Spo06045.1 (mRNA)

Overview
NameSpo06045.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionCell growth defect factor 2
LocationSpoScf_04051 : 539 .. 7069 (-)
Sequence length1234
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATTCAAACAGCGATTTAAGCCTCCCTCCTCGTGGTAGAACCAACAAATATTTTGATAAATCGCAGAAGTGATTAAGATAGTAGGAGGGAGAGAAAGAGAGATGGGAAGTAAAGAGAGAGAAAGCAAAGGGTACGCATGGGCTGTTACAGCGGGCTTCATCGCAGCTTTAGCTGCTATTTCCGCAAAGTTTTTCTCTTCTCAGGTGAAATTCTTCATTCTTTAAGTAATTATTGCAACTATTTACCTTTCGATTTATGTTATTGTGATTTTATTTGGGGATTAGATGGGGTTTTGATTAGGCTTAGAGAAAAATTGAATGAAATTAAGCTGCCGAAAATTTGGATAAATTTTGTTAAGTGGTATGTTAAATGTGGTCATCCATGGAAATTAGACTTGGATTTTGTTTATAAGCACTTAAATGGGGTTGATTCGCAGTGTTAAATTGTTTTTTTGTGTTTTGTTTGTTCTTTTTGGGAACTAGTGATGCAATGAAGATCATATATTCGCTTGATTTTTGGTCCGACCTTGTAAGTTGTGAACATCATGAATAATTCCTAAACTTATTTGATGCTAGTTAACTCAAAATTATTTGATGTGTTGATTTAAATTGTGTGAATAAGTTGTGGACAGCATGAATGATTCCCTGGTTATTTTTGAAATGCCGCTGTTTTTTTGAAACAGAAAGGGCGTTGATGGTGAGGTATTTTTCTTAGAGTTTGTCGTAGTGGGACAACATGTTTTTGGTGATGTACTTGAAATTTGATTAGTTAACTTCTACTTTCTAGAATTCTAGTGTGAGCTATTGCCTCTTGGTGTCTATGCAGGATTATAGCTGCTAAAACCTTAACGGTCTATTTGATAGCCGGTAATAAATGGTGGAAATGAGAATAAATCAAAGTATTACTTGGCAAAAACATAACATCATAATGTCCATGGTAATGAGAACTAACTCAAACATGATGTTTTTCTTCATAAATTTGCACTCTCACCCAATACCACTCCCCAAATGGTAATGGATGGTAATGGAAATTTATGAAGACAAAATAATAATTTTGAGTTCACTAGCATTAACATGGGAATGAATGTTGATTTTCCTTACAAATTTACATACAAATTCATTCCGGTTAACAACATTTATAACCGGCTACCAAGCGAGCAGTAAATGGTAGGGAAGATGCATTGGAATGGTCTTTCACATGAGACATTTTAGCCATATCACACTCCCAGAACAAGTAGTTTAGTTCTTTTCTCAGTTTCTCTCATCTTGGAAGCACCCATAACCAAGTACTAGCTTGTGTATAATTGACCAGATACATATGAACCATTGCTATCGACAGTGGTGAATATGACAACATCATTATTTGGTCGGAATAATGTTGTATTGGGACTCATTGCCTCATAGGGAGGTAGAAGGAGAATTTCATTGAAATGTGAGGAGAATTAATAAGAATTTAGCAACAAAAAATGAGGGCTTTTATGTCACGACTCTGGGGTATGGACAACTTAGTTTAGTTGGAAGTGAGTACTTTCACTGACCTCTAGATTCAGAGGCAGGCGATTCTAGTTGATGGAGTCTATTTGGGTGGTAAGGAAATTTTGAAAAAAATTGTAGCTAAAGTGATATTATACAAACAGAATATAAGGTACGTAGTACTAAATACGCATTAAGGTTGCAGGGGCTTTGAAATATGATGTATCAAAATTTATCCATGTGAAATTTGTAAAAGGAAACAAAGGTGAACAGTTAGAAGCTACCTGTGACTCTGTGAGTGTGTGACTTTGGGGAAATGGCGGGACTTTTGCGCTTGTGTTCTTTTTAAGACAGGGGTTAGAAGGAACCTGAGTTAGGCTTAAGTATAATTGTGTTACCCTATTTCAAAATAAATATATTACTGACCCAGATGTTGACTTCGATTCTTTCACTGGATTCTGTATTCCCTGCTGCTTCCCTTTTTCTCTTTTGAGTGCTTTGAATGCTATCGTCAATCCAAGTAAACAACCCTTTTGGAGAACTCTCACTTGTTGTTGGGACCATTCTCAAACTTCTTGGTTGTACCCACTTTGTTTGACAGTCCTGATTGCTAGTGATTGCTGAACCTGTACTTCTTCTTCGGCTTCTGCTGCAAGTTGCCTCAGTGGTTAAGCTTCCTACTGTAAGACTCTAGCTGCCAGCTCAACTTGGGGAGTTGGCAACTTCCTGTTAGACTCTTGTTTTTTGTGCTGGAGTTTGTCATATAAGATTTTATTTTGCCAGTCTAATTTTCTATTTTCTCTCTTCTCAGTTGTAGTGTAGAAGGGCTGCCTTTGGATACAATTTCTGTTGCTGTAATTTATTTGTAAAGAAACTATAATGTAAAACTTATTTCACTGCAATAATAGAGTGGTCGTGTAACACCCCCAATTTACTAACTAGAAATAAATAAGAATATAAAAGACTTTATAATAAATTTGCGGAAGCTTACACCTAAATCGGAGGTATCACCGCCACACTTGATCACATTGTCAAGTGCTAAGGCTTACAATACTCAAACTATTACAACTCGATTACTAGGTGGTCTATTTAAACTGTACAACTGAAAAATATTAAACTGTCATAAAAGACTAAACGATAATATTGAGCTCCTTCAACTTGTAATTGCATCTTTCACGATCGATCTGCTCCAGTCAATCTTGACTGCTCACCATAGTGGACAAATTCCAAAAGGATCGTCGCAGGGCCACCATAAGAAAAAGACATGGCCGCAAACACACATAGCAAATAAACACACACGTCAGCAAAAGGCTGAGTAATCACCTGAAATAAAAACATACCAATATAGAATAATAAATGCTCATTTAAACAATGTAGTATGAAACTACATTTCAAGTATAGTCCCAAAAGAATACTTAGCTCCATAGCCTATAGATACTCTAGATCTTCCTTTCAACTGAACCTCAATATATTGATATAATCTTTTTCCTCTACTAAACTTACTTAAACCAATAGGTGTCATGTTTGCTCTTTGTTCTATACCTAACCTTGGACATGGGTAATTTGAATAAATAAACCAACAAGTATAAAAACTTGAAACTCTCCATAGCTACTAGAAAGACTCTCTAAGTCAAGGCCACTTTTGGACCAAATCCCACTTTGGGGATATTAAGAAAATAATAAAGATTGTATCTTGCTCCTCTACTAATGGTTATCATCTCCTTACCAACATGCCAAAGACTAAGGTCTATCACATTGAGCCTCAAACCCAAAATATAGCGACTTCTCAACCTTCTTATATCTTCTCAATACCCATTTAGGGTTAAAGTATATATTTCTCATTAATGACACATGATCCCAAAATCATATAATACATAACTATATATTCATGCTAATAGGCCAGTAAAACTAATACCAGTAATAATTTCTTAATCAATCCCAGAATATAGACTTAGTACAATACGCTAATCCTTATTTTAGCCAAAATCTATTATTCCTTGAACNCCATGGAAAATCATTTTACATTGAAAAGGTTTTACGTCTTACCAAACGGAGCCTTAGTACAATACGCTAATCCTTATTTTAGCCAAAATCTATTATTCCTTGAACTAACCTAACTAATCTACATAAAATATAACAATAGTAAATCCAAACAAAAATGCCACTCGAATAATTTTTCTGATATCACGCAAGTAGAGATTAGCAGCAACAATTCCAAAAATTTGGGATTACTATATAAACATACATATAAAGAAAACACAGCATATGATCAAATCGGTAAAGTATGATTTCACATAATAACCACTCCTACTACAATCAAACACTTGTGGGAAAAATAAACTGACCATACACTAATAATTCGAAGGGTTAAGTGCGTGTGATTACCTTTCCGAAATAATAATGATATTTCAGATATCGTGTAAAAATGAGATTCGGATACAGGCTTACAACGATTTGGTTGCTTCGACTAGCATGCGGGTAAGGTTGAAGACGAATACTCATGAAATTTGATTAAATATTTCATAATCAATTCCCACGTGAGATGAATATACATGATGATGTGAAATTGATAAAAGGCTAAATGGGTATGAAACATGATTGGGAATATAATTATGATTAGCTTGCCCGTGAATATGTGATAATCTTAATCTCACGCAAAACGAGATGAAAACGGCTGCACTATCACCACATTAAGGTTTAGGGTTAACAAAGACTAAATAACAGACTATATATATATATATATTGTTTATAATTAGAGTCCTACTAAATTTAAAATAGCTCTTTTTAAACTTTCCGAAAATATTAAAAGAGGTCTAACTAAAAACGGAAATAATAACATTTTTACTATAAAATATATTTTACCAAATTATAAAATATTGGGATATTACAGGTCGACTGAGTGAGTTATGATTGTTGAAACGAGGGTGATACTTCCCGATGCGACGCTTAACAGTGTTTTGGGCTGATGTACTTGTCATACGAAATGGCAAGTCGCCAGGTCGAACATTTACCTATTGTTTTTGACATATACAGTGAAGTTAATTTATTGGCATTATTGAGTTTTCTTTGATTTCAGCTTTTATAATTAGAGCAAGAGAATCCCCCGTTTCTAGTGTGTCATACTCAGTGTTACATAATTCCCTAATCTCCCTGCGAATTGCGATCCGAAAAGAGCGAAAGATGGTCAGTTTTCGCCTATTTTTGTCCCATTTTGGGCAAACCTCGAATTGAAAAGGCTAATTATATAGCGAATTATGTTACACTGGTCATACTTGTAGATTGGATATTTCACTGGGAACTCTTGCCATAGGTTTGCTGGATTTTTAAGCCATGCTCTGAATGTAGTTGTCAACTTGTCATGGTGAAAGGATGTGTGCCAACATAATTCTTGTACAGAAAATCACACCACTTATTTGCTTATGCAGTTGCATTTTCCTGTTCTTGGACAGTCTAATTAATTTGCTGGACATTCTTTTCACCAGATTGTGAAATACAGCCTTGTGATTATGTTCAATGTGACAATGTGGGGATGCTACATCAACAGCCTTAGAGCGCTGTCATCTTTACAAGCTACAGTGACAAACTTTGCAACGAATTTTCTCTCGTCTGGTCTGGCTGGTTATTTTCTTTTCGAAGAAACCCTACCAATCAAGGTAAAGATAGTGTCAGTTCGGAGATTGCCTTTGTTCGACAGTTTTTCCTTCTGTTCATTCCATATTTGTTAGACAATTATGTCTGCCTATTCTCTGATCATGACTAATTGATACACAATTTGTCTACATCGTATTTAGCTAAACTATGCTAGCTTACTGAAATATTTGGTTCTTTCATGGACAGTAATACTAATCAACATGTTTAATTCTTCAGTGGAAGTTAATTAACATATTTAATGCTGCGGCTGCATTACAGAAAAGGTTTCATTTGGTTATTCCTGGTAACGGAAACTGAAGATGAATACCTGGTTCTATTTGTCTGTAGTAATTAATTCTTGGTTCTTCCATGGAAGTATGTCTCAATTCAATTGCTTGGTCTTATAGATCCACTAGAGTTGTGTTGGCTTCAATCTGCTTTCCCTGCAGTTGTTTTCTTCGTGATACATATCGATTTCCTAGCATTCTTCCTTTTATGCTTTACCAATAATGCTATTATCATCGCTAATGCACTAACTACAAATCTGTAATTCCCAACTCTGGCAACAGTGGTTTGCAGGTGCCTTGCTGATTGTAGTAGGTGTATTCATACTCACTAAATCAAGCATAGAGAAGAAAACAAACACTGATTAGATGTGTGCATGTGATGGCTGTGCGAAACATCTTCCATTTTGGGATGTGTATACCAAAGTAAGAACCTCGCGGTCATTATAGCACAATAGATATCCAGTCAAGTGCAACTAATCAGAAACTTTTGCCCCCATGAAAAAATTTCAAGTCTTACATGTCTACATTATACAATTAGTTTTGAGTATGCTACGGGATTTCTCTATGTCAATTCAGCATTCGGAAAAGAAGATGAATACGTCATGAATCTCCAAGCTACGACTCCTTTATGCCACGCTTCACACAGAAATAACTTGTCCATGTCTGATATTGTTCTTTTGTAGGTAGAAGTTCCCCCTTGGAAATGTTGGTACTCCTCTACAACTTGGGTTTGCTTAAATGAGATACATTGATTTGTGTATCCTCAAGTAAGTGGAAGCATGTCACTGTTGTAACCCTTTTATAAGTGAAAGTATAAAGTGCAGAATATGATTCTGTAAATCTTAGTGATTAATAAGTGGTGAACAGCTTGGAGAAATATGAGTCATATGTCCAAAGAGATTCAATTGAAAATGGACAAATTTCTTCTTATTTAATTTTTGCATTTATAAGACATAACCTGCTATTTTAGTAATCCCATAGTTTGTTGGGATTTCTTTATTTGGAAATTCAGATTATATTAATAAAAAAATATGAGGAAGTTTTATGTCCTTGTAATTGGTTCATTTAAAGGTGAACAAATTGTAAACCGTTTCTTCCAACGGAGCCTTCGCCTAAAGCTCTGTGCCGGTCAAACCACGAC

mRNA sequence

GCATTCAAACAGCGATTTAAGCCTCCCTCCTCGTGGTAGAACCAACAAATATTTTGATAAATCGCAGAAGTGATTAAGATAGTAGGAGGGAGAGAAAGAGAGATGGGAAGTAAAGAGAGAGAAAGCAAAGGGTACGCATGGGCTGTTACAGCGGGCTTCATCGCAGCTTTAGCTGCTATTTCCGCAAAGTTTTTCTCTTCTCAGATTGTGAAATACAGCCTTGTGATTATGTTCAATGTGACAATGTGGGGATGCTACATCAACAGCCTTAGAGCGCTGTCATCTTTACAAGCTACAGTGACAAACTTTGCAACGAATTTTCTCTCGTCTGGTCTGGCTGGTTATTTTCTTTTCGAAGAAACCCTACCAATCAAGTGGTTTGCAGGTGCCTTGCTGATTGTAGTAGGTGTATTCATACTCACTAAATCAAGCATAGAGAAGAAAACAAACACTGATTAGATGTGTGCATGTGATGGCTGTGCGAAACATCTTCCATTTTGGGATGTGTATACCAAAGTAAGAACCTCGCGGTCATTATAGCACAATAGATATCCAGTCAAGTGCAACTAATCAGAAACTTTTGCCCCCATGAAAAAATTTCAAGTCTTACATGTCTACATTATACAATTAGTTTTGAGTATGCTACGGGATTTCTCTATGTCAATTCAGCATTCGGAAAAGAAGATGAATACGTCATGAATCTCCAAGCTACGACTCCTTTATGCCACGCTTCACACAGAAATAACTTGTCCATGTCTGATATTGTTCTTTTGTAGGTAGAAGTTCCCCCTTGGAAATGTTGGTACTCCTCTACAACTTGGGTTTGCTTAAATGAGATACATTGATTTGTGTATCCTCAAGTAAGTGGAAGCATGTCACTGTTGTAACCCTTTTATAAGTGAAAGTATAAAGTGCAGAATATGATTCTGTAAATCTTAGTGATTAATAAGTGGTGAACAGCTTGGAGAAATATGAGTCATATGTCCAAAGAGATTCAATTGAAAATGGACAAATTTCTTCTTATTTAATTTTTGCATTTATAAGACATAACCTGCTATTTTAGTAATCCCATAGTTTGTTGGGATTTCTTTATTTGGAAATTCAGATTATATTAATAAAAAAATATGAGGAAGTTTTATGTCCTTGTAATTGGTTCATTTAAAGGTGAACAAATTGTAAACCGTTTCTTCCAACGGAGCCTTCGCCTAAAGCTCTGTGCCGGTCAAACCACGAC

Coding sequence (CDS)

ATGGGAAGTAAAGAGAGAGAAAGCAAAGGGTACGCATGGGCTGTTACAGCGGGCTTCATCGCAGCTTTAGCTGCTATTTCCGCAAAGTTTTTCTCTTCTCAGATTGTGAAATACAGCCTTGTGATTATGTTCAATGTGACAATGTGGGGATGCTACATCAACAGCCTTAGAGCGCTGTCATCTTTACAAGCTACAGTGACAAACTTTGCAACGAATTTTCTCTCGTCTGGTCTGGCTGGTTATTTTCTTTTCGAAGAAACCCTACCAATCAAGTGGTTTGCAGGTGCCTTGCTGATTGTAGTAGGTGTATTCATACTCACTAAATCAAGCATAGAGAAGAAAACAAACACTGATTAG

Protein sequence

MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo06045Spo06045gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo06045.1Spo06045.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06045.1.utr5p.1Spo06045.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06045.1.CDS.3Spo06045.1.CDS.3CDS
Spo06045.1.CDS.2Spo06045.1.CDS.2CDS
Spo06045.1.CDS.1Spo06045.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06045.1.utr3p.1Spo06045.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06045.1.exon.3Spo06045.1.exon.3exon
Spo06045.1.exon.2Spo06045.1.exon.2exon
Spo06045.1.exon.1Spo06045.1.exon.1exon


Homology
[Close]
BLAST of Spo06045.1 vs. NCBI nr
Match: gi|902202548|gb|KNA14305.1| (hypothetical protein SOVF_108700 [Spinacia oleracea])

HSP 1 Score: 225.7 bits (574), Expect = 4.200e-56
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS
Sbjct: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD
Sbjct: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 118
[Close]
BLAST of Spo06045.1 vs. NCBI nr
Match: gi|731311745|ref|XP_010670876.1| (PREDICTED: transmembrane protein 42 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.4 bits (503), Expect = 7.200e-48
Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           MGSKERESKGYAWA+ AGF AALAAISAK+FSSQ+VKYSLVI FNVTMWGCY+NSLRALS
Sbjct: 36  MGSKERESKGYAWALAAGFTAALAAISAKYFSSQLVKYSLVIAFNVTMWGCYVNSLRALS 95

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFA NFLSSGLAG+FLF ETL  KWF GA LIVVGVFILTKSS+EKK NTD
Sbjct: 96  SLQATVTNFAMNFLSSGLAGFFLFGETLSTKWFTGAFLIVVGVFILTKSSLEKKENTD 153
[Close]
BLAST of Spo06045.1 vs. NCBI nr
Match: gi|870869776|gb|KMT20521.1| (hypothetical protein BVRB_1g005050 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.4 bits (503), Expect = 7.200e-48
Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           MGSKERESKGYAWA+ AGF AALAAISAK+FSSQ+VKYSLVI FNVTMWGCY+NSLRALS
Sbjct: 1   MGSKERESKGYAWALAAGFTAALAAISAKYFSSQLVKYSLVIAFNVTMWGCYVNSLRALS 60

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFA NFLSSGLAG+FLF ETL  KWF GA LIVVGVFILTKSS+EKK NTD
Sbjct: 61  SLQATVTNFAMNFLSSGLAGFFLFGETLSTKWFTGAFLIVVGVFILTKSSLEKKENTD 118
[Close]
BLAST of Spo06045.1 vs. NCBI nr
Match: gi|359492195|ref|XP_003634377.1| (PREDICTED: uncharacterized protein LOC100259103 isoform X1 [Vitis vinifera])

HSP 1 Score: 181.8 bits (460), Expect = 7.000e-43
Identity = 89/113 (78.76%), Postives = 105/113 (92.92%), Query Frame = 1 

		  

Query: 6   RESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQAT 65
           ++S+GYAWA++AG  AALAAISAK FSSQ++KY LVI+FNVTMWGCY+NSL+ALSSLQAT
Sbjct: 4   KKSRGYAWAISAGVNAALAAISAKLFSSQVIKYGLVIIFNVTMWGCYVNSLKALSSLQAT 63

Query: 66  VTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           VTNFA NFLSSGLAG+FLFEE LP +WFAGALLIV+GVFIL+KSSIE+K +TD
Sbjct: 64  VTNFAANFLSSGLAGFFLFEEALPFQWFAGALLIVIGVFILSKSSIERKASTD 116
[Close]
BLAST of Spo06045.1 vs. NCBI nr
Match: gi|702435261|ref|XP_010069844.1| (PREDICTED: uncharacterized protein LOC104456688 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 176.8 bits (447), Expect = 2.200e-41
Identity = 86/113 (76.11%), Postives = 102/113 (90.27%), Query Frame = 1 

		  

Query: 6   RESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQAT 65
           R  +GYAWA+ AGF+AALAAISAKFFSSQ++KY  VI+FNVTMWGCY+NSL++LSSLQAT
Sbjct: 4   RIGRGYAWAIAAGFMAALAAISAKFFSSQVIKYGFVILFNVTMWGCYVNSLKSLSSLQAT 63

Query: 66  VTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           VTNFATNFL+SGLAG+FLF+E+L  +WFAGAL IV+GV IL+KSSIEKKT  D
Sbjct: 64  VTNFATNFLTSGLAGFFLFDESLRYQWFAGALFIVIGVLILSKSSIEKKTRVD 116
[Close]
BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R465_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108700 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.900e-56
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS
Sbjct: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD
Sbjct: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 118
[Close]
BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FXZ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g005050 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.000e-48
Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           MGSKERESKGYAWA+ AGF AALAAISAK+FSSQ+VKYSLVI FNVTMWGCY+NSLRALS
Sbjct: 1   MGSKERESKGYAWALAAGFTAALAAISAKYFSSQLVKYSLVIAFNVTMWGCYVNSLRALS 60

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFA NFLSSGLAG+FLF ETL  KWF GA LIVVGVFILTKSS+EKK NTD
Sbjct: 61  SLQATVTNFAMNFLSSGLAGFFLFGETLSTKWFTGAFLIVVGVFILTKSSLEKKENTD 118
[Close]
BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Match: E0CPJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13700 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.900e-43
Identity = 89/113 (78.76%), Postives = 105/113 (92.92%), Query Frame = 1 

		  

Query: 6   RESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQAT 65
           ++S+GYAWA++AG  AALAAISAK FSSQ++KY LVI+FNVTMWGCY+NSL+ALSSLQAT
Sbjct: 4   KKSRGYAWAISAGVNAALAAISAKLFSSQVIKYGLVIIFNVTMWGCYVNSLKALSSLQAT 63

Query: 66  VTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           VTNFA NFLSSGLAG+FLFEE LP +WFAGALLIV+GVFIL+KSSIE+K +TD
Sbjct: 64  VTNFAANFLSSGLAGFFLFEEALPFQWFAGALLIVIGVFILSKSSIERKASTD 116
[Close]
BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Match: A0A058ZTK1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01253 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.500e-41
Identity = 86/113 (76.11%), Postives = 102/113 (90.27%), Query Frame = 1 

		  

Query: 6   RESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQAT 65
           R  +GYAWA+ AGF+AALAAISAKFFSSQ+VKY  VI+FNVTMWGCY+NSL++LSSLQAT
Sbjct: 4   RIGRGYAWAIAAGFMAALAAISAKFFSSQVVKYGFVILFNVTMWGCYVNSLKSLSSLQAT 63

Query: 66  VTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           VTNFATNFL+SGLAG+FLF+E+L  +WFAGAL IV+GV IL+KSSIEKK+  D
Sbjct: 64  VTNFATNFLTSGLAGFFLFDESLRYQWFAGALFIVIGVLILSKSSIEKKSRVD 116
[Close]
BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Match: A0A059AXG9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01040 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.500e-41
Identity = 85/113 (75.22%), Postives = 102/113 (90.27%), Query Frame = 1 

		  

Query: 6   RESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALSSLQAT 65
           R  +GYAWA+ AGF+AALAAISAKFFSSQ++KY  VI+FNVTMWGCY+NSL++LSSLQAT
Sbjct: 4   RIGRGYAWAIAAGFMAALAAISAKFFSSQVIKYGFVILFNVTMWGCYVNSLKSLSSLQAT 63

Query: 66  VTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           VTNFATNFL+SGLAG+FLF+E+L  +WFAGAL IV+GV IL+KSSIEKK+  D
Sbjct: 64  VTNFATNFLTSGLAGFFLFDESLRYQWFAGALFIVIGVLILSKSSIEKKSRVD 116
[Close]
BLAST of Spo06045.1 vs. TAIR (Arabidopsis)
Match: AT1G30845.1 (unknown protein)

HSP 1 Score: 151.0 bits (380), Expect = 4.600e-37
Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 1 

		  

Query: 1   MGSKERESKGYAWAVTAGFIAALAAISAKFFSSQIVKYSLVIMFNVTMWGCYINSLRALS 60
           M     + +GY  AV AG  AALAAISAKFF+S ++KY LV++ NV MW CY+NSLRALS
Sbjct: 1   MADAHLKQRGYISAVAAGLNAALAAISAKFFTSLVIKYGLVVICNVVMWACYVNSLRALS 60

Query: 61  SLQATVTNFATNFLSSGLAGYFLFEETLPIKWFAGALLIVVGVFILTKSSIEKKTNTD 119
           SLQATVTNFA NFLSSGLAG FLF+E+L  +WFAGAL I  GV IL+KSS++KK ++D
Sbjct: 61  SLQATVTNFAANFLSSGLAGLFLFQESLSFRWFAGALSITTGVLILSKSSVDKKVSSD 118
The following BLAST results are available for this feature:
BLAST of Spo06045.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202548|gb|KNA14305.1|4.2e-56100.hypothetical protein SOVF_1087... [more]
gi|731311745|ref|XP_010670876.1|7.2e-4886.4PREDICTED: transmembrane prote... [more]
gi|870869776|gb|KMT20521.1|7.2e-4886.4hypothetical protein BVRB_1g00... [more]
gi|359492195|ref|XP_003634377.1|7.0e-4378.7PREDICTED: uncharacterized pro... [more]
gi|702435261|ref|XP_010069844.1|2.2e-4176.1PREDICTED: uncharacterized pro... [more]
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BLAST of Spo06045.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R465_SPIOL2.9e-56100.Uncharacterized protein OS=Spi... [more]
A0A0J8FXZ8_BETVU5.0e-4886.4Uncharacterized protein OS=Bet... [more]
E0CPJ4_VITVI4.9e-4378.7Putative uncharacterized prote... [more]
A0A058ZTK1_EUCGR3.5e-4176.1Uncharacterized protein OS=Euc... [more]
A0A059AXG9_EUCGR4.5e-4175.2Uncharacterized protein OS=Euc... [more]
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BLAST of Spo06045.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo06045.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G30845.14.6e-3765.2unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31965FAMILY NOT NAMEDcoord: 5..118
score: 1.4
NoneNo IPR availablePANTHERPTHR31965:SF1TRANSMEMBRANE PROTEIN 42coord: 5..118
score: 1.4
NoneNo IPR availableunknownSSF103481Multidrug resistance efflux transporter EmrEcoord: 32..110
score: 1.1

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane