Spo22988 (gene) | SpinachBase

Overview


Name	Spo22988
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	COP9 signalosome complex subunit 3
Location	Super_scaffold_71 : 239101 .. 255429 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATATGTCCATGTGTATTGTCCACGTAAGCTGGGTAAACTACCCGGTGGGTAGATGTAGCTTTCTCCCAAATAAAACCCCTCAAAATCTCAAATTGTCAATATCGATAAAAGCCCCTCAAAACACACTCTCTCTCTCCTCTTGATACTCGCAATACCCCACCTTTTCCCGAAGACACTGCGGCCATGGATACGGTGGAGAAGCTGGTGGCGCAAATCCAAGGGCTTTCTGGTAGCGTCGGAGATTTGAATCAACTCCACCATATCCTCAAACAATCCGAAGACTCCCTTCGTCTCAATTCTTCTCGCTTGGCCCCTTTCCTCCATCAGCTCGACCCTTCCGTTCACTCTCTCGGATATCTTTACTTCCTGTAAGTCCCCTTTTTATCTCGTATTATTTTATCTTTTACAATAAGTTTTATCATTTGAGTTTTTGCAATTAGTTTTGCGTTGATATTAGAGGATTGCATTGAATTTTATTGCACTTGTAGTTACATTAGGTTTCAATGCGAAAGGAGGTGATTCTAATTTGAGGGTTTTTGTTGATATGATTCCCATCCACGATATTGCTTTGATTTTGGTTCATATGAGCAGTACGGATTTTTTAATTGTTGGAATTATTTGTGTTATTGCGGGAGCTTCTTTGAAGGCAACGGAAGGAATCGTGTTAGTTCCTGAATAAATTTGTCATATTTAATCTTTTGTGCGGCACTGCAGATTATTTATGGATTAGGTTTTATGGAATTTTAATTATTTTCAAGTGATGGGTTGTTGTGGGTATCGTTACAAATTAATATTCTGTTGTATTGTGTTCCTGTTGGAACTTGATTATATTGCATCCTTAACCGAGCTGATTGCTTGTGAATTTCATTTTATGGGTTATAGTGTTTATTTATTTTTATCACCTGATTGTGAGTTTCCTTGTTCGAGCTGCTATTTCTTTTGAGGGGACGGGGATTTAGGGTGGCTCTTATGTTCTTGCCACCACGTTGTTAGGAGTTTTGTTTCGTAACTGAGAGGTTGGTAGTTTAATTGAGAACAAAGTAAAAAGACCATGTATAAGGCCTTTGCTAATCTGAAATATCTTATCTAAGCATAAGTGTTGTATCACAGCCATTGGCAAAGCATGAAAGGACCTCTTGATTTTTCTATGGAGGAGAAGTGGTGTACAAAGAACATAATGGGTTGACTTATTGCTTTTAACAACTTTGTTAACGCCTTAAAGTTTGAAGAAAACTTGCACTCTTTTTTGGCGCAATTTGTTTGATGATCGCTATTACATTGCAATAAATCTTACAATTCATTACTCCTTCCGTCACTGAAAGATCACCCAGTTCCTATAAATGAATGTCCCTCTTAAATTGCCCATACCCTATTTGGTTATGTTGTCCCCACCGTTTAATCTACATTACCCCACTCAAAACAATGCACTTAATCTCTCCTTTCTTTTTCTGACCCATCTATCTCCTCTCTTCTGGTACATATCTCAATCTTCATCTCTTCATCCATCTTTTCCCTTTTATCTCTCTCATAATCTCCTCACCCAGGCCAATTTCTCCTCTTCATATTTTGGCTTTTTATTCTACAGCATTCTCTCTCCTCATATTAATCTCTTTTTTCTGAATTTACCTGATAATAAAATTACAAAGATCTGGAAAAAAGTCCGGTTCTTCTGAAAATTAAGGCTTTGTGTTTTTCTTTCCTTCTCTATTCCTATTTTGTTCTAACCAAAAAATTAGAGTTATGTTATTTTTTTTTCTTTAACATATGTTCCTATCTTCCAAAAATTGGGGGTTTGTAATGTGATCTTCCCTTTGTTTTTCAATTAATTAGGGCTTCCTCTCTAATATCTCCTTTTTGTAATATAAATATAAGCAAGATCTTGTGGTATTGTGTAAAGAATCGAACAGATGATGAAAACTGGAAGTAAAGCTCGAAATTAAAAATGTTTTCTTTCACATTTTCAGTACCCAGGTGATGTTTGGAGTGGGAAAAAAAATACTGTTGATTTGTTACTCCACCATTGTTGAGAGGAGAAAGTGAGTAAGAGCGACAAAAGCTGGGTTGGGTTAGGTAATAAGCACCACTCTCTCTCTCATGTTTAAGGGATGGAGGGAGTATTTTTATTAGAATTTTAACATCATTGTTATATATAGGTGAGGGGAATGGAAAATTGCACATAATCAGTTTCTTCCTACTCTTTTTTCTACATTTATTTAAGCAATGCATCCTCCATATCTCCCTCCGTTGCATTTCAATCTTTCATCCTCACAGCTCAATAAACTGACATCTACATAACCGACATTTACAAAGCATTTATCTTTATTCCCTCTTCCCATCTTGGCCATGGCCCTGTTTGGTTAATAGCGGATTTGATAGCTTTTAGCGGATCGGAGCACTTTTAGAGGTTTGACCACTTCAACTTGTTAATTCACGTGTTTGGTTGTGCACGGATTTGAATAGCGGTTTGATCCGAAAACTCTAATTTCAAGAAAGCTAGATAGATGAGCTTTTTCACTTAGTGGATGGATGAATAGTGGATTGAAGAATAAACACTGAAAGACAACTTTGCCCCGACCTTTTTTATGTTCCTCCTATATTCGGTCCTCCTCCATGCTCTTTTTCTTCCATACAGGATTCAAGCTGATTCAAGCTTACAATTGGAGCCCAATTTCACGTTTCGCGGACTTCATTATTTCTCTAAGCCTTTTCTTTATTAATTACATCTAAATCTAAATCTTTGGCCAAAGAAGAGGGGAAATTTTATTTCTTTACAAAATTTTAGATTCGACTTGGATTAAGAAAGGAAGAGGGTAGTTTAAAGAAGAGGATGATGGAAGGGGAAATAAAGAGGATTGAATATGATGTACAATCAAAAAAATAGTTTCTACGGAGTATAAAAATAGTTAAATCTCACATACTTTGAGCTTTCGATATGGTGTGAAAGCATGATTTACCTCTCACAATAAAATAAAACTCCATAGTTGCATGATAGAGAAACAGTTGAGGAGGATATAACTTAATAAGAAATTGATGGGGTTTTGCTCCTATTTTTTTTATGAGAGAAAATGATCATAAGGATGAAGGGTTGAAAAAAATTAGGAGGTGAATACACAATAGAATGGAAGAAGTGGTGGCTGGATGGGGTGTTAGAGGTGGGATAGGTGAGTAAATGTTTTATGAAAGTCCTTTTCTTTATCTTTTAATTTTATTAAAAAATAATTTTTAATATCTATCTTGTTATTTTACCGCACGACAATTCGACCGACGTTGTTATACGGCATGGAATGCTGGCAGTGAAACATTGTCACGTGCATAAGATGAATGTGGCGGAGATGCGCATGTTACATTGGACGTGTGGCCATACAAGTAATGGTCGATTGAGGAATGAGATTATTAGGAAGAAAGTAGGGGTTATTGAGATTAAGATATGGAAAATCGTTTAAGATGGTTTGGACATGTAAGAAGAAGATCAAGTGATGCCCCGGTTAGGAGGCTAGAAGGGTGGCAAAGTGATAGGATTGCAAGGGGTAGGGGAAGACCTAAGAAAACTTGGAGGAAGGTGATTGATCACGATATGAACCTACTTGCGATTGAGGAAAGTATGGCGTTAGGATAGGACAGAGTGGAGGGAGAGAGTATACGTTAATGACGTTATCTGACTTATACATCTCTCATTTTGACCCTCTTAGTTTTACTTCTTGCGTTTTGTAAACCTTTTTTTTTCTTTTTTCTTTTTTCAAGGCTCACTTTTATATGCTATTTTCAAATGTACTTATTGTATTTATTTTTAATTTTCTCGTTTTAAATTTTACTTATTTTTATTAACCCTTATAATTTTTTTCCGTAATATATATGTTATCTCTTATTTTCCTTTCATTTCTTTCACTTTCCCCGTCTTCCTTGTTTATTCTTTTAACTTCCCGTTCCTTTCTTGTTTGATTGGTGACTTTGACGATCTCCTATGACGATTTATGTTAGCAGACCCCAAATCATTTTGGGACTAAGGCTATCTATCCTTTTATTTTCTCTGATCTTTAATTTTTTTTAATAAATTTTACCTTTTAGATATTTAGTTATTTCATACTTGAAGTGGATGTTTTTTTTTCAAATCACCACATTATTTTTATTATTTCAAGATTAGTTTCTTTTGGTAAAAGTTGTTAGTGGGATTAATAAATTTTTGTTTTTGTGTAAATGTTGTTTAATTATTTTTTTCTCCACAAAAAACTTACCATATATCCATTTTAGCAATTACTAATTCACCACAATTAAATAAGTCAATGTACTTGTTGGTCATTTACTCAATCAAACAACTATTACATATCAACTATTTATCAAACACTTTTATACAACCAACTAACACAATCAGCTAATCAAACCAGCTAATGCAAAATAGCTAGTCAAAACTGCTAATACAATCCTCTATGGCTAACAGCTGATTGCCAAACATGACCTGTATCTTCACCCACCTCTTGCTTCCGACATCTCAACTATTTCTGCATCTTTTCGGTGCAATATCAGAGTTCACTTGATTACAACTTTTTAAGGGATACTAAAATTACATCTGAATCTATTTGTGATCTGAAATGCTCAACCAGTATTGATGCACTTAGAAATTGATAGTTTTAATGATCTAAAATACTTCCTCTGTTTTTTTAGTTGTACTATATTCCCTTTTGCATTATTCACTTTGATCATCTTTGGTTATACGTGCATTAAGAAATACATAGTCATATGGTATCTTAATAGATTTGTCTTGATATAAAATTTCAAAATATCAACTTTTATAACTTATTTATTGATAATTAAAGATATTGATGGTCGAAGTTGGGTATTGAAAATCGCGTAGGTTCAGATCTGCTATGTTTAGGACTTGTTGATCATTATTTTTTGAGTTTTAAAGGGATGTTATGTATTGACTGATGCTTCTTCTATGGAGTCAATATGGCCGTTATGGGCCAATATAATGATATGGATGATATGGCCTGCGTAATTATGAAGGCGCATAAGAAACTCTTCACTCATTAGGGAAATAGAGTTTGCTTCAACGATGCATGAACGTTTCTGCAATTGACTTAAAACCCTTGAAGGGGGTGGGAGGTGGGGTGAGAGGGTAGTGGAGGGAGGAGAGGATTCCAACTTAGTTGCTTTTGTCCTCCAACTCTGCTAGTTAAAACATTATATTTTTACATCCATGTTTATAGTGCAAAATGATCGCTTTAATGACCAATTGGCTTAGGTTCTCTTGAACTTTTAATTTATCTTTTGGTTAACATCTGCAACATTCTAATGGTTTTACCGGTCATCTAAAAGGGAGAAAAGCAACTGACCATGTATCAATTTGTCTCAAAACTGTTACTTGTACTTATGAAGTCGGTTTAAGCTAACAATTGATCTTGAAATTGTATTGTTAGTTAATAATCGCTACTAGTTTCTTATGTGATAGAAACAAAGTTAGTTATGGAAGGGCGATTTTGTGAAAAGCACTGCGATCCTTGGCAAGTTGCAAGGCGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGTGTCCATTGCTGTGTCTGAACACCAACTTCAGCTTATGTGAATCTTGAAACAACTCCTTGGGTTTGATGACGCAAATAACTGAATAAGTATCTAGAATCCACTTTATGTAGAAATAATACTAGAGAAGAAGTGCAAAAGGTAATGTTGGTGGTTCTTTAGTTTAGTTAGACTAATTTTTTGTTCCTTGCTAGTATAATGCTGTGGGAGTACTTTCAGGAGGTAGATTTTCTTTTAAAATGTCATTGCAGTACCTACAATTTGTATGTTTAGTGGGGAACGTCATCAATTTATCCCTATAGTAGTTTGGTATATGTCTATAATGCCAAGCAGGGCCATGTCATATGCTGTTTCCCTTATCCACAAATTTAAGTATTAACCTCCTGATAATCTTAGCTTTTATATATGTCATTGGCAGGGATGCTTACACATATTCAGTATCAAGAGATGGAGCTAATGAGGTGGCTCTTTTATTGGCCAGATTTATTAGTTCTTGCCTGGCTGAACAGATCCGACTTGCACATCATAAATGTATGTATTTCTGTAAGGATATAGTTAAAACTTGTATTCTTGTACCTATAATCTGACTATGTGATGCTTTTATGAGGTAGTTATAAGTGTCTGCAGGAGGTTTAAGGACCAAGCTATAGTGCTTTCAGAGCCCATGAGAGCTGTTGCCCCAATGCTGATAGCCATCCGTAAAATTCGGCCTTCTTCCGAACACCTTACAACTCTGCATCCTGACTTTCTCCTTCTCTGTATTTTGGCAAAATGCTATAAGACCGGTCTATCTGTGTTAGAGGATGATGTCTTTGAGGTTGATCAGCCGAAGGACCTTTTTCTTTACTGTTACTATGGGTAAGTTGAACTTTGTTTATCATGTTATATCTCGTCTATCTATCATGTTATATCTCGTCTATGGACCTTTTTCTTTACTGTTGCTATGGGTAACTTGACTAACTCGAAAATGGTCTCTCCGCTTCCGTTATCAGGAAAATTTAAAAACTTAAGTCTTATTGTAGTTATCTATACATATCAATGAAAATTATTGTACACTATTAAGTTAGGGCCTGTTTGTCTCAACTTATTTTAACTTATTTCATCAAAAATAAGTCCAGGTAAGTTAAGCAAAACTAAGTTGTTTCCAAAAAAGTAAACATGCAAATGAGTTGTTTTCCGCAAAAATAAGTTCAAACAAATTCAGTCAAATTCAATTTAACCAAACAAAGCCTTAGGTGGGTTCTTTACAGAAAATAGGAAGAGTAAGGTAGTTTTTTCTAATTCGTTTGAGGGTTTTTTATGAAGTATACTTTTCTCTATAAAAGGTGTTGAACTTTAGTATAGATTTAGGCTCTGATAATCATTCTGGATAACCCCTTAGTCCTTCGTCTCAGGCTTAGCAAGGAGAGGAAGTTTTCCCTCCCCACCCTTGTTCATGCGTTCACATTAGGAAATGAAAGAAGGGTCACTTTGCACTTTAGAGACCTATGATGTCAGGAACTCTTTCGTCTTTTGATTGTCTTTTGAGTTTTGACTGAATAAAATATGGACTAAGGCACTCTATAGAAAATGTAGTGACGGCTTATCTTGATTAAGAATTTGAGGCTTTGAGCTCATGCATCCAGAATAGGTAATCACTTCTAAGTTCTAAAGCAATTTCACTTTAAGAAATAACCATACACTGGTGGACTGTAACTACCTAGATGGTAAAGGTGGCTGATTGAGCATGGTGAAGAGCATCCCGAAATTTAGTATTAATGCGCTGAGTTTTTTTGTACAACAATCAAAGGAAAGCTAGCCCAGCTATTCCTAAATCCTGGAAAGTTACCGACTAAATAAAGATATAGGTCAGTTGAATTGAAGGTCATCAGCTAAAAAAGGAGAAAAGAAGGAAAAAAAAGTTTGTTTGTATGCAGTTCTCTAAATTGGAGTCCGACATACCTAAAGTAAGCATCCTACCGAGTCTGTAGGTGGCTGTTAAATTGAACTAGTGAAATAGAAACTGCATAAGATTATAATTATTTACTTGATGATCTTGAATACGAAAGAGTAGGAGTTGATAAGATTGCCTTCTAGATGGTTAGTTCCTCTGATACCCCAGCCCCCAGCCCCAGGATGTTCTTGACTTCTTGTTGTTGATAAGTATGACATGTTCCCTTATCTTTTGATCTTTCGTTTGCTTTGCGTAGAGAAAAATGTCATTGGTTCTTTTGATGGATTGTTGAAATTAAAATTACTGATTATTTTGACTAATGTTCGCAGGGGAATGATTTGTATCGGACTAAAGCAATTCAAGAAAGCATCAGAGTTTTTCCACAACGTGAGTCATTTCTTGTGACTTGGAATCCTATTTTTATATCCTAGCTTATGGTAAAATGGTTTTATTGTGTGAATTTTAACAAAGTGTTATACATGATGGATGATGCACAGTTTTAGTAATACTTCCTCCGTACTTTTTTAGTTGACACAGTTTGACTTTTGACACTATTCATATAATCTACTTTGACTGTCAATTGTGATTTATACTTAAGAAAAAATATGGTCATGTGGGGTTTTGTTATAATCACCTCATCGTATAGATTTACAATATCAACTTTTTTAAATTTTTACCCATTGATAATTAAAGATATAAAGATATAAATGACAGAAATGTTGCATTGGCAAACGTGGTAAATAAATGTGTCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCGGCACCGCCTCTTGTGTTTGTGTACCATACCCAGGTAGTGTGAATAGATGGAGTACTTGGTAAGGCCTTGTGACAATTGTACTGTTTTTACGTTTTTGGCAGGTGGTTACTGCTCCTATGTCTACATTAAATGCAATAGCTGTTGAAGCATACAAAAAGTACATATTGGTTTCACTAATTCACCGTGGGAAGGTATTTGTTTATCTCTATGAACTTTATGTTTAAGGGGTTTGCAGTCTTTATTTGACATCCTGAGTATAGATCTATTATGAGGTTTAAGCTCTGACAATTACATATCTGGTGTCAGTTCAACACTCATTTTCCAAAATATACATCTACGGTTGCTCAGAGGAGTTTGAAGAATTTCAGTCAGGTAATGTAAAGCACTTCAGTGCGGAAGCAGTTAACATTTTATTTCTATTGGCACTGATTTGATGACCATGGGATTGGGGGAAGTGAGAGGAGAGCTAATCCTGCATCACCGCTGATGCTGCACCTGGTACCTTCAGGCACAGCACCATGATAGTTGACTAAAGATCCATTTTCTATATATCAGGGTTGTTTAATGGAGCTTTGTCATAAGTAGGACAGATCAGTGATATAGAACAGGCAAAGTGAACTTCCGGAAGTTGAACTAAATTCAATCCATAACTTAAAAAATAAGGCTTTGTTTTCCCTCAAAAAAAAAATTAATAAGGCTTTGTTTTTTTCACCTTTCCGTATTCAAACTTGTCTAAATTTATTAGAATTTTGTCAAACTTGTGTTAACTTATTGGCCCTCGGATTAACTTGATTTAAACTTAAGACTTAATTTAAGTTGTAATATGAAGTTGGTATCGTTTATACAGATTAATCTCGACTTTTCTGATTTTTCCTAAGAATTTTTTTGAAGGTTAAATGAACTAGACCTTATTGTGCTTTGATTAATCATTATGCACTACAATACTGAAGAAAAGTCTTACAAGGATATATAACTGTGAAATAAGCTTTCGAAGCAAATACCTTGTCCTATGGCTTGTCTTAAACTCTTAACGTTGCCTAATATGGAAAGAGCTTGCCAACCAACAATTTTCACATTCAACTTAAAATTTGGAGATATTTCTTCTCATGCGCATCATGCTCCCTCTCATAGAGAAAACTTTTCCTTAAGGTTGAGTTGATTGACTACTAGTTTGATCAATTCAAAAGGTAGATCAAACAAGGACATGTAGTTGGATAAAAAAAGAACGAATAGAATAACTTCCAGAAAGGGGGTTGTCCTCTTACATATAGAAAAGCTCAAACTGCACTAAGGCGATAGAGGTACTGCCCCGCCTCATTGAAGTAAGGCGCACCAAGTATAAAAAAGAAAGCTTTGCAACTCAGTTGCAACTCGTTCACTTCAGGTGCGCCTTTTTGAATGTGCCTCGCTTAGCATAAACCTTACCCTATTTACCTAGCGCCTCAATGCCAGGTTTTTAAAACACCAAAGTGGGGTACATTTTTTTTTAACACCCCCTTACTTTGAGTTGATACTTCCTAATCATTACATATAAGCACTTCCTCTAGCTTAAAGGTGTTTGGCAATCATCCTTATGTTTCTGCAGTAACCTTTTTGAAATCAACATTGTCAATTAAGGAATTCTAGGTTAGAGCTGTGGTCTTGAGGGAAATGGATTTTCGTGGTCGTCTCTCTAGCTTTTACATTTAAAAGCTTAGTTTCAACCGTATCTTCTTGAATCCCATCAATTGGCTTTAAAGGCCTATACTTTGCATTGACGTCTTTTAGGAGAATACATGTACATCAAATGTATAAATGTCTTAAGTTTCCATCACTCAGAGAAGGATAAAAAACATACTAACTGGGAGAAGTTAGTGAAATGGAAGCATGCAGACGTGAATTGGTTTAACAGGTTGGCACCCCAAACTGGGTAGGTAGTTGGTTATTTTGATCTGATTCTTGTACACGTAGGGATGCCTTTCTTATACTTGTAATTATATTAACCAAAAACTATGTTAACCAAAAAAAATAATATTAACTTGAGAAGTAGAGATATCTATATCAAGGCTTAGGTGCCAAATATTAATACGAGGTAAAATAATAATTGAGGAAATTGAGAACTATTGAAGTAGTATAATGGATTGTTTTGGGTGGATATTGAACCAAGGTTATTTAGTATTAGATTCCAATATGAGCTAAACAGTTTGGCAGAGAACCTATGCTACTTAGGGACTATTTGGCTCACCAAATTATAATGCAATGGAATGAGAACCCCATACTTGTTTGGTCTAATGTTGAAATGGATTCTATATCTGGTTCGTGCTGCTTGGTTCAATTTGGAATGTAACAGACATCTCTATTGACAAGAAATGGCAAGCCTTGGGTGAAGATAGAAAGTGACTCACATTTAAATTAAGAAATTAAAAATAGCACCAGTAGGACAATCTCCATCTTATAAGGAGATATGATTGGTTGTGTGAACCAAGATGTCCTTTGAGTTACTTGGATTCTTCTCTACTCACTTTCGTACAATGCAATTTGATTCTTCAGATAATTCTTTTTTTTTATATCTTTTACCTTTTCCATTACAAGTCATCCTTGGTCTGTCTCGACTTCTTTCAATATCATTACCCCACTATCAATTCGGATCATAACATTGGAACAGGTATGAGAACCTTAACTGCTACTTTTTCCCGTTAAACTAGTCCAAAAGTGTGTCATGTACTGATTCATTCGTTCTAGGCTTGTGGTTCACGGGGTATATAACAAAGTAACACTATATCTAAACGACCATCACTTCTCTTTCATCATCTTTTTGTGGATTTGTTCATATTACTGCTCTCTACCTCAACATACATATCTCCGCCTCTCTAGTCCATTCATCCGCTAAAGTCAAACATAATCTTTCTTGAAATCAGAAAAAAACAACTGGCAGAAAAATTAAAATAGAACATCTATCTAAATTTCGTCAGCACAAACCAAGGGGAAAATAAGCTAAGTAATAATTACAATATGATGACAGGGGTCTAGGGTCATGATTTTGCTGACATCAGATGATGACAGATATTGCTCTAATGGTTACCAAAGAGAGAACTACTACTAAGTGGTTGCTGGAGAGAGTAGGAAAGGTCATTTGACCATGAGAGAAAGTATTATTTTTGGAGGGGTTGTTTTAGAGCATGAATTACAGTTTGAATCTCGGGAGTTGGAAGTTAGAAAAGGATGAGGTAGAAAGGATTCATGAGAGTTGGGGGAATTCGCTTCCCCTCAATATATTTTACATTGTCAAAAAGGTCCAACGAAACAACGGAATTTATTCTAAAGTAAATGTCCGACTTTGATGCTATCATAGGATATGTGTACATGCTAAGGTGTCAGACTTTGCCATACATTATGTTTTTGGTCCGAAATTGTTAACCAATAGGCTCACTGAGTAGTACTCAGTTGAAGGGAGGGGGGGGGGGGGGGGGNNNNNNNNNNNGGGGGGGGGGGGGGGAGTGAATTGTAGAAAACGTTAATCCATGCGCAGTCTAGCAGAAAAAAAGTGTACAGATCACAGTCAAAAAGAAAATGACTTGATGGAATTATACATTTCATAGTAGAGAGACAAATTGTAGATCAAATAGGAAGGAAAGGGACGAGGAAGGAAGAATGAAAAAGCAGCAGAAAGTGAAAGAGTGAACACGAGATCATTGAAGAAAGAGAGAAAATTAATTAACTTCAATAGGCCTGACCGGAGATGACAATGGGAAAGACAGTGCCACAACCACCAGGGAGGCAACAACCAGAAATTTCTGGCATAGACAACAACCACCAATTTGCCAATCACTAGCAAACCCTTGAATTAGGTTTTTTTTTGCAATTCAGGTTTTTACTTTTGTGGGGCGTTTAGTACGTGGGAATGGGAAATTGGGGAATTGAGAGTAGGATTGGGATTGAGAATTGTTATTGGGGACTTCGTAGAAATATCGAGAATCCCTTGTTCGGTATGTTGGATGGGATAAGTTGGGAATAAATATTTACAAAAATATCTTTGTTTACTCTCCTCTTCTTCACCTCTCATTAATGGTAATATAGTCATTTTACCCTATTTCCAATTCCCATCCCCAATTCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCTAGGTAATAAAACCAAGGGAATTGAGAACTTTATTTCCCCTTTTCAAACCCACAACATTTCCCGTTCCCACTAAACAAACATGGGAATTGAACCAAGTGTGGATAAAAATTCCCATTCCCAGCAACATTTCCCATTAAACAAACACCCCATTGGGGTTAAATTGAAGTTAAATCATGCAATTTCTGGAGGGCTTCTGCTCAAATTTGCATCTTTACGACTAGGTAAGTTTTAATTCGGCAAAATCTTGATCTCTTTCTTCGTTTTTAAGCCAGATCTCTTTTCTTTATCACATGATAAAAGGTGACCCAAGCGCTGTGTCTTGTGCATTGGGTACGGTGGCCTGAGGCGTACGCGGGCGTTTTCTGGAATGCGCTGCACCAGTTAAGGCCAATGCGTTTTGGCCTGCGCCCACTGGCATGGTGGCGCCCTTTTTAAAACTAAGGGCAAGAGGAGTGATAATATTTTAGTATTTGACTATTATTGATCCACAAGAACATTGGATTGAAATGTAAACCTTCTTACTAATATGAATTTGAAGCTGGTTATCTGATTATGACCAAATCTGTTAGGGCTGAGTGAATAAGAGCCACTTGTTTCATTTTCTGGTTTGACTTCATGATCTCTTAAAGTTCCTGATTGGAGTGTCATGACCAGAGTTACCTGGTTCGTGGTTCACTTCGGTACGGGGTACGGGTTCGGTTTCGCGTGTGGCTGATTTTAGGTTTGCGAGAGGTGTATGGATTTTTTTTGTGTCGTTACATTTTAAAGTACGAAATGTAAAATGCGATAAAAAAAATAGTATTAAAGTTGAAACAGAGTATTCATTGTGGCTAATAACACAATCGTTGGCAAAGTGACATGAAAAGGCAGAAGTCAATTGGCAAACAAAAAAACTTGATAAAATAATGGGACACCACACCCATGACCCATGTGCAATGCAACAATAGTGTAGACAAAAAGTAAAATACAACAAAAAGTACAAAAGAAAGTTAAAAAATAAAAACAAAAAATACAACCCATCATCTTCATTCTTCACCATCGACTTCCAGAGTTCCAGTCTCTCATCCATGGTGTTTAGATCAGCAAGACGAAAGAACAACAAAAACAACAATTGACGATCGTAATCAACACGTATGTCCTTCTCAAACAAAAGCCCCAACATATTTTATCTTCTATCGCCTTCCCAGACCTTCAATCGTTAAAACTAGGATTTTGGTTTGGTTCGCAAAACATCGCGAATTGGATCGCCAGCGAACCGCGAATTGGTACGGGCGAACCTGTTTGAGATTCACGGGGGTTACCCGCGAACCAGGTAACACTGGTCATGACTCATGAGTCACTTAGAGAGTATCTTTCTTTCTAAAACACTAGACCTTTTGTGGATCATTATCCCTTAAACTTTCTTTCATATACATCAATGCTCGGATATGTGATCTTTGGTTTTGGGTGCGTGTTCTTTATGCTTATGTTGTATGCGTTTACCTTTGTGTACATTGCCTCGAGTAACTTTTGTGGAACTTAATGCCGATTGCTGAATGCAGATCTACCTTGAACTAGCAAACAATTATAGTAATGGGAATTTGGCTGATCTAGAGACATTTGTTCAGGTGAACAAGGACAAGTTTGAAGGGGTGAGTTATTTAACTTGTGAATTGGGCTAACTTTTTACTATATTCTTGGTTAGCTGGGAAGTGGGCTAAACTTTACAAACCTCGTTTCTTTTCTTTTCCAGGATAACAATCTTGGGTTGGTGAAGCAGGTTGTTTCATCCATCTATAAGCGAAATATCCAGAGATTGACTCAAACCTACTTGACTTTGTCCCTTCAAGATATAGCCAATACAGTGCAATTGAACAGCCCCAAGGAAGCAGAGATGCATGTGCTTCAAATGGTAAATTGGACATCTTTATCTAGTGCTAGAGCCTTTTTTAATGGTTGAGGACATTTTGGACATCTTTTGGCATGGACATCATAACTTTTCGTAGGCGTTTTATACATTACTTTTTTTGGGTTTGTCAACGAGAATTTTCTTGCTATATTCAAATATTAGTATTATATCTTAATTACTTTTTCTTATTATCAGATTCAAGATGGTCATATCTATGCTACAATCAACCAGAGAGATGGAATGGTTCAATTCCTTGAGGACCCAGAACAGTATAAGTCGTGTGAGATGATTGAACATATAGACTGCTCCATTCAGAGGTATATTCCTCAAACTAAAACATATTACATGGTCACAGTTGTTTGAGGTGGTAGTGTTCAAATTATTCCCAATCATATTAAATGTTACTGCCTCTGTAGTTTTGTTTGTTGTAAAATTCCCTCTATAGCTTAGGTGTCTGAAACTTTCACACAATCAAATGATCAAGCAGTTGCTGAAAATGCTAAAAGTTGAATAAAGGTATCATGCTGGCTCTGCAAGGTTCCGGTGTCTATTGGTTTATGTTGAGATTTTCTGTTTTTTCTCGGTCTATCTTTTGAGGTTACTGTTGTAAACGTACATCCCTGTGTCTGTTGGTAACTGTTATTTAGCTCATGGAATGCTTGTCTGTAACACATCTCTGAAAATTCTTCTGAAGGATAATGGTTCTATCAAAGAAACTAGCTTCTGTAGATGAACAGATATCGTGTGAACCACTGTACCTGACAAAGGTAAGGCAGCTATCTTATTGAATAGTTTTGTCTAACCTTAGCCCTTTACTCCAACTAAATGATATGAATGATTGGCCTTGTACACTACAGGTTGGGAAAGAACGGCAACGCTTTGACTTTGATGATTTTGACAGTGTGCCCCAAAAATTTAACATTTGAGTCAAGAATGCTCCAGTCTTGGTGCATTGCTCACAGTTGTTTTGTCTGTTTATATAGTTCAGAGAACAGATCAACTGTTTAGGTAGGAACTTTTGGATCATCTTCCAATATTCAAATATGATTAACGTTTTTGCTCAAGTGTCATCCGCCTTTGCTTCCGTACAGTCCATTACAGGATAATGAGAATGTTGTTGGTGTTACATTTAAATGTTCAACGCTACAATATGTGGCCATTGATGTACTTGTGAGTTTCTTATGGTTATCTTATGGTCCTTTGACAATCAGTTTGATTCTACAGAATGATTCTCGTGAATAGGATACCCCAATAGCAATAATATTGACCTTGGATCCCTCTACACCTAGCCAGTGGCGGATCTACCTTGTGTCATGGTGGGTCAAGTGACCCACCATTATTCTACGATGTACTTGCAGAGTAGCAGTAGCATTAAATAAAAATAAAGGAACAGTAAAAACATAAATAAAAGAAAAAAGTCGGAGTAGTTTGCTGGCACCTGTTAGAGTGGTAGCCACACAAAATTCCAACTTTATGATATTTTTCATTCATCCTTTAATTTTGTCTTTGTTTTTGTTTTCTTCTAATTTTTTTTTACTATATCTTGATAGTTTGTATGATCTCATGTGCTA

mRNA sequence

TCATATGTCCATGTGTATTGTCCACGTAAGCTGGGTAAACTACCCGGTGGGTAGATGTAGCTTTCTCCCAAATAAAACCCCTCAAAATCTCAAATTGTCAATATCGATAAAAGCCCCTCAAAACACACTCTCTCTCTCCTCTTGATACTCGCAATACCCCACCTTTTCCCGAAGACACTGCGGCCATGGATACGGTGGAGAAGCTGGTGGCGCAAATCCAAGGGCTTTCTGGTAGCGTCGGAGATTTGAATCAACTCCACCATATCCTCAAACAATCCGAAGACTCCCTTCGTCTCAATTCTTCTCGCTTGGCCCCTTTCCTCCATCAGCTCGACCCTTCCGTTCACTCTCTCGGATATCTTTACTTCCTGGATGCTTACACATATTCAGTATCAAGAGATGGAGCTAATGAGGTGGCTCTTTTATTGGCCAGATTTATTAGTTCTTGCCTGGCTGAACAGATCCGACTTGCACATCATAAATTTATAAGTGTCTGCAGGAGGTTTAAGGACCAAGCTATAGTGCTTTCAGAGCCCATGAGAGCTGTTGCCCCAATGCTGATAGCCATCCGTAAAATTCGGCCTTCTTCCGAACACCTTACAACTCTGCATCCTGACTTTCTCCTTCTCTGTATTTTGGCAAAATGCTATAAGACCGGTCTATCTGTGTTAGAGGATGATGTCTTTGAGGTTGATCAGCCGAAGGACCTTTTTCTTTACTGTTACTATGGGGGAATGATTTGTATCGGACTAAAGCAATTCAAGAAAGCATCAGAGTTTTTCCACAACGTGGTTACTGCTCCTATGTCTACATTAAATGCAATAGCTGTTGAAGCATACAAAAAGTACATATTGGTTTCACTAATTCACCGTGGGAAGTTCAACACTCATTTTCCAAAATATACATCTACGGTTGCTCAGAGGAGTTTGAAGAATTTCAGTCAGATCTACCTTGAACTAGCAAACAATTATAGTAATGGGAATTTGGCTGATCTAGAGACATTTGTTCAGGTGAACAAGGACAAGTTTGAAGGGGATAACAATCTTGGGTTGGTGAAGCAGGTTGTTTCATCCATCTATAAGCGAAATATCCAGAGATTGACTCAAACCTACTTGACTTTGTCCCTTCAAGATATAGCCAATACAGTGCAATTGAACAGCCCCAAGGAAGCAGAGATGCATGTGCTTCAAATGATTCAAGATGGTCATATCTATGCTACAATCAACCAGAGAGATGGAATGGTTCAATTCCTTGAGGACCCAGAACAGTATAAGTCGTGTGAGATGATTGAACATATAGACTGCTCCATTCAGAGGATAATGGTTCTATCAAAGAAACTAGCTTCTGTAGATGAACAGATATCGTGTGAACCACTGTACCTGACAAAGGTTGGGAAAGAACGGCAACGCTTTGACTTTGATGATTTTGACAGTGTGCCCCAAAAATTTAACATTTGAGTCAAGAATGCTCCAGTCTTGGTGCATTGCTCACAGTTGTTTTGTCTGTTTATATAGTTCAGAGAACAGATCAACTGTTTAGGTAGGAACTTTTGGATCATCTTCCAATATTCAAATATGATTAACGTTTTTGCTCAAGTGTCATCCGCCTTTGCTTCCGTACAGTCCATTACAGGATAATGAGAATGTTGTTGGTGTTACATTTAAATGTTCAACGCTACAATATGTGGCCATTGATGTACTTGTGAGTTTCTTATGGTTATCTTATGGTCCTTTGACAATCAGTTTGATTCTACAGAATGATTCTCGTGAATAGGATACCCCAATAGCAATAATATTGACCTTGGATCCCTCTACACCTAGCCAGTGGCGGATCTACCTTGTGTCATGGTGGGTCAAGTGACCCACCATTATTCTACGATGTACTTGCAGAGTAGCAGTAGCATTAAATAAAAATAAAGGAACAGTAAAAACATAAATAAAAGAAAAAAGTCGGAGTAGTTTGCTGGCACCTGTTAGAGTGGTAGCCACACAAAATTCCAACTTTATGATATTTTTCATTCATCCTTTAATTTTGTCTTTGTTTTTGTTTTCTTCTAATTTTTTTTTACTATATCTTGATAGTTTGTATGATCTCATGTGCTA

Coding sequence (CDS)

ATGGATACGGTGGAGAAGCTGGTGGCGCAAATCCAAGGGCTTTCTGGTAGCGTCGGAGATTTGAATCAACTCCACCATATCCTCAAACAATCCGAAGACTCCCTTCGTCTCAATTCTTCTCGCTTGGCCCCTTTCCTCCATCAGCTCGACCCTTCCGTTCACTCTCTCGGATATCTTTACTTCCTGGATGCTTACACATATTCAGTATCAAGAGATGGAGCTAATGAGGTGGCTCTTTTATTGGCCAGATTTATTAGTTCTTGCCTGGCTGAACAGATCCGACTTGCACATCATAAATTTATAAGTGTCTGCAGGAGGTTTAAGGACCAAGCTATAGTGCTTTCAGAGCCCATGAGAGCTGTTGCCCCAATGCTGATAGCCATCCGTAAAATTCGGCCTTCTTCCGAACACCTTACAACTCTGCATCCTGACTTTCTCCTTCTCTGTATTTTGGCAAAATGCTATAAGACCGGTCTATCTGTGTTAGAGGATGATGTCTTTGAGGTTGATCAGCCGAAGGACCTTTTTCTTTACTGTTACTATGGGGGAATGATTTGTATCGGACTAAAGCAATTCAAGAAAGCATCAGAGTTTTTCCACAACGTGGTTACTGCTCCTATGTCTACATTAAATGCAATAGCTGTTGAAGCATACAAAAAGTACATATTGGTTTCACTAATTCACCGTGGGAAGTTCAACACTCATTTTCCAAAATATACATCTACGGTTGCTCAGAGGAGTTTGAAGAATTTCAGTCAGATCTACCTTGAACTAGCAAACAATTATAGTAATGGGAATTTGGCTGATCTAGAGACATTTGTTCAGGTGAACAAGGACAAGTTTGAAGGGGATAACAATCTTGGGTTGGTGAAGCAGGTTGTTTCATCCATCTATAAGCGAAATATCCAGAGATTGACTCAAACCTACTTGACTTTGTCCCTTCAAGATATAGCCAATACAGTGCAATTGAACAGCCCCAAGGAAGCAGAGATGCATGTGCTTCAAATGATTCAAGATGGTCATATCTATGCTACAATCAACCAGAGAGATGGAATGGTTCAATTCCTTGAGGACCCAGAACAGTATAAGTCGTGTGAGATGATTGAACATATAGACTGCTCCATTCAGAGGATAATGGTTCTATCAAAGAAACTAGCTTCTGTAGATGAACAGATATCGTGTGAACCACTGTACCTGACAAAGGTTGGGAAAGAACGGCAACGCTTTGACTTTGATGATTTTGACAGTGTGCCCCAAAAATTTAACATTTGA

Protein sequence

MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLYFLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRAVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCYYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPEQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQKFNI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22988.1	Spo22988.1	mRNA

Homology

[Close]

BLAST of Spo22988.1 vs. NCBI nr
Match: gi|902182902|gb|KNA10008.1| (hypothetical protein SOVF_148270 [Spinacia oleracea])

HSP 1 Score: 837.0 bits (2161), Expect = 1.400e-239
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY
Sbjct: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60

Query: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120
           FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA
Sbjct: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120

Query: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180
           VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY
Sbjct: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180

Query: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240
           YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT
Sbjct: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240

Query: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300
           STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR
Sbjct: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300

Query: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360
           NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE
Sbjct: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360

Query: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 420
           QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK
Sbjct: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 420

Query: 421 FNI 424
           FNI
Sbjct: 421 FNI 423

[Close]

BLAST of Spo22988.1 vs. NCBI nr
Match: gi|731374551|ref|XP_010666992.1| (PREDICTED: COP9 signalosome complex subunit 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 709.9 bits (1831), Expect = 2.600e-201
Identity = 361/424 (85.14%), Postives = 383/424 (90.33%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MD VE++VAQIQGLSGS  DLN LH +LKQSEDSLR N SRL  FL QLD S HSLGYLY
Sbjct: 1   MDAVERVVAQIQGLSGSAADLNNLHVLLKQSEDSLRANFSRLPSFLLQLDTSAHSLGYLY 60

Query: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120
           FLDAYT SVSRD  NE  LL+ARFISSCLAEQIRLAHHKFI VC+RFKDQ IVLS PMR 
Sbjct: 61  FLDAYTASVSRDQTNEAVLLVARFISSCLAEQIRLAHHKFICVCKRFKDQLIVLSAPMRG 120

Query: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180
           VAPML AI KIRPSSEHLTTLHPDFL LC+LAKCYKTGLSVLEDDVFEVDQPKDLFLYCY
Sbjct: 121 VAPMLTAIHKIRPSSEHLTTLHPDFLSLCVLAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180

Query: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240
           YG +I IGLK+F+KA E  HNVVTAPMSTLNAIAVEAYKKYILVSLIH G+F+THFPKYT
Sbjct: 181 YGALIYIGLKKFEKALELLHNVVTAPMSTLNAIAVEAYKKYILVSLIHHGQFSTHFPKYT 240

Query: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300
           S+V QRSLKNF+Q YLELAN YSNG + +LETF+QVNKDKFE DNNLGLVKQVVSSIYKR
Sbjct: 241 SSVCQRSLKNFTQTYLELANCYSNGKIVELETFLQVNKDKFEVDNNLGLVKQVVSSIYKR 300

Query: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360
           NIQRLTQTYLTLSLQDIA TVQLNSPKEAEM+VLQMIQDGHIYATINQ+DGMV+FLEDPE
Sbjct: 301 NIQRLTQTYLTLSLQDIATTVQLNSPKEAEMYVLQMIQDGHIYATINQKDGMVRFLEDPE 360

Query: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFD-SVPQ 420
           QYK+CEMIEHIDCSIQRIM LSKKLASVDE ISC+PLYLTKVGKERQRFDFDD+D SVPQ
Sbjct: 361 QYKTCEMIEHIDCSIQRIMSLSKKLASVDELISCDPLYLTKVGKERQRFDFDDYDSSVPQ 420

Query: 421 KFNI 424
           KF I
Sbjct: 421 KFTI 424

[Close]

BLAST of Spo22988.1 vs. NCBI nr
Match: gi|255536979|ref|XP_002509556.1| (PREDICTED: COP9 signalosome complex subunit 3 [Ricinus communis])

HSP 1 Score: 634.8 bits (1636), Expect = 1.100e-178
Identity = 312/423 (73.76%), Postives = 370/423 (87.47%), Query Frame = 1


		  
Query: 3   TVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNS-SRLAPFLHQLDPSVHSLGYLYF 62
           ++E LV QIQGLS S  D++ LH+ LKQ++DSL  +S +RL PFL QLDPSVHSLGYLYF
Sbjct: 5   SIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGYLYF 64

Query: 63  LDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 122
           L+A T   +S++ A  + L+LARF++SC A+QIRLA  KFISVC+RFKDQ ++L EPMR 
Sbjct: 65  LEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMRG 124

Query: 123 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 182
           VAP+L A+RK++ SS HLTTLHP+FL LC+L+KCYKTGLS+LEDD+FEVDQP+DLFLY Y
Sbjct: 125 VAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYSY 184

Query: 183 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 242
           YGGM+CIG K+F+KA E  HNVVTAPMS++NAIAVEAYKKYIL SLIH+G+F+T  PKY 
Sbjct: 185 YGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLPKYA 244

Query: 243 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 302
           S+ AQR+LKNF Q Y+ELAN+YS G +A+LET+VQ N++KFE DNNLGLVKQVVSS+YKR
Sbjct: 245 SSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSMYKR 304

Query: 303 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 362
           NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG IYATINQ+DGMV+FLEDPE
Sbjct: 305 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPE 364

Query: 363 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 422
           QYK+CEMIEHID SIQRIM LSKKL ++DE +SC+PLYL K G+ERQRFDFDDFD+VPQK
Sbjct: 365 QYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTVPQK 424

Query: 423 FNI 424
           FNI
Sbjct: 425 FNI 427

[Close]

BLAST of Spo22988.1 vs. NCBI nr
Match: gi|823253280|ref|XP_012459259.1| (PREDICTED: COP9 signalosome complex subunit 3 [Gossypium raimondii])

HSP 1 Score: 630.6 bits (1625), Expect = 2.000e-177
Identity = 312/424 (73.58%), Postives = 365/424 (86.08%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           M++VE L+ QIQGLS +  D+  L ++LKQ+++SL   S+RL PFL QLDPS HSLGYLY
Sbjct: 1   MNSVEGLLTQIQGLSSTASDVLSLQNVLKQADESLHAESTRLLPFLDQLDPSKHSLGYLY 60

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
           FL+A T   V+ + A+   L++ARFISSC+AEQIRLA  KFISVC+RFKDQ ++L EP+R
Sbjct: 61  FLEACTAGPVTTESASSFVLVIARFISSCVAEQIRLAPDKFISVCKRFKDQVLLLEEPLR 120

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            VAPML A+RK++ S+EHLTTLHP+FLLLC+LAKCYKTGLS+LE+D+FEVDQP+DL+LYC
Sbjct: 121 GVAPMLTAVRKLQSSTEHLTTLHPEFLLLCLLAKCYKTGLSILEEDIFEVDQPRDLYLYC 180

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIG K F+KA E  HNVVTAPMST+NAIAVEAYKKYILVSLIH G+ +T  PKY
Sbjct: 181 YYGGMICIGQKCFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHHGQLSTSLPKY 240

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
            S VAQR+LK+    Y+ELAN+Y+NG +ADLET+VQ N +KF  DNNLGLVKQVVSSIYK
Sbjct: 241 ASGVAQRNLKSLCLSYIELANSYNNGKIADLETYVQANMEKFGSDNNLGLVKQVVSSIYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG IYATINQ+DGMV+FLEDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 360

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQ 420
           E YK+CEMIEHID SIQR+M LSKKL  +DE ISC+PLYL K G+ERQRFDFDDFDSVPQ
Sbjct: 361 ELYKTCEMIEHIDLSIQRLMTLSKKLTVMDELISCDPLYLGKAGRERQRFDFDDFDSVPQ 420

Query: 421 KFNI 424
           +FNI
Sbjct: 421 RFNI 424

[Close]

BLAST of Spo22988.1 vs. NCBI nr
Match: gi|225452159|ref|XP_002263731.1| (PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera])

HSP 1 Score: 630.6 bits (1625), Expect = 2.000e-177
Identity = 308/424 (72.64%), Postives = 367/424 (86.56%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MD+VE +V QIQGLSG  GD++ LH +LKQ++D L   S+RLAPFL QLDPS+H+LGYLY
Sbjct: 1   MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLY 60

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
            L+A T + + ++ AN++ L +A FI++C AEQI LA  KF+S+C+R KDQ I+L  PMR
Sbjct: 61  LLEACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMR 120

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            VAPML A+RK++ +SE LT LHPDFLLLC+LAKCYKTGL +LEDD+FEVDQP+D FLYC
Sbjct: 121 GVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFLYC 180

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIG K+F+KA E  HNVVTAPMST+NAIAVEAYKKYILVSLIH G+F+T FPKY
Sbjct: 181 YYGGMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKY 240

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
           TS+VAQR+LKNFSQ YL+LAN+YS+G +++ E  +Q N++KFE D NLGLVKQVVSS+YK
Sbjct: 241 TSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG I+ATINQ+DGMV+F EDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDP 360

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQ 420
           EQYK+CEMIEHID SIQRIM LSKKL ++DE ISC+PLYL K G+ERQRFDFDD+D+VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQ 420

Query: 421 KFNI 424
           KFNI
Sbjct: 421 KFNI 424

[Close]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTI6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148270 PE=4 SV=1)

HSP 1 Score: 837.0 bits (2161), Expect = 1.000e-239
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY
Sbjct: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60

Query: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120
           FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA
Sbjct: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120

Query: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180
           VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY
Sbjct: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180

Query: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240
           YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT
Sbjct: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240

Query: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300
           STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR
Sbjct: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300

Query: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360
           NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE
Sbjct: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360

Query: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 420
           QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK
Sbjct: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 420

Query: 421 FNI 424
           FNI
Sbjct: 421 FNI 423

[Close]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B3H1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_005920 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 1.800e-201
Identity = 361/424 (85.14%), Postives = 383/424 (90.33%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MD VE++VAQIQGLSGS  DLN LH +LKQSEDSLR N SRL  FL QLD S HSLGYLY
Sbjct: 1   MDAVERVVAQIQGLSGSAADLNNLHVLLKQSEDSLRANFSRLPSFLLQLDTSAHSLGYLY 60

Query: 61  FLDAYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 120
           FLDAYT SVSRD  NE  LL+ARFISSCLAEQIRLAHHKFI VC+RFKDQ IVLS PMR 
Sbjct: 61  FLDAYTASVSRDQTNEAVLLVARFISSCLAEQIRLAHHKFICVCKRFKDQLIVLSAPMRG 120

Query: 121 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180
           VAPML AI KIRPSSEHLTTLHPDFL LC+LAKCYKTGLSVLEDDVFEVDQPKDLFLYCY
Sbjct: 121 VAPMLTAIHKIRPSSEHLTTLHPDFLSLCVLAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 180

Query: 181 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 240
           YG +I IGLK+F+KA E  HNVVTAPMSTLNAIAVEAYKKYILVSLIH G+F+THFPKYT
Sbjct: 181 YGALIYIGLKKFEKALELLHNVVTAPMSTLNAIAVEAYKKYILVSLIHHGQFSTHFPKYT 240

Query: 241 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 300
           S+V QRSLKNF+Q YLELAN YSNG + +LETF+QVNKDKFE DNNLGLVKQVVSSIYKR
Sbjct: 241 SSVCQRSLKNFTQTYLELANCYSNGKIVELETFLQVNKDKFEVDNNLGLVKQVVSSIYKR 300

Query: 301 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 360
           NIQRLTQTYLTLSLQDIA TVQLNSPKEAEM+VLQMIQDGHIYATINQ+DGMV+FLEDPE
Sbjct: 301 NIQRLTQTYLTLSLQDIATTVQLNSPKEAEMYVLQMIQDGHIYATINQKDGMVRFLEDPE 360

Query: 361 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFD-SVPQ 420
           QYK+CEMIEHIDCSIQRIM LSKKLASVDE ISC+PLYLTKVGKERQRFDFDD+D SVPQ
Sbjct: 361 QYKTCEMIEHIDCSIQRIMSLSKKLASVDELISCDPLYLTKVGKERQRFDFDDYDSSVPQ 420

Query: 421 KFNI 424
           KF I
Sbjct: 421 KFTI 424

[Close]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Match: B9RBM2_RICCO (26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_1678560 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 7.500e-179
Identity = 312/423 (73.76%), Postives = 370/423 (87.47%), Query Frame = 1


		  
Query: 3   TVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNS-SRLAPFLHQLDPSVHSLGYLYF 62
           ++E LV QIQGLS S  D++ LH+ LKQ++DSL  +S +RL PFL QLDPSVHSLGYLYF
Sbjct: 5   SIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGYLYF 64

Query: 63  LDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRA 122
           L+A T   +S++ A  + L+LARF++SC A+QIRLA  KFISVC+RFKDQ ++L EPMR 
Sbjct: 65  LEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMRG 124

Query: 123 VAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYCY 182
           VAP+L A+RK++ SS HLTTLHP+FL LC+L+KCYKTGLS+LEDD+FEVDQP+DLFLY Y
Sbjct: 125 VAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYSY 184

Query: 183 YGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKYT 242
           YGGM+CIG K+F+KA E  HNVVTAPMS++NAIAVEAYKKYIL SLIH+G+F+T  PKY 
Sbjct: 185 YGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLPKYA 244

Query: 243 STVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYKR 302
           S+ AQR+LKNF Q Y+ELAN+YS G +A+LET+VQ N++KFE DNNLGLVKQVVSS+YKR
Sbjct: 245 SSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSMYKR 304

Query: 303 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDPE 362
           NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG IYATINQ+DGMV+FLEDPE
Sbjct: 305 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPE 364

Query: 363 QYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQK 422
           QYK+CEMIEHID SIQRIM LSKKL ++DE +SC+PLYL K G+ERQRFDFDDFD+VPQK
Sbjct: 365 QYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTVPQK 424

Query: 423 FNI 424
           FNI
Sbjct: 425 FNI 427

[Close]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S050_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G088900 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.400e-177
Identity = 312/424 (73.58%), Postives = 365/424 (86.08%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           M++VE L+ QIQGLS +  D+  L ++LKQ+++SL   S+RL PFL QLDPS HSLGYLY
Sbjct: 1   MNSVEGLLTQIQGLSSTASDVLSLQNVLKQADESLHAESTRLLPFLDQLDPSKHSLGYLY 60

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
           FL+A T   V+ + A+   L++ARFISSC+AEQIRLA  KFISVC+RFKDQ ++L EP+R
Sbjct: 61  FLEACTAGPVTTESASSFVLVIARFISSCVAEQIRLAPDKFISVCKRFKDQVLLLEEPLR 120

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            VAPML A+RK++ S+EHLTTLHP+FLLLC+LAKCYKTGLS+LE+D+FEVDQP+DL+LYC
Sbjct: 121 GVAPMLTAVRKLQSSTEHLTTLHPEFLLLCLLAKCYKTGLSILEEDIFEVDQPRDLYLYC 180

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIG K F+KA E  HNVVTAPMST+NAIAVEAYKKYILVSLIH G+ +T  PKY
Sbjct: 181 YYGGMICIGQKCFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHHGQLSTSLPKY 240

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
            S VAQR+LK+    Y+ELAN+Y+NG +ADLET+VQ N +KF  DNNLGLVKQVVSSIYK
Sbjct: 241 ASGVAQRNLKSLCLSYIELANSYNNGKIADLETYVQANMEKFGSDNNLGLVKQVVSSIYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG IYATINQ+DGMV+FLEDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 360

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQ 420
           E YK+CEMIEHID SIQR+M LSKKL  +DE ISC+PLYL K G+ERQRFDFDDFDSVPQ
Sbjct: 361 ELYKTCEMIEHIDLSIQRLMTLSKKLTVMDELISCDPLYLGKAGRERQRFDFDDFDSVPQ 420

Query: 421 KFNI 424
           +FNI
Sbjct: 421 RFNI 424

[Close]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Match: D7UBF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00270 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.400e-177
Identity = 308/424 (72.64%), Postives = 367/424 (86.56%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           MD+VE +V QIQGLSG  GD++ LH +LKQ++D L   S+RLAPFL QLDPS+H+LGYLY
Sbjct: 1   MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLY 60

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
            L+A T + + ++ AN++ L +A FI++C AEQI LA  KF+S+C+R KDQ I+L  PMR
Sbjct: 61  LLEACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMR 120

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            VAPML A+RK++ +SE LT LHPDFLLLC+LAKCYKTGL +LEDD+FEVDQP+D FLYC
Sbjct: 121 GVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFLYC 180

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIG K+F+KA E  HNVVTAPMST+NAIAVEAYKKYILVSLIH G+F+T FPKY
Sbjct: 181 YYGGMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKY 240

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
           TS+VAQR+LKNFSQ YL+LAN+YS+G +++ E  +Q N++KFE D NLGLVKQVVSS+YK
Sbjct: 241 TSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYK 300

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDG I+ATINQ+DGMV+F EDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDP 360

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDFDDFDSVPQ 420
           EQYK+CEMIEHID SIQRIM LSKKL ++DE ISC+PLYL K G+ERQRFDFDD+D+VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQ 420

Query: 421 KFNI 424
           KFNI
Sbjct: 421 KFNI 424

[Close]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Match: CSN3_ARATH (COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2)

HSP 1 Score: 501.5 bits (1290), Expect = 8.900e-141
Identity = 258/425 (60.71%), Postives = 322/425 (75.76%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           +++VE ++  IQGLSGS  DL+ LH +L+ ++DSLR         L QLD S HSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
           FL+  T   VS++ A     ++ARFI+SC A QIRLA +KF+S+C+  KD  I L +P+R
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            V P+L A++K++ SS+ LT LHPD L LC+ AK YK+G S+L DD+ E+DQP+D FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIGLK+F+KA E  +NVVTAPM  +NAIA+EAYKKYILVSLIH G+F    PK 
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
            ST AQRS KN++  Y+EL N Y++G + +LE  V     +FE D NLGLVKQ VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNI RLTQ YLTLSLQDIAN VQL + KEAEMHVLQMIQDG I+A INQ+DGMV+FLEDP
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDP 364

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDF-DDFDSVP 420
           EQYKS EMIE +D  IQR + LSK L ++DE +SC+PLYL KVG+ERQR+DF DDFD+VP
Sbjct: 365 EQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDFDTVP 424

Query: 421 QKFNI 424
           QKF++
Sbjct: 425 QKFSM 429

[Close]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Match: CSN3_DANRE (COP9 signalosome complex subunit 3 OS=Danio rerio GN=cops3 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.600e-76
Identity = 165/404 (40.84%), Postives = 240/404 (59.41%), Query Frame = 1


		  
Query: 4   VEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLYFLD 63
           +E+ V  ++ LS   G + QL  ++ +S + L  N S L   L  LD   HSLG L  L 
Sbjct: 5   LEQFVNNVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDIQEHSLGVLAVLF 64

Query: 64  AYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRAVAP 123
                 +      +   +  FIS+C  E IR A   F  +C +  +  +   +P+R ++ 
Sbjct: 65  VKFSMPNIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGISI 124

Query: 124 MLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQP------KDLFL 183
           +  AI K++ ++  LT++H D   LC+LAKC+K  +  LE D+ ++ +       K    
Sbjct: 125 LKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPAVPFLELDMMDICKENGAYDAKHFLC 184

Query: 184 YCYYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFP 243
           Y YYGGMI  GLK F++A  FF   +T P   ++ I +EAYKKYILVSLI  GK     P
Sbjct: 185 YYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQ-QLP 244

Query: 244 KYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSI 303
           KYTS +  R +K  S  Y ELA  Y+  N A+L   V  + + F  DNN GLVKQ +SS+
Sbjct: 245 KYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVNKHSETFTRDNNTGLVKQCLSSL 304

Query: 304 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLE 363
           YK+NIQRLT+T+LTLSLQD+A+ VQL+ P+EAE +VL MI+DG IYA+INQ+DGMV F +
Sbjct: 305 YKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIYASINQKDGMVCFHD 364

Query: 364 DPEQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTK 402
           +PE+Y +  M+  ID  + + + L +KL S+D++I+  P ++ K
Sbjct: 365 NPEKYNNPAMLHKIDQEMLKCIELDEKLKSMDQEITVNPQFVQK 406

[Close]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Match: CSN3_PONAB (COP9 signalosome complex subunit 3 OS=Pongo abelii GN=COPS3 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.000e-75
Identity = 161/404 (39.85%), Postives = 241/404 (59.65%), Query Frame = 1


		  
Query: 4   VEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLYFLD 63
           +E+ V  ++ LS   G + QL  ++ +S + L  N S L   L  LD   HSLG L  L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRAVAP 123
                 S      +   +  FIS+C  E IR A   F  +C +  +  +   +P+R +  
Sbjct: 65  VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGI 124

Query: 124 MLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQP------KDLFL 183
           +  AI K++ ++  LT++H D   LC+LAKC+K  L  L+ D+ ++ +       K    
Sbjct: 125 LKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLC 184

Query: 184 YCYYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFP 243
           Y YYGGMI  GLK F++A  F+   +T P   ++ I +E+YKKYILVSLI  GK     P
Sbjct: 185 YYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QLP 244

Query: 244 KYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSI 303
           KYTS +  R +K  S  Y ELA  YS  N ++L   V  + + F  DNN+GLVKQ +SS+
Sbjct: 245 KYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSL 304

Query: 304 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLE 363
           YK+NIQRLT+T+LTLSLQD+A+ VQL+ P+EAE +VL MI+DG I+A+INQ+DGMV F +
Sbjct: 305 YKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHD 364

Query: 364 DPEQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTK 402
           +PE+Y +  M+ +ID  + + + L ++L ++D++I+  P ++ K
Sbjct: 365 NPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 406

[Close]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Match: CSN3_HUMAN (COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3)

HSP 1 Score: 285.4 bits (729), Expect = 1.000e-75
Identity = 161/404 (39.85%), Postives = 241/404 (59.65%), Query Frame = 1


		  
Query: 4   VEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLYFLD 63
           +E+ V  ++ LS   G + QL  ++ +S + L  N S L   L  LD   HSLG L  L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRAVAP 123
                 S      +   +  FIS+C  E IR A   F  +C +  +  +   +P+R +  
Sbjct: 65  VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGI 124

Query: 124 MLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQP------KDLFL 183
           +  AI K++ ++  LT++H D   LC+LAKC+K  L  L+ D+ ++ +       K    
Sbjct: 125 LKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLC 184

Query: 184 YCYYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFP 243
           Y YYGGMI  GLK F++A  F+   +T P   ++ I +E+YKKYILVSLI  GK     P
Sbjct: 185 YYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QLP 244

Query: 244 KYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSI 303
           KYTS +  R +K  S  Y ELA  YS  N ++L   V  + + F  DNN+GLVKQ +SS+
Sbjct: 245 KYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSL 304

Query: 304 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLE 363
           YK+NIQRLT+T+LTLSLQD+A+ VQL+ P+EAE +VL MI+DG I+A+INQ+DGMV F +
Sbjct: 305 YKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHD 364

Query: 364 DPEQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTK 402
           +PE+Y +  M+ +ID  + + + L ++L ++D++I+  P ++ K
Sbjct: 365 NPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 406

[Close]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Match: CSN3_MACFA (COP9 signalosome complex subunit 3 OS=Macaca fascicularis GN=COPS3 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.000e-75
Identity = 161/404 (39.85%), Postives = 241/404 (59.65%), Query Frame = 1


		  
Query: 4   VEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLYFLD 63
           +E+ V  ++ LS   G + QL  ++ +S + L  N S L   L  LD   HSLG L  L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTYSVSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMRAVAP 123
                 S      +   +  FIS+C  E IR A   F  +C +  +  +   +P+R +  
Sbjct: 65  VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGI 124

Query: 124 MLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQP------KDLFL 183
           +  AI K++ ++  LT++H D   LC+LAKC+K  L  L+ D+ ++ +       K    
Sbjct: 125 LKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLC 184

Query: 184 YCYYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFP 243
           Y YYGGMI  GLK F++A  F+   +T P   ++ I +E+YKKYILVSLI  GK     P
Sbjct: 185 YYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQ-QLP 244

Query: 244 KYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSI 303
           KYTS +  R +K  S  Y ELA  YS  N ++L   V  + + F  DNN+GLVKQ +SS+
Sbjct: 245 KYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSL 304

Query: 304 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLE 363
           YK+NIQRLT+T+LTLSLQD+A+ VQL+ P+EAE +VL MI+DG I+A+INQ+DGMV F +
Sbjct: 305 YKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHD 364

Query: 364 DPEQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTK 402
           +PE+Y +  M+ +ID  + + + L ++L ++D++I+  P ++ K
Sbjct: 365 NPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 406

[Close]

BLAST of Spo22988.1 vs. TAIR (Arabidopsis)
Match: AT5G14250.1 (Proteasome component (PCI) domain protein)

HSP 1 Score: 501.5 bits (1290), Expect = 5.000e-142
Identity = 258/425 (60.71%), Postives = 322/425 (75.76%), Query Frame = 1


		  
Query: 1   MDTVEKLVAQIQGLSGSVGDLNQLHHILKQSEDSLRLNSSRLAPFLHQLDPSVHSLGYLY 60
           +++VE ++  IQGLSGS  DL+ LH +L+ ++DSLR         L QLD S HSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  FLDAYTYS-VSRDGANEVALLLARFISSCLAEQIRLAHHKFISVCRRFKDQAIVLSEPMR 120
           FL+  T   VS++ A     ++ARFI+SC A QIRLA +KF+S+C+  KD  I L +P+R
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 121 AVAPMLIAIRKIRPSSEHLTTLHPDFLLLCILAKCYKTGLSVLEDDVFEVDQPKDLFLYC 180
            V P+L A++K++ SS+ LT LHPD L LC+ AK YK+G S+L DD+ E+DQP+D FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 181 YYGGMICIGLKQFKKASEFFHNVVTAPMSTLNAIAVEAYKKYILVSLIHRGKFNTHFPKY 240
           YYGGMICIGLK+F+KA E  +NVVTAPM  +NAIA+EAYKKYILVSLIH G+F    PK 
Sbjct: 185 YYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKC 244

Query: 241 TSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDNNLGLVKQVVSSIYK 300
            ST AQRS KN++  Y+EL N Y++G + +LE  V     +FE D NLGLVKQ VSS+YK
Sbjct: 245 ASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVKQAVSSLYK 304

Query: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGHIYATINQRDGMVQFLEDP 360
           RNI RLTQ YLTLSLQDIAN VQL + KEAEMHVLQMIQDG I+A INQ+DGMV+FLEDP
Sbjct: 305 RNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDGMVRFLEDP 364

Query: 361 EQYKSCEMIEHIDCSIQRIMVLSKKLASVDEQISCEPLYLTKVGKERQRFDF-DDFDSVP 420
           EQYKS EMIE +D  IQR + LSK L ++DE +SC+PLYL KVG+ERQR+DF DDFD+VP
Sbjct: 365 EQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDFGDDFDTVP 424

Query: 421 QKFNI 424
           QKF++
Sbjct: 425 QKFSM 429

[Close]

BLAST of Spo22988.1 vs. TAIR (Arabidopsis)
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 53.1 bits (126), Expect = 4.700e-7
Identity = 52/204 (25.49%), Postives = 92/204 (45.10%), Query Frame = 1


		  
Query: 167 FEVDQPKDLFLYCYYGGMICIGLKQFKKASEFFHNVVT-APMSTLNAIAVEAYKKYILVS 226
           FE    +    Y +Y G I     ++  A E        AP++ L    ++  K  ILV 
Sbjct: 231 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALG-FRIQCNKWAILVR 290

Query: 227 LIHRGKFNTHFPKYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKDKFEGDN 286
           L+         P+  S   Q+ ++   + Y EL N    G+L    T  +   D F  D 
Sbjct: 291 LLLG-----EIPE-RSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDR 350

Query: 287 NLGLVKQVVSSIYKRNIQRLTQTYLTLSLQDIANTVQLNSPK---EAEMHVLQMIQDGHI 346
              L+ ++  ++ +  ++ ++ +Y  +SL D+A  ++LNS     +AE  V + I+DG I
Sbjct: 351 THNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAI 410

Query: 347 YATINQRDGMVQFLEDPEQYKSCE 367
            ATI+ ++G +   E  + Y + E
Sbjct: 411 DATIDHKNGCMVSKETGDIYSTNE 427

[Close]

BLAST of Spo22988.1 vs. TAIR (Arabidopsis)
Match: AT1G75990.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.400e-6
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1


		  
Query: 167 FEVDQPKDLFLYCYYGGMICIGLKQFKKASEFFHNVVT-APMSTLNAIAVEAYKKYILVS 226
           FE    +    Y +Y G I     ++  A E        AP+++L    ++  K  I+V 
Sbjct: 230 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLG-FRIQCNKWAIIVR 289

Query: 227 LIHRGKFNTHFPKYTSTVAQRSLKNFSQIYLELANNYSNGNLADLETFVQVNKD---KFE 286
           L+         P+  S   Q+ ++   + Y EL N    G   DLE F ++ +     F 
Sbjct: 290 LLLG-----EIPE-RSIFTQKGMEKTLRPYFELTNAVRIG---DLELFGKIQEKFAKTFA 349

Query: 287 GDNNLGLVKQVVSSIYKRNIQRLTQTYLTLSLQDIANTVQLNSPK---EAEMHVLQMIQD 346
            D    L+ ++  ++ +  ++ ++ +Y  +SLQD+A  ++LNS     +AE  V + I+D
Sbjct: 350 EDRTHNLIVRLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRD 409

Query: 347 GHIYATINQRDGMVQFLEDPEQYKSCE 367
           G I ATI+ ++G +   E  + Y + E
Sbjct: 410 GAIDATIDHKNGCMVSKETGDIYSTNE 426

The following BLAST results are available for this feature:

BLAST of Spo22988.1 vs. NCBI nr
BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
BLAST of Spo22988.1 vs. TAIR (Arabidopsis)

BLAST of Spo22988.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902182902\|gb\|KNA10008.1\|	1.4e-239	100.	hypothetical protein SOVF_1482...	[more]
gi\|731374551\|ref\|XP_010666992.1\|	2.6e-201	85.1	PREDICTED: COP9 signalosome co...	[more]
gi\|255536979\|ref\|XP_002509556.1\|	1.1e-178	73.7	PREDICTED: COP9 signalosome co...	[more]
gi\|823253280\|ref\|XP_012459259.1\|	2.0e-177	73.5	PREDICTED: COP9 signalosome co...	[more]
gi\|225452159\|ref\|XP_002263731.1\|	2.0e-177	72.6	PREDICTED: COP9 signalosome co...	[more]

BLAST of Spo22988.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QTI6_SPIOL	1.0e-239	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B3H1_BETVU	1.8e-201	85.1	Uncharacterized protein OS=Bet...	[more]
B9RBM2_RICCO	7.5e-179	73.7	26S proteasome regulatory subu...	[more]
A0A0D2S050_GOSRA	1.4e-177	73.5	Uncharacterized protein OS=Gos...	[more]
D7UBF1_VITVI	1.4e-177	72.6	Putative uncharacterized prote...	[more]

BLAST of Spo22988.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CSN3_ARATH	8.9e-141	60.7	COP9 signalosome complex subun...	[more]
CSN3_DANRE	2.6e-76	40.8	COP9 signalosome complex subun...	[more]
CSN3_PONAB	1.0e-75	39.8	COP9 signalosome complex subun...	[more]
CSN3_HUMAN	1.0e-75	39.8	COP9 signalosome complex subun...	[more]
CSN3_MACFA	1.0e-75	39.8	COP9 signalosome complex subun...	[more]

BLAST of Spo22988.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G14250.1	5.0e-142	60.7	Proteasome component (PCI) dom...	[more]
AT1G20200.1	4.7e-7	25.4	PAM domain (PCI/PINT associate...	[more]
AT1G75990.1	1.4e-6	25.6	PAM domain (PCI/PINT associate...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 255..355 score: 4.5
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 288..378 score: 1.4
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 292..361 score: 1.1
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 289..363 score: 2.54
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 1..420 score: 1.7E
None	No IPR available	SMART	SM00753	PINT	coord: 288..378 score: 1.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009555	pollen development
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0010686	tetracyclic triterpenoid biosynthetic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0032065	cortical protein anchoring
biological_process	GO:0007165	signal transduction
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0019745	pentacyclic triterpenoid biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006810	transport
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0007389	pattern specification process
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0009725	response to hormone
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006396	RNA processing
biological_process	GO:0016571	histone methylation
biological_process	GO:0019915	lipid storage
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0051604	protein maturation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0050826	response to freezing
biological_process	GO:0048731	system development
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0000159	protein phosphatase type 2A complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0031011	Ino80 complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0016020	membrane
molecular_function	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005543	phospholipid binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004630	phospholipase D activity
molecular_function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding
molecular_function	GO:0019888	protein phosphatase regulator activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016871	cycloartenol synthase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11912	0.74	Barchart \| Table
Spo11391	0.70	Barchart \| Table
Spo00418	0.70	Barchart \| Table
Spo06497	0.70	Barchart \| Table
Spo12699	0.69	Barchart \| Table
Spo14378	0.69	Barchart \| Table
Spo19699	0.67	Barchart \| Table
Spo06550	0.67	Barchart \| Table
Spo00908	0.67	Barchart \| Table
Spo01019	0.67	Barchart \| Table
Spo14581	0.66	Barchart \| Table
Spo12735	0.66	Barchart \| Table
Spo15219	0.66	Barchart \| Table
Spo16977	0.65	Barchart \| Table
Spo24470	0.65	Barchart \| Table
Spo24128	0.65	Barchart \| Table
Spo06711	0.65	Barchart \| Table