Spo21361 (gene)

Overview
NameSpo21361
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNAD(P)H-quinone oxidoreductase subunit S, chloroplastic (1.6.5.-) (NAD(P)H dehydrogenase subunit S) (NDH subunit S) (NADH-plastoquinone oxidoreductase subunit S) (Protein CHLORORESPIRATORY REDUCTION 31) (Precursor)
Locationchr6 : 39370179 .. 39370940 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

mRNA sequence

ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

Coding sequence (CDS)

ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

Protein sequence

MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEMLEKQSSTTSSDIPQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21361.1Spo21361.1mRNA


Homology
[Close]
BLAST of Spo21361.1 vs. NCBI nr
Match: gi|902225773|gb|KNA20189.1| (hypothetical protein SOVF_054670 [Spinacia oleracea])

HSP 1 Score: 502.7 bits (1293), Expect = 3.800e-139
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG
Sbjct: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG
Sbjct: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180
           GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180

Query: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240
           YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML
Sbjct: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240

Query: 241 EKQSSTTSSDIPQ 254
           EKQSSTTSSDIPQ
Sbjct: 241 EKQSSTTSSDIPQ 253
[Close]
BLAST of Spo21361.1 vs. NCBI nr
Match: gi|731330729|ref|XP_010676290.1| (PREDICTED: uncharacterized protein LOC104892149 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 384.8 bits (987), Expect = 1.200e-103
Identity = 197/249 (79.12%), Postives = 217/249 (87.15%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTI---TVSAKFDLYGILG 60
           MA SSLSPPSFQGALLHKS FLGQNHIKL TQ+SIST CPKT     T++AKFDLY ILG
Sbjct: 1   MAVSSLSPPSFQGALLHKSHFLGQNHIKLSTQKSISTLCPKTISNKPTITAKFDLYQILG 60

Query: 61  GRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLG 120
           GRGLCNGE GIIEELKK++  PPQ+   +  EED D+KA+  S I+E IPE AF+KELLG
Sbjct: 61  GRGLCNGEAGIIEELKKDTQNPPQKS--EGSEEDFDNKAITASNIEEIIPENAFEKELLG 120

Query: 121 LTGGFPGGETGLRKFIEKNPPPPK-KNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           LTGGFPGGE GL+KFIEKNPPPPK +NK +E+MKMV++SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 LTGGFPGGEKGLKKFIEKNPPPPKTENKQNEDMKMVLSSKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 240
           PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRE GPPMTN KS VLEP+
Sbjct: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRENGPPMTNAKSAVLEPL 240

Query: 241 IEMLEKQSS 246
           IEMLE QS+
Sbjct: 241 IEMLENQST 247
[Close]
BLAST of Spo21361.1 vs. NCBI nr
Match: gi|734322697|gb|KHN04639.1| (hypothetical protein glysoja_021938 [Glycine soja])

HSP 1 Score: 271.2 bits (692), Expect = 1.900e-69
Identity = 143/242 (59.09%), Postives = 181/242 (74.79%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPK--TTITVSAKFDLYGILGG 60
           M SS +      G+LL +SQFLGQ+ +  L  R+ +++     TT    AKFD+  +LGG
Sbjct: 1   MMSSFVVLHGLHGSLL-RSQFLGQDTLTHLYPRNKASTIHNKPTTAQPRAKFDMLQVLGG 60

Query: 61  RGLCNGETGIIEELKKESPIPPQQKTE--KNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           RGLCNGE G+ +ELK+E  +  +       +KE++L++++  T  +     E  F+KEL+
Sbjct: 61  RGLCNGEAGLKQELKRELGVDEKAPASATSDKEQELEEESSTTQSLASVAAEDGFEKELM 120

Query: 121 GLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           GLTGGFPGGE GL+KFI++NPPP K ++G + +K+ + SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 GLTGGFPGGEKGLKKFIQENPPPLKPSQGSKSLKLAL-SKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 239
           PNNP+YMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPM NPKS VLEP 
Sbjct: 181 PNNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSAVLEPF 240
[Close]
BLAST of Spo21361.1 vs. NCBI nr
Match: gi|351725529|ref|NP_001235560.1| (uncharacterized protein LOC100527145 [Glycine max])

HSP 1 Score: 269.2 bits (687), Expect = 7.100e-69
Identity = 142/242 (58.68%), Postives = 180/242 (74.38%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPK--TTITVSAKFDLYGILGG 60
           M SS +      G+LL +SQFLGQ+ +  L  R+ +++     TT    AKFD+  +LGG
Sbjct: 1   MMSSFVVLHGLHGSLL-RSQFLGQDTLTHLYPRNKASTIHNKPTTAQPRAKFDMLQVLGG 60

Query: 61  RGLCNGETGIIEELKKESPIPPQQKTE--KNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           RGLCNGE G+ +ELK+E  +  +       +KE++L++++  T  +     E  F+KEL+
Sbjct: 61  RGLCNGEAGLKQELKRELGVDEKAPASATSDKEQELEEESSTTQSLASVAAEDGFEKELM 120

Query: 121 GLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           GLTGGFPGGE GL+KFI++NPPP K ++G + +K+ +  KK KPPELPLLLPGMIA+VKN
Sbjct: 121 GLTGGFPGGEKGLKKFIQENPPPLKPSQGSKSLKLAL-PKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 239
           PNNP+YMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPM NPKS VLEP 
Sbjct: 181 PNNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSAVLEPF 240
[Close]
BLAST of Spo21361.1 vs. NCBI nr
Match: gi|147767601|emb|CAN73381.1| (hypothetical protein VITISV_003162 [Vitis vinifera])

HSP 1 Score: 268.1 bits (684), Expect = 1.600e-68
Identity = 140/235 (59.57%), Postives = 172/235 (73.19%), Query Frame = 1 

		  

Query: 5   SLSPPSFQGALLHKSQFLGQNHIKLLTQR-SISTSCPKTTITVSAKFDLYGILGGRGLCN 64
           S + PS Q  L HKS FLGQ H     Q+ S+S +     +  SAKFDL+GI+GGRGLCN
Sbjct: 4   SFTVPSLQRPLPHKSHFLGQGHFPNNIQKASLSRTRTPLPVKASAKFDLFGIMGGRGLCN 63

Query: 65  GETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTGGFP 124
           GE G+ +ELK+     P   + K++E+         + +D+ +PE  FDKELLGLTGGFP
Sbjct: 64  GEEGLQQELKRNIEPAPSPDSVKDEEKPA------LAAVDD-VPEDGFDKELLGLTGGFP 123

Query: 125 GGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNPYYM 184
           GGE GL++F+EKNPPP K +    E   +   +K KPPELPLL+PGMIA+VKNPNNP+YM
Sbjct: 124 GGEKGLKQFLEKNPPPEKTSGNIIENARL---RKPKPPELPLLMPGMIAIVKNPNNPFYM 183

Query: 185 YCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIE 239
           YCGIVQRITDGKAGVLFEGGNWDRLITFRLEEL+RR+KGPPM NPKS +LE ++E
Sbjct: 184 YCGIVQRITDGKAGVLFEGGNWDRLITFRLEELQRRDKGPPMKNPKSAILETLLE 228
[Close]
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054670 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.700e-139
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG
Sbjct: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG
Sbjct: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180
           GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180

Query: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240
           YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML
Sbjct: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240

Query: 241 EKQSSTTSSDIPQ 254
           EKQSSTTSSDIPQ
Sbjct: 241 EKQSSTTSSDIPQ 253
[Close]
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIK5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098780 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.100e-104
Identity = 197/249 (79.12%), Postives = 217/249 (87.15%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTI---TVSAKFDLYGILG 60
           MA SSLSPPSFQGALLHKS FLGQNHIKL TQ+SIST CPKT     T++AKFDLY ILG
Sbjct: 1   MAVSSLSPPSFQGALLHKSHFLGQNHIKLSTQKSISTLCPKTISNKPTITAKFDLYQILG 60

Query: 61  GRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLG 120
           GRGLCNGE GIIEELKK++  PPQ+   +  EED D+KA+  S I+E IPE AF+KELLG
Sbjct: 61  GRGLCNGEAGIIEELKKDTQNPPQKS--EGSEEDFDNKAITASNIEEIIPENAFEKELLG 120

Query: 121 LTGGFPGGETGLRKFIEKNPPPPK-KNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           LTGGFPGGE GL+KFIEKNPPPPK +NK +E+MKMV++SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 LTGGFPGGEKGLKKFIEKNPPPPKTENKQNEDMKMVLSSKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 240
           PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRE GPPMTN KS VLEP+
Sbjct: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRENGPPMTNAKSAVLEPL 240

Query: 241 IEMLEKQSS 246
           IEMLE QS+
Sbjct: 241 IEMLENQST 247
[Close]
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZW5_EROTE (Chlororespiratory reduction31 OS=Erodium texanum GN=NDHS PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.700e-72
Identity = 155/248 (62.50%), Postives = 180/248 (72.58%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITV----SAKFDLYGIL 60
           MASSSL+ PS QG  L KS FLG   +   +Q+    S PK   T     SAKFDL+ IL
Sbjct: 1   MASSSLTLPSLQGPQL-KSHFLGTKILPRNSQKPFF-SVPKQRSTTYPKASAKFDLFQIL 60

Query: 61  GGRGLCNGETGIIEELKK---ESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDK 120
           GGRGLCNGE GI +ELKK   ++   P   TE            E S    ++PE  FDK
Sbjct: 61  GGRGLCNGEKGIEQELKKSIEQASTSPSASTE-----------TEQSSGSVQVPEDGFDK 120

Query: 121 ELLGLTGGFPGGETGLRKFIEKNPPPPKKNK---GDEEMKMVMNSKKSKPPELPLLLPGM 180
           EL+GLTGGFPGGETGL+KFIEKNPPPPKK K   G+++M  +  SKK+K PELPLL+PGM
Sbjct: 121 ELMGLTGGFPGGETGLKKFIEKNPPPPKKTKSAKGEDDMVALATSKKAKAPELPLLMPGM 180

Query: 181 IALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKS 239
           IA+VKNPNNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRL+ELERREKGPP  NPKS
Sbjct: 181 IAIVKNPNNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLDELERREKGPPAKNPKS 235
[Close]
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZA4_9ROSI (Chlororespiratory reduction31 OS=Erodium trifolium GN=NDHS PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.300e-72
Identity = 147/241 (61.00%), Postives = 177/241 (73.44%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSS++ P+ QG  L KS FLG+  +   +  S+S     +    SAKFDL+ ILGGRG
Sbjct: 1   MASSSITLPTLQGPQL-KSHFLGRKILPTNSFFSVSKHRSASYPKASAKFDLFQILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGE GI +ELKK     P      + E+        +   +  +P+  FDKEL+GLTG
Sbjct: 61  LCNGEKGIEQELKKSIEEQPSPSASTDTEQS-------SGSAEVPVPDDGFDKELMGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNK---GDEEMKMVMNSKKSKPPELPLLLPGMIALVKNP 180
           GFPGGETGLRKFIEKNPPPPKK K   G+++M  +  SKK+K PELPLL+PGMIA+VKNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKTKSAKGEDDMVALATSKKAKAPELPLLMPGMIAIVKNP 180

Query: 181 NNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMI 239
           NNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRLEELERREKGPP  NPKSVVLE ++
Sbjct: 181 NNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLEELERREKGPPAKNPKSVVLEALV 233
[Close]
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZW0_9ROSI (Chlororespiratory reduction31 OS=California macrophylla GN=NDHS PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.900e-71
Identity = 158/248 (63.71%), Postives = 178/248 (71.77%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQ-----NHIKLL--TQRSISTSCPKTTITVSAKFDLY 60
           MASSS++ PS QG  L KS FLG+     N  KL     +  STS PK     SAKFDL+
Sbjct: 1   MASSSITLPSLQGPQL-KSHFLGRKILPGNSHKLFFSVSKQRSTSYPKA----SAKFDLF 60

Query: 61  GILGGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDK 120
            ILGGRGLCNGE GI EELKK   I     +     E       E S +  K PE  FDK
Sbjct: 61  QILGGRGLCNGEKGIEEELKKS--IEETAPSLSASAETEQSSGSEESSV--KAPEDGFDK 120

Query: 121 ELLGLTGGFPGGETGLRKFIEKNPPPPKKN---KGDEEMKMVMNSKKSKPPELPLLLPGM 180
           EL+GLTGGFPGGETGLRKFIEKNPPPPKK    KG+++   +  SKK K PELPLL+PGM
Sbjct: 121 ELMGLTGGFPGGETGLRKFIEKNPPPPKKATPAKGEDKTVALATSKKMKAPELPLLMPGM 180

Query: 181 IALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKS 239
           IA+VKNPNNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRLEELERREKGPP  NP+S
Sbjct: 181 IAIVKNPNNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLEELERREKGPPAKNPRS 239
[Close]
BLAST of Spo21361.1 vs. ExPASy Swiss-Prot
Match: NDHS_ARATH (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana GN=ndhS PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.900e-67
Identity = 136/252 (53.97%), Postives = 179/252 (71.03%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTT----ITVSAKFDLYGIL 60
           MA+SS++ P+ +  + H+S+FLGQ H      RS+     + +    +    KF+L+ ++
Sbjct: 1   MATSSITIPTIRTPI-HRSKFLGQTHQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVM 60

Query: 61  GGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           GGRGLCNGE GI +EL++   I  +Q+T K  E +  ++  + S +  K+PE  F+KE++
Sbjct: 61  GGRGLCNGEKGIEKELQRN--IEDEQETSK-AENNETERESDDSNLSFKVPEDGFEKEMM 120

Query: 121 GLTGGFPGGETGLRKFIEKN---PPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIAL 180
           GLTGGFPGGE GL+ FIEKN   PPPP   K   +   V   KK K P+LPLL+PGMIA+
Sbjct: 121 GLTGGFPGGEKGLKTFIEKNPPPPPPPPPAKQGSDASAVATDKKPKAPKLPLLMPGMIAI 180

Query: 181 VKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVL 240
           VKN N+PY+MYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPP  NPKS +L
Sbjct: 181 VKNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSCIL 240

Query: 241 EPMIEMLEKQSS 246
           EP+IE ++K+ +
Sbjct: 241 EPLIEQMQKEEA 248
[Close]
BLAST of Spo21361.1 vs. TAIR (Arabidopsis)
Match: AT4G23890.1 (unknown protein)

HSP 1 Score: 256.1 bits (653), Expect = 2.200e-68
Identity = 136/252 (53.97%), Postives = 179/252 (71.03%), Query Frame = 1 

		  

Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTT----ITVSAKFDLYGIL 60
           MA+SS++ P+ +  + H+S+FLGQ H      RS+     + +    +    KF+L+ ++
Sbjct: 1   MATSSITIPTIRTPI-HRSKFLGQTHQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVM 60

Query: 61  GGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           GGRGLCNGE GI +EL++   I  +Q+T K  E +  ++  + S +  K+PE  F+KE++
Sbjct: 61  GGRGLCNGEKGIEKELQRN--IEDEQETSK-AENNETERESDDSNLSFKVPEDGFEKEMM 120

Query: 121 GLTGGFPGGETGLRKFIEKN---PPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIAL 180
           GLTGGFPGGE GL+ FIEKN   PPPP   K   +   V   KK K P+LPLL+PGMIA+
Sbjct: 121 GLTGGFPGGEKGLKTFIEKNPPPPPPPPPAKQGSDASAVATDKKPKAPKLPLLMPGMIAI 180

Query: 181 VKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVL 240
           VKN N+PY+MYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPP  NPKS +L
Sbjct: 181 VKNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSCIL 240

Query: 241 EPMIEMLEKQSS 246
           EP+IE ++K+ +
Sbjct: 241 EPLIEQMQKEEA 248
The following BLAST results are available for this feature:
BLAST of Spo21361.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902225773|gb|KNA20189.1|3.8e-139100.hypothetical protein SOVF_0546... [more]
gi|731330729|ref|XP_010676290.1|1.2e-10379.1PREDICTED: uncharacterized pro... [more]
gi|734322697|gb|KHN04639.1|1.9e-6959.0hypothetical protein glysoja_0... [more]
gi|351725529|ref|NP_001235560.1|7.1e-6958.6uncharacterized protein LOC100... [more]
gi|147767601|emb|CAN73381.1|1.6e-6859.5hypothetical protein VITISV_00... [more]
back to top
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RMQ4_SPIOL2.7e-139100.Uncharacterized protein OS=Spi... [more]
A0A0J8CIK5_BETVU8.1e-10479.1Uncharacterized protein OS=Bet... [more]
A0A0F7GZW5_EROTE3.7e-7262.5Chlororespiratory reduction31 ... [more]
A0A0F7GZA4_9ROSI6.3e-7261.0Chlororespiratory reduction31 ... [more]
A0A0F7GZW0_9ROSI6.9e-7163.7Chlororespiratory reduction31 ... [more]
back to top
BLAST of Spo21361.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDHS_ARATH3.9e-6753.9NAD(P)H-quinone oxidoreductase... [more]
back to top
BLAST of Spo21361.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G23890.12.2e-6853.9unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021659Protein of unknown function DUF3252PFAMPF11623DUF3252coord: 166..217
score: 2.1
NoneNo IPR availablePANTHERPTHR35494FAMILY NOT NAMEDcoord: 1..251
score: 3.8E
NoneNo IPR availablePANTHERPTHR35494:SF1SUBFAMILY NOT NAMEDcoord: 1..251
score: 3.8E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009987 cellular process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009704 de-etiolation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0071277 cellular response to calcium ion
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0009408 response to heat
biological_process GO:0032880 regulation of protein localization
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0051301 cell division
biological_process GO:0006606 protein import into nucleus
biological_process GO:0016310 phosphorylation
biological_process GO:0009416 response to light stimulus
biological_process GO:1901401 regulation of tetrapyrrole metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0030163 protein catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0042793 plastid transcription
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009902 chloroplast relocation
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0050992 dimethylallyl diphosphate biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006457 protein folding
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0090333 regulation of stomatal closure
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0009555 pollen development
biological_process GO:0006508 proteolysis
biological_process GO:0042548 regulation of photosynthesis, light reaction
biological_process GO:0006811 ion transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009723 response to ethylene
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0015979 photosynthesis
biological_process GO:0055085 transmembrane transport
biological_process GO:0010260 animal organ senescence
biological_process GO:0006810 transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0009611 response to wounding
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0042908 xenobiotic transport
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009658 chloroplast organization
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000023 maltose metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005634 nucleus
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005840 ribosome
cellular_component GO:0005576 extracellular region
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009523 photosystem II
cellular_component GO:0005773 vacuole
cellular_component GO:0005622 intracellular
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0004176 ATP-dependent peptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0050275 scopoletin glucosyltransferase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
molecular_function GO:0046914 transition metal ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0016871 cycloartenol synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0051119 sugar transmembrane transporter activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004462 lactoylglutathione lyase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016301 kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo088110.85Barchart | Table
Spo120050.83Barchart | Table
Spo230350.83Barchart | Table
Spo093780.80Barchart | Table
Spo232990.78Barchart | Table
Spo188440.77Barchart | Table
Spo300010.75Barchart | Table
Spo227590.75Barchart | Table
Spo219560.75Barchart | Table
Spo116300.75Barchart | Table
Spo253240.75Barchart | Table
Spo076330.75Barchart | Table
Spo238540.74Barchart | Table
Spo259530.74Barchart | Table
Spo256480.74Barchart | Table
Spo033350.74Barchart | Table
Spo215810.74Barchart | Table
Spo003140.74Barchart | Table
Spo144730.74Barchart | Table
Spo229210.74Barchart | Table
Spo114800.73Barchart | Table
Spo273240.73Barchart | Table
Spo055080.72Barchart | Table
Spo170000.72Barchart | Table
Spo050130.72Barchart | Table
Spo036380.72Barchart | Table
Spo008950.72Barchart | Table
Spo144050.72Barchart | Table
Spo272500.72Barchart | Table
Spo240720.71Barchart | Table
Spo042560.71Barchart | Table
Spo086540.71Barchart | Table
Spo100860.71Barchart | Table
Spo194310.71Barchart | Table
Spo194420.71Barchart | Table
Spo206510.71Barchart | Table
Spo214840.71Barchart | Table
Spo241450.71Barchart | Table
Spo026490.70Barchart | Table
Spo072370.70Barchart | Table
Spo115730.70Barchart | Table
Spo149230.70Barchart | Table
Spo157040.70Barchart | Table
Spo169300.70Barchart | Table
Spo036500.70Barchart | Table
Spo178600.70Barchart | Table
Spo224720.70Barchart | Table
Spo011350.69Barchart | Table
Spo150790.69Barchart | Table
Spo208370.69Barchart | Table
Spo281460.69Barchart | Table
Spo234150.68Barchart | Table
Spo076030.68Barchart | Table
Spo041230.68Barchart | Table
Spo029790.68Barchart | Table
Spo268180.68Barchart | Table
Spo015890.68Barchart | Table
Spo008030.68Barchart | Table
Spo239930.68Barchart | Table
Spo043000.68Barchart | Table
Spo159950.68Barchart | Table
Spo173450.68Barchart | Table
Spo212740.68Barchart | Table
Spo240460.67Barchart | Table
Spo148300.67Barchart | Table
Spo213960.67Barchart | Table
Spo071950.67Barchart | Table
Spo000890.67Barchart | Table
Spo118600.67Barchart | Table
Spo211350.66Barchart | Table
Spo198720.66Barchart | Table
Spo193930.66Barchart | Table
Spo237080.66Barchart | Table
Spo080480.66Barchart | Table
Spo159900.66Barchart | Table
Spo126820.66Barchart | Table
Spo094120.66Barchart | Table
Spo252620.66Barchart | Table
Spo028330.66Barchart | Table
Spo223720.66Barchart | Table
Spo069180.66Barchart | Table
Spo124910.65Barchart | Table
Spo153690.65Barchart | Table
Spo072340.65Barchart | Table
Spo081900.65Barchart | Table
Spo187030.65Barchart | Table
Spo222720.65Barchart | Table
Spo089330.65Barchart | Table
Spo267900.65Barchart | Table
Spo142640.65Barchart | Table
Spo113030.65Barchart | Table