Spo06958.1 (mRNA)

Overview
NameSpo06958.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationSpoScf_04745 : 7364 .. 9316 (+)
Sequence length1383
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCATCTCCTTCCCGCAACTCAAGATTATCAGAACCCAAGAAGAAGATTTGGAAAGAAGGTGAATTCCCAGCATATTCTGAGAATTCAATTCCTGTGTTTCAAAAGAAAAGAACCCAGATTAAAAATGTCAAGAAGAAGCTTGATCGTAAGGCGAAAGCTAAAGCTTGGGTTAATACTGTTACTGAGTCTCTTTCTGACCTTATCCTTAAGAAACAATGGCTTCAAGCTCTTCAGGTTCTCCTCTAACTTCATTCTCTCTCTAAAACAGTAAAACCCTCGGCCCCCTCACTAGAGCTGTTAAAGACTGACCCGAGTAGAAATTATGACTAGTTAGTAAGTTACTGTAACAGTTAATTAACTCAACTTGACCCAAGTACTCGATTTCATACCTCTGCAGTTAACCCCATTATATGCTAGAGCTTAATTTATTGAATTTAACACTTCAACTTTGATTTTATGGATTGTGAATTGGTACCAAAATGGAGTTGAGTACTGTGTTTTTATCATTGTGGTTTATTTCCTTGGCTTAATTGTTGAATAATTATTTTTGCATATATTGAATTTCGCATTTGGGTCCATTGGAAACTAACCTCTCTGCAATTGCGGGGTAAGGTTGCGTACACCCGACCCCCTTTTGAGGCAATGGGGTAATGGTAATGATAATGATGATTGAATTTCTTAGCTTTTCAATACTTTTTCATAAACATCAAATTATAGTGGTGGTTTGAAATTCGGAATGGTTTGTTATTGATGAGCAATAGGGACATAAATTATAGTGGTGGTTTGAAATTTTGAACTGCTTAGGTGTTCGAGATGCTGAGAGAACAATCATTCTATCAACCAAAAGAAGGAACTTACATGAAACTGCTTGTACTGCTTGGAAAATCAGGACAACCGCGACGAGCTCATCAACTTTTTGATACCATGATTGAGGAAGGGCTTGAACCAACCCGTGAGCTTTATACTGCCTTGCTTGCTGCTTATTGCCGCAGTTTCTTGATTGATGATGCATTCTCGATTCTAGTTAAAATGAAGGCTCTTCCACAATGTCAGCCTGATGTGTTTACTTACAGCACTTTGATCAAGGCTTGTATTGATGCTTCTCATTTTGATTTGGTAGAGTCCCTCTATAAAGAAATGGATGAACGAGGTATTGTTCCTAACACGGTCACTCAGAATATTGTACTCAGTGGATATGGTAAAGCTGGGAAATTCGACCAAATGGAGAAGATTTTGTCTGGAATGCTTCAGAGTCCTACTTGCAAACCTGATGTATGGACTATGAACACAATAATTGCCTTATTTGGAAATATGGGTCAGATTGAGATGATGGAAAGGTGGTATGAGAAATTCCGGGATTTCAATATTGAACCTGAAACTAGGACTTTTAACATCTTAATTGGTGCTTATGGGAAAAAGCGCATGTATGATAAAATGTCTTCGGTGATGGAATACATGCGCAAGCTTGAATTTCCTTGGACAACTTCCACTTACAATAATGTGATAGAGGCATTTTCTGATGTAGGAGATGTGAAAAACATGGAATTTACGTTCAATCAGATGCGTGCTGAGGGAATGAAAGCAGACACCAAGACAATTTGTTGTCTTGTTCGGGGATATGCCAATGCGGGTGTGTTCCATAAAGTAGTGAGTACTGCTCAATTGGCTGGAAGATTGGAGATACCAGAAAATACATCATTTTTTAATGCTGTTATATTTGCATGTGCAAAAGCTGATGATTTGATGGAAATGGAAAGAGTTTATAGAAGGATGAAGGAGAAACACTGCCAGCCGGATGACAATACTTTCGCTGTCATGATTGATGCTTACAGCAAGGAAGGTATGAGTGACAAGATATATGACTTGGAACAGGAAAGAGACAAGATGGTCACTGCCACTCCCGGGGATAACTCGAGTGAAGTGATGGACCCTGCTAGTGATGTCTGA

mRNA sequence

ATGGCTTCATCTCCTTCCCGCAACTCAAGATTATCAGAACCCAAGAAGAAGATTTGGAAAGAAGGTGAATTCCCAGCATATTCTGAGAATTCAATTCCTGTGTTTCAAAAGAAAAGAACCCAGATTAAAAATGTCAAGAAGAAGCTTGATCGTAAGGCGAAAGCTAAAGCTTGGGTTAATACTGTTACTGAGTCTCTTTCTGACCTTATCCTTAAGAAACAATGGCTTCAAGCTCTTCAGGTGTTCGAGATGCTGAGAGAACAATCATTCTATCAACCAAAAGAAGGAACTTACATGAAACTGCTTGTACTGCTTGGAAAATCAGGACAACCGCGACGAGCTCATCAACTTTTTGATACCATGATTGAGGAAGGGCTTGAACCAACCCGTGAGCTTTATACTGCCTTGCTTGCTGCTTATTGCCGCAGTTTCTTGATTGATGATGCATTCTCGATTCTAGTTAAAATGAAGGCTCTTCCACAATGTCAGCCTGATGTGTTTACTTACAGCACTTTGATCAAGGCTTGTATTGATGCTTCTCATTTTGATTTGGTAGAGTCCCTCTATAAAGAAATGGATGAACGAGGTATTGTTCCTAACACGGTCACTCAGAATATTGTACTCAGTGGATATGGTAAAGCTGGGAAATTCGACCAAATGGAGAAGATTTTGTCTGGAATGCTTCAGAGTCCTACTTGCAAACCTGATGTATGGACTATGAACACAATAATTGCCTTATTTGGAAATATGGGTCAGATTGAGATGATGGAAAGGTGGTATGAGAAATTCCGGGATTTCAATATTGAACCTGAAACTAGGACTTTTAACATCTTAATTGGTGCTTATGGGAAAAAGCGCATGTATGATAAAATGTCTTCGGTGATGGAATACATGCGCAAGCTTGAATTTCCTTGGACAACTTCCACTTACAATAATGTGATAGAGGCATTTTCTGATGTAGGAGATGTGAAAAACATGGAATTTACGTTCAATCAGATGCGTGCTGAGGGAATGAAAGCAGACACCAAGACAATTTGTTGTCTTGTTCGGGGATATGCCAATGCGGGTGTGTTCCATAAAGTAGTGAGTACTGCTCAATTGGCTGGAAGATTGGAGATACCAGAAAATACATCATTTTTTAATGCTGTTATATTTGCATGTGCAAAAGCTGATGATTTGATGGAAATGGAAAGAGTTTATAGAAGGATGAAGGAGAAACACTGCCAGCCGGATGACAATACTTTCGCTGTCATGATTGATGCTTACAGCAAGGAAGGTATGAGTGACAAGATATATGACTTGGAACAGGAAAGAGACAAGATGGTCACTGCCACTCCCGGGGATAACTCGAGTGAAGTGATGGACCCTGCTAGTGATGTCTGA

Coding sequence (CDS)

ATGGCTTCATCTCCTTCCCGCAACTCAAGATTATCAGAACCCAAGAAGAAGATTTGGAAAGAAGGTGAATTCCCAGCATATTCTGAGAATTCAATTCCTGTGTTTCAAAAGAAAAGAACCCAGATTAAAAATGTCAAGAAGAAGCTTGATCGTAAGGCGAAAGCTAAAGCTTGGGTTAATACTGTTACTGAGTCTCTTTCTGACCTTATCCTTAAGAAACAATGGCTTCAAGCTCTTCAGGTGTTCGAGATGCTGAGAGAACAATCATTCTATCAACCAAAAGAAGGAACTTACATGAAACTGCTTGTACTGCTTGGAAAATCAGGACAACCGCGACGAGCTCATCAACTTTTTGATACCATGATTGAGGAAGGGCTTGAACCAACCCGTGAGCTTTATACTGCCTTGCTTGCTGCTTATTGCCGCAGTTTCTTGATTGATGATGCATTCTCGATTCTAGTTAAAATGAAGGCTCTTCCACAATGTCAGCCTGATGTGTTTACTTACAGCACTTTGATCAAGGCTTGTATTGATGCTTCTCATTTTGATTTGGTAGAGTCCCTCTATAAAGAAATGGATGAACGAGGTATTGTTCCTAACACGGTCACTCAGAATATTGTACTCAGTGGATATGGTAAAGCTGGGAAATTCGACCAAATGGAGAAGATTTTGTCTGGAATGCTTCAGAGTCCTACTTGCAAACCTGATGTATGGACTATGAACACAATAATTGCCTTATTTGGAAATATGGGTCAGATTGAGATGATGGAAAGGTGGTATGAGAAATTCCGGGATTTCAATATTGAACCTGAAACTAGGACTTTTAACATCTTAATTGGTGCTTATGGGAAAAAGCGCATGTATGATAAAATGTCTTCGGTGATGGAATACATGCGCAAGCTTGAATTTCCTTGGACAACTTCCACTTACAATAATGTGATAGAGGCATTTTCTGATGTAGGAGATGTGAAAAACATGGAATTTACGTTCAATCAGATGCGTGCTGAGGGAATGAAAGCAGACACCAAGACAATTTGTTGTCTTGTTCGGGGATATGCCAATGCGGGTGTGTTCCATAAAGTAGTGAGTACTGCTCAATTGGCTGGAAGATTGGAGATACCAGAAAATACATCATTTTTTAATGCTGTTATATTTGCATGTGCAAAAGCTGATGATTTGATGGAAATGGAAAGAGTTTATAGAAGGATGAAGGAGAAACACTGCCAGCCGGATGACAATACTTTCGCTGTCATGATTGATGCTTACAGCAAGGAAGGTATGAGTGACAAGATATATGACTTGGAACAGGAAAGAGACAAGATGGTCACTGCCACTCCCGGGGATAACTCGAGTGAAGTGATGGACCCTGCTAGTGATGTCTGA

Protein sequence

MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo06958Spo06958gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo06958.1Spo06958.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06958.1.exon.1Spo06958.1.exon.1exon
Spo06958.1.exon.2Spo06958.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06958.1.CDS.1Spo06958.1.CDS.1CDS
Spo06958.1.CDS.2Spo06958.1.CDS.2CDS


Homology
BLAST of Spo06958.1 vs. NCBI nr
Match: gi|902148614|gb|KNA05262.1| (hypothetical protein SOVF_192050 [Spinacia oleracea])

HSP 1 Score: 922.9 bits (2384), Expect = 2.200e-265
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1

		  

Query: 1   MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 60
           MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN
Sbjct: 41  MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 100

Query: 61  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 120
           TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT
Sbjct: 101 TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 160

Query: 121 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 180
           MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS
Sbjct: 161 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 220

Query: 181 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 240
           HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM
Sbjct: 221 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 280

Query: 241 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 300
           NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 281 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 340

Query: 301 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 360
           LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK
Sbjct: 341 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 400

Query: 361 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 420
           VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID
Sbjct: 401 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 460

Query: 421 AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 461
           AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV
Sbjct: 461 AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 500

BLAST of Spo06958.1 vs. NCBI nr
Match: gi|731323777|ref|XP_010672616.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 808.5 bits (2087), Expect = 5.900e-231
Identity = 403/463 (87.04%), Postives = 427/463 (92.22%), Query Frame = 1

		  

Query: 1   MASSPSRNSRLS-EP--KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKA 60
           +ASSPSR+S+ S EP  KK+IWKEGEFPA SENSIP F K RTQIKNVKKKLDRKAKAKA
Sbjct: 41  IASSPSRSSKSSSEPKNKKRIWKEGEFPALSENSIPGFPKTRTQIKNVKKKLDRKAKAKA 100

Query: 61  WVNTVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQL 120
           WVNTVTESLSDLI KKQWLQAL+VFEMLR+QSFY PKEGTYMKLLVLLGKSGQPRRAH+L
Sbjct: 101 WVNTVTESLSDLIFKKQWLQALEVFEMLRKQSFYHPKEGTYMKLLVLLGKSGQPRRAHEL 160

Query: 121 FDTMIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACI 180
           FDTMIEEGLEPT ELYTAL+AAYCRS LID AFSIL KMK LP CQPDVFTYSTLIK CI
Sbjct: 161 FDTMIEEGLEPTSELYTALMAAYCRSNLIDKAFSILAKMKGLPLCQPDVFTYSTLIKTCI 220

Query: 181 DASHFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDV 240
           DA+ FDLVESLY+EMDERGI+PNTVTQNIVLSGYGKAGKFDQMEKILS MLQSPTCKPDV
Sbjct: 221 DAARFDLVESLYEEMDERGIIPNTVTQNIVLSGYGKAGKFDQMEKILSEMLQSPTCKPDV 280

Query: 241 WTMNTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEY 300
           WTMNTIIALFGN G IEMMERWYEKFRDF IEPETRTFNILIGAYGKKRMYDKMS+VMEY
Sbjct: 281 WTMNTIIALFGNNGHIEMMERWYEKFRDFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 340

Query: 301 MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGV 360
           MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMR EGM+ADTKTICCLV+GYANAGV
Sbjct: 341 MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRTEGMRADTKTICCLVKGYANAGV 400

Query: 361 FHKVVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAV 420
           FHKVVSTAQLAGRLEIPENTSFFN+V+FACAKA+DLMEMERVYRRMKEK CQP+D TF  
Sbjct: 401 FHKVVSTAQLAGRLEIPENTSFFNSVLFACAKAEDLMEMERVYRRMKEKQCQPNDTTFDT 460

Query: 421 MIDAYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 461
           MI+AY K GM+DKIYDLEQER+K +   PG+  SE+MDP SDV
Sbjct: 461 MIEAYRKVGMNDKIYDLEQEREKTIITIPGEELSELMDPVSDV 503

BLAST of Spo06958.1 vs. NCBI nr
Match: gi|225432159|ref|XP_002274904.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Vitis vinifera])

HSP 1 Score: 716.8 bits (1849), Expect = 2.300e-203
Identity = 346/446 (77.58%), Postives = 397/446 (89.01%), Query Frame = 1

		  

Query: 2   ASSPSRNSRLSEP-KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 61
           +S+PS +S  S   KK++WK+GEFP  S       + ++T IKN+KKKLDRK  AKAW N
Sbjct: 54  SSTPSSSSSSSAVGKKRLWKQGEFPGTSAEG----RSRKTPIKNIKKKLDRKNDAKAWAN 113

Query: 62  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 121
           TV E+LSDL+LKKQWLQAL+VFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RAH+LFDT
Sbjct: 114 TVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDT 173

Query: 122 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 181
           M+EEG EPT ELYTALLA+YCRS LID+AFSIL +MK LP+CQPDVFTYSTL+KAC+DAS
Sbjct: 174 MVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDAS 233

Query: 182 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 241
            F+LVESLY+EMD R I PNTVTQNIVLSGYGKAGKFD+MEK+LSGML+S + KPDVWTM
Sbjct: 234 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 293

Query: 242 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 301
           NTI++LFGN GQIE+ME+WYEKFR+F IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 294 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 353

Query: 302 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 361
           L+FPWTTSTYNNVIEAFSDVGD KNME+TF+QMRAEGMKADTKT CCL+RGYANAG+FHK
Sbjct: 354 LQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHK 413

Query: 362 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 421
           VVS+ QLAG+ EIPENTSF+NAVI ACAKA+DL+EMERV+ RMK+KHCQPD  T+++M++
Sbjct: 414 VVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVE 473

Query: 422 AYSKEGMSDKIYDLEQERDKMVTATP 447
           AY KEGM+DKIYDLEQER +MV   P
Sbjct: 474 AYKKEGMNDKIYDLEQERQRMVADGP 495

BLAST of Spo06958.1 vs. NCBI nr
Match: gi|147820978|emb|CAN74604.1| (hypothetical protein VITISV_025315 [Vitis vinifera])

HSP 1 Score: 714.5 bits (1843), Expect = 1.200e-202
Identity = 344/442 (77.83%), Postives = 396/442 (89.59%), Query Frame = 1

		  

Query: 2   ASSPSRNSRLSEP-KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 61
           +S+PS +S  S   KK++WK+GEFP  S       + ++T IKN+KKKLDRK  AKAW N
Sbjct: 54  SSTPSSSSSSSAVGKKRLWKQGEFPGTSAEG----RSRKTPIKNIKKKLDRKNDAKAWAN 113

Query: 62  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 121
           TV E+LSDL+LKKQWLQAL+VFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RAH+LFDT
Sbjct: 114 TVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDT 173

Query: 122 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 181
           M+EEG EPT ELYTALLA+YCRS LID+AFSIL +MK LP+CQPDVFTYSTL+KAC+DAS
Sbjct: 174 MVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDAS 233

Query: 182 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 241
            F+LVESLY+EMD R I PNTVTQNIVLSGYGKAGKFD+MEK+LSGML+S + KPDVWTM
Sbjct: 234 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 293

Query: 242 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 301
           NTI++LFGN GQIE+ME+WYEKFR+F IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 294 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 353

Query: 302 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 361
           L+FPWTTSTYNNVIEAFSDVGD KNME+TF+QMRAEGMKADTKT CCL+RGYANAG+FHK
Sbjct: 354 LQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHK 413

Query: 362 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 421
           VVS+ QLAG+ EIPENTSF+NAVI ACAKA+DL+EMERV+ RMK+KHCQPD  T+++M++
Sbjct: 414 VVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVE 473

Query: 422 AYSKEGMSDKIYDLEQERDKMV 443
           AY KEGM+DKIYDLEQER +M+
Sbjct: 474 AYKKEGMNDKIYDLEQERQRMM 491

BLAST of Spo06958.1 vs. NCBI nr
Match: gi|823247815|ref|XP_012456574.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Gossypium raimondii])

HSP 1 Score: 708.4 bits (1827), Expect = 8.300e-201
Identity = 345/438 (78.77%), Postives = 390/438 (89.04%), Query Frame = 1

		  

Query: 5   PSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTE 64
           PS  +     KK+ WKEGE+P  S +SIP   KK T +KN+KKKLDRK  AKAWV+TVTE
Sbjct: 38  PSAVAGAVSDKKRHWKEGEYPGLSHHSIPGSSKK-TPLKNLKKKLDRKNAAKAWVSTVTE 97

Query: 65  SLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEE 124
           +LSD ILKKQWLQALQVFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RA QLFD M+EE
Sbjct: 98  TLSDCILKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPHRARQLFDEMVEE 157

Query: 125 GLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDL 184
           G EPT ELYTALLAAYCR+ LIDDAFS L +MK LP+CQPDVFTYSTLIKAC+DAS FDL
Sbjct: 158 GCEPTPELYTALLAAYCRNNLIDDAFSTLNQMKTLPRCQPDVFTYSTLIKACVDASRFDL 217

Query: 185 VESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTII 244
           VESLY+EMDER I PNTVTQNIVLSGYGKAGKFDQMEK+LSGML+S  CKPDVWTMNTI+
Sbjct: 218 VESLYEEMDERLITPNTVTQNIVLSGYGKAGKFDQMEKVLSGMLESSACKPDVWTMNTIL 277

Query: 245 ALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFP 304
           ++FGN GQI+MMERWYEKFR+F IEPETR+FNILIGAYGKKRMYDKMSSVMEYMRKL+FP
Sbjct: 278 SVFGNKGQIDMMERWYEKFRNFGIEPETRSFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 337

Query: 305 WTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVST 364
           WTTSTYNNVIEAF+DVGDVK+ME+TF+QMRAEGMKADTKT CCL+ GYANAG+FHKV+ST
Sbjct: 338 WTTSTYNNVIEAFADVGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVIST 397

Query: 365 AQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSK 424
           AQLA + EIPENTSF+NAVIFACAKA+DLMEMERV+ RMK+K C P++ TF++M+DAY K
Sbjct: 398 AQLAAKFEIPENTSFYNAVIFACAKAEDLMEMERVFNRMKDKQCPPNELTFSIMVDAYRK 457

Query: 425 EGMSDKIYDLEQERDKMV 443
           EGM+DKIY LEQ + +++
Sbjct: 458 EGMNDKIYYLEQLQQELL 474

BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDB6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_192050 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 1.500e-265
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1

		  

Query: 1   MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 60
           MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN
Sbjct: 41  MASSPSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 100

Query: 61  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 120
           TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT
Sbjct: 101 TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 160

Query: 121 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 180
           MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS
Sbjct: 161 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 220

Query: 181 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 240
           HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM
Sbjct: 221 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 280

Query: 241 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 300
           NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 281 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 340

Query: 301 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 360
           LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK
Sbjct: 341 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 400

Query: 361 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 420
           VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID
Sbjct: 401 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 460

Query: 421 AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 461
           AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV
Sbjct: 461 AYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 500

BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNX3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059850 PE=4 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 4.100e-231
Identity = 403/463 (87.04%), Postives = 427/463 (92.22%), Query Frame = 1

		  

Query: 1   MASSPSRNSRLS-EP--KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKA 60
           +ASSPSR+S+ S EP  KK+IWKEGEFPA SENSIP F K RTQIKNVKKKLDRKAKAKA
Sbjct: 41  IASSPSRSSKSSSEPKNKKRIWKEGEFPALSENSIPGFPKTRTQIKNVKKKLDRKAKAKA 100

Query: 61  WVNTVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQL 120
           WVNTVTESLSDLI KKQWLQAL+VFEMLR+QSFY PKEGTYMKLLVLLGKSGQPRRAH+L
Sbjct: 101 WVNTVTESLSDLIFKKQWLQALEVFEMLRKQSFYHPKEGTYMKLLVLLGKSGQPRRAHEL 160

Query: 121 FDTMIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACI 180
           FDTMIEEGLEPT ELYTAL+AAYCRS LID AFSIL KMK LP CQPDVFTYSTLIK CI
Sbjct: 161 FDTMIEEGLEPTSELYTALMAAYCRSNLIDKAFSILAKMKGLPLCQPDVFTYSTLIKTCI 220

Query: 181 DASHFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDV 240
           DA+ FDLVESLY+EMDERGI+PNTVTQNIVLSGYGKAGKFDQMEKILS MLQSPTCKPDV
Sbjct: 221 DAARFDLVESLYEEMDERGIIPNTVTQNIVLSGYGKAGKFDQMEKILSEMLQSPTCKPDV 280

Query: 241 WTMNTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEY 300
           WTMNTIIALFGN G IEMMERWYEKFRDF IEPETRTFNILIGAYGKKRMYDKMS+VMEY
Sbjct: 281 WTMNTIIALFGNNGHIEMMERWYEKFRDFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 340

Query: 301 MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGV 360
           MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMR EGM+ADTKTICCLV+GYANAGV
Sbjct: 341 MRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRTEGMRADTKTICCLVKGYANAGV 400

Query: 361 FHKVVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAV 420
           FHKVVSTAQLAGRLEIPENTSFFN+V+FACAKA+DLMEMERVYRRMKEK CQP+D TF  
Sbjct: 401 FHKVVSTAQLAGRLEIPENTSFFNSVLFACAKAEDLMEMERVYRRMKEKQCQPNDTTFDT 460

Query: 421 MIDAYSKEGMSDKIYDLEQERDKMVTATPGDNSSEVMDPASDV 461
           MI+AY K GM+DKIYDLEQER+K +   PG+  SE+MDP SDV
Sbjct: 461 MIEAYRKVGMNDKIYDLEQEREKTIITIPGEELSELMDPVSDV 503

BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Match: F6HE37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g00690 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 1.600e-203
Identity = 346/446 (77.58%), Postives = 397/446 (89.01%), Query Frame = 1

		  

Query: 2   ASSPSRNSRLSEP-KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 61
           +S+PS +S  S   KK++WK+GEFP  S       + ++T IKN+KKKLDRK  AKAW N
Sbjct: 54  SSTPSSSSSSSAVGKKRLWKQGEFPGTSAEG----RSRKTPIKNIKKKLDRKNDAKAWAN 113

Query: 62  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 121
           TV E+LSDL+LKKQWLQAL+VFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RAH+LFDT
Sbjct: 114 TVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDT 173

Query: 122 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 181
           M+EEG EPT ELYTALLA+YCRS LID+AFSIL +MK LP+CQPDVFTYSTL+KAC+DAS
Sbjct: 174 MVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDAS 233

Query: 182 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 241
            F+LVESLY+EMD R I PNTVTQNIVLSGYGKAGKFD+MEK+LSGML+S + KPDVWTM
Sbjct: 234 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 293

Query: 242 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 301
           NTI++LFGN GQIE+ME+WYEKFR+F IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 294 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 353

Query: 302 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 361
           L+FPWTTSTYNNVIEAFSDVGD KNME+TF+QMRAEGMKADTKT CCL+RGYANAG+FHK
Sbjct: 354 LQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHK 413

Query: 362 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 421
           VVS+ QLAG+ EIPENTSF+NAVI ACAKA+DL+EMERV+ RMK+KHCQPD  T+++M++
Sbjct: 414 VVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVE 473

Query: 422 AYSKEGMSDKIYDLEQERDKMVTATP 447
           AY KEGM+DKIYDLEQER +MV   P
Sbjct: 474 AYKKEGMNDKIYDLEQERQRMVADGP 495

BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Match: A5BHU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025315 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 8.100e-203
Identity = 344/442 (77.83%), Postives = 396/442 (89.59%), Query Frame = 1

		  

Query: 2   ASSPSRNSRLSEP-KKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVN 61
           +S+PS +S  S   KK++WK+GEFP  S       + ++T IKN+KKKLDRK  AKAW N
Sbjct: 54  SSTPSSSSSSSAVGKKRLWKQGEFPGTSAEG----RSRKTPIKNIKKKLDRKNDAKAWAN 113

Query: 62  TVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDT 121
           TV E+LSDL+LKKQWLQAL+VFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RAH+LFDT
Sbjct: 114 TVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDT 173

Query: 122 MIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDAS 181
           M+EEG EPT ELYTALLA+YCRS LID+AFSIL +MK LP+CQPDVFTYSTL+KAC+DAS
Sbjct: 174 MVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDAS 233

Query: 182 HFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTM 241
            F+LVESLY+EMD R I PNTVTQNIVLSGYGKAGKFD+MEK+LSGML+S + KPDVWTM
Sbjct: 234 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 293

Query: 242 NTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 301
           NTI++LFGN GQIE+ME+WYEKFR+F IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK
Sbjct: 294 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 353

Query: 302 LEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHK 361
           L+FPWTTSTYNNVIEAFSDVGD KNME+TF+QMRAEGMKADTKT CCL+RGYANAG+FHK
Sbjct: 354 LQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHK 413

Query: 362 VVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMID 421
           VVS+ QLAG+ EIPENTSF+NAVI ACAKA+DL+EMERV+ RMK+KHCQPD  T+++M++
Sbjct: 414 VVSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVE 473

Query: 422 AYSKEGMSDKIYDLEQERDKMV 443
           AY KEGM+DKIYDLEQER +M+
Sbjct: 474 AYKKEGMNDKIYDLEQERQRMM 491

BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SZ09_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G2051001 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 5.800e-201
Identity = 345/438 (78.77%), Postives = 390/438 (89.04%), Query Frame = 1

		  

Query: 5   PSRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTE 64
           PS  +     KK+ WKEGE+P  S +SIP   KK T +KN+KKKLDRK  AKAWV+TVTE
Sbjct: 38  PSAVAGAVSDKKRHWKEGEYPGLSHHSIPGSSKK-TPLKNLKKKLDRKNAAKAWVSTVTE 97

Query: 65  SLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEE 124
           +LSD ILKKQWLQALQVFEMLREQ FYQPKEGTYMKLLVLLGKSGQP RA QLFD M+EE
Sbjct: 98  TLSDCILKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPHRARQLFDEMVEE 157

Query: 125 GLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDL 184
           G EPT ELYTALLAAYCR+ LIDDAFS L +MK LP+CQPDVFTYSTLIKAC+DAS FDL
Sbjct: 158 GCEPTPELYTALLAAYCRNNLIDDAFSTLNQMKTLPRCQPDVFTYSTLIKACVDASRFDL 217

Query: 185 VESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTII 244
           VESLY+EMDER I PNTVTQNIVLSGYGKAGKFDQMEK+LSGML+S  CKPDVWTMNTI+
Sbjct: 218 VESLYEEMDERLITPNTVTQNIVLSGYGKAGKFDQMEKVLSGMLESSACKPDVWTMNTIL 277

Query: 245 ALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFP 304
           ++FGN GQI+MMERWYEKFR+F IEPETR+FNILIGAYGKKRMYDKMSSVMEYMRKL+FP
Sbjct: 278 SVFGNKGQIDMMERWYEKFRNFGIEPETRSFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 337

Query: 305 WTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVST 364
           WTTSTYNNVIEAF+DVGDVK+ME+TF+QMRAEGMKADTKT CCL+ GYANAG+FHKV+ST
Sbjct: 338 WTTSTYNNVIEAFADVGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVIST 397

Query: 365 AQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSK 424
           AQLA + EIPENTSF+NAVIFACAKA+DLMEMERV+ RMK+K C P++ TF++M+DAY K
Sbjct: 398 AQLAAKFEIPENTSFYNAVIFACAKAEDLMEMERVFNRMKDKQCPPNELTFSIMVDAYRK 457

Query: 425 EGMSDKIYDLEQERDKMV 443
           EGM+DKIY LEQ + +++
Sbjct: 458 EGMNDKIYYLEQLQQELL 474

BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Match: PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 3.900e-198
Identity = 339/447 (75.84%), Postives = 387/447 (86.58%), Query Frame = 1

		  

Query: 6   SRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTES 65
           S++S  S  KK++WK+GEFP  +E   PV Q+ RT IKNVKKKLDR++KA  WVNTVTE+
Sbjct: 39  SKSSPGSVTKKRLWKDGEFPGITE---PVNQR-RTPIKNVKKKLDRRSKANGWVNTVTET 98

Query: 66  LSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEG 125
           LSDLI KKQWLQAL+VF+MLREQ+FYQPKEGTYMKLLVLLGKSGQP RA +LFD M+EEG
Sbjct: 99  LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 158

Query: 126 LEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLV 185
           LEPT ELYTALLAAY RS LIDDAFSIL KMK+ PQCQPDVFTYSTL+KAC+DAS FDLV
Sbjct: 159 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 218

Query: 186 ESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIA 245
           +SLYKEMDER I PNTVTQNIVLSGYG+ G+FDQMEK+LS ML S  CKPDVWTMN I++
Sbjct: 219 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 278

Query: 246 LFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPW 305
           +FGNMG+I+MME WYEKFR+F IEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKLEFPW
Sbjct: 279 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 338

Query: 306 TTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTA 365
           TTSTYNN+IEAF+DVGD KNME TF+QMR+EGMKADTKT CCL+ GYANAG+FHKV+S+ 
Sbjct: 339 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 398

Query: 366 QLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKE 425
           QLA + EIPENT+F+NAVI ACAKADDL+EMERVY RMKE+ C  D  TF +M++AY KE
Sbjct: 399 QLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 458

Query: 426 GMSDKIYDLEQERDKMVTATPGDNSSE 453
           GM+DKIY LEQER K++  T      E
Sbjct: 459 GMNDKIYYLEQERQKLMDRTVATKEME 481

BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 9.200e-91
Identity = 179/419 (42.72%), Postives = 247/419 (58.95%), Query Frame = 1

		  

Query: 16  KKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTESLSDLILKKQW 75
           K+I ++      S  +I +  ++      ++KK   K   K    TV ESL + I   +W
Sbjct: 74  KEIKEDKNTKIASRKAISIILRREATKSIIEKK---KGSKKLLPRTVLESLHERITALRW 133

Query: 76  LQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTA 135
             A+QVFE+LREQ +Y+P  G Y+KL+V+LGK  QP +AH+LF  MI EG     E+YTA
Sbjct: 134 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 193

Query: 136 LLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLYKEMDER 195
           L++AY RS   D AF++L +MK+   CQPDV TYS LIK+ +    FD V+ L  +M  +
Sbjct: 194 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 253

Query: 196 GIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEM 255
           GI PNT+T N ++  YGKA  F +ME  L  ML    CKPD WTMN+ +  FG  GQIEM
Sbjct: 254 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 313

Query: 256 MERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIE 315
           ME  YEKF+   IEP  RTFNIL+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+
Sbjct: 314 MENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVID 373

Query: 316 AFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPE 375
           AF   GD+K ME+ F  M++E +     T+C LVR Y  A    K+    +     +I  
Sbjct: 374 AFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRL 433

Query: 376 NTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKEGMSDKIYDL 435
           +  FFN ++ A  + +   EM+ V   M++K  +PD  T+  M+ AY   GM+  + +L
Sbjct: 434 DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Match: PP279_ARATH (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.900e-89
Identity = 161/396 (40.66%), Postives = 250/396 (63.13%), Query Frame = 1

		  

Query: 42  IKNVKKKLDRKAKAKAWVNTVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKL 101
           +K +++K + +     W   V E+L + I + +W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 41  VKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKL 100

Query: 102 LVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQ 161
             +LG   QP +A  LF+ M+ EGL+PT ++YT+L++ Y +S L+D AFS L  MK++  
Sbjct: 101 FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 160

Query: 162 CQPDVFTYSTLIKACIDASHFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQME 221
           C+PDVFT++ LI  C     FDLV+S+  EM   G+  +TVT N ++ GYGKAG F++ME
Sbjct: 161 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 220

Query: 222 KILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGA 281
            +L+ M++     PDV T+N+II  +GN   +  ME WY +F+   ++P+  TFNILI +
Sbjct: 221 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 280

Query: 282 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKAD 341
           +GK  MY KM SVM++M K  F  TT TYN VIE F   G ++ M+  F +M+ +G+K +
Sbjct: 281 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 340

Query: 342 TKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYR 401
           + T C LV  Y+ AG+  K+ S  +     ++  +T FFN +I A  +A DL  M+ +Y 
Sbjct: 341 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 400

Query: 402 RMKEKHCQPDDNTFAVMIDAYSKEGMSDKIYDLEQE 438
           +M+E+ C+PD  TFA MI  Y+  G+ D + +LE++
Sbjct: 401 QMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 436

BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Match: PP358_ARATH (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.200e-43
Identity = 101/353 (28.61%), Postives = 174/353 (49.29%), Query Frame = 1

		  

Query: 74  QWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELY 133
           +WLQ L+VF  +++Q +Y P  G Y KL+ ++GK GQ R A  LF  M   G  P   +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 134 TALLAAYC----RSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLY 193
            AL+ A+     ++  ++     L KMK + +CQP+V TY+ L++A   +   D V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 194 KEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGN 253
           K++D   + P+  T N V+  YGK G   +ME +L+ M +S  CKPD+ T N +I  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 254 MGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTST 313
             + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 314 YNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAG 373
           Y  +I  +   G V      F ++          T+  ++  Y   G++ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 374 RLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAY 423
              +  + S +  +  A  KAD   +++ + ++M++    P+   F   ++ +
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463

BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.100e-40
Identity = 111/365 (30.41%), Postives = 172/365 (47.12%), Query Frame = 1

		  

Query: 77  QALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTAL 136
           +A QVFE ++   F   K  TY  LL + GKS +P+ A ++ + M+  G  P+   Y +L
Sbjct: 297 EAAQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 356

Query: 137 LAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLYKEMDERG 196
           ++AY R  ++D+A  +  +M A    +PDVFTY+TL+     A   +   S+++EM   G
Sbjct: 357 ISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 416

Query: 197 IVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEMM 256
             PN  T N  +  YG  GKF +M KI    +      PD+ T NT++A+FG  G    +
Sbjct: 417 CKPNICTFNAFIKMYGNRGKFTEMMKIFDE-INVCGLSPDIVTWNTLLAVFGQNGMDSEV 476

Query: 257 ERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIEA 316
              +++ +     PE  TFN LI AY +   +++  +V   M         STYN V+ A
Sbjct: 477 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 536

Query: 317 FSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPEN 376
            +  G  +  E    +M     K +  T C L+  YAN      + S A+      I   
Sbjct: 537 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 596

Query: 377 TSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKEGMSDK---IYD 436
                 ++  C+K D L E ER +  +KE+   PD  T   M+  Y +  M  K   + D
Sbjct: 597 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 656

Query: 437 LEQER 439
             +ER
Sbjct: 657 YMKER 658

BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 692.2 bits (1785), Expect = 2.200e-199
Identity = 339/447 (75.84%), Postives = 387/447 (86.58%), Query Frame = 1

		  

Query: 6   SRNSRLSEPKKKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTES 65
           S++S  S  KK++WK+GEFP  +E   PV Q+ RT IKNVKKKLDR++KA  WVNTVTE+
Sbjct: 39  SKSSPGSVTKKRLWKDGEFPGITE---PVNQR-RTPIKNVKKKLDRRSKANGWVNTVTET 98

Query: 66  LSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEG 125
           LSDLI KKQWLQAL+VF+MLREQ+FYQPKEGTYMKLLVLLGKSGQP RA +LFD M+EEG
Sbjct: 99  LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 158

Query: 126 LEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLV 185
           LEPT ELYTALLAAY RS LIDDAFSIL KMK+ PQCQPDVFTYSTL+KAC+DAS FDLV
Sbjct: 159 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 218

Query: 186 ESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIA 245
           +SLYKEMDER I PNTVTQNIVLSGYG+ G+FDQMEK+LS ML S  CKPDVWTMN I++
Sbjct: 219 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 278

Query: 246 LFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPW 305
           +FGNMG+I+MME WYEKFR+F IEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKLEFPW
Sbjct: 279 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 338

Query: 306 TTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTA 365
           TTSTYNN+IEAF+DVGD KNME TF+QMR+EGMKADTKT CCL+ GYANAG+FHKV+S+ 
Sbjct: 339 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 398

Query: 366 QLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKE 425
           QLA + EIPENT+F+NAVI ACAKADDL+EMERVY RMKE+ C  D  TF +M++AY KE
Sbjct: 399 QLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 458

Query: 426 GMSDKIYDLEQERDKMVTATPGDNSSE 453
           GM+DKIY LEQER K++  T      E
Sbjct: 459 GMNDKIYYLEQERQKLMDRTVATKEME 481

BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 335.5 bits (859), Expect = 5.200e-92
Identity = 179/419 (42.72%), Postives = 247/419 (58.95%), Query Frame = 1

		  

Query: 16  KKIWKEGEFPAYSENSIPVFQKKRTQIKNVKKKLDRKAKAKAWVNTVTESLSDLILKKQW 75
           K+I ++      S  +I +  ++      ++KK   K   K    TV ESL + I   +W
Sbjct: 74  KEIKEDKNTKIASRKAISIILRREATKSIIEKK---KGSKKLLPRTVLESLHERITALRW 133

Query: 76  LQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTA 135
             A+QVFE+LREQ +Y+P  G Y+KL+V+LGK  QP +AH+LF  MI EG     E+YTA
Sbjct: 134 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 193

Query: 136 LLAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLYKEMDER 195
           L++AY RS   D AF++L +MK+   CQPDV TYS LIK+ +    FD V+ L  +M  +
Sbjct: 194 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 253

Query: 196 GIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEM 255
           GI PNT+T N ++  YGKA  F +ME  L  ML    CKPD WTMN+ +  FG  GQIEM
Sbjct: 254 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 313

Query: 256 MERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIE 315
           ME  YEKF+   IEP  RTFNIL+ +YGK   Y KMS+VMEYM+K  + WT  TYN VI+
Sbjct: 314 MENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVID 373

Query: 316 AFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPE 375
           AF   GD+K ME+ F  M++E +     T+C LVR Y  A    K+    +     +I  
Sbjct: 374 AFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRL 433

Query: 376 NTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKEGMSDKIYDL 435
           +  FFN ++ A  + +   EM+ V   M++K  +PD  T+  M+ AY   GM+  + +L
Sbjct: 434 DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 330.1 bits (845), Expect = 2.200e-90
Identity = 161/396 (40.66%), Postives = 250/396 (63.13%), Query Frame = 1

		  

Query: 42  IKNVKKKLDRKAKAKAWVNTVTESLSDLILKKQWLQALQVFEMLREQSFYQPKEGTYMKL 101
           +K +++K + +     W   V E+L + I + +W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 91  VKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKL 150

Query: 102 LVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTALLAAYCRSFLIDDAFSILVKMKALPQ 161
             +LG   QP +A  LF+ M+ EGL+PT ++YT+L++ Y +S L+D AFS L  MK++  
Sbjct: 151 FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 210

Query: 162 CQPDVFTYSTLIKACIDASHFDLVESLYKEMDERGIVPNTVTQNIVLSGYGKAGKFDQME 221
           C+PDVFT++ LI  C     FDLV+S+  EM   G+  +TVT N ++ GYGKAG F++ME
Sbjct: 211 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 270

Query: 222 KILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEMMERWYEKFRDFNIEPETRTFNILIGA 281
            +L+ M++     PDV T+N+II  +GN   +  ME WY +F+   ++P+  TFNILI +
Sbjct: 271 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 330

Query: 282 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIEAFSDVGDVKNMEFTFNQMRAEGMKAD 341
           +GK  MY KM SVM++M K  F  TT TYN VIE F   G ++ M+  F +M+ +G+K +
Sbjct: 331 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390

Query: 342 TKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPENTSFFNAVIFACAKADDLMEMERVYR 401
           + T C LV  Y+ AG+  K+ S  +     ++  +T FFN +I A  +A DL  M+ +Y 
Sbjct: 391 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 450

Query: 402 RMKEKHCQPDDNTFAVMIDAYSKEGMSDKIYDLEQE 438
           +M+E+ C+PD  TFA MI  Y+  G+ D + +LE++
Sbjct: 451 QMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486

BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 177.6 bits (449), Expect = 1.800e-44
Identity = 101/353 (28.61%), Postives = 174/353 (49.29%), Query Frame = 1

		  

Query: 74  QWLQALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELY 133
           +WLQ L+VF  +++Q +Y P  G Y KL+ ++GK GQ R A  LF  M   G  P   +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171

Query: 134 TALLAAYC----RSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLY 193
            AL+ A+     ++  ++     L KMK + +CQP+V TY+ L++A   +   D V +L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231

Query: 194 KEMDERGIVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGN 253
           K++D   + P+  T N V+  YGK G   +ME +L+ M +S  CKPD+ T N +I  +G 
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 291

Query: 254 MGQIEMMERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTST 313
             + E ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  T
Sbjct: 292 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 351

Query: 314 YNNVIEAFSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAG 373
           Y  +I  +   G V      F ++          T+  ++  Y   G++ +       A 
Sbjct: 352 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 411

Query: 374 RLEIPENTSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAY 423
              +  + S +  +  A  KAD   +++ + ++M++    P+   F   ++ +
Sbjct: 412 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463

BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 6.400e-42
Identity = 111/365 (30.41%), Postives = 172/365 (47.12%), Query Frame = 1

		  

Query: 77  QALQVFEMLREQSFYQPKEGTYMKLLVLLGKSGQPRRAHQLFDTMIEEGLEPTRELYTAL 136
           +A QVFE ++   F   K  TY  LL + GKS +P+ A ++ + M+  G  P+   Y +L
Sbjct: 297 EAAQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 356

Query: 137 LAAYCRSFLIDDAFSILVKMKALPQCQPDVFTYSTLIKACIDASHFDLVESLYKEMDERG 196
           ++AY R  ++D+A  +  +M A    +PDVFTY+TL+     A   +   S+++EM   G
Sbjct: 357 ISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 416

Query: 197 IVPNTVTQNIVLSGYGKAGKFDQMEKILSGMLQSPTCKPDVWTMNTIIALFGNMGQIEMM 256
             PN  T N  +  YG  GKF +M KI    +      PD+ T NT++A+FG  G    +
Sbjct: 417 CKPNICTFNAFIKMYGNRGKFTEMMKIFDE-INVCGLSPDIVTWNTLLAVFGQNGMDSEV 476

Query: 257 ERWYEKFRDFNIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNVIEA 316
              +++ +     PE  TFN LI AY +   +++  +V   M         STYN V+ A
Sbjct: 477 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 536

Query: 317 FSDVGDVKNMEFTFNQMRAEGMKADTKTICCLVRGYANAGVFHKVVSTAQLAGRLEIPEN 376
            +  G  +  E    +M     K +  T C L+  YAN      + S A+      I   
Sbjct: 537 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 596

Query: 377 TSFFNAVIFACAKADDLMEMERVYRRMKEKHCQPDDNTFAVMIDAYSKEGMSDK---IYD 436
                 ++  C+K D L E ER +  +KE+   PD  T   M+  Y +  M  K   + D
Sbjct: 597 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 656

Query: 437 LEQER 439
             +ER
Sbjct: 657 YMKER 658

The following BLAST results are available for this feature:
BLAST of Spo06958.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902148614|gb|KNA05262.1|2.2e-265100.hypothetical protein SOVF_1920... [more]
gi|731323777|ref|XP_010672616.1|5.9e-23187.0PREDICTED: pentatricopeptide r... [more]
gi|225432159|ref|XP_002274904.1|2.3e-20377.5PREDICTED: pentatricopeptide r... [more]
gi|147820978|emb|CAN74604.1|1.2e-20277.8hypothetical protein VITISV_02... [more]
gi|823247815|ref|XP_012456574.1|8.3e-20178.7PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo06958.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QDB6_SPIOL1.5e-265100.Uncharacterized protein OS=Spi... [more]
A0A0J8CNX3_BETVU4.1e-23187.0Uncharacterized protein OS=Bet... [more]
F6HE37_VITVI1.6e-20377.5Putative uncharacterized prote... [more]
A5BHU7_VITVI8.1e-20377.8Putative uncharacterized prote... [more]
A0A0D2SZ09_GOSRA5.8e-20178.7Uncharacterized protein OS=Gos... [more]
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BLAST of Spo06958.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP216_ARATH3.9e-19875.8Pentatricopeptide repeat-conta... [more]
PP424_ARATH9.2e-9142.7Pentatricopeptide repeat-conta... [more]
PP279_ARATH3.9e-8940.6Pentatricopeptide repeat-conta... [more]
PP358_ARATH3.2e-4328.6Pentatricopeptide repeat-conta... [more]
PP362_ARATH1.1e-4030.4Pentatricopeptide repeat-conta... [more]
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BLAST of Spo06958.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G06430.12.2e-19975.8Tetratricopeptide repeat (TPR)... [more]
AT5G48730.15.2e-9242.7Pentatricopeptide repeat (PPR)... [more]
AT3G53170.12.2e-9040.6Tetratricopeptide repeat (TPR)... [more]
AT4G39620.11.8e-4428.6Tetratricopeptide repeat (TPR)... [more]
AT5G02860.16.4e-4230.4Pentatricopeptide repeat (PPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 239..267
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 270..317
score: 2.5E-7coord: 164..212
score: 3.9E-11coord: 376..424
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 97..140
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 97..129
score: 1.4E-4coord: 132..165
score: 0.0014coord: 380..411
score: 1.1E-6coord: 309..341
score: 6.4E-4coord: 202..236
score: 1.2E-5coord: 274..305
score: 2.0E-5coord: 167..201
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 94..128
score: 10.293coord: 341..375
score: 5.261coord: 411..441
score: 6.665coord: 236..270
score: 9.131coord: 200..235
score: 9.032coord: 129..159
score: 7.728coord: 271..305
score: 8.627coord: 165..199
score: 12.145coord: 306..340
score: 9.471coord: 376..410
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 19..437
score: 1.5E
NoneNo IPR availablePANTHERPTHR24015:SF301SUBFAMILY NOT NAMEDcoord: 19..437
score: 1.5E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009553 embryo sac development
biological_process GO:0009555 pollen development
biological_process GO:0048868 pollen tube development
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0019843 rRNA binding