Spo25031.1 (mRNA)

Overview
NameSpo25031.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L38
Locationchr3 : 13972778 .. 13991210 (+)
Sequence length1038
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATTCCACTGTAAAAGACTAAGAGCCCAAATATTTTTTGGTAGCAATATCTCGAATGTGTTAGCCCAAAAATGATACCACCACTACTAGAAAAGCCCAAACAATAGAATGTTCACAGTTTATCAACCCTTTCTCTCTCCTTTATTAGGGTTTTAGCTACACAACTGCGCAACTTCGGCATTTCCCTTCTTCCCAGTTCTCCGCCTTTCAACCACCATGGTGAGCTCTCTCTCTTTCTCTATCGTCTTTCTCCGCACTGATTTGTTCTTACTTTCATTCGTATTATTGTGATTTGATCTCCATTAATCTGTTTTCTTTTTCTGTGAATTTGTCTGCTGCAATTTTCAACTTCAACTTGCCTTTTTCCTTTTTGATTTTTCTTGTTAGTGTTTAGTTTTTGCTCATAGAATTTCTTTGAATTTGCGAATAATGTGATATATGATGTCTGTAGAATCATTTGTTCAGAATCGAGTATTGATGAAAATAATGACATTGTATGATTAATTTAGATTTTGAATATTTGAACGAAATTTTTCTGTATTGTGAAATTAGAGCGGTTGAATATGTCTTATAGGTGATATGCTAGCTCCGTTTACTGGTCGATGGTGGAAGAATTTTTCCAGGGTATTTGAAAAGTGAGATTTTTGCTGTGTAGATATTATAAATTTATAAACATATTAGGGGTAGTTGTTATTCTTACTTTCATTAATTCCATTTTCTTCCTCTTCCTTGGTTTGATTTGGTCACAATTAAGGTCTCCTATGACGATTCATGTTAGCCGACTGACTAAGGCTTTGTTGTTGTATTAGGGGTAGTTGTTAATTTGAATCACTAGTGTCCTAGTTGATGTGTTGTGTGGCAAAACGTGATTATATGGTGTTTGGTAACTGTTGGGTGATTGTCTATATGGACTGATTTTGGGATGTATGTTGAAATGCAGCCGAAGCAGATTCATGAGATAAAGGATTTCCTTCTGACTGCCAGAAGGAAAGATGCACGTTCCGTGAAGATCAAGAGAAGCAAGGATGTTGTCAAGTTCAAGGTCCGTTGCTCCAAGTATCTTTACACTCTCTGTGTCTTTGACAATGAGAAGGCTGACAAGTTGAAGCAGTCTCTTCCTCCTGGTTAGTCCCTCTTTTGATTTCCTGCCCTGAATTTACTCTTGTAGCATTCTTGGTTGCACATTATGATGTTTATTGAGTTATGATTGTACAAAGATTAATTCTTTGAGGAAGTTGGATCGTACTTTAATTGTCTATATCATTGCCATTGTGAAATACCCGCAAAAACTACCATGATCACCTTCGATGTGGTTGTTTTGCTAATGGTGGTTGATTGCCTTCTTCTCAGAATATTACTACTTATTATCTGTTCTTGGTTGTGTAACATATTGGTCACCCTAGTTTTAGTATACGAATGTTGGAGTATTACTTCAATATTTATCATCTGTTGGCATTTTCTCCTATTGATTTTTAAGAGTGGATAAGAGGGGAGGGAGCAAAGTGGCATTCCGTAGCATTAGATGACAACAAAATGAAATGGCCTTGAAAATTGAATGAGTGTTTCTGGTCAATCATATTGTATGTTAATGTTGTGTTCTGATGGAACATGTCGTGTGAACGTACATTAGTTTCCACACTGCTTAGTATGAAAGTAGGACACTTGTACAGGATAAGACATTATTATGTATGAATGTATGGTAATGAGATTAACTTTAGTTCAAGGACATTGCTAAAAGTGAAATTTGTGATTAAGGGAGACCAACAAAACCTTTCTTGTTCCCTAGATGTTACTTTGATGGTTTGGTTGTTATCAATCTGGTTTTGATTCCTTTTTTTCCGATTTATTTGGCAGGTTTGAGCGTCCAAGATCTTTGAGCAAGTGGAGTTGCCGTTCTCATATAGTAGCTGTTAGGCAATTGAAATCAGTTGTTTTTGTTTTGTCAAGCTTTGCAATTAGTGCAATGATTTGTAATCCTTTTAATCGAGTTGCATACTTGCTTGAAAGATATGATTTTGGCCCCTAAACTTTATTTTATGACCATATGTTATTTTTACTCATATTTCCAGTTTATTGATGATTCCTTGCTTTTGATTGTGAATGTGGTGTGTTGACCAGTGGTAAAGGCTCTTTATTCACCTCTTATGTTATTTTGCATTATAATTTCCAATCCTGGTTTACAGTGAGAGCTGTGTAGTACTCTGTATTGGAGATTTCTAGCAAAGTAGAGATCAAACGCTGGGGTTGTACAGAAACAGCATTAATTTTGCCATATTTGTTGTTTTACGTTTAGCTTCAACAGCATCAGGGCAAGCAAGGAAGTGCTTATATTTGGTTCAGAAGTTGAAAAATGGTAAACACAGCAACACAAGGGATTCCGAAATCTTGAGTTTGCAAATACGAGTGATTCTGAAAAATGGTAAACACAGCAACACAAGTGATTCCGAAAAATGGTAAACACAGCAACACCCTAGTGTTTTTACATGCTTTTTCAAACGCTTGAATTCTGTCTGATACATACGTTTATTAGGCTTTTCATTAGTGTTATTAAGCACTCTTTTATCCTCATAGCTGCTGAGGTACCACAATTGTGAACCTATAAATCACTTGGTTTGTGGTCCTAAAAAGGTCGAAAATTATGACTGATTTATTAAACATTCATAATGTTTTTGACTTTTGGTACATGTTTAAACAGCAAAAACGTTTCAGAACACTCAAAAGAGTTGTGGGTAGCTGAGTTTTTGAAGGACTTTATGTACCATATACTACTCTATAAGTCAAAATCCTATTTTGGCCTATACTTTCTTATGGATGTTGCCAAATCTTTTTTTGGTGTGGGTTGTTATTCTAACAAACATTCAGGGTTGTTAATGATACAAATATGAAACAATAACTTCTACTCCATTTGTCGGAATCAAGGTTGTTTAAGAATATTGAAATACTACCTACGTCTAAAATCTGTACATTTAAGGATGTCCTCGAAAATCTGTCACGTTCTTAAAATTAGTTCTGTTTTGTTAATCAAATTTCAAAACATGCCTAGCTCTGTAAGTTATTGATGAGTAAACGATATTAATAAAGCACCTATTATAAAGGATTATAATCATGTTATGTCCTTAATTGTAAGAGGTTGATACAATGATGCAAACGAGCATGAGTGGTTCTGAGCATGTGTAAGGTGGGCGACTGTATAAGACCCTAAAAAAAAAGGAAGTCTTAAAATTGACACTTTGTATTTCGTTATGTTATTTTCACTATATACAAAAAGAAATTAAGTGATTCGGTGGTTAATTTTTTGGATTTTGGGATGTCCTACTCGTTTAATCTTCATCTTTTTCATAAAATTTATAATTTAGTAAACTTCGTAAAATAATTTTCGTAAACTTTTGTTGTTAATAAAACTAGTTTTATGGCTCGTGCGACGCACAATATTTTTTTATTAATCAAATTAGATAATGATGATATAAAAGTTGAAGGGGCAATGAACTAAATAATCAAGCATTGATTAATTGAACTTTTAAGAATGTTAAAAGTTTTTCTATTAAATATTTAGGGAGAATTGTACAAAATAAGTTAAAATATATAAAAATAAAAGAGATTTTAAGGTGGTGACAACTAGACATGACAAATGGGTCGTTTGGTTCGGGTTCGGATCGGGTCAATTTGGGTCACTTTCACTTCGGATCGGGTACGGGTATGGGTCGGGTCCATTCGGATTTTGGGTTTAATTTGGTAGATCGGGTCAATATCGGATCGGGTCATTATTGGTTCGGTACATTTCAGATCAGATCATATCAGATTGGATTTTTTCGGTTTAGTTCGGATATTTTCGGGGTAGATCAGATTTTTCTTGTTTAATTTCAAGTTTTGATTTGGCAATTTCGCTTTAGATTTGGTCACCATTCATAAAATATTCAATTATGATATATAACAATATTTTTACAAAATAATTAAGGAATAAGCGTATACAGTTCGAGATTACTGGTTTACCGTATGGAAATTTTAGTAAATGATAAAGGTTACATTTTCACATTGTTACAAGTGATAATTTAGGCGACTCTAGTCTTTCTTCTACTAATGTATGGCCGAGAAGACGAAACATGAAATATGGACAAATATAATAATATATATTGGTGATTAATAAAAGATTATCTTGATTTAGTAAAGTAACTAGTATTTGAGACCAAACTCTCGAATTATTTCATAGATAATGTGTGGTTATTAATGATAATAATAATAATAATCATAATAATAATAATAATAATAATAATAATAATAATAATCTTGATCAGCGACAAATGCAATCTTGATTTCATGGCTTGGTACCTCGACGACGGTACCATTATTGGGGACACTGCTTTGGTTTCTTCGGCTTTGCAGGTGATTACTTCTGAGGGTCCGGCATTGGGGTTGCATTTAAATGTTGAGAAAACGGAAATCTTTTGGCCAACTCCTGATTCGAGGAGCTACGATTCCACACTTTTCCCTCCTAGTATTGCCCGCCCCAGGGGTGGAGTCAAGCTTCTGGGTAGCCCAGTTAGCTTGAAGGCTAACTTTTGTAGCCGTTTGATAGAGGACAGGGTCGCTAAGACTGTGGGTTTGATGGAGGCCGTGGCTGAGCTTAATGATCCTCAACCGGAGCTCCTTCTTCTGCGGTGTTGTGTGGGAGTTAGTCGTCTATACTTCTCTTTACGGACTTGTCCGCCGCATATGCTCGGGTCTGCTCCTATTTCCTTTGATCTCGCCTTACGGAGGGTTCTTCAGGATATTATTGTGGATGGTGGTGCGGGCTTTGGAGATTGGCAGTGGCGGTGTGCCACTCTACCTTTTCGGTTGGGTGGTTTCGGGGTCTACACCGCGCAGGATTCTTCCGCATGTGCTTTTGTTGCCTCTCGTCTCCAGTCTCTTGGTCTCCAGAACAGACTGCTTGGGCATGGTGGTGACTCTGTTTTGGGCCTTGCTTGTGATTTAGCTTTAAATAGCTTTCGGGATTTGTGTCATTTCGATCCTCTCGATCTCTGCCGTGTGGTACCAGCCCCCCGTTTATGAAAAAGTTGGCTACAGTGTACTTTGCTATGGTAGAGAAGAAGATGATGGGACAGCACAACCCGAGTTCCAGAGAAAAGGCTATACTCATTAGCAACCGAGCGGCACACTCCTTAGACTTCTTGAGTGCCCTCCCAATTGAGGGGTTAGGGCAGACGATGCACCCAAGACAATTTAGGTGTGTTTTGTGTTATCGCCTTGCGATTCCTATGTTCCCTCCTGACTTTACTTGTCCTTGCTGCTCTTCGAAAGTCATAGATCGTTTCGGGGATCACACAGTGCATTGTGGTAATGATGTTGGCCTAACAACAACAACAACAACAACAACGGCAGTTTCTCCGGCAGTTTAGGGCGGTTAATCCGGCGGTTCGGGGCAGTTTCGGCGTTCACTTTCAGGCTCGGAATTCGCAGGCGTTTTCAGGTTGGTTTCCACGGTTTTTGGGTGCAATTTTCAGCGGTTTTTGGTCAGTTTTCAGGCAGTTCTGGGGCACTATTCAGGCGGCTTTCCGGTGCAATTTACAGCAGGTTTGGGTCTAGTTTTCAGGCGGTCTTGGGGCAGTACTCAGGCGGTTTTCCGGTGCATTTTACAGCAGTTTTTGGTCCAGTATTCGGGCGTTTTCGGTGCAATTTTCAGGCGCTTTCGGGGCAGTATTCAGGCGGCCACGGTGTGCGGTTGTGCGGTTCTGTGGGGTTGTGCGGTTCAGTGTGGCAAGTGTGCGGTTTCGGGGCTGTATTCAGGTCTGGTTCGTCGATTAAGTTCGTTGGCAGTCAGGTTTTCAGTGTGATTGTTGCTGCAGTGTTGGTGTGATTGTCGGTGTTGGTGTGATTGGTGGTGTTGGTGTGATTGGTGCGTGGTGGTGGTGTGTTGATATTGTTGAGGTCAGAGGGTGTATTGTTTCAGTGTTATTTTAGTGTCGCGTTGTGTTTGGTGGCATTGTGTGGTTGGTGCATTGTGAGGTTGCGTTTCTTGGTGGAGGTTACAGATTCAGTGCGGTTGAAATGCTTTGATATGGCGGCTTCCGTGGAGAAGTTTCATTGCCCTTTTGTGGGTCTTAGCGGGTGCCAGGATGGAGGTGGGCGTGGTATGGTAAGGAGTTCTCTGATCACTCACTTACGGGATCGTCATTGTTGCTCTGGTGTGCGGGATGTAACCCGTCATTCCCTTACTACCAATTTGCAGGTTTTTTCTACGGCTGAGGTGACCTTTCGTCGTATGGGAATTTGGCTGTGTGGAGATTGTTTCAAGACACATACTCATCGTACTAGGTGTCGACATGGCAGTGGTTCTAGTACTGTTTTTGTGGACCCACCTAATTATGGGGATGGTATTATTCGTTTTATTCTCTACGGTATTCAAAAGCCTCAAGCTCCTACTGCCGAGCTGTCTTCTTCTGTTGCGCCTCGAGAACATCATTTTTCTTTTGATGTTGCTCTTCTAGACACTTTATTGTCTAAGCGGTTGCGTTCTGTGAAATCCATCCCTCCCAAATGTCGTTTGGGTTTTTCGCGAGTTCTAAAAGGGGCGCTTGATAAGGTGATTTGCAGACCAGATGACATCGCTTGTTGGGTTCAGTTGCTCGTGTTGCCTCTTTGTGTGCTCTCGACTTTTTCTCCGCAAAGTAATCGTGAGTGTTCCTCTGGTGTTAGGCGGCGACGACAGGAAGAGAGTATCACCTCTACTATTCGTTCTTGGGGTGAGCCTGGTGGTTCTGAGCAACTTGTCATCAACACATTGGCCAGCGTGTCTCCATTGGATGTTGACGAAGACCATGATTTGGCGGAGCGTAATATTAAGCAATGCAAGAGAAAGATTTCTGACGGTCACTACACTGCTGCTGTTAGAGTTCTTTCGTCCTCAGGTCTTGCCCCTTACAGTGATGCTACTCTGGCAGATTTGCAAGCAAAACAGCTTCCTTTCCGGTCCCTACCTTACCGGATATCCCTGTTGATCATCACCTTGCTGCTACCTCCGCTGTTGTGTTGGAGCAGATTAGGGGCTTTCCGCGGGGTACTTCGTGCGGTAGAGATGGCTTGCGTGCTCAACACCTTTTGGATTGCTTGGGTGGTGCTGCTGTAGCTGTTTCTGATGAGTTGGTGGATGCTATTACTCAGGTAGTTAATCTCTTTCTTGCTGGCAAGTGACCTGGTGAGCTTGGAGGATATATTGCTAGTGCTCCTCTTACGCCACTTGTTAAGCCTGGTGGTGGTATTCGGCCTATTGCTGTGGGCACTATTTGGAGGCGCCTTGTTTCTAAGGTCGGGGCTGCTTTGATTGGTCCGCGTTTAGGAAACTACTTCGGAGGGCTTCAGTTTGGAGTTGGGGTTCCAGCAGGTGGTGAGACTATTCTCCATGCTGTCAATCGCTTGGTTGAGCCTCGTGGGGCTGATGTTGGCCTCTCTATGTTATTGGTGGATTTTCGGAATGCGTTCAATTTAGTTGATCGATCGGCTTTGTTGCGTGAGGTTCGGCTACATTGTCCTGCTCTTTCGCGTTGGGTTGAATTCTGCTACTCTTCTCCAGCGCGGCTGTATTATGGGGAGCATACCTTGTGGTCTTATCAAGGTGTGCAGCAAGGGGATCCTCTCGGCCCTTTGCTTTTCTCTCTGGTTCTACATCCACTGGTGGTCGAATCAGAGACTCTTTTGATCTATCTCTTCAGGCTTGGTACTTGGACGATGGCACTATCGTTGGTGACACTTTGGTGGTTGGAAAGGTCTTGGAGTTGATTTTGGAGGAGGGTCCTCATTTAGGTCTCCATGTTAATGTTGAGAAGACAGAGGTTTTCTGGCCTTCATAGAACCCACGCAGTCGTCTAGAGGGTGTCTTTCCTTCGGATATTGCTCGTCCTGCGCTTGGTGTTAAGTTGCTTGGTGGTCCAGTCAGTACGGATTCCTCTTTTTGTAAGGAGTTGGTTTCGCAGCGTGTGTCGAAGACTGTTGTGTTGATGGATGCTGTAGCTAAGCTTAATGATCCCCAGTGTGAGTTGTTGCTTCTTCGTGCGTGTACTGGAGTTTCTAAACTCTACTTTGCTATGCGCACTTGCCCGCCTCATCTTTTCGAAGCGGCCCAATTATCCTTTGATGTGGCTCTTCGGGCTTCTTTAGAGCGTATCGTGACTGCTTCGGGACCTGGGTTCGGTGACTGGCAATGGCGTCTTGCCACCTTGCCTTATTCTTATGTAGGATTGGGTGTTTATTCAGCTGGTGATGTTCGGCATTATGATTTTCTTGCATCCCGTTTGCAGTCTTCTGGTTTGCAGGATTCGCTTCTTCGGCTTTCAGGTGTTGATGGTCGGGGATCGGCCTTTGATGATGCTCTTGGTCTTTTCAATAGGACCGTGGATACCGACCTTATGAGTAGCCCTAGTGAGATCGCTGCCCCCACACTCATGAAGAAATTGGCAGACATATATTTCACGAAGGTTACTGCTGATGCGGTATCCGCCTACTCCTTATCTTCACGTCATGTTGCCTTATGGAAATCACAGCAGGGGGATCACTCCTCAGCTTGGTTGCGGGCAATCCCCATCTCAGGTTTAGGCCAGACTATGAACGGTAAGACTTATCGTTCGGTTCTTTGCTATCAGTTGGGTATTCCGTTGTTCTCTGATTCGACGCCGTGTTCTGCTTGCTCTCGGGTTTTTGATGGGGACATTTATGGGGATCATGCCGTGTCTTGTGCTGGAATTGTGGGTATCAAACATCGACATAATGTTGTTCGTGATACCCTTTTGGATATTTGCTATCGGTCGGGGATTTCTGCTCGCAAGGAGGTTGATGTTGGGCTGACTAGTGAGGGTGATGAAGCTCTTCGTCCTGCAGATATATTGCTTTATTCATGGGATGGCGGTCTAGATGTGTGTGTTGACTTGACTGGGTCTTCCCCTATGACGCAATCGGGGTTGTCAGGCTTCGTTCCGGGTCGGGTTGTGGCGGTTGCAGCGCAGCGGAAGCTGGATAAGTATGTGGCACGTTGTAGGGCTTTGGGTTACGGTTTCTTTCCTTTTTCCTTCTCTTCTTTTGGGGAATTAGAGAAAGGGGCTGTTTCTTTGCTGAAGCGGGTCCAGACGTACTCCAGGGCTCAAGACATTGGGGACGGACAGCTGCCCACATTTTCAGCAGGATCGGGTTCGCCATAGCTAGAGGAGTGGGGGCCCAGATTGTATCTCGGCTCCCCTCCAACTTCTTGTAGTTCACTTGATCTTTGTAGCTTGTTAAGCTTGTAACGTTTTGGTATTTTCTCATAATATATAATAATAAATAAATAAATAAATAAATAAATAATAAATACATTATTAATAATAATAATAATAATAACATTAATAATAACAATAATAATAATAATAATAATAATAATAGTTAGAAAACTTGTGTTATTTAGTTTGAACTAATGATAAATTTGAGTTGTTCTTCGGTTCGGATTGGTTTCTGATCTTCAGTTCAGACCGATTTTGGGTTGACTCAAATTTTACAGTTATTTTCGGTTCGGGTTACTTTGGTTTCGGATGAAACTTGGTACGGGCTAATTCGGTTCGGGCCGATTCGGGTATCGGATCATTTCGGGTTAAAATCAATTTCGGATCGGTTTTAGTTTCGGTTCGGGTAAATTTGGGTTTCGAGTTGATTTTGGGTCGTCATTTCGGGTCAAAATCGAGTAATGGATCGGTTCATTCGGACCGGGTCCGTTTTTCCAGGCTAGTGACAACTGACAAGTGTTATGCAAATCTTCTTGCTTTAAAATATTAAAATAGATAGTGTTCATCTTTAAAACAAATAAATTAAAAACCCAATTTAAAAAATTAACACGGGATATATGTCATTGTAAGCGTTTTTAGTCCGACCCCTCCATAAATAAGTCCTAATCCAGTACCACTACCACTACCACTACCACTACCACGTCTAGAAGAGCGTCATTCACAAAATTGGACACGGGACAACTTACTAAGTTGGTTCTCAGTAGCTTATTATATCCAACTCAATTGAAATGACATCACTTGTAAAGTGGCAAAGAGATGATGAAGAGGAATGGGTGAAAGACGGAAGTTGTTTGGAGTGATTAGATCTATTCAACTAATTAATTCAACTAATTAATGTAACTTAGGAGAACACCGTCGGTGGTAATTATGATTGATCTTGGAGGACCCATTTTTATTTGTAATTTATTTATTTTTGCCATCATATCGGATTGAGAATGAATTTCATTAATAATTTTGTGTACCATATGTTTAATTAATTAATATTTTTGTTTAGTATTCTTTCTTTGATGTTGAGTTTTTTTTGGCGCACCAAAGATGCCACCATCATCTTGGGTTGCTTTGCGTTTATTGCAACATCCGAGGACACACACACTTAACATAGTTTAAAGGTCTTGGGTCATTTTACAATTAAGTCTCATACGTGTAGCTTGTGTGAAACTTTATAATCAATTCAACTAGCTAATATTAATCAATCTGTGTCAGGTCAGAAGAATATAGAATTAGATTCATTACTTAGATTAAACATTCATTACTTACATACAATTACTTATCATTACTTAAAGTTAGATTCATTACATAGTTTAACCATTCATTATTTAGATTTATTCACATGGGTCGAATATCTCATATGGAGTCTTTCGTGTCTGATTACTTGATCCAAAACAATTTTAAGATCTTTGTAAATAGATCTTAATATCCAATATGGTCCATCATTGATAAATAATTTCAGATCTAAGTCATTAGCATTTGAATGTTATTTCGCAATAAAGAGATATGTGTGATACACATAGGACTAATCTAATTTTACGTACTTCCACTAAACTTCTTATATATCTATAATATTCATGTACATTTTATGAAACTAAAATACTTATTAGTTTCACTAAAATACAGTTCCAATTCCCAATTTTCTTGCTTAAATCCATGCTTGGATTTCATAAGCTAACATCCTTTTTCAAGCATTAATTGGATCCATAAATCATATGACATGCCATATACATAGTTTCTTCCAAAATTTAATTGATGAATACGTTTTGTCATCCAATTGTCATATGTACCAATATGCAACCATTGCTTGATTTATAGACATGAGCATTTCGATTATGCATGAGGTTTCAACACAATCAGCGCCGTGAATTTTCTTGTAACCTTTAGCAACTAATCTAGCTTTGTGCTAAAACACGATTTCATATTTGATGGTTTTTACCCTTAAAACCAATTTACAGCCAATAGGTGTAAATCCATTCTTGCAAATCAACAAAATTTCAATATTGTCATCAAAACACTGAGTTTGTTTTATGGCAGTCACAAACTCATTACTCTTCATGGTAATAGTTTGACTGCAAGTTGTAGGTTTCTTCACCATCTAATAGAAGAATCTTATATATAGTTTCAGTGACCTGAACTCTATGCCTACATGGGTATAGAACATCAAACAATAGAATATCAATATCCACATTGAAAGTCCTTTGAATGTTCTATTCTCCTTGAAACACTTGTAAAGTCTTCGGGATATCTTTAAAGCCACTTCTAACGTCCTTAAAGAATAAGTGTTCGGATTTTCTGAAAAACTTTAAAAGCCTTCAGAATGTCCATTTATTTTTGTTGTTTGCCTCGAAGACTTTCGAGGTCTATTTTCTCCCATTTGTCATTTTTGAAACGAATATGCAAAAGGACACTATTTCGACCAAACCAAGATTATGTTCTCAAAATTCGTGGTAGAAATAATACCCTTGTGTATCATTTGAATAAATCACAATGAAACATACATCAATACTTATGCCTTAGTTTGTTGAATAACAAACACTAAGCTCCCACTGAGTTTAGGAACTCTTAGATGTATATTATGGAAAGATATTCTGAAATTACTTTTCAATAACATTGACGAATTTGGTTTAGTGTGATGGTAGTTTAACATCTTATTTAGAAATTATAGGAAAAGTCTTTATGATTCATCATTGATCGAATCAAGTACCAATTGAATTCGATAATTCCAATTTAGACATACCATATCTTGTGGAGTTTGATCGTGAAATTACAACACACAATCACTGGATGACCATCCTTGGTTTAAGTAATCATCAACGTGATCTAAGATAGATCTTATGATTTCTTGCCAAATGGATTTTATACTTCTCTATGAACCTTTGAACTAGTCAACAGATTCAATATCACATTGAGTAAATAAATCCATATTCACTCAAACCCAGGTGAAATAATAAAGTCATAAAATCTTTCTTTAGCTTTGAACTATGTTGTCTAGGAGTTCTAACAATAGTTCATTTCTTTTGTTACCTGTAACAAATAAGACTAGCTTGTCTTGAAGATCTAGAAAGCACTCAACTTTCAAAAGTCCATCAAAATGGAGATTTAGAATGTTAACTTGTTGATATCATCTAAGCAATAATGCCAAACATTAGTGGCACTCAAATCAAGAGATTGATTTGTACCTAGTAAAGTTTTGTTGTTTAAAGAGTTGTTTGTTTTAATCAAGCATACATGACTCAACCCTCAAATGACTATTTCATTCAAACAAACATACAAAAGTTGTTTTTGTTTTCTTTGAATGTGAGGCTTTTTATGTTTGAAACAGAAATTTAGGTATGCCGATAAAGGAAAAAAATAACCATTAAATTCCAACCTTGAAAGGACTTAAAACAAACTAGATGACCCTACAACTAATGTAGCAATGTCATGCTTTATTTCCCACTTGTAGGTCATTAGTATAGTCTAGCTTCCATCGTTTGAGTCATTACTGAAGTAAGAACCTCAAGGTATTTGAAACCAAGGAAGTTTGATTGCTAGGTCACTTATCTTTAAACATAAACTTGTAGGTAGAAAAGAAATTGTAAATTCCTTTCACTTGTTCCTTGTTTTCCTATTTCTTATACCTTTTTTTATAGTCTTAAGATTTAGCTTCTCAAGTGTTGACTTTTATACTTTGTTAGACATGTCTAATGTCATTTCAACAAAGTTCTTACCATTTCATTCGTATTGAACATTTGCTTCAACTAGATAATCTCACAAGAAGATTCTAAAGTTCTCTGAGTATCGATCTATTCGAATGTCTATTAGATAGATTCATTTGAGAAGTAAATGTACAAAGATAATTTGGTTGTTAACCATTGGTAAACTTGAGTCTTTTTACTCAATGATTCATGATTCCAAAATTACATTGTATTTTTAATTTCATTAAGCACCAAATGGTTTCCATTCGAATTCACTAGTAAAAAACAACCATAAAAGTCTCTATAAGAAACGTACATTTTAAATTGGTCAGTTTCTCTCATTTCCGTGAGTCGTTCTTGGATTCACGGCCAATCGAGGAAACTTACTATTAACTCTGTAAAAGGATTTATTGCAGTGAAGGATATTTAATTAAAAATACTAATTAAAAATACATTGAAGCATGCAAAGTCTAAACATTTATCATGAGTAATAACTTGAAAAAGAAAACATGCAATTTTAAACAAGCTAATGAGCATTTTATTTGAAATATTTAGTTCCGGCGGGTGTGAATAAAATGAGTCCAAGATCCTCAAAATCATTAAAAAAAATAAGCATGATTTGGCTTGTTTTAATCATAAAACATTTTAGGTAAGAAAATCATTTGCTAATAGTCTAAAAACTACTCTTGGTTGATAGGTACGTCTAAGAACTTATTAGGAAAACTGGCCTAGCTATCTCATTTGCCATGACATGAAAGGACTTCTCACTTATATCGTTGAGTTCAACCAAAATCAACTTGTACTCACAACTAATTATGTACCTTAACCTTTTTCGATCAAGAAGTGACACCTCATTTTGACGGAAAACTATCACTAATCGATCGAAAAATGTACTCACAACTAATGGTGCACCTTACCCTTTAGGATCAAGAAGTGACACCTTTCTTTGGCGGAAAACTATCACTAATTGATCTAAAGGAAAAAGTAAGTGTTATTTTGGAATGACACATTTTAACTCAATTTGAAGTTTAAAACTTAAGGCTTTACTATGTTGGTTGGATTTTAAGTGAACTAAAATCTTTAAACATGCAACATATTCAAGACACATTCTCATGCATCATTCAAGACATATTCAACTTCATCTTGAATCTTGGACTTCAAACTCCGTCTTGAAAATGGAGTTGAACCTTCATACTTGAACTTCAATATAGGAGGCGCCATTTTCATCAAATAGGGATTGCAAAATTAAAATAGCTAAAATAATTATTACAACATGCTAACGGTGTGCATACCGTATTTAAATAAAACTTATGGTGCTTTAGACTATATTTTACATTCAAATATTATGGTTCGCATACTATATTTTCTATCCTATTTGGGTCATACTAGTCACTTTCCGAAACCTGCAAAATAATATATATGCAATATATATCATTCACTCATTCATTTATCAATGAAATACTTAGCAAGTCAGCAACAAAACACATCACATAATATTTGCAACAACTAATTAAGGCTCAAGAATCTACCAATTATTTGACCTTATTAGTTCTAATCAAGTTGTTAATCCTAAGGAAATAAGGACCTAATCAAGGATAAATGAAATTTAACTAATCATGAATTAAAGCTCCCATTCAAACGAAGAATTATATGTTTTACTAACTTTAAACATATTTTTCCTAGTCCAACCTGAAACCACAAGTTTTAATTAAAATTTAAAGCTCATATAATAATTATTTTAAATCCCATTATTTGATAATTAGTTTATTAAAATAAATTTATTATAATTTATTCAAAGTTTTAATTTTATTAAATAATTAGTATAATATTAATTAAAATAGTAAAATTTATAAAATTAAATTCCGAGAAAAAATTACGAGCACGAATATAAAATTAATTAAGTTCGTCGCTCAACGAAAAATCAAAACCGCACGTACGCGCGCAATGGCCCAAGCCATAACACGAGTGTGCATGCTGCCAAGGCAGGCCCATGGGCGCAGCGCCCATGCATCGCCAAGGCAGAAACATTATGAATGGCCATGGCACGAAGCCACACCATCCAACAGCAACGCGCGAGCTGGCTTGGTGCCATCGGTCGCTGGGCATGCAAACAACGCGCAACACGCACACGAGCTCCCTTGTTCGTCGTGTCGCTCGATCATTGCTCGCTTATGATTGCTGCCTTCGCCTCACACGTCCACTTGCACAGCCGCACACACGGGACACAATTAAACAATGCTCGCACACCGCCCGCGCCCTGCGCCCTTGCATACCGTACATGCACCGCACACCCACACAAGCTCCCTTGCTCGCAGGTTGTATGTGCGCACCATAGCAGCAACGCCCATGGGGAGCTTATACGCCTTTGGCCCTTGCGGCCTCGTTCGTATACTCAAGCTTGTGAACGTTTTTATAAAATCGTAAACTCATGAAAAATAAATAAATCGTACAAATTTCATGAATTTTTAGGCGAAAAAATCAAAAATTTATAAATCAGTTAATTTTTTATTACATGAATATTTGGGATTAGAATTAGGGTTCATAAAATTTTAAAAGTTTCAACTTTTAACAATTTTATGTGGTCTTTTAATCATTAGATCCCAATTAAATTATCAGTTAATTATTAAAAATCGAATCAAAATTCCAATTTATTAGAAAATTAAACAAATTAATTATAATTACAAATTAGGTAGTATAATAAACTAATTTAATTCTTAAAATTGTTAATCATATGAAGTAGGTTAATTATTATCAAGAATTACACACAAAATTTGCAAATATCAAGAATTGCCGTCCATCCGTAGATAGTCCACATCACGTTCAGATCCACCTTAAATTTGACCAACTAGAATCTCAGTATAAGGTATAAGGAATTCGGGATCTCACTTTAATGGTGATAGGTAAAGTATGAAAACCAGTGGCGGTGCCAGTACGGGTTTAGTGGGTTCAACTGAACCCGTACTTGCAAAAACAAAAAAGAAGGTTAAGTTTCTGAACTACCGGGATTAACCTTTATGTATAATTTAGCGCTCAAACATGGCAAGAAGTGAATAATGGATCATTGGTTTGAGGGAGGAATGTTGTATGTGAGGTCGCGTGTTTGACTCCCAGCAAGAAATATTCTTTGACATTTCATTTTTTTTCTTTTCCTTCGTCGTAGCAATAGTTTTAAACTTCTAATAAATAATTTTTTTTACACATTCCTATTACTAAATGTCTTTCAAAATTTGAAAGTTATCCAATGCTCTAGCAAAAATTGGATTTTGTTTTTATTCCTTTTCTTTAAAACTTTTTCCTTTAATTATTTATTTTATGTACTACTGACGTATGAAACCTTTTATTTGCCCCTAAAAAATCAATAAAATCTGCTAATGTACTCTCTGCGCACAAAAAATATTACGTATGTTTTAATTTCGAACCCTTAACACAAAATTCCTGGTACCGCCACTGATGAAAACTCGTGTGTATTCTATGTACATAGAACACATATACATAGGAAATAGGAAAACCTTAGGATACCAAAACCCTAGCCCTAGGACCAATCGGCCAACCTAAGCTTGTGGCCCAAGTTACTTGATGCGCAAGTAAGCTTGGCGCCCAAGCTCAATGCACAACCCAAGCGCTAGCGCTGGCCGCAGCAGCGTTGCACGCTCTGGGCCTTGTGCCTTGTGCGCTCCGCTTATGTTGGGATTTGTGCCTTGCGCGTTGCTCGCTGCTCGTGGCCTGGCGTTTGGGCGAAGGGCCGACGCTTGCGCGCTGCCCTGTCGCTTGTTGTGCGCTTCTAATTCGTTTCCTGTTTCCGGTAATATTTCTGATTCGAACAATAAATCTGTTTTCGATAATATTTCTGATTCCGACAATATTTCCGATTCCAGTAATATTTTCGTTTTCGACAATATTTTCGTTTCCGGCAATGTTTCCGTTTCCAAAATATTTCTATTTCCAATAATATTTTCGATTCAAACCACATTTCCATTTCTGGTAATACCTTTTCCGGTAATATTTATAATTCCAATAATATTTCTGATAAGAAGAATATTTACACTTCCGGCAATATCTTCGTACGTTTCAGACAAATATTCTCGTTTTGCCTTTTGATAATTTGTGTAGCTCGATCCCACTGAAACCAACAATCATCATTTCCGAATATCCATTATTAGAGTATTTACTGAATAAAATATCACCTAAATATATAATTGATCCATTAACGTACTATTAGTGCGACCCTACGAGTTCAGCCAAGAGTAAGTTATGGTATTAATAATATTAATTCCACTTGAACTGAAGCGGTTTCTAGTTAGACATTCAGATCACTTGATCTCACTGAATAATTAACATGCTTAATTAATACTGAACCGCGTTTATAAGATTTCGCATTGAATACATTAAATACAAATTGGACCAAGGGCATATTTCCTTCAAGTATGAGCTAATTAAGATCATTGTGGATCAAATTGTTGAATTATTGTAGCACCTGTGTCAAAATTCGTGTTGCTAACACCTGAAACAAGACATAAAATTGTCTGTCTTCTGATCTGACACGAGTTGATCTATATTAGGTACTTGATATATGACAAAAAGTGAACCTGTCACATTAGGAAAATCGCTTACGGAGTAATTGAGTAGAAAATAAATTGATTTTCAATTACATATTTTAGTTGCAATACATATTGTAAATGCGAGGAGGGAGATTCAAACTTATAACCTATTATAAATATATTCTCTCGGTCTTAACCAATAGATCAAACTAACATCGTTGAATTCACTTCCTTATTAAATGTCTACTATTTGAAATCAACTTCCCTTTACACCCAAAACTAAGTATATTGTAATTAAAACTAAAATATGTACATGTCATTGACTAATTGGTGTTCAATAGTGGTTATAGTACGAAAGTAACCAATAATGGACTATGGGAAGTTGGATGCAAATAAAACAAATTATAGCATTGCGTTAGGTGGGATGCGCATTGCATGATGATTAGGTTGCACTTGCTAATAATCGTTGTCTTTGCTGAATTCAGTATGGTGGGGGTATTTCCATATTTGAGCAAGTTTAGATGAAATCATTTAATGGTAATTTAGGCCATGTTAAGAAAAACTACTAGGAGCAGGCATCTTTTAGCGGTTGAACAATGGATTTTATTAGAGTATAGGGTGGGGACGTGGGGTAACAGAAAACTAGTAGTGGGTAACGGTTAACTGTCAAATTAGTTGTTGATAACTTGAATGTACGGTAAAAGTAGCGATTGAAATTGTAAAATACAATACAATCATATTGTATTTAACTTTTGAGAAAAGATGTCCAACTGTTACCAATACACTAAACGCTATCTTGTCAAACACATTTAAATTTTACAAGTAGCGTTTTGGCTATTGCTACCGATTAAACGCTACTTCAAATAATATGCTCTAAATTGCGTCCCAGATTAGACATACATTGGAATCCTGAAGCACCACCACG

mRNA sequence

CAATTCCACTGTAAAAGACTAAGAGCCCAAATATTTTTTGGTAGCAATATCTCGAATGTGTTAGCCCAAAAATGATACCACCACTACTAGAAAAGCCCAAACAATAGAATGTTCACAGTTTATCAACCCTTTCTCTCTCCTTTATTAGGGTTTTAGCTACACAACTGCGCAACTTCGGCATTTCCCTTCTTCCCAGTTCTCCGCCTTTCAACCACCATGCCGAAGCAGATTCATGAGATAAAGGATTTCCTTCTGACTGCCAGAAGGAAAGATGCACGTTCCGTGAAGATCAAGAGAAGCAAGGATGTTGTCAAGTTCAAGGTCCGTTGCTCCAAGTATCTTTACACTCTCTGTGTCTTTGACAATGAGAAGGCTGACAAGTTGAAGCAGTCTCTTCCTCCTGGTTTGAGCGTCCAAGATCTTTGAGCAAGTGGAGTTGCCGTTCTCATATAGTAGCTGTTAGGCAATTGAAATCAGTTGTTTTTGTTTTGTCAAGCTTTGCAATTAGTGCAATGATTTGTAATCCTTTTAATCGAGTTGCATACTTGCTTGAAAGATATGATTTTGGCCCCTAAACTTTATTTTATGACCATATGTTATTTTTACTCATATTTCCAGTTTATTGATGATTCCTTGCTTTTGATTGTGAATGTGGTGTGTTGACCAGTGGTAAAGGCTCTTTATTCACCTCTTATGTTATTTTGCATTATAATTTCCAATCCTGGTTTACAGTGAGAGCTGTGTAGTACTCTGTATTGGAGATTTCTAGCAAAGTAGAGATCAAACGCTGGGGTTGTACAGAAACAGCATTAATTTTGCCATATTTGTTGTTTTACGTTTAGCTTCAACAGCATCAGGGCAAGCAAGGAAGTGCTTATATTTGGTTCAGAAGTTGAAAAATGGTAAACACAGCAACACAAGGGATTCCGAAATCTTGAGTTTGCAAATACGAGTGATTCTGAAAAATGGTAAACACAGCAACACAAGTGATTCCGAAAAATGATTAGACATACATTGGAATCCTGAAGCACCACCACG

Coding sequence (CDS)

ATGCCGAAGCAGATTCATGAGATAAAGGATTTCCTTCTGACTGCCAGAAGGAAAGATGCACGTTCCGTGAAGATCAAGAGAAGCAAGGATGTTGTCAAGTTCAAGGTCCGTTGCTCCAAGTATCTTTACACTCTCTGTGTCTTTGACAATGAGAAGGCTGACAAGTTGAAGCAGTCTCTTCCTCCTGGTTTGAGCGTCCAAGATCTTTGA

Protein sequence

MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSLPPGLSVQDL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo25031Spo25031gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo25031.1Spo25031.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25031.1.exon.1Spo25031.1.exon.1exon
Spo25031.1.exon.2Spo25031.1.exon.2exon
Spo25031.1.exon.3Spo25031.1.exon.3exon
Spo25031.1.exon.4Spo25031.1.exon.4exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25031.1.utr5p.1Spo25031.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25031.1.CDS.1Spo25031.1.CDS.1CDS
Spo25031.1.CDS.2Spo25031.1.CDS.2CDS
Spo25031.1.CDS.3Spo25031.1.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25031.1.utr3p.1Spo25031.1.utr3p.1three_prime_UTR
Spo25031.1.utr3p.2Spo25031.1.utr3p.2three_prime_UTR


Homology
[Close]
BLAST of Spo25031.1 vs. NCBI nr
Match: gi|902189617|gb|KNA11420.1| (hypothetical protein SOVF_135380 [Spinacia oleracea])

HSP 1 Score: 139.0 bits (349), Expect = 3.000e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. NCBI nr
Match: gi|629123314|gb|KCW87739.1| (hypothetical protein EUGRSUZ_A00108, partial [Eucalyptus grandis])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 32  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 91

Query: 61  PPGLSVQDL 70
           PPGLSVQDL
Sbjct: 92  PPGLSVQDL 100
[Close]
BLAST of Spo25031.1 vs. NCBI nr
Match: gi|297735234|emb|CBI17596.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 59  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 118

Query: 61  PPGLSVQDL 70
           PPGLSVQDL
Sbjct: 119 PPGLSVQDL 127
[Close]
BLAST of Spo25031.1 vs. NCBI nr
Match: gi|661878012|emb|CDP18171.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 36  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 95

Query: 61  PPGLSVQDL 70
           PPGLSVQDL
Sbjct: 96  PPGLSVQDL 104
[Close]
BLAST of Spo25031.1 vs. NCBI nr
Match: gi|359476741|ref|XP_003631881.1| (PREDICTED: 60S ribosomal protein L38 [Vitis vinifera])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIP0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_068230 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.100e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057800 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.000e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Match: D7SPL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00930 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.000e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 59  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 118

Query: 61  PPGLSVQDL 70
           PPGLSVQDL
Sbjct: 119 PPGLSVQDL 127
[Close]
BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KBT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G081500 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.000e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Match: A0A068U8M1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018662001 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.000e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

		  

Query: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD+EKADKLKQSL
Sbjct: 36  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 95

Query: 61  PPGLSVQDL 70
           PPGLSVQDL
Sbjct: 96  PPGLSVQDL 104
[Close]
BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Match: RL38_ARATH (60S ribosomal protein L38 OS=Arabidopsis thaliana GN=RPL38A PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.700e-31
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Match: RL38_SOLLC (60S ribosomal protein L38 OS=Solanum lycopersicum GN=RPL38 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.400e-29
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Match: RL38_BRABE (60S ribosomal protein L38 OS=Branchiostoma belcheri GN=RPL38 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.500e-26
Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V++L
Sbjct: 61 PPGLAVKEL 69
[Close]
BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Match: RL38_MOUSE (60S ribosomal protein L38 OS=Mus musculus GN=Rpl38 PE=1 SV=3)

HSP 1 Score: 112.1 bits (279), Expect = 2.500e-24
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V+DL
Sbjct: 61 PPGLAVKDL 69
[Close]
BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Match: RL38_RAT (60S ribosomal protein L38 OS=Rattus norvegicus GN=Rpl38 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 7.200e-24
Identity = 53/69 (76.81%), Postives = 64/69 (92.75%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V++L
Sbjct: 61 PPGLAVKEL 69
[Close]
BLAST of Spo25031.1 vs. TAIR (Arabidopsis)
Match: AT2G43460.1 (Ribosomal L38e protein family)

HSP 1 Score: 135.2 bits (339), Expect = 1.500e-32
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
[Close]
BLAST of Spo25031.1 vs. TAIR (Arabidopsis)
Match: AT3G59540.1 (Ribosomal L38e protein family)

HSP 1 Score: 135.2 bits (339), Expect = 1.500e-32
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 

		  

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDNEKADKLKQSL 60
          MPKQIHEIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69
The following BLAST results are available for this feature:
BLAST of Spo25031.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902189617|gb|KNA11420.1|3.0e-30100.hypothetical protein SOVF_1353... [more]
gi|629123314|gb|KCW87739.1|1.2e-2998.5hypothetical protein EUGRSUZ_A... [more]
gi|297735234|emb|CBI17596.3|1.2e-2998.5unnamed protein product [Vitis... [more]
gi|661878012|emb|CDP18171.1|1.2e-2998.5unnamed protein product [Coffe... [more]
gi|359476741|ref|XP_003631881.1|1.2e-2998.5PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo25031.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RIP0_SPIOL2.1e-30100.Uncharacterized protein OS=Spi... [more]
A0A0J8CRR4_BETVU8.0e-3098.5Uncharacterized protein OS=Bet... [more]
D7SPL7_VITVI8.0e-3098.5Putative uncharacterized prote... [more]
A0A0A0KBT2_CUCSA8.0e-3098.5Uncharacterized protein OS=Cuc... [more]
A0A068U8M1_COFCA8.0e-3098.5Uncharacterized protein OS=Cof... [more]
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BLAST of Spo25031.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL38_ARATH2.7e-3195.660S ribosomal protein L38 OS=A... [more]
RL38_SOLLC4.4e-2991.360S ribosomal protein L38 OS=S... [more]
RL38_BRABE4.5e-2682.660S ribosomal protein L38 OS=B... [more]
RL38_MOUSE2.5e-2478.260S ribosomal protein L38 OS=M... [more]
RL38_RAT7.2e-2476.860S ribosomal protein L38 OS=R... [more]
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BLAST of Spo25031.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G43460.11.5e-3295.6Ribosomal L38e protein family[more]
AT3G59540.11.5e-3295.6Ribosomal L38e protein family[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002675Ribosomal protein L38ePRODOMPD010361coord: 1..69
score: 3.0
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 2..69
score: 2.1
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 2..68
score: 7.2
NoneNo IPR availablePANTHERPTHR10965:SF3SUBFAMILY NOT NAMEDcoord: 2..69
score: 2.1

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome