Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTCTCAACGGACTCCCGCGCTGAAAGAAAAGTTCCATTCCCCACAGGTTCATGGTTCGGTCCTCTCCACACTTCAATCTGTTCCTTCATAAGCGTAACTGGAATACATGGCACCAAGTCCTGATAAAAAATTTGGTGACAAACAACCAGAGATTCAGAGGAATTAACTAATCTGTCATTTGAAAAATTGGTTGTTGCCATTATTTTGTTGGTGTAGACTGTAGAATGTACTTAGATGTTGCTGACTTGCTGGTATAGTACTTGGGACCCATTTGTTTCATAAATATTGAAGTGGTAAAATTGGGAACTTGACATGGAATTTGATCGGTAGCATTGCAACTGATTTGGTGGAGTTCTGGGAAAGAGCTAGAAGATTAGGATTGACGACAGGTAGCTCCTATAAGTTTAAAAGGTTAATACGAATGAAGTAAATCATTCATTCTAAGCGCCTGACCTGTAAATACTACACCAAAAAATCGCATTGATTTGGTGGTGGAGTTTTAAACTTGACTAATGCACTGATCGATATGTACACCAACAATATAATTCAATTCAATCAATTTCTTATTGGATTTGTTGTTTGATCATTTCAATTTTCTTTGATTATTACTTCTATTTTTGTTTTATGTTTAACTTTTAGGTTGATTAATTTGATTAATTAGGTGAACAATTTGTGGAAATCAAATTCTGCAGTTTAAAACCAGTTTGAGTATTTGGTGCAACTTAGTTTCAAAATAGGTGTATATTGTGCAATAGGTTTATAAATAGGGGTATTCTGTGAATTATAAACACGACTTAACGGAGGACTAACGGAAGGTCGGTTTAGGGGTATTTGGTGCAAACTTGGAAAAAAATAGGGGTATATTATGTGAATCGAAACACGCGAGGGTATTTGGTGCGTTTTTGCAAACCTCGGGGGTATTTCATGAAAAAACCGTATTTTAAAAGCCCCTGCAATAGCCCGTTTTTATCGCAACATACGTTTAAAATACCCATGCAATACCCCGGGTTAAAAAAAAATTCGCTGCAATATTGGTTGAACACTAATTCATAACAAATTAAGCATCTCAATGTTCTCGCGCTCCAACTCCCTTTCTTCTTCCCTTGGCTTTCCCTGCGTCGTCCCCTCAAAAAAAACCATTCCCTGCGTCGTCAGCTTCCTCGTCGAGTCGTCGGTGGTTCTGGCCTCCTCGCCAGTCGCCGGTGGGTTTCCTTTCTCGCCTCCTCTCCAGGTGCCGGTTTGTTCAATTCGTTTTTAGAGTTTTGTGCGTTTGTTCAATTCGTTTTAGGGTTTGTTCAATTCGTTTGTTCAATTTGTTTTTAGGGTTCAATTCGTTTGTTCAATTCGTTTGTTTAATTCGTTTTCAGGGTTTGTTCAATTCGTTTGTTTAATTCGTTTTTAGGGTTTGTTCATAGATAAAGATGTGGTGGTGTTGGAATTAGAGAATGGTGGTGGTGGTGGTGGCGGTCGTGGTTGGGTGGAGCAGGGGAGGTGGGTTGACTGTTGTTAATTGCATTTTACAATTGAAAAAGGTAATTGTCGAGTGATTAACATATTTTGCTGCTGATCCTTCACATTGTTCTCTAGCAGTCCATACCTCTAGTAAAATAATTTCCTACGCGTCTTGGGTTTGTTGCATCATTCAGGCTACCAGTGCTAATGTATTTCCATGTAGTCGTTATATTTTTTATTATTCGTAAGTTGCAGACTTGTAGTGGATTGTCAGGGGATAGCCCAATAACAGTTCTAGCTGCTAACAAATATTTCAAGCTAAAATGCATTTTTTAGTGCCATAAATAGTAACTTCATCTTGAAATTTGGCCCTGTTTTTATTATGATCTGCTTATATTAACATTGCGGTTCTTCTTGGCTGCTTCTATCTTGTTCACTGAAAGGAGTGAAGCCTAGTTCTATTGGTTGATGACTCCTCTAATCACGGGTTAACTCTATATTACACAATAACTTTTAACCAAGTATTTTATGGATGTGAGATTCAGTCAGCAAAGTGAATTGTGGTTGATATTGACCACATCAATTGATGACCATACTTGGCTTTTTGTTGGGATCAGTTTTGTTCGTTAAATGCAGCTCACATGAAAGTTGATTGTTCTTTTTCTTGTGAACTTTGTTGCTAAACATGATTATTGCTAACAACTCTATTTCTCTCCTACTAATTTTTCAAAGTTCCAGGATGGAAAAATTGGGGTTCATGGAGACCTGTCTGCTGGCGCCACAAGCTTGTCCGTGAATGCATTTACAAGAAAAGTAAGCGTTGACATATTCTTACTATAATGACATACACCTGCCAAATTTCTCTTGAAACTGTCTGATTAAAATATATTAGTACCTTAATAACTGGGTGAAGTAAAAGACCATGGGCAATTACGTTGTTTAAAATTTAATTCTTTTCCAACCCTCTCCCTCCCGTAATGGATCTATTCAGTCTAATATCATGTACAAAAGAAGAAAAGGATGAGGGGTATGTTTCCTTCTCGTCCTGTACAATATAGTTGGCAACTAAGAAGCTGAATTCAACCTTAAGTGGCTAAAAGCTTGCTAGTTTGTTTCCTTATATGGCTGAGCGGGTCCCTGTGCGATGATTGGGGTCAACTAGCTATCCATATCTGCCCACTTAAGCTCTACAGTACTCAATTCCGGTGTATCGACCAAGTAACTTCTTTGAAAAGTTTTACTTGTAGTTAATTGTCTTAAGTATATTCTACTCAATGAATTATTGAATTCTATCTTTGTCTTGATGAAATGCAACTTTCAAACTTGTGAGATATCTTTGTAAGAGTTGTTGAAAGAGGAAATTTAATTGAATTTATCTATCTTGTGTAACTGCCACCAAAGTCGATGGATTTGTTTTTTATTATTTTTTCTGACGTTTTTTTCTCTTCCCATACAGCTTCTAGCTCCATCACCTGCAGTGATGCCTCTGCGAGTCCAATATGATGTGACAGATCCAAATTCAGTCCAGAAATGGTTGGATAGATGGTCAATATCCTGCCCATGGAAACCAATTTCTCCCCCAAAGAAAGTCACTAACTCCAAGGTCCAAAAGAAGCAAGGGAACTCACTTGTTATTGATGGGTAAACAGGCAGGCCTAAGCGCAGTTTTCGCAAGGTTCCTTCCCTTTATGATAACAAGTCAACGCAGTCCACCTCTGAAGTAGAAAAACCTCGGCGAAATCTGAAGAAAGTTGTAAGCCACCTCGCAGATTTGGTGCAAGAAAATCCACAACATGAGCTTGAGAAGGTTAGACGTAGCCTCAGAAAAGTTCACACCCCTGTATCCGAAAGCTCTGTTCAGCCTCAGACTGAGGTAACTGAGAGGCATTTGAATTAGAACAAAAATAAATACATCAACAAATCAAAAATCCACCATTTTCAAACTGTCTTTTGTTCTTGTTGATACAGTTTGAAAATGGTGGATTTTTGATTTGTTGATGTATTTATTTTTGTTTTAATTCAAATGATTAGCATTGATTTTATTAGCTGTGTTTTGGGTTCCATCCTTAGTCCCTTGAACGAAGAGCTGCTGCATTCACCTGATACTGACAGGATATTCTTTGAATCCGCTTTTGATCAGTCAGAGAGATATGCAATGTTGTTGTATCTGTCACAATAACTGACATAGTTTGTTTAGGGTTAATAATTGACTGTTTTTGTTTGCAGATTTCCAACTTTGAATCGATGGATTCAGATGCAGACTAA ATGGAATTCTCAACGGACTCCCGCGCTGAAAGAAAAGTTCCATTCCCCACAGACTGTAGAATGTACTTAGATGTTGCTGACTTGCTGGATGGAAAAATTGGGGTTCATGGAGACCTGTCTGCTGGCGCCACAAGCTTGTCCGTGAATGCATTTACAAGAAAACTTCTAGCTCCATCACCTGCAGTGATGCCTCTGCGAGTCCAATATGATGTGACAGATCCAAATTCAGTCCAGAAATGGTTGGATAGATGGTCAATATCCTGCCCATGGAAACCAATTTCTCCCCCAAAGAAAGTCACTAACTCCAAGGTCCAAAAGAAGCAAGGGAACTCACTTGTTATTGATGGGCCTAAGCGCAGTTTTCGCAAGGTTCCTTCCCTTTATGATAACAAGTCAACGCAGTCCACCTCTGAAGTAGAAAAACCTCGGCGAAATCTGAAGAAAGTTGTAAGCCACCTCGCAGATTTGGTGCAAGAAAATCCACAACATGAGCTTGAGAAGGTTAGACGTAGCCTCAGAAAAGTTCACACCCCTGTATCCGAAAGCTCTGTTCAGCCTCAGACTGAGATTTCCAACTTTGAATCGATGGATTCAGATGCAGACTAA ATGGAATTCTCAACGGACTCCCGCGCTGAAAGAAAAGTTCCATTCCCCACAGACTGTAGAATGTACTTAGATGTTGCTGACTTGCTGGATGGAAAAATTGGGGTTCATGGAGACCTGTCTGCTGGCGCCACAAGCTTGTCCGTGAATGCATTTACAAGAAAACTTCTAGCTCCATCACCTGCAGTGATGCCTCTGCGAGTCCAATATGATGTGACAGATCCAAATTCAGTCCAGAAATGGTTGGATAGATGGTCAATATCCTGCCCATGGAAACCAATTTCTCCCCCAAAGAAAGTCACTAACTCCAAGGTCCAAAAGAAGCAAGGGAACTCACTTGTTATTGATGGGCCTAAGCGCAGTTTTCGCAAGGTTCCTTCCCTTTATGATAACAAGTCAACGCAGTCCACCTCTGAAGTAGAAAAACCTCGGCGAAATCTGAAGAAAGTTGTAAGCCACCTCGCAGATTTGGTGCAAGAAAATCCACAACATGAGCTTGAGAAGGTTAGACGTAGCCTCAGAAAAGTTCACACCCCTGTATCCGAAAGCTCTGTTCAGCCTCAGACTGAGATTTCCAACTTTGAATCGATGGATTCAGATGCAGACTAA MEFSTDSRAERKVPFPTDCRMYLDVADLLDGKIGVHGDLSAGATSLSVNAFTRKLLAPSPAVMPLRVQYDVTDPNSVQKWLDRWSISCPWKPISPPKKVTNSKVQKKQGNSLVIDGPKRSFRKVPSLYDNKSTQSTSEVEKPRRNLKKVVSHLADLVQENPQHELEKVRRSLRKVHTPVSESSVQPQTEISNFESMDSDAD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10276.1 vs. NCBI nr
Match: gi|902157479|gb|KNA06127.1| (hypothetical protein SOVF_183940 [Spinacia oleracea]) HSP 1 Score: 298.1 bits (762), Expect = 1.100e-77 Identity = 151/167 (90.42%), Postives = 158/167 (94.61%), Query Frame = 1
BLAST of Spo10276.1 vs. NCBI nr
Match: gi|731335118|ref|XP_010678567.1| (PREDICTED: protein IQ-DOMAIN 31 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 269.2 bits (687), Expect = 5.600e-69 Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Spo10276.1 vs. NCBI nr
Match: gi|731335120|ref|XP_010678569.1| (PREDICTED: protein IQ-DOMAIN 31 isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 269.2 bits (687), Expect = 5.600e-69 Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Spo10276.1 vs. NCBI nr
Match: gi|731335124|ref|XP_010678571.1| (PREDICTED: protein IQ-DOMAIN 31 isoform X4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 269.2 bits (687), Expect = 5.600e-69 Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Spo10276.1 vs. NCBI nr
Match: gi|731335114|ref|XP_010678565.1| (PREDICTED: protein IQ-DOMAIN 31 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 269.2 bits (687), Expect = 5.600e-69 Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFU5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183940 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 7.900e-78 Identity = 151/167 (90.42%), Postives = 158/167 (94.61%), Query Frame = 1
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9G5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115010 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 3.900e-69 Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Match: B9R965_RICCO (Calmodulin binding protein, putative OS=Ricinus communis GN=RCOM_1514300 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.000e-37 Identity = 92/174 (52.87%), Postives = 122/174 (70.11%), Query Frame = 1
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Match: W9QB68_9ROSA (Protein IQ-DOMAIN 31 OS=Morus notabilis GN=L484_007623 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.900e-37 Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 1
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Match: A0A067K555_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11598 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.200e-36 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = 1
BLAST of Spo10276.1 vs. ExPASy Swiss-Prot
Match: IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.000e-30 Identity = 81/175 (46.29%), Postives = 108/175 (61.71%), Query Frame = 1
BLAST of Spo10276.1 vs. TAIR (Arabidopsis)
Match: AT1G74690.1 (IQ-domain 31) HSP 1 Score: 132.9 bits (333), Expect = 2.200e-31 Identity = 81/175 (46.29%), Postives = 108/175 (61.71%), Query Frame = 1
BLAST of Spo10276.1 vs. TAIR (Arabidopsis)
Match: AT1G18840.1 (IQ-domain 30) HSP 1 Score: 117.9 bits (294), Expect = 7.400e-27 Identity = 76/158 (48.10%), Postives = 101/158 (63.92%), Query Frame = 1
BLAST of Spo10276.1 vs. TAIR (Arabidopsis)
Match: AT1G14380.1 (IQ-domain 28) HSP 1 Score: 63.2 bits (152), Expect = 2.200e-10 Identity = 44/139 (31.65%), Postives = 71/139 (51.08%), Query Frame = 1
BLAST of Spo10276.1 vs. TAIR (Arabidopsis)
Match: AT2G02790.1 (IQ-domain 29) HSP 1 Score: 61.2 bits (147), Expect = 8.200e-10 Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo10276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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