRSPPR 156
           K    K     F S ++  RS              P+S +SSS S+SS+S  SSP     
Sbjct: 84  KHVSPKKTNTLFSSLLSKNRS-------------VPSSPASSS-SSSSSSVPSSPLRTSD 143

Query: 157 RKSHRRSFSFCSVREPLFGEDEAEEEQNARSIGSVM 182
             + RRS  F S     +G + A+      S+  V+
Sbjct: 144 LSNRRRSMWFESGSSLDYGSNSAKSSGCYASLVKVL 165

The following BLAST results are available for this feature:

BLAST of Spo02049.1 vs. NCBI nr
BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
BLAST of Spo02049.1 vs. ExPASy Swiss-Prot
BLAST of Spo02049.1 vs. TAIR (Arabidopsis)

BLAST of Spo02049.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235221\|gb\|KNA23815.1\|	5.9e-103	100.	hypothetical protein SOVF_0211...	[more]
gi\|731316509\|ref\|XP_010695811.1\|	1.7e-46	61.7	PREDICTED: uncharacterized pro...	[more]
gi\|590570020\|ref\|XP_007011231.1\|	1.2e-15	42.3	Uncharacterized protein TCM_04...	[more]
gi\|255559637\|ref\|XP_002520838.1\|	7.9e-15	38.2	PREDICTED: uncharacterized pro...	[more]
gi\|596061941\|ref\|XP_007221127.1\|	5.1e-14	39.7	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo02049.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RWA1_SPIOL	4.1e-103	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D3Y5_BETVU	1.2e-46	61.7	Uncharacterized protein OS=Bet...	[more]
A0A061FSH6_THECC	8.5e-16	42.3	Uncharacterized protein OS=The...	[more]
B9S4B9_RICCO	5.5e-15	38.2	Putative uncharacterized prote...	[more]
M5XA27_PRUPE	3.6e-14	39.7	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo02049.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo02049.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G40475.1	2.5e-11	35.8	unknown protein	[more]
AT5G01790.1	4.0e-9	63.8	unknown protein	[more]
AT3G56260.2	1.1e-6	32.8	unknown protein	[more]
AT1G06930.1	1.4e-6	34.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257	FAMILY NOT NAMED	coord: 19..197 score: 5.3
None	No IPR available	PANTHER	PTHR33257:SF5	EXPRESSED PROTEIN	coord: 19..197 score: 5.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009636	response to toxic substance
biological_process	GO:0010583	response to cyclopentenone
biological_process	GO:0010731	protein glutathionylation
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0006749	glutathione metabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0045174	glutathione dehydrogenase (ascorbate) activity
molecular_function	GO:0004364	glutathione transferase activity
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09460	0.72	Barchart \| Table
Spo11336	0.72	Barchart \| Table
Spo00538	0.70	Barchart \| Table
Spo13428	0.70	Barchart \| Table
Spo15244	0.70	Barchart \| Table
Spo03213	0.70	Barchart \| Table
Spo00754	0.70	Barchart \| Table
Spo16436	0.69	Barchart \| Table
Spo21716	0.69	Barchart \| Table
Spo27351	0.68	Barchart \| Table
Spo11995	0.67	Barchart \| Table
Spo15092	0.67	Barchart \| Table
Spo04387	0.67	Barchart \| Table
Spo03006	0.67	Barchart \| Table
Spo23067	0.66	Barchart \| Table
Spo23709	0.66	Barchart \| Table
Spo09321	0.66	Barchart \| Table
Spo01967	0.65	Barchart \| Table
Spo23921	0.65	Barchart \| Table