Spo24509 (gene)

Overview
NameSpo24509
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationSpoScf_00202 : 188157 .. 191927 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGGTTTTCAGCTTCGTATCTAGAAATACCAGCTTCTCTGTACGTATGGTACTGAGACTTTGAAATGGCCATGCTTTAAGGAGAAGACAAAGTGGCAGATTGGTTTGCCATGTTTGACCATGATATAAACTGAGGTGTTCCAAATGTTTTAGACTGATTACCACATATTAGGCTATTAGTTATGACTTATGACTGGAAAAAGAGTGACCTGATGATTTGAAAAACAAAATATACTCTCTTAAGTACATATACATGCATGCAAAAACGCACATACGAACTATGCACAGAAAGCAGAGAAAAAAAAAGGACAGATAAGCTTCAAAGACAAGTGGACGCAGAAGAAATCAACTAACCAGATCACGGAACTTCAGAATGTAGAACATCTCAAGATATCGACGAGTCTCCCTTCTCTCTAGTTTAGAGACATATTTCCAAAAACCGTAAACTCCCGCTAATGTCATCAACCTCTCAGAATACTTTAACCAGGTGTACCTGCAATTTTAAAACATAAACTAAGTAAGCAAGTTAAGCATAGGATTTTTTGCCAAAAAGGACCTTTTATAAGCATTTTTTTGCGAGAAAGGACCTTTTATGTCAAAATTGGTGAAATGGGACCTAAAATACAATATTTTTTGTTAAGTGGGACCTTTGCCCGGATTCTTGGAGTCAACCCAAGTTTCTGGCGTTGACTTCGACACGTGGCAGCCGGAAACTGCCACGTGTCAATATCCTTATTTTAAAAAAAAAAAAATTATTTTTTTTCCCAAAAATCATCGTTTTACTGAAACAGTTTTACCCAAAAAAAAAATCGATTCTCGATTCTCTTCTCTCTCCTCTGCTCCTTCAACTCGACGCCATTGTTGAAGATTCAAGGTTGAAGGAAAGTGCTTCTTCACTCAAATTGCTTGCCACGAATTGTTACTCAGGCCTCCACGAATCAGGTATGCTATTTCCCCCCCTCAAAATCCTCTTCAATTGTTGTAATTTTGGGTCGAAAAAATTAGGGTTCTTCCCAAATTTGGGGATTTTGTAATTCGTTGTGTATTTGTGTTTTAGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTGTTTACAAGAAGATGATTCAGAGTGGAATTGAGCCAACAATTCATACATATATTATGATGATGATGAAATCTTACTTTGATTTTTTTTTTTTTGTGGGTAAAAATGTTTCAGTAAATGATGTTGGTTTTGTAGGGAATTTTTGGGAAAATTTTTATTTTTATTTTTTTTTATTTTTATTTTTTAAATAAGGATATTGACACGTGGCAGTTTCCGGCTGCCACGTGTCGAAGTCAACGCCAGAAACTTGGGTTGACTCCAAGAATCCGGGCAAAGGTCCCACTTAACAAAAAATATTGTATTTTAGGTCCCATTTCACCAATTTTGACATAAAAGGTCCTTTCTCGCAAAAAAATGCTTATAAAAGGTCCTTTTTGGCAAAAAATCCTTAAGCATAACCTGCCTCTAAGTGCTACGCGTGCATTCCAAATCTTTCTGCACTGATACTAACCTTTCTTTGATCCTTTGCAACCCCCCGTCAGAGATTTTACTCCAGTAGCTCGGATCCTCTTTGGACTTGGTAAAAAAATCAGCCATCTTTTCTGCAGCCTGATCAGCATGATATGGATCAATATGAAATCCTGATATTCCATCTTCTATAATCTCAGCCGGACCACCATGGCATGTAGCAAATGTGGGTAGGCCACAAGTCATTGCTTCAACAACTGTTAGCCCAAATGCTTCATAAAATGCAGGCTGCAAGTCATAAATATAGCATCCTATGAGATTTGTTAACAAGGACTTATGTTATGACTTTGATTAGTGAAAGGGCTCTTGAGCTGTCTGAGCAACTCTTTTGGGAAATTAAATTTAAAAGTTCATATTGCAACTTATAACCCCGTTTTTCATACAATTCTGTGCGCCTGTCATTTTAAATACTTATTCTCCTTCATTTGAGAAATGTGGAAAAAAAGTGTTCAGAATTTCTTTTTCACTCAATGTTTTTCCTCTACTTATTATTCTGGATAGACAAGATAATTTCAGGTTTAGCTAAACATTAGACTCTGGATTTAGGAAGGATGAAAACATAGATAAAATTAGAGCATACCTGCACAAAAATACCTCCTTTGTCACAGATGTACCGGTAAAGTTCACCATTTCTCACTCTGTTCGTTTGAGAAGCTATCCACCTAAACTGTCCTTTCAAATTGTACTGCTTGATAAGGTTGTGCATCTTTTCAATTTCAGCAATCTCTTCCCTGTCATTTGACTTTTTTGCATCATTGTACCCAGCAACCACAACCAGATTTGACAGTTCCCTGAGTTTAGCATTCTTTGCATAGCACTCAACCAGTCCTGTTATGTTCTTCACATGGTCTAGCCTTGCCATGGAAAATATTATAGGCTTTGCGGGATCATCTAGTATACCACTGTATCGATGAAAATTCTAGTTAATAAAAATTGCATACCATGCAGAAAGACATGCTAAGTATCATAATGTACAGAGTAATATTTTTTATTTTATTTTTGAGATTGTCTTTGTAGTTGAATATGATCACAGCCTCACAGGTCCATATAATTTTCTACTTTTCAACATGACACAAGTGTTTTTGTTCAAAGAGAGAAAGCAGTTATTTTGTATGATACTGTATGCTAAGAGATGAACAAGAAAAATGGAGATTTATGTCCCAGTCATATAAATGATAGTTCTATGCGATTGGTGCAAGATCAATAACGAGCAAGAGGTTACATGTGTTCTTCGTTCTGTTCTGGATTGAATAAGAGCTCCTCTATGAAGCTATGAAGTGCAGTGAGCCGCTTCCCCTTCTCCGAAAATGGGAAATAGATGGACAAATCAGCCCCGGGTGAGACAATATTAAACTTGGGGTCAAAGACATCAATCCCATGAACCACCCGATACAGCCCTGGCAAAGTGAAAGCCGTATGACTTTCATATTGACCAACAGTATTTTTCCTGAAAGAAACATTATTGTTATCCAGGTGATTTAAAAAGTATAGTAGCATAATTGCTGAGAAAACGCCTTTTTGGTAGAGTTAAGTAGACGTTGTGATAAAAAAAAGGCTAAAAGTTGCTCTGGCGCAGCCTTAAAAGTTAAAATGAATATGGTTCATTTAACCAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

mRNA sequence

ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTTTGAATATGATCACAGCCTCACAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

Coding sequence (CDS)

ATGCCATGCAAGCTACTGTTGGAAGAAAGCGGCATAGCAGATATAGCGATTGATAATGTCCCATCAAAAAGCGAAAATTTGGGGACTAATTCAGTTTTACTTAGTGGTTGGTGTAGAATGAAGAATCTAATGGAAGCTGGTGAAATCTGGAACGAGATGATTGATCAAGGTTTGAACCCAGATGTTGTTACTCATAACATAATGTTAGATGGGTTGTTGAAGGTTAATAAGAAATCTGATGCAATCAAGCTTTTCGAGGTGATGAAAGTTAAGGGTCCACCCCCAAATGTTCGGACCTATACTATATTGATTAGGGATTTGTGCAAGCATTCAAAGTTGAATGAAGTTGTTGCTTACTTTGATGGGATGACTTCTTCAGGTTGTAACCCAGATGCTGCTGTATATACTTGTTTGATTACTAGATTTGGGAACCTTAAAAAGATGGATATGGTGTTTGGTTTGTTAAAAGAGCTGAAGGAAAAGGGTTACCCACCTGATGGGCAACTGTATAATGCTTTGATTAAGTTGATGACGAATAGAAGAATGCCGGATGATGCAGTTCGTTTGAATATGATCACAGCCTCACAGGAATTTGGAGCCACTCAGGGATTGAAATATCAGACATCCCAGAACTCTATATTTCAAACACCAAACAGCTCATAA

Protein sequence

MPCKLLLEESGIADIAIDNVPSKSENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRLNMITASQEFGATQGLKYQTSQNSIFQTPNSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24509.1Spo24509.1mRNA


Homology
[Close]
BLAST of Spo24509.1 vs. NCBI nr
Match: gi|902240620|gb|KNA26028.1| (hypothetical protein SOVF_000970 [Spinacia oleracea])

HSP 1 Score: 319.3 bits (817), Expect = 5.200e-84
Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D + ++ + N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDVVTHNIMLDG
Sbjct: 400 AQVLYDRLKNRFTPNTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDG 459

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LLKVNKKSDAIKLFEVMKVKGP PNVRTYTILIRDLCKHSKLNE VAYFD MTSSGCNPD
Sbjct: 460 LLKVNKKSDAIKLFEVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPD 519

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FGNLKKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVR+
Sbjct: 520 AAVYTCLITGFGNLKKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577
[Close]
BLAST of Spo24509.1 vs. NCBI nr
Match: gi|731336635|ref|XP_010679366.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 290.4 bits (742), Expect = 2.600e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592
[Close]
BLAST of Spo24509.1 vs. NCBI nr
Match: gi|731336637|ref|XP_010679367.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 290.4 bits (742), Expect = 2.600e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 386 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 445

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 446 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 505

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 506 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 549
[Close]
BLAST of Spo24509.1 vs. NCBI nr
Match: gi|720008129|ref|XP_010258534.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 260.0 bits (663), Expect = 3.800e-66
Identity = 120/164 (73.17%), Postives = 140/164 (85.37%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T SVLL+GWC++KNLMEAG++WNEMID+GL PD+V HNIML+GLL+  K+S+AIKLF
Sbjct: 415 NLQTYSVLLAGWCKVKNLMEAGKVWNEMIDKGLKPDIVAHNIMLEGLLRGKKRSEAIKLF 474

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTILIRDLCK SK+ + V YFD M   GC PD AVYTCLI  FGN 
Sbjct: 475 EIMKAKGPSPNVRSYTILIRDLCKGSKMEQAVEYFDEMLDCGCQPDPAVYTCLIVGFGNQ 534

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+GLLKE+KEKG PPDG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 535 KKMDKVYGLLKEMKEKGCPPDGRTYNALIKLMTNRQMPDDAVRV 578
[Close]
BLAST of Spo24509.1 vs. NCBI nr
Match: gi|225447826|ref|XP_002268129.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 258.5 bits (659), Expect = 1.100e-65
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534
[Close]
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2T3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_000970 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.600e-84
Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D + ++ + N  T SVLLSGWCRMKNLMEAG+IWNEMIDQGLNPDVVTHNIMLDG
Sbjct: 400 AQVLYDRLKNRFTPNTKTYSVLLSGWCRMKNLMEAGKIWNEMIDQGLNPDVVTHNIMLDG 459

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LLKVNKKSDAIKLFEVMKVKGP PNVRTYTILIRDLCKHSKLNE VAYFD MTSSGCNPD
Sbjct: 460 LLKVNKKSDAIKLFEVMKVKGPAPNVRTYTILIRDLCKHSKLNEAVAYFDEMTSSGCNPD 519

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FGNLKKMDMVFGLLKE+KEKGYPPDGQLYNALIKLMTNRRMPDDAVR+
Sbjct: 520 AAVYTCLITGFGNLKKMDMVFGLLKEMKEKGYPPDGQLYNALIKLMTNRRMPDDAVRV 577
[Close]
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g121700 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.800e-75
Identity = 135/164 (82.32%), Postives = 151/164 (92.07%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           N+ T SVLLSGWCR+KNLMEAG+IWNEMIDQGL PD+VTHNIML+GLLKV K+SDAIKLF
Sbjct: 429 NVKTYSVLLSGWCRVKNLMEAGKIWNEMIDQGLKPDLVTHNIMLNGLLKVKKRSDAIKLF 488

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           E+MK KGP PNVR+YTIL+RDLCKH+K+ E VAYFD M +SGC PDA VYTCLIT FGNL
Sbjct: 489 EIMKAKGPAPNVRSYTILMRDLCKHNKIKEAVAYFDEMRASGCEPDAGVYTCLITGFGNL 548

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMDMVFGLLKE+KEKGYPPDG+LYNALIKLMTNRRMPDDA+R+
Sbjct: 549 KKMDMVFGLLKEIKEKGYPPDGRLYNALIKLMTNRRMPDDALRI 592
[Close]
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: F6H1T3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00750 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.600e-66
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 77  NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 136

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 137 EVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 196

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 197 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 240
[Close]
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: A5AVH1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028672 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.600e-66
Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNL+EAG  WNEMID+G  PD++ H+ ML+GLLK  KKSDAIKLF
Sbjct: 371 NLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLF 430

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP PNVRTYTILIRDLCK  K+ E V YFD M  SGC PDAAVYTCLIT FGN 
Sbjct: 431 EVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQ 490

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           KKMD V+ LLKE+KEKG P DG+ YNALIKLMTNR+MPDDAVR+
Sbjct: 491 KKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRI 534
[Close]
BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Match: B9I9J7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11650g PE=4 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 2.200e-65
Identity = 118/164 (71.95%), Postives = 141/164 (85.98%), Query Frame = 1 

		  

Query: 26  NLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLF 85
           NL T +VLL+GWCR+KNLMEAG IWNEM+D+G  PD+VTHNIML+GLL+  K+SDAIK F
Sbjct: 314 NLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFF 373

Query: 86  EVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 145
           EVMK KGP P+VR+YTILIRDLCK +K+ E V YF  M  SGC+PDAAVYTCL+T +GN 
Sbjct: 374 EVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNH 433

Query: 146 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           K+MDMV+ LLKE+KEKG PPDG+ YNALIKLMT++RMPDDAVR+
Sbjct: 434 KRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRI 477
[Close]
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.600e-61
Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
[Close]
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.100e-60
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
[Close]
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.100e-60
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
[Close]
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.700e-21
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1 

		  

Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T S+LL GW +  NL +A E++ EMID G +PD+VT++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 89  KVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 148
                 P    Y++L+      ++L E V  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 149 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDA 187
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
[Close]
BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.400e-20
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1 

		  

Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T +VL  GWCR+++  +A ++  EMI+ G  P+  T+   +D   +     +A  LF+ M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329

Query: 89  KVKGPP---PNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 148
             KG     P  +T+ ++I  L K+ K  E       M S+GC PD + Y  +I      
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389

Query: 149 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           +K+D  +  L E+  KGYPPD   YN  ++++   R  D+A++L
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433
[Close]
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 9.200e-63
Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MIDQGL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+ A R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
[Close]
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.700e-61
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
[Close]
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.700e-61
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 1 

		  

Query: 13  ADIAIDNVPSK-SENLGTNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDG 72
           A +  D +  + + N+ T +VLL+GWCR++NL+EA  IWN+MID GL PD+V HN+ML+G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342

Query: 73  LLKVNKKSDAIKLFEVMKVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPD 132
           LL+  KKSDAIKLF VMK KGP PNVR+YTI+IRD CK S +   + YFD M  SG  PD
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402

Query: 133 AAVYTCLITRFGNLKKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           AAVYTCLIT FG  KK+D V+ LLKE++EKG+PPDG+ YNALIKLM N++MP+   R+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
[Close]
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.100e-22
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1 

		  

Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T S+LL GW +  NL +A E++ EMID G +PD+VT++IM+D L K  +  +A+ +   M
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298

Query: 89  KVKGPPPNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNLKKM 148
                 P    Y++L+      ++L E V  F  M  SG   D AV+  LI  F    +M
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358

Query: 149 DMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDA 187
             V+ +LKE+K KG  P+ +  N +++ +  R   D+A
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
[Close]
BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Match: AT1G73400.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.300e-21
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1 

		  

Query: 29  TNSVLLSGWCRMKNLMEAGEIWNEMIDQGLNPDVVTHNIMLDGLLKVNKKSDAIKLFEVM 88
           T +VL  GWCR+++  +A ++  EMI+ G  P+  T+   +D   +     +A  LF+ M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329

Query: 89  KVKGPP---PNVRTYTILIRDLCKHSKLNEVVAYFDGMTSSGCNPDAAVYTCLITRFGNL 148
             KG     P  +T+ ++I  L K+ K  E       M S+GC PD + Y  +I      
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389

Query: 149 KKMDMVFGLLKELKEKGYPPDGQLYNALIKLMTNRRMPDDAVRL 190
           +K+D  +  L E+  KGYPPD   YN  ++++   R  D+A++L
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 433
The following BLAST results are available for this feature:
BLAST of Spo24509.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240620|gb|KNA26028.1|5.2e-8487.6hypothetical protein SOVF_0009... [more]
gi|731336635|ref|XP_010679366.1|2.6e-7582.3PREDICTED: pentatricopeptide r... [more]
gi|731336637|ref|XP_010679367.1|2.6e-7582.3PREDICTED: pentatricopeptide r... [more]
gi|720008129|ref|XP_010258534.1|3.8e-6673.1PREDICTED: pentatricopeptide r... [more]
gi|225447826|ref|XP_002268129.1|1.1e-6573.7PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo24509.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2T3_SPIOL3.6e-8487.6Uncharacterized protein OS=Spi... [more]
A0A0J8CCN2_BETVU1.8e-7582.3Uncharacterized protein OS=Bet... [more]
F6H1T3_VITVI7.6e-6673.7Putative uncharacterized prote... [more]
A5AVH1_VITVI7.6e-6673.7Putative uncharacterized prote... [more]
B9I9J7_POPTR2.2e-6571.9Uncharacterized protein (Fragm... [more]
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BLAST of Spo24509.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP293_ARATH1.6e-6161.2Pentatricopeptide repeat-conta... [more]
PP382_ARATH3.1e-6060.1Pentatricopeptide repeat-conta... [more]
PP294_ARATH3.1e-6060.1Pentatricopeptide repeat-conta... [more]
PP129_ARATH3.7e-2134.8Pentatricopeptide repeat-conta... [more]
PP117_ARATH2.4e-2031.7Pentatricopeptide repeat-conta... [more]
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BLAST of Spo24509.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G62470.19.2e-6361.2Pentatricopeptide repeat (PPR)... [more]
AT5G14820.11.7e-6160.1Pentatricopeptide repeat (PPR)... [more]
AT3G62540.11.7e-6160.1Pentatricopeptide repeat (PPR)... [more]
AT1G77360.12.1e-2234.8Tetratricopeptide repeat (TPR)... [more]
AT1G73400.11.3e-2131.7Pentatricopeptide repeat (PPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 32..58
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 60..109
score: 8.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 121..180
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 31..62
score: 1.5E-5coord: 99..132
score: 7.1E-7coord: 63..97
score: 2.9E-5coord: 134..166
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 166..202
score: 5.799coord: 96..130
score: 11.071coord: 131..165
score: 9.821coord: 26..60
score: 10.106coord: 61..95
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 26..189
score: 6.7
NoneNo IPR availablePANTHERPTHR24015:SF429SUBFAMILY NOT NAMEDcoord: 26..189
score: 6.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0006281 DNA repair
biological_process GO:0008152 metabolic process
biological_process GO:0043562 cellular response to nitrogen levels
biological_process GO:0016042 lipid catabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0030259 lipid glycosylation
biological_process GO:0010214 seed coat development
biological_process GO:0009845 seed germination
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009411 response to UV
biological_process GO:0007275 multicellular organism development
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009409 response to cold
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0006972 hyperosmotic response
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006493 protein O-linked glycosylation
biological_process GO:0042545 cell wall modification
biological_process GO:0010362 negative regulation of anion channel activity by blue light
biological_process GO:0006013 mannose metabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0042793 plastid transcription
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006417 regulation of translation
biological_process GO:0006396 RNA processing
biological_process GO:0006364 rRNA processing
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0015976 carbon utilization
biological_process GO:0015979 photosynthesis
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0019439 aromatic compound catabolic process
biological_process GO:0019285 glycine betaine biosynthetic process from choline
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0016556 mRNA modification
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0015969 guanosine tetraphosphate metabolic process
biological_process GO:0032259 methylation
biological_process GO:0006412 translation
biological_process GO:0071705 nitrogen compound transport
biological_process GO:0050896 response to stimulus
biological_process GO:0000256 allantoin catabolic process
biological_process GO:0006145 purine nucleobase catabolic process
biological_process GO:0010136 ureide catabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006656 phosphatidylcholine biosynthetic process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006646 phosphatidylethanolamine biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0019295 coenzyme M biosynthetic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0009638 phototropism
biological_process GO:0023014 signal transduction by protein phosphorylation
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0010118 stomatal movement
biological_process GO:0006952 defense response
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0010608 posttranscriptional regulation of gene expression
biological_process GO:0010286 heat acclimation
biological_process GO:0055085 transmembrane transport
biological_process GO:0048856 anatomical structure development
biological_process GO:0050789 regulation of biological process
biological_process GO:0030154 cell differentiation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009637 response to blue light
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009750 response to fructose
biological_process GO:0009749 response to glucose
biological_process GO:0009744 response to sucrose
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0070988 demethylation
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0006950 response to stress
biological_process GO:0009860 pollen tube growth
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0030029 actin filament-based process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009060 aerobic respiration
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0055129 L-proline biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0050821 protein stabilization
biological_process GO:1902171 regulation of tocopherol cyclase activity
biological_process GO:0030001 metal ion transport
biological_process GO:0006537 glutamate biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0009725 response to hormone
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009651 response to salt stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0001101 response to acid chemical
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0030048 actin filament-based movement
biological_process GO:0009611 response to wounding
biological_process GO:0006012 galactose metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006580 ethanolamine metabolic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006508 proteolysis
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0010287 plastoglobule
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016020 membrane
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005840 ribosome
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005945 6-phosphofructokinase complex
cellular_component GO:0009365 protein histidine kinase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005730 nucleolus
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0000785 chromatin
cellular_component GO:0005576 extracellular region
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009507 chloroplast
cellular_component GO:0005694 chromosome
cellular_component GO:0005622 intracellular
cellular_component GO:0009579 thylakoid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0009536 plastid
cellular_component GO:0048046 apoplast
cellular_component GO:0005773 vacuole
cellular_component GO:0005618 cell wall
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0008728 GTP diphosphokinase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003872 6-phosphofructokinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005544 calcium-dependent phospholipid binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0018489 vanillate monooxygenase activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016298 lipase activity
molecular_function GO:0004305 ethanolamine kinase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004350 glutamate-5-semialdehyde dehydrogenase activity
molecular_function GO:0004349 glutamate 5-kinase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008886 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0052667 phosphomethylethanolamine N-methyltransferase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0000234 phosphoethanolamine N-methyltransferase activity
molecular_function GO:0071522 ureidoglycine aminohydrolase activity
molecular_function GO:0004575 sucrose alpha-glucosidase activity
molecular_function GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004697 protein kinase C activity
molecular_function GO:0000155 phosphorelay sensor kinase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0003914 DNA (6-4) photolyase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0003904 deoxyribodipyrimidine photo-lyase activity
molecular_function GO:0016906 sterol 3-beta-glucosyltransferase activity
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0016161 beta-amylase activity
molecular_function GO:0016708 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
molecular_function GO:0005506 iron ion binding
molecular_function GO:0019133 choline monooxygenase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0050242 pyruvate, phosphate dikinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0022857 transmembrane transporter activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo245210.91Barchart | Table
Spo043920.85Barchart | Table
Spo116810.81Barchart | Table
Spo258660.81Barchart | Table
Spo262240.78Barchart | Table
Spo254930.78Barchart | Table
Spo047900.76Barchart | Table
Spo254780.75Barchart | Table
Spo200430.75Barchart | Table
Spo126560.75Barchart | Table
Spo043000.75Barchart | Table
Spo208910.75Barchart | Table
Spo232580.74Barchart | Table
Spo229210.74Barchart | Table
Spo003140.74Barchart | Table
Spo136450.74Barchart | Table
Spo082890.74Barchart | Table
Spo060120.74Barchart | Table
Spo083090.74Barchart | Table
Spo207830.73Barchart | Table
Spo012300.73Barchart | Table
Spo145580.72Barchart | Table
Spo194920.72Barchart | Table
Spo055520.72Barchart | Table
Spo159490.72Barchart | Table
Spo171970.72Barchart | Table
Spo162390.71Barchart | Table
Spo068520.71Barchart | Table
Spo078560.71Barchart | Table
Spo045530.71Barchart | Table
Spo243920.71Barchart | Table
Spo027020.71Barchart | Table
Spo267030.71Barchart | Table
Spo115770.71Barchart | Table
Spo181740.71Barchart | Table
Spo054900.71Barchart | Table
Spo173450.71Barchart | Table
Spo121080.71Barchart | Table
Spo300010.70Barchart | Table
Spo024430.70Barchart | Table
Spo050200.70Barchart | Table
Spo097170.70Barchart | Table
Spo103300.70Barchart | Table
Spo122400.70Barchart | Table
Spo136430.70Barchart | Table
Spo171340.70Barchart | Table
Spo178650.70Barchart | Table
Spo198120.70Barchart | Table
Spo208010.70Barchart | Table
Spo208950.70Barchart | Table
Spo265200.70Barchart | Table
Spo267900.70Barchart | Table
Spo169120.69Barchart | Table
Spo097750.69Barchart | Table
Spo167890.69Barchart | Table
Spo259290.69Barchart | Table
Spo247700.69Barchart | Table
Spo221710.69Barchart | Table
Spo120790.69Barchart | Table
Spo171990.69Barchart | Table
Spo113030.69Barchart | Table
Spo068030.69Barchart | Table
Spo219550.68Barchart | Table
Spo144730.68Barchart | Table
Spo151800.68Barchart | Table
Spo159670.68Barchart | Table
Spo170110.68Barchart | Table
Spo055830.68Barchart | Table
Spo267390.68Barchart | Table
Spo049120.68Barchart | Table
Spo001350.68Barchart | Table
Spo213780.68Barchart | Table
Spo217490.68Barchart | Table
Spo218840.68Barchart | Table
Spo220000.68Barchart | Table
Spo016970.68Barchart | Table
Spo011740.68Barchart | Table
Spo103700.68Barchart | Table
Spo100860.67Barchart | Table
Spo191740.67Barchart | Table
Spo197280.67Barchart | Table
Spo263060.67Barchart | Table
Spo181150.67Barchart | Table
Spo273530.67Barchart | Table
Spo097120.67Barchart | Table
Spo095850.67Barchart | Table
Spo109570.67Barchart | Table
Spo265030.67Barchart | Table
Spo253240.67Barchart | Table
Spo030840.67Barchart | Table
Spo255880.67Barchart | Table
Spo015330.67Barchart | Table
Spo159900.67Barchart | Table
Spo156910.67Barchart | Table
Spo259190.67Barchart | Table
Spo081960.67Barchart | Table
Spo003840.67Barchart | Table
Spo148300.66Barchart | Table
Spo050670.66Barchart | Table
Spo202540.66Barchart | Table
Spo036500.66Barchart | Table
Spo204240.66Barchart | Table
Spo219660.66Barchart | Table
Spo256890.66Barchart | Table
Spo102800.66Barchart | Table
Spo129220.66Barchart | Table
Spo046150.66Barchart | Table
Spo257960.66Barchart | Table
Spo209490.66Barchart | Table
Spo112010.66Barchart | Table
Spo068380.66Barchart | Table
Spo041160.66Barchart | Table
Spo273540.66Barchart | Table
Spo083190.66Barchart | Table
Spo086540.66Barchart | Table
Spo078130.65Barchart | Table
Spo039850.65Barchart | Table
Spo039750.65Barchart | Table
Spo247570.65Barchart | Table
Spo164940.65Barchart | Table
Spo054380.65Barchart | Table
Spo189290.65Barchart | Table
Spo083370.65Barchart | Table
Spo051610.65Barchart | Table
Spo203570.65Barchart | Table
Spo206020.65Barchart | Table
Spo208370.65Barchart | Table
Spo139280.65Barchart | Table