Spo24871.1 (mRNA) | SpinachBase

Overview


Name	Spo24871.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Calcium homeostasis regulator CHoR1
Location	chr3 : 53068378 .. 53072133 (+)
Sequence length	882

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGTCACTCTCTCTCCTCCCAAAATCTCAGCCAAACACTCGTACACCACCACCATCACCACCACCACCCACAACAACCGCACTTTCCATCAAATCATAAACAATTCCATAATAAACACACGAAAATTCAAAATAAATGAGAGAAACAACAACAATTTCCCAGTAATTCGAGCATATATCGAAAACAGCAACCCATTTACCAATTTCGCAAACAAAGTGATCGGTTCATTACCCATAGTTGGTCTTATTGCTAGAATTGTTAATGATGAAGGTGGGGTTGCTGGGGATATTATTGATTTTGCAGAATTTAGAAGGAGAGTTGGTAATAAGTGTTCTGTCAATGATTCTAGAGCTTTCTATGAGTTTCAAGATCGCCGTGGCCGGGTAATAATGTTTTTGTTTATCTTATACTCCCTCTATCTCAGATTTTGATTATTGATAATAGTTAGGTTAATAGTGTAATTTGAACTCGTAATGTTTATTAATAACAGTCATATTAATAGTGTAATTTGAAGTAGTAATGTTTGTTAATAGTAGTAATAGTGTAATTTGAACTAGTAATGTATAATTAAGATTTTGATTATTTTAATAGTGGGGTTGATAGTGTAATTTGAAGTAGTAATGTATAATTAATGTTTATTAATAGTAGTCGCGTTGATAGAGTAAATTAACCTAGTAATGTTTAGTGTAATTTGAACTAGTAATGTGAGTACCTAGTTTGCATTTTGGATGTTATCCTGTTTTTGTTGTAATCCCATCTGTTGGAAATTTGTTGATTAATAGTTATGTTGACGGTGTAATTTGAGCTAGTAATGTGACAATTAAATCGGGGAGAAAGGATTACCTCATTTGCATTTTGGATTACCAGGGTTATCCTGTTTTTGTTGTAATCCCATTTGTTGATTAATAGTCACGTTGACAGTGTAATTTGAACTAGTAGTGTGACAATTAGACCGTGAGAGATAGGAGTACCTCATTTGCATTCTGGATTACCATGGTTATCATGTTTTTATTATAATCCCATTTGTTGTTATATTTTCTTGGTTGGGAATTCGTTGATTTAATCACGTTGATTGTCTAATTTGAACTAGTAACGTGACAATTAAATCGGAGAGAAAGACTCATTTGCGTTTTGAATTACCCAGGTTATCCTGTTTCTATGGTAATCCCATTCGTCATTATATTCCCTCGGTTAGGAATTTGTTGATTAATAGTCACGTTGATAATGTGACAATTTGAACTGGTAATGTGACAATTAAACCAGGGAGAAAGGAGCACCTAGTTTGCATTTAGGATTACCAAGATTATCTTGTTTCTAATTGTATTCACATTTGTCCTTAGGTTGGTAATTCGTTGAGTAATAGTCACGTTTGATAGTGTAATTTGAACGGGTTAGGTAATACTTCTTGCTAGGTAGTTGTAGTTAATTGGTCATTTTTCCTTTTTACTTCGTAATTATTTACTTCTAGAATTATGCATTTTCCCCTTAATATAAGGAGAAAAATGTGAAATGGATCACCAATGAGCATTACAATACCCTTTGGTGCAGTGCCGAAGTTCATCTAAATTTTTTTATACAATTATGGGTGGTGATTGTGGCTTGCTATTGATAGGCGGGGGAGCCATTACACGTTCTACTGTGCTGTTGGTTAGCAGCACTTGGTGCAGGTCTTCTTAAATCCGAAGAAATTCTAGAGGGAGTTGCACGCCTTCGTCTTTCAAACGATGTCGAGTTCGAAGAACAGACTTTTATTGCTAAGATGACTGAAGCAAAAGAGGCAAGTGAATACTACTACTATTAGACTACTTATTTTGTGTGTACTTGTGTTTCCTATTTGTAATTCTAAGACATTTTTCTTAACCTTGTTGTCCGTCTGAAAATAATGGTCGAAAACTTACAAACCAATTTATCAGTCCAGAATTAATAGTCACCTTTCATATGTTGTAGAGGTCTATGATAACATCTCCCAACATTGCATAACTTGAATAAAAGGGGTGGTGAGACTATAGAAATGAGTTGAGACAATGTAGAAGGCGTCGCCGTCAATGGCGGGTCTGGAACAGTTTTACGAGGGGCCCAGTAGAAAAAATTAAGCAATATACTATGTAATTTATACCATTTTACACAAATTTTATGGGGGGCGCTAACTAAAAGTACACTACAAAATTTTCCGCCCGGAAGGGTCGGGCCCACCCCATGCTTAACTAACATCCGCCACTGGTCACTGGAGTTTAATTAACCAGTCTTTTTGTAAAATCATATCTTATCCTTGGGTTTGACCGTTTGAGACAATGTGAAATAGTCATACACTATGCTAAATTTAGTGGTCAAAACTTGGTCTCTAACTCAGTATAACACAGACATCAGTTGGCCTTTGTTTCTTGAGATGCAATGAATGATTGTTGAGAAATACTGGACAGTTTGTTACTTCAGGTTCTGACAATTGTGCTTTCGTGAACTCGTTGTGCATTAATTTTCTGCTTTAGCAAAACCTAGGCATGGCAAAATTGGATGAAATTTGGCTTTTGAGAACACAAAAAAGGAAGCATCGCTCGAAAAATGTTGTTATTTTCATTTCATAGATTAGGTTACCCAACTTTGTAACTGCAAGATCACTAGGTAAGTAATGTTCAAGAATGGTGACCAATCAATGGAAAGACAAATTTTCTATGTTTTCAAAGAGGAAACTTTGCCGTTTATGATCCTTCAAGTTGCAATCTATGTCATTCCAAGTGTGTCGATGTAACAGTTTGAAATCTGGCATCTTTAAGTTTCTAGGAGTCTGAAACATGAGGCATTGAGATGAATTGCAATGTCCAATAGGGGATTATCAGTTTATTCCTGTTTGAATCTTTTCGAACGTTTTATATGTGAACGTTTTCAAATGCTTTCAAAAGGAAACTTGGTTGAGTAAAACAATCTATGACCACCCATTTATGTAAGTGTACTTTTTTTTTTTGGGTTTAGAAAGAGCCACAAAGGGCAAGCCGGCAAATGGTGTAGTCTGAATTCGATCCCAGGTCTTGTCTTGTGTACTACCCCTCAGTTTCCACTTTTTGGTTTTTGATTTTACAAGCCATATGACTTATATTAAATCATGAACTAAAAAATAATCATACTTGTAGTAATCATGCTGAAAACTAATAACAAAAAACTGAAAACTACCTTTTTTGTAGTTTTGTAAAAAAACAGAAATTGAAAACAAAAAACGATACCGAACGGGCCCATAGTTGGCATCCACAGGTTTACAAGTTGATACTCCGTACAAATTTCTAGTGATTATAGAGATAGATTTTAACCTAACTTGGAGATTGGTATCATAGGAAGTTGAAAATTCAATTTTAATTTAATGTTCTTGTAAAATACTTGTAGTATGCACTTGAAATTTGATGCATTTGCACTTGCCATTGACACTGTATCAGAGAAGAGCTAAACTGAATGCTGCAACACCCAAAATCCCAATGGAATTACGAGCTGAGAAAGCTCTCGATGCTATATACGTTTGTTGCTTTGACAAGGATTTGATCGAAGAAGAAGATGAAAAATTACTAGTCACGATTCTTAGAGCGGTGTTCCCTAATGTTCAACAACCGGAGGTTGAAAGAATCATCAAAGATAAAGCGAAAAAAGTTGCAGAAGGCGGTGAGGATGAAGACTTTCCTGTAGAGCCTAAACCATTGACTAAGGAAGCGGTACAGTTACAGATGAAGGATCTCCGGTTCCTGCAGCAGAACAGCATCGATGGTAGTTGA

mRNA sequence

ATGGTAGTCACTCTCTCTCCTCCCAAAATCTCAGCCAAACACTCGTACACCACCACCATCACCACCACCACCCACAACAACCGCACTTTCCATCAAATCATAAACAATTCCATAATAAACACACGAAAATTCAAAATAAATGAGAGAAACAACAACAATTTCCCAGTAATTCGAGCATATATCGAAAACAGCAACCCATTTACCAATTTCGCAAACAAAGTGATCGGTTCATTACCCATAGTTGGTCTTATTGCTAGAATTGTTAATGATGAAGGTGGGGTTGCTGGGGATATTATTGATTTTGCAGAATTTAGAAGGAGAGTTGGTAATAAGTGTTCTGTCAATGATTCTAGAGCTTTCTATGAGTTTCAAGATCGCCGTGGCCGGGCGGGGGAGCCATTACACGTTCTACTGTGCTGTTGGTTAGCAGCACTTGGTGCAGGTCTTCTTAAATCCGAAGAAATTCTAGAGGGAGTTGCACGCCTTCGTCTTTCAAACGATGTCGAGTTCGAAGAACAGACTTTTATTGCTAAGATGACTGAAGCAAAAGAGAGAAGAGCTAAACTGAATGCTGCAACACCCAAAATCCCAATGGAATTACGAGCTGAGAAAGCTCTCGATGCTATATACGTTTGTTGCTTTGACAAGGATTTGATCGAAGAAGAAGATGAAAAATTACTAGTCACGATTCTTAGAGCGGTGTTCCCTAATGTTCAACAACCGGAGGTTGAAAGAATCATCAAAGATAAAGCGAAAAAAGTTGCAGAAGGCGGTGAGGATGAAGACTTTCCTGTAGAGCCTAAACCATTGACTAAGGAAGCGGTACAGTTACAGATGAAGGATCTCCGGTTCCTGCAGCAGAACAGCATCGATGGTAGTTGA

Coding sequence (CDS)

ATGGTAGTCACTCTCTCTCCTCCCAAAATCTCAGCCAAACACTCGTACACCACCACCATCACCACCACCACCCACAACAACCGCACTTTCCATCAAATCATAAACAATTCCATAATAAACACACGAAAATTCAAAATAAATGAGAGAAACAACAACAATTTCCCAGTAATTCGAGCATATATCGAAAACAGCAACCCATTTACCAATTTCGCAAACAAAGTGATCGGTTCATTACCCATAGTTGGTCTTATTGCTAGAATTGTTAATGATGAAGGTGGGGTTGCTGGGGATATTATTGATTTTGCAGAATTTAGAAGGAGAGTTGGTAATAAGTGTTCTGTCAATGATTCTAGAGCTTTCTATGAGTTTCAAGATCGCCGTGGCCGGGCGGGGGAGCCATTACACGTTCTACTGTGCTGTTGGTTAGCAGCACTTGGTGCAGGTCTTCTTAAATCCGAAGAAATTCTAGAGGGAGTTGCACGCCTTCGTCTTTCAAACGATGTCGAGTTCGAAGAACAGACTTTTATTGCTAAGATGACTGAAGCAAAAGAGAGAAGAGCTAAACTGAATGCTGCAACACCCAAAATCCCAATGGAATTACGAGCTGAGAAAGCTCTCGATGCTATATACGTTTGTTGCTTTGACAAGGATTTGATCGAAGAAGAAGATGAAAAATTACTAGTCACGATTCTTAGAGCGGTGTTCCCTAATGTTCAACAACCGGAGGTTGAAAGAATCATCAAAGATAAAGCGAAAAAAGTTGCAGAAGGCGGTGAGGATGAAGACTTTCCTGTAGAGCCTAAACCATTGACTAAGGAAGCGGTACAGTTACAGATGAAGGATCTCCGGTTCCTGCAGCAGAACAGCATCGATGGTAGTTGA

Protein sequence

MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAYIENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFYEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMTEAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQPEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24871	Spo24871	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24871.1	Spo24871.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24871.1.exon.1	Spo24871.1.exon.1	exon
Spo24871.1.exon.2	Spo24871.1.exon.2	exon
Spo24871.1.exon.3	Spo24871.1.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24871.1.CDS.1	Spo24871.1.CDS.1	CDS
Spo24871.1.CDS.2	Spo24871.1.CDS.2	CDS
Spo24871.1.CDS.3	Spo24871.1.CDS.3	CDS

Homology

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BLAST of Spo24871.1 vs. NCBI nr
Match: gi|902236460|gb|KNA24398.1| (hypothetical protein SOVF_015490 [Spinacia oleracea])

HSP 1 Score: 565.8 bits (1457), Expect = 4.300e-158
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY 60
           MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY
Sbjct: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY 60

Query: 61  IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF 120
           IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF
Sbjct: 61  IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF 120

Query: 121 YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT 180
           YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT
Sbjct: 121 YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT 180

Query: 181 EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ 240
           EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ
Sbjct: 181 EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ 240

Query: 241 PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS 294
           PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS
Sbjct: 241 PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS 293

[Close]

BLAST of Spo24871.1 vs. NCBI nr
Match: gi|731340241|ref|XP_010681289.1| (PREDICTED: uncharacterized protein LOC104896271 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 417.9 bits (1073), Expect = 1.400e-113
Identity = 220/293 (75.09%), Postives = 256/293 (87.37%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNN--NFPVIR 60
           MV+TLSP ++SAK+SY TTI T  HN    HQ INNSI N+RKF+I   +N   N  +I+
Sbjct: 1   MVLTLSPTQVSAKYSYITTINT--HNTLNLHQFINNSI-NSRKFRIPTTSNGGTNISIIK 60

Query: 61  AYIENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR 120
           AYIEN++P +NFANKVIGSLP++GLIAR+VNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR
Sbjct: 61  AYIENTSPISNFANKVIGSLPVIGLIARMVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR 120

Query: 121 AFYEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAK 180
           AF+EFQ+RRGRAG+PL+VLLCCWLAALGAGLLKSEEILEGVARLRLSND+EFEEQTFIA 
Sbjct: 121 AFFEFQERRGRAGDPLYVLLCCWLAALGAGLLKSEEILEGVARLRLSNDIEFEEQTFIAM 180

Query: 181 MTEAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNV 240
           MTEAKE+RAK+ A  P IPMELR EKALDAIYVCCF KDLIEE DE LLVT++ AVFP V
Sbjct: 181 MTEAKEKRAKVKAGAPTIPMELRVEKALDAIYVCCFGKDLIEERDESLLVTMISAVFPTV 240

Query: 241 QQPEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSID 292
           +QP++ERI+K+KAKKV+EG E + F VEPK L+KEA+QLQMKDL+FL+QNS +
Sbjct: 241 KQPDIERIVKEKAKKVSEGTEGDLF-VEPKLLSKEAIQLQMKDLQFLKQNSTE 289

[Close]

BLAST of Spo24871.1 vs. NCBI nr
Match: gi|225452478|ref|XP_002274527.1| (PREDICTED: uncharacterized protein LOC100266403 [Vitis vinifera])

HSP 1 Score: 367.1 bits (941), Expect = 2.900e-98
Identity = 198/292 (67.81%), Postives = 240/292 (82.19%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERN---NNNFPVI 60
           +VVT++   +S+ H  T  + TT+H   +F  ++N+  I T   K        +N    I
Sbjct: 2   VVVTVNSTALSSSH--TPHLHTTSHKPSSF-SLLNSLQIYTNPTKPTRSRPPYSNGALSI 61

Query: 61  RAYIENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDS 120
           R+Y+E++N  ++ AN+VIGSLPI+GL ARI NDEGG+ GDIIDFAEFRRRVG KCS+NDS
Sbjct: 62  RSYMEDNNSLSSLANRVIGSLPIIGLAARIFNDEGGLGGDIIDFAEFRRRVGKKCSINDS 121

Query: 121 RAFYEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIA 180
           RAFYEFQDRRGRAG+PL+VLLCCWLAA+GAGLLKSEEILEGVARLR+SND+EFEEQ FIA
Sbjct: 122 RAFYEFQDRRGRAGDPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEQNFIA 181

Query: 181 KMTEAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPN 240
            M EA+ERR+KL AATP IPME+RAEKAL+AIYVCCF KD IEEEDE+LL  IL AVFP+
Sbjct: 182 IMNEARERRSKLRAATPTIPMEIRAEKALEAIYVCCFGKDPIEEEDERLLQIILLAVFPS 241

Query: 241 VQQPEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNS 290
           VQ+PE+ERI+KDK+KKVAEGGED ++P EPK L+KEAVQLQMKDL+FL+QNS
Sbjct: 242 VQKPEIERIVKDKSKKVAEGGEDNNYP-EPKALSKEAVQLQMKDLQFLKQNS 289

[Close]

BLAST of Spo24871.1 vs. NCBI nr
Match: gi|568832245|ref|XP_006470347.1| (PREDICTED: uncharacterized protein LOC102623220 [Citrus sinensis])

HSP 1 Score: 362.1 bits (928), Expect = 9.300e-97
Identity = 190/288 (65.97%), Postives = 234/288 (81.25%), Query Frame = 1


		  
Query: 2   VVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAYI 61
           ++TLS  + + +   +T     + +   FHQI +++    RK   +  N     V +AYI
Sbjct: 1   MLTLSSLQTNLQAQISTCCKQISPSLILFHQIQSSNPARLRKLPSSSSNGGVLSV-KAYI 60

Query: 62  ENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFY 121
           EN N  +NFANKVIGSLP++GL ARI++DEGGV GDIIDFAEFRRRVGNKCS+NDS+AFY
Sbjct: 61  ENQNSISNFANKVIGSLPVIGLFARILSDEGGVGGDIIDFAEFRRRVGNKCSINDSKAFY 120

Query: 122 EFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMTE 181
           +FQ+RRGRAG+PL+VL+CCWLAA+GAGLLKSEEILEG ARLR+SNDVEFEE+TF+A   E
Sbjct: 121 DFQERRGRAGDPLYVLICCWLAAVGAGLLKSEEILEGAARLRVSNDVEFEEETFLAAKNE 180

Query: 182 AKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQP 241
           AKERRAKLNA TP IPM +RAEKAL+AIYVCCF K+L+EEEDE+LLVTILRAVFP V+QP
Sbjct: 181 AKERRAKLNAVTPTIPMAIRAEKALEAIYVCCFGKELVEEEDERLLVTILRAVFPTVEQP 240

Query: 242 EVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNS 290
           E+ERI+K+KA+KVAEG ++ + P E KPL KEAV+ QMKDL FL+QNS
Sbjct: 241 EIERIVKEKARKVAEGSDETNVP-ESKPLPKEAVKQQMKDLEFLKQNS 286

[Close]

BLAST of Spo24871.1 vs. NCBI nr
Match: gi|567908327|ref|XP_006446477.1| (hypothetical protein CICLE_v10016148mg [Citrus clementina])

HSP 1 Score: 362.1 bits (928), Expect = 9.300e-97
Identity = 191/288 (66.32%), Postives = 234/288 (81.25%), Query Frame = 1


		  
Query: 2   VVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAYI 61
           ++TLS  + + +   +T     + +   F QI +++    RK   +  N     V +AYI
Sbjct: 1   MLTLSSLQTNLQAQISTCCKQISPSLILFPQIQSSNPTRLRKLPSSSSNGGVLSV-KAYI 60

Query: 62  ENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFY 121
           EN N  +NFANKVIGSLP++GL ARI++DEGGV GDIIDFAEFRRRVGNKCS+NDS+AFY
Sbjct: 61  ENQNSISNFANKVIGSLPVIGLFARILSDEGGVGGDIIDFAEFRRRVGNKCSINDSKAFY 120

Query: 122 EFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMTE 181
           +FQ+RRGRAG+PL+VL+CCWLAA+GAGLLKSEEILEG ARLR+SNDVEFEE+TF+A M E
Sbjct: 121 DFQERRGRAGDPLYVLICCWLAAVGAGLLKSEEILEGAARLRVSNDVEFEEETFLAAMNE 180

Query: 182 AKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQP 241
           AKERRAKLNA TP IPM +RAEKAL+AIYVCCF K+L+EEEDE+LLVTILRAVFP V+QP
Sbjct: 181 AKERRAKLNAVTPTIPMAIRAEKALEAIYVCCFGKELVEEEDERLLVTILRAVFPTVEQP 240

Query: 242 EVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNS 290
           E+ERI+KDKA+KVAEG ++ + P E KPL KEAV+ QMKDL FL+QNS
Sbjct: 241 EIERIVKDKARKVAEGSDETNVP-ESKPLPKEAVKQQMKDLEFLKQNS 286

[Close]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015490 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.000e-158
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY 60
           MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY
Sbjct: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAY 60

Query: 61  IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF 120
           IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF
Sbjct: 61  IENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAF 120

Query: 121 YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT 180
           YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT
Sbjct: 121 YEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMT 180

Query: 181 EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ 240
           EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ
Sbjct: 181 EAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQ 240

Query: 241 PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS 294
           PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS
Sbjct: 241 PEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSIDGS 293

[Close]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3V6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g140250 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.000e-113
Identity = 220/293 (75.09%), Postives = 256/293 (87.37%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNN--NFPVIR 60
           MV+TLSP ++SAK+SY TTI T  HN    HQ INNSI N+RKF+I   +N   N  +I+
Sbjct: 1   MVLTLSPTQVSAKYSYITTINT--HNTLNLHQFINNSI-NSRKFRIPTTSNGGTNISIIK 60

Query: 61  AYIENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR 120
           AYIEN++P +NFANKVIGSLP++GLIAR+VNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR
Sbjct: 61  AYIENTSPISNFANKVIGSLPVIGLIARMVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSR 120

Query: 121 AFYEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAK 180
           AF+EFQ+RRGRAG+PL+VLLCCWLAALGAGLLKSEEILEGVARLRLSND+EFEEQTFIA 
Sbjct: 121 AFFEFQERRGRAGDPLYVLLCCWLAALGAGLLKSEEILEGVARLRLSNDIEFEEQTFIAM 180

Query: 181 MTEAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNV 240
           MTEAKE+RAK+ A  P IPMELR EKALDAIYVCCF KDLIEE DE LLVT++ AVFP V
Sbjct: 181 MTEAKEKRAKVKAGAPTIPMELRVEKALDAIYVCCFGKDLIEERDESLLVTMISAVFPTV 240

Query: 241 QQPEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSID 292
           +QP++ERI+K+KAKKV+EG E + F VEPK L+KEA+QLQMKDL+FL+QNS +
Sbjct: 241 KQPDIERIVKEKAKKVSEGTEGDLF-VEPKLLSKEAIQLQMKDLQFLKQNSTE 289

[Close]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Match: F6HV00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01380 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.000e-98
Identity = 198/292 (67.81%), Postives = 240/292 (82.19%), Query Frame = 1


		  
Query: 1   MVVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERN---NNNFPVI 60
           +VVT++   +S+ H  T  + TT+H   +F  ++N+  I T   K        +N    I
Sbjct: 2   VVVTVNSTALSSSH--TPHLHTTSHKPSSF-SLLNSLQIYTNPTKPTRSRPPYSNGALSI 61

Query: 61  RAYIENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDS 120
           R+Y+E++N  ++ AN+VIGSLPI+GL ARI NDEGG+ GDIIDFAEFRRRVG KCS+NDS
Sbjct: 62  RSYMEDNNSLSSLANRVIGSLPIIGLAARIFNDEGGLGGDIIDFAEFRRRVGKKCSINDS 121

Query: 121 RAFYEFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIA 180
           RAFYEFQDRRGRAG+PL+VLLCCWLAA+GAGLLKSEEILEGVARLR+SND+EFEEQ FIA
Sbjct: 122 RAFYEFQDRRGRAGDPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEQNFIA 181

Query: 181 KMTEAKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPN 240
            M EA+ERR+KL AATP IPME+RAEKAL+AIYVCCF KD IEEEDE+LL  IL AVFP+
Sbjct: 182 IMNEARERRSKLRAATPTIPMEIRAEKALEAIYVCCFGKDPIEEEDERLLQIILLAVFPS 241

Query: 241 VQQPEVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNS 290
           VQ+PE+ERI+KDK+KKVAEGGED ++P EPK L+KEAVQLQMKDL+FL+QNS
Sbjct: 242 VQKPEIERIVKDKSKKVAEGGEDNNYP-EPKALSKEAVQLQMKDLQFLKQNS 289

[Close]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Match: V4U1H3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016148mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 6.500e-97
Identity = 191/288 (66.32%), Postives = 234/288 (81.25%), Query Frame = 1


		  
Query: 2   VVTLSPPKISAKHSYTTTITTTTHNNRTFHQIINNSIINTRKFKINERNNNNFPVIRAYI 61
           ++TLS  + + +   +T     + +   F QI +++    RK   +  N     V +AYI
Sbjct: 1   MLTLSSLQTNLQAQISTCCKQISPSLILFPQIQSSNPTRLRKLPSSSSNGGVLSV-KAYI 60

Query: 62  ENSNPFTNFANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFY 121
           EN N  +NFANKVIGSLP++GL ARI++DEGGV GDIIDFAEFRRRVGNKCS+NDS+AFY
Sbjct: 61  ENQNSISNFANKVIGSLPVIGLFARILSDEGGVGGDIIDFAEFRRRVGNKCSINDSKAFY 120

Query: 122 EFQDRRGRAGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMTE 181
           +FQ+RRGRAG+PL+VL+CCWLAA+GAGLLKSEEILEG ARLR+SNDVEFEE+TF+A M E
Sbjct: 121 DFQERRGRAGDPLYVLICCWLAAVGAGLLKSEEILEGAARLRVSNDVEFEEETFLAAMNE 180

Query: 182 AKERRAKLNAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQP 241
           AKERRAKLNA TP IPM +RAEKAL+AIYVCCF K+L+EEEDE+LLVTILRAVFP V+QP
Sbjct: 181 AKERRAKLNAVTPTIPMAIRAEKALEAIYVCCFGKELVEEEDERLLVTILRAVFPTVEQP 240

Query: 242 EVERIIKDKAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNS 290
           E+ERI+KDKA+KVAEG ++ + P E KPL KEAV+ QMKDL FL+QNS
Sbjct: 241 EIERIVKDKARKVAEGSDETNVP-ESKPLPKEAVKQQMKDLEFLKQNS 286

[Close]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Match: A0A067LDQ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09612 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 9.400e-96
Identity = 181/259 (69.88%), Postives = 219/259 (84.56%), Query Frame = 1


		  
Query: 30  FHQIINNSIINTRKFKINERNNNNFPVIRAYIENSNPFTNFANKVIGSLPIVGLIARIVN 89
           FHQI +N    TR+  +N   +N F  ++AY+EN N  ++FANKVIGSLP++GL+ARI N
Sbjct: 27  FHQIYSNCRRPTRQKVLN---SNGFLSVKAYMENPNSISSFANKVIGSLPVIGLVARIFN 86

Query: 90  DEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFYEFQDRRGRAGEPLHVLLCCWLAALGAGL 149
           DEGGV GDIIDFAEFRRRVGN C++NDSRAFYEFQDRRG+ G+PL+VLLCCWLAA+GAGL
Sbjct: 87  DEGGVGGDIIDFAEFRRRVGNNCTINDSRAFYEFQDRRGKVGDPLYVLLCCWLAAVGAGL 146

Query: 150 LKSEEILEGVARLRLSNDVEFEEQTFIAKMTEAKERRAKLNAATPKIPMELRAEKALDAI 209
           LKSEEILEG ARLR+SND+EFEEQ FI+ M EA+E+RAKL  ++P IPME+RAEKAL+AI
Sbjct: 147 LKSEEILEGAARLRISNDIEFEEQNFISLMNEAREKRAKLKVSSPSIPMEVRAEKALEAI 206

Query: 210 YVCCFDKDLIEEEDEKLLVTILRAVFPNVQQPEVERIIKDKAKKVAEGGEDEDFPVEPKP 269
           Y+CCF KD IE EDEKLL  +L AVFP+V+QPE+ERI++DKAKKVAEG ++ + P EPK 
Sbjct: 207 YICCFGKDPIETEDEKLLTLMLSAVFPSVKQPEIERIVEDKAKKVAEGSDEVNVP-EPKN 266

Query: 270 LTKEAVQLQMKDLRFLQQN 289
           L KEAVQLQMKDL FL+QN
Sbjct: 267 LPKEAVQLQMKDLEFLKQN 281

[Close]

BLAST of Spo24871.1 vs. TAIR (Arabidopsis)
Match: AT3G55250.1 (unknown protein)

HSP 1 Score: 326.2 bits (835), Expect = 2.000e-89
Identity = 175/282 (62.06%), Postives = 219/282 (77.66%), Query Frame = 1


		  
Query: 20  ITTTTHNNRTFHQII---------NNSIINTRKFKINERNNNNFPV-IRAYIENSNPFTN 79
           +   TH + +FHQI          N S  ++ + K++      F + IRAYIE  N F+ 
Sbjct: 1   MVVVTHISTSFHQISPSFFHLRLRNPSTTSSSRPKLD----GGFALSIRAYIEKPNSFST 60

Query: 80  FANKVIGSLPIVGLIARIVNDEGGVAGDIIDFAEFRRRVGNKCSVNDSRAFYEFQDRRGR 139
           FANKVIGSLP++GL+ARI++DEGGV  D++DFAEFR+RVGNKC+ +DSRAFYEFQ RRG+
Sbjct: 61  FANKVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGK 120

Query: 140 AGEPLHVLLCCWLAALGAGLLKSEEILEGVARLRLSNDVEFEEQTFIAKMTEAKERRAKL 199
           AGEPL+VLLCCW+AA+GAGLLKSEEILEGV R+ +SND+EFEEQ FIA MTEA++RRAKL
Sbjct: 121 AGEPLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKL 180

Query: 200 NAATPKIPMELRAEKALDAIYVCCFDKDLIEEEDEKLLVTILRAVFPNVQQPEVERIIKD 259
           N   P IPMELR EKAL+ IY CCF + LIEEEDEKLL  +L AVFP+V++ E+ERIIK+
Sbjct: 181 NIDAPTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKE 240

Query: 260 KAKKVAEGGEDEDFPVEPKPLTKEAVQLQMKDLRFLQQNSID 292
           KA +V EGGE+E+  V  K L KEA+Q+QMKDL FLQQ +I+
Sbjct: 241 KATRVEEGGEEEN--VMAKRLPKEAIQMQMKDLEFLQQQNIE 276

The following BLAST results are available for this feature:

BLAST of Spo24871.1 vs. NCBI nr
BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
BLAST of Spo24871.1 vs. ExPASy Swiss-Prot
BLAST of Spo24871.1 vs. TAIR (Arabidopsis)

BLAST of Spo24871.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902236460\|gb\|KNA24398.1\|	4.3e-158	100.	hypothetical protein SOVF_0154...	[more]
gi\|731340241\|ref\|XP_010681289.1\|	1.4e-113	75.0	PREDICTED: uncharacterized pro...	[more]
gi\|225452478\|ref\|XP_002274527.1\|	2.9e-98	67.8	PREDICTED: uncharacterized pro...	[more]
gi\|568832245\|ref\|XP_006470347.1\|	9.3e-97	65.9	PREDICTED: uncharacterized pro...	[more]
gi\|567908327\|ref\|XP_006446477.1\|	9.3e-97	66.3	hypothetical protein CICLE_v10...	[more]

BLAST of Spo24871.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RY61_SPIOL	3.0e-158	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C3V6_BETVU	1.0e-113	75.0	Uncharacterized protein OS=Bet...	[more]
F6HV00_VITVI	2.0e-98	67.8	Putative uncharacterized prote...	[more]
V4U1H3_9ROSI	6.5e-97	66.3	Uncharacterized protein OS=Cit...	[more]
A0A067LDQ7_JATCU	9.4e-96	69.8	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo24871.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24871.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G55250.1	2.0e-89	62.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36770	FAMILY NOT NAMED	coord: 1..292 score: 2.5E
None	No IPR available	PANTHER	PTHR36770:SF1	CALCIUM HOMEOSTASIS REGULATOR-RELATED	coord: 1..292 score: 2.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus