Spo16581 (gene)

Overview
NameSpo16581
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_06156 : 1368 .. 3049 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTTATCCCATTTTACCACTTTCCATAACCCCACTCTTTCTTATATCATCTTCTTCCTCCCTTCCTTCCTCATTTTATCACAACCTAAAAGTCTAAAACCCATTTTACTATTACATTCAATTATTCTAACCTTTCTTGATCCTACATTGAAGCTTCAGAACAAGCGAGTAGCACTTAGGAAAACAGAGAGAGTATTTACTGTAGAACTAACAAAATTCTTCACTGCCCGTTCAATAATATTGAGGTATTTTTTATTTAATTTTTTGGATTTAGTTTTTATTTATTTATTGGTTATATATTGATTGCTTGAATTGGATTATGATAATGGAGTAATTTAGAAAGCAAGTACATACCATGTTCGTGAATTGTCAATGTTGTCATGCATGTTTTGTTTATAAATTAATAATGATGATTGTTGATTGGAAAATGGCCCCCATATCATGATCACTCACTTATATGAGTGGCTTCTAAGAAAGATTTCAACTTTTCTACCCCTGATTTACCAAAACCCTACATTATATTAATTATGTCACATTTTAACGGCTTCTTTATGGAGGAGTACTAGGCAACATAAGTTGGTGGAGTTAGTGGGAACTCACCTCGTGACTTTGCAAAGTCACAGGATCGAGCTCAATCAGCTGCAAGATGCTTGTGAGTGACTCAAGCGAAAACTTGCGTAACTGAGCTGGTTAACGTGTGCTAGGTGCTGGTTCAGGAGGGTACAGAGGAGTACTACGTATATTAACCTATATTAGCATGTTGTCGCCTATCACGACTTGTCAAAAATCGACCCAACCCAAAAACCGACCCGAAAATATTGGGTCTTGAACAAGATTTTGTAACCCGTAATCCGATTTTATTCGAACCCGAAAAGTAATGGGTCAAAACCCGGCCAAACCCGTTTTTGACCCGACCGATTGAAAATCGTTATCTTTATAGTAATAAATGAGAATGTGAGCAATTTTAAACATAATAAAGACGTTACTATTGCTAGGTGCAATATGATTTTGATTTGAATTAAAAGCCATTTTATGGTTGAATTTAACTAAATATAGACTTGTGTATAAAATTTTGTTAATTTATGCGCATATTTGGTATATTTATTACACAAATTAATTAAAATATAATACGTATTTTAAAATCTCAACCCGTTGAGTCGACCCGTACCCGAAAGTTCTAGGTCTTGAACAAGCATTTGTAAACTTGAACCCGAAAGTGATCGACCCGAATTAAACTAAATCTGTAAGTAATTTTTATAACCCGACCCGACCTACCCAAAAGTAATTTTTATAACCCGACCCGGACGACCCGTTCGACAACCATAACAATCCTACAACCAATTTAGTCTCGGCTTAGTTCTTATTTTGTTAGACTGAACTCCTGAAGGCTTATGTTTGAATTGTTTTACATGTCTCAAGTTCAAATTTCTCACGTTCATTTGTAATTTGTATTGCTCAACCAGTCAACTCAATATACAAAGCTCTCGCTATTTAGCGCATGGGAAGATCCAAATGTATGGAGCCTTACCGTTAATTCATGCAATAGTTATCTTAAAGTTAAAATTCAATTCCTTCAATTCAGTTGTATCATAATTTTATTAATCAATTTTCTTGTATTCCCATATATTTACCAGGTACTCATGAAGTTGGTTATGGACTCCTATATCATTCTTGTTGAATAG

mRNA sequence

ACGTTATCCCATTTTACCACTTTCCATAACCCCACTCTTTCTTATATCATCTTCTTCCTCCCTTCCTTCCTCATTTTATCACAACCTAAAAGTCTAAAACCCATTTTACTATTACATTCAATTATTCTAACCTTTCTTGATCCTACATTGAAGCTTCAGAACAAGCGAGTAGCACTTAGGAAAACAGAGAGAGTATTTACTGTAGAACTAACAAAATTCTTCACTGCCCGTTCAATAATATTGAGTTGTATCATAATTTTATTAATCAATTTTCTTGTATTCCCATATATTTACCAGGTACTCATGAAGTTGGTTATGGACTCCTATATCATTCTTGTTGAATAG

Coding sequence (CDS)

ACGTTATCCCATTTTACCACTTTCCATAACCCCACTCTTTCTTATATCATCTTCTTCCTCCCTTCCTTCCTCATTTTATCACAACCTAAAAGTCTAAAACCCATTTTACTATTACATTCAATTATTCTAACCTTTCTTGATCCTACATTGAAGCTTCAGAACAAGCGAGTAGCACTTAGGAAAACAGAGAGAGTATTTACTGTAGAACTAACAAAATTCTTCACTGCCCGTTCAATAATATTGAGTTGTATCATAATTTTATTAATCAATTTTCTTGTATTCCCATATATTTACCAGGTACTCATGAAGTTGGTTATGGACTCCTATATCATTCTTGTTGAATAG

Protein sequence

TLSHFTTFHNPTLSYIIFFLPSFLILSQPKSLKPILLLHSIILTFLDPTLKLQNKRVALRKTERVFTVELTKFFTARSIILSCIIILLINFLVFPYIYQVLMKLVMDSYIILVE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16581.1Spo16581.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo16581.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16581.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16581.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo16581.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009791 post-embryonic development
biological_process GO:0006468 protein phosphorylation
biological_process GO:0050896 response to stimulus
biological_process GO:0048367 shoot system development
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo011780.69Barchart | Table
Spo220310.69Barchart | Table
Spo190900.68Barchart | Table
Spo267630.68Barchart | Table
Spo140810.66Barchart | Table
Spo236130.66Barchart | Table