Spo12389 (gene)

Overview
NameSpo12389
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEarly light-induced protein, putative
Locationchr6 : 37279366 .. 37280795 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCCTTCAATTTTACTACACAACGTGGATCCAAATTGTCCCTTAATTCGGATCCTACCAATTACCCGGCCTATTATAAATACAATACGCTTCACATGCATACTTCATCACCAAAAGTAACTTACACTCTCATTTTAAAGCATTCTACTTCAAAGTTTAATTGAAGTTGATTATTATCTTAATCTAAGCCACATCAAAGTTTGTTAATTAATTGTTGTAATGGCAATGTCTATGCAAGTACAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCACTAATGGCACCTCCAAGGCGTATCCACTAGGGTTTAATCCTCGGATGGCAAAACGTGTCAATTTTGGTGTTAAGTGTATGGCGGAGGAGAAGGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAACCGAACCCTACTGTATCTTCACCCACCCCTATTCCAACTCCTAGGCCTCAACCAAAGAAGGTATAAATCTATATACCTTTATGTTCTTAATTAGAAGTTGTTACATTAATTTCAATCTTAAAACTTAATTTGTTATGTTTAAGCTAAATTAATGTTTACTAGCATTTCTTTAATATTGTGAGTTGTAACTAGCTAGCTAGGCTATGTTATATGGGTAAGTCTTCTATGTAACCGTCGTACGTATAAGACCTCTAATGCCATCCTTGAAAAATATAATTGTTTGATTATAAAGTGTAACGGTTTGATTAGAAAGTATAACTATTTTATGGATTATAATTATTTAACATAATTATTTCATCACAATGTATAAAAATTTGATTAAAAAATACAACTACTTGGTAAGAAATTGGTCTAATACATTTAAGTTTCTAATGTTGTATTTGGTGCACATAAATATATTAGTACTAATTTTAGTTTGAATTTGACAGGTAAGCACAAACTTCAGAGACTTGTTCGCCTTTAGTGGCCCTGCACCGGAAAGGATCAACGGGCGCCTAGCCATGATCGGGTTTGTGGCCGCAATAGCCGTAGAGCTATCTAATGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAACGCCGAACTTTGGAATGGTAGAATTGCTATGTTAGGTCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGAGCTAACTCAAATTTTTGATGTGTGACTTGATCTAAGTTTGATATATTATGTATATAGGAAATGAATTATTATGGGATGGTTGATTACAATTTTGGGAAGGGATTAGTTTACTGTAAAATGTATTTGTAAAATACTCCTACGATGATATATAGTTATCAATTCTTAATTTGAATTCATTTCGTTGAGCCACAC

mRNA sequence

ACCCCTTCAATTTTACTACACAACGTGGATCCAAATTGTCCCTTAATTCGGATCCTACCAATTACCCGGCCTATTATAAATACAATACGCTTCACATGCATACTTCATCACCAAAAGTAACTTACACTCTCATTTTAAAGCATTCTACTTCAAAGTTTAATTGAAGTTGATTATTATCTTAATCTAAGCCACATCAAAGTTTGTTAATTAATTGTTGTAATGGCAATGTCTATGCAAGTACAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCACTAATGGCACCTCCAAGGCGTATCCACTAGGGTTTAATCCTCGGATGGCAAAACGTGTCAATTTTGGTGTTAAGTGTATGGCGGAGGAGAAGGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAACCGAACCCTACTGTATCTTCACCCACCCCTATTCCAACTCCTAGGCCTCAACCAAAGAAGGTAAGCACAAACTTCAGAGACTTGTTCGCCTTTAGTGGCCCTGCACCGGAAAGGATCAACGGGCGCCTAGCCATGATCGGGTTTGTGGCCGCAATAGCCGTAGAGCTATCTAATGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAACGCCGAACTTTGGAATGGTAGAATTGCTATGTTAGGTCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGAGCTAACTCAAATTTTTGATGTGTGACTTGATCTAAGTTTGATATATTATGTATATAGGAAATGAATTATTATGGGATGGTTGATTACAATTTTGGGAAGGGATTAGTTTACTGTAAAATGTATTTGTAAAATACTCCTACGATGATATATAGTTATCAATTCTTAATTTGAATTCATTTCGTTGAGCCACAC

Coding sequence (CDS)

ATGGCAATGTCTATGCAAGTACAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCACTAATGGCACCTCCAAGGCGTATCCACTAGGGTTTAATCCTCGGATGGCAAAACGTGTCAATTTTGGTGTTAAGTGTATGGCGGAGGAGAAGGCTGGAGGTGAACCCAAGCTTGACTCCGGTGTACCCAAACCGAACCCTACTGTATCTTCACCCACCCCTATTCCAACTCCTAGGCCTCAACCAAAGAAGGTAAGCACAAACTTCAGAGACTTGTTCGCCTTTAGTGGCCCTGCACCGGAAAGGATCAACGGGCGCCTAGCCATGATCGGGTTTGTGGCCGCAATAGCCGTAGAGCTATCTAATGGCACAGACCTATTTACTCAAATATCCGACGGTGGATCACAATGGTTCCTAGGAACAAGCATCCTTCTTTCAGTAGCATCATTAGTGCCATTGCTCCAAGGAAGCCGAGCAGAAGCAAAGACACAAGGGTTAATGAACGCCAACGCCGAACTTTGGAATGGTAGAATTGCTATGTTAGGTCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCGCTTGTTTGA

Protein sequence

MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGVPKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12389.1Spo12389.1mRNA


Homology
[Close]
BLAST of Spo12389.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 376.3 bits (965), Expect = 3.200e-101
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12389.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 354.0 bits (907), Expect = 1.700e-94
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE  AGGEPKLDSGV
Sbjct: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PK NPTVSSPTPIPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12389.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 350.1 bits (897), Expect = 2.500e-93
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNG S AYPLGFNPRM KRV+FGVKCMAEEKAGGEPKL+SG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNG-SNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGL 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PKPNP+VSS T IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGF+AAIAVELSN
Sbjct: 61  PKPNPSVSSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12389.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 348.6 bits (893), Expect = 7.100e-93
Identity = 184/197 (93.40%), Postives = 186/197 (94.42%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEK GGEPKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTV-SSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120
           PKPNPTV SSPT IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELS
Sbjct: 61  PKPNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120

Query: 121 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 180
           NGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRIAML
Sbjct: 121 NGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAML 180

Query: 181 GLVALAVTEIVKGGALV 197
           GLVALA TE V G ALV
Sbjct: 181 GLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12389.1 vs. NCBI nr
Match: gi|902194451|gb|KNA12559.1| (hypothetical protein SOVF_124910 [Spinacia oleracea])

HSP 1 Score: 347.1 bits (889), Expect = 2.100e-92
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60

Query: 61  PKPNPTVSSPTPI----PTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SSPTP     PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 197
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.200e-101
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.200e-94
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQAL+SNSVGAFTNG SKAYPLGFNPRMAKRVNFGVKCMAE  AGGEPKLDSGV
Sbjct: 1   MAMSMQVQALVSNSVGAFTNG-SKAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGV 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PK NPTVSSPTPIPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSN
Sbjct: 61  PKSNPTVSSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.700e-93
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNG S AYPLGFNPRM KRV+FGVKCMAEEKAGGEPKL+SG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNG-SNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGL 60

Query: 61  PKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSN 120
           PKPNP+VSS T IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGF+AAIAVELSN
Sbjct: 61  PKPNPSVSSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSN 120

Query: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180
           GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG
Sbjct: 121 GTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLG 180

Query: 181 LVALAVTEIVKGGALV 197
           LVALAVTEIVKGGALV
Sbjct: 181 LVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.000e-93
Identity = 184/197 (93.40%), Postives = 186/197 (94.42%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEK GGEPKLDSG+
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTV-SSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120
           PKPNPTV SSPT IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELS
Sbjct: 61  PKPNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 120

Query: 121 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 180
           NGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRIAML
Sbjct: 121 NGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAML 180

Query: 181 GLVALAVTEIVKGGALV 197
           GLVALA TE V G ALV
Sbjct: 181 GLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124910 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.400e-92
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60

Query: 61  PKPNPTVSSPTPI----PTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SSPTP     PTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 197
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.600e-46
Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGVPKP 63
           S  +Q++ +  +      T+K +  G  P + +    GV+CMAE    G P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAE----GGPTNEDSSPAP 64

Query: 64  NPTVSSPTP-IPTPRPQPK-KVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 123
           + + + P P  P+P P  K KVST F DL AFSGPAPERINGRLAM+GFVAA+AVELS G
Sbjct: 65  STSAAQPLPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKG 124

Query: 124 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 183
            ++  QISDGG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AMLGL
Sbjct: 125 ENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGL 184

Query: 184 VALAVTEIVKGGALV 197
           VALA TE VKGG LV
Sbjct: 185 VALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.500e-42
Identity = 107/197 (54.31%), Postives = 133/197 (67.51%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEP-KLDSGVPK 63
           S  +Q++ +   G  T    +     F  R+A     GV+CMA+    G+P K D  VP 
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAP---VGVRCMAQ----GDPIKEDPSVPS 64

Query: 64  PNPTVSSPTPIPTPRPQP---KKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
            + T ++P  +P   P P    KVST F DL AFSGPAPERINGRLAM+GFVAAIA+ELS
Sbjct: 65  TS-TSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMELS 124

Query: 124 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++F QISDGG  WFLGT+ LL++AS+VPL +G RAEAK++G M ++AELWNGR AML
Sbjct: 125 KGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 197
           GLVALA TE V GG LV
Sbjct: 185 GLVALAFTEYVTGGTLV 193
[Close]
BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.500e-42
Identity = 108/205 (52.68%), Postives = 139/205 (67.80%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGAFTNGTSKA-------YPLGFNPRMAKRVNFGVKCMAEEKAGGE 60
           MA+S   Q+++SNS+   TN +S++        P  + P + + V+  V+ MAE    GE
Sbjct: 1   MAVS-SCQSIMSNSM---TNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAE----GE 60

Query: 61  PKLDS--GVPKPNPTVSSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFV 120
           PK  S   V    PT S+PTP P    +P K+ST F DL AFSGPAPERINGRLAMIGFV
Sbjct: 61  PKEQSKVAVDPTTPTASTPTPQPA-YTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFV 120

Query: 121 AAIAVELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAEL 180
           AA+ VE++ G  L  Q+S GG  WFLGTS+LLS+ASL+P  QG   E+K++ +M+++AE 
Sbjct: 121 AAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEF 180

Query: 181 WNGRIAMLGLVALAVTEIVKGGALV 197
           WNGRIAMLGLVALA TE VKG +LV
Sbjct: 181 WNGRIAMLGLVALAFTEFVKGTSLV 196
[Close]
BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.200e-32
Identity = 73/118 (61.86%), Postives = 84/118 (71.19%), Query Frame = 1 

		  

Query: 76  PRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDG-GSQ 135
           P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+  G G  
Sbjct: 44  PPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 103

Query: 136 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKG 193
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AM+GLVALA TEI+ G
Sbjct: 104 WFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161
[Close]
BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.400e-32
Identity = 74/122 (60.66%), Postives = 85/122 (69.67%), Query Frame = 1 

		  

Query: 76  PRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISDG-GSQ 135
           P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+  G G  
Sbjct: 49  PPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 108

Query: 136 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGA 195
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AMLGLVALA TEI+ G  
Sbjct: 109 WFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAP 168

Query: 196 LV 197
            +
Sbjct: 169 FI 170
[Close]
BLAST of Spo12389.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 184.9 bits (468), Expect = 4.800e-47
Identity = 103/195 (52.82%), Postives = 133/195 (68.21%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGVPKP 63
           S  +Q++ +  +      T+K +  G  P + +    GV+CMAE    G P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAE----GGPTNEDSSPAP 64

Query: 64  NPTVSSPTP-IPTPRPQPK-KVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 123
           + + + P P  P+P P  K KVST F DL AFSGPAPERINGRLAM+GFVAA+AVELS G
Sbjct: 65  STSAAQPLPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKG 124

Query: 124 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 183
            ++  QISDGG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AMLGL
Sbjct: 125 ENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGL 184

Query: 184 VALAVTEIVKGGALV 197
           VALA TE VKGG LV
Sbjct: 185 VALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12389.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 174.1 bits (440), Expect = 8.500e-44
Identity = 107/197 (54.31%), Postives = 133/197 (67.51%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEP-KLDSGVPK 63
           S  +Q++ +   G  T    +     F  R+A     GV+CMA+    G+P K D  VP 
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAP---VGVRCMAQ----GDPIKEDPSVPS 64

Query: 64  PNPTVSSPTPIPTPRPQP---KKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
            + T ++P  +P   P P    KVST F DL AFSGPAPERINGRLAM+GFVAAIA+ELS
Sbjct: 65  TS-TSATPPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMELS 124

Query: 124 NGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++F QISDGG  WFLGT+ LL++AS+VPL +G RAEAK++G M ++AELWNGR AML
Sbjct: 125 KGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 197
           GLVALA TE V GG LV
Sbjct: 185 GLVALAFTEYVTGGTLV 193
The following BLAST results are available for this feature:
BLAST of Spo12389.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902150947|gb|KNA05469.1|3.2e-101100.hypothetical protein SOVF_1900... [more]
gi|902202340|gb|KNA14240.1|1.7e-9496.9hypothetical protein SOVF_1093... [more]
gi|902164229|gb|KNA06948.1|2.5e-9394.3hypothetical protein SOVF_1763... [more]
gi|902208596|gb|KNA15989.1|7.1e-9393.4hypothetical protein SOVF_0932... [more]
gi|902194451|gb|KNA12559.1|2.1e-9293.5hypothetical protein SOVF_1249... [more]
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BLAST of Spo12389.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QDX3_SPIOL2.2e-101100.Uncharacterized protein OS=Spi... [more]
A0A0K9R401_SPIOL1.2e-9496.9Uncharacterized protein OS=Spi... [more]
A0A0K9QJR9_SPIOL1.7e-9394.3Uncharacterized protein OS=Spi... [more]
A0A0K9RAF4_SPIOL5.0e-9393.4Uncharacterized protein OS=Spi... [more]
A0A0K9QZ64_SPIOL1.4e-9293.5Uncharacterized protein OS=Spi... [more]
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BLAST of Spo12389.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELIP1_ARATH8.6e-4652.8Early light-induced protein 1,... [more]
ELIP2_ARATH1.5e-4254.3Early light-induced protein 2,... [more]
ELI_PEA1.5e-4252.6Early light-induced protein, c... [more]
ELI6_HORVU3.2e-3261.8Low molecular mass early light... [more]
ELI9_HORVU5.4e-3260.6Low molecular mass early light... [more]
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BLAST of Spo12389.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22840.14.8e-4752.8Chlorophyll A-B binding family... [more]
AT4G14690.18.5e-4454.3Chlorophyll A-B binding family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 97..148
score: 4.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 79..192
score: 1.26
NoneNo IPR availableGENE3D1.20.1620.10coord: 167..194
score: 1.1E-4coord: 98..159
score: 3.
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 28..196
score: 1.4
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 28..196
score: 1.4

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo123800.91Barchart | Table
Spo123820.80Barchart | Table