Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCAAAAATATTTGAAGAAAAGTACAGGGATTATGTATTAGTTCCTTTAGGACTTATAGTGCTTGGAATATACCATTTATGGCTTCTCTTCACCATTATTCGTCGTCCTACAACAACTGTTATCGGCCTGAATGCTGTTAGCCGCCACCAATGGGTTCTCCATATGATGAGGGTTAGTCCCCTTCTCTTCTTTGTTGGATTATTTGATCTCATTTACTTAACAATTTATGGATTCAGCTTCGAATTTTGATCAATACTGTTATCTGACCTGATTTCTGAATTTGTACTCCCTATAGCTTGCTATGATTTGGCTTCTGCAGATCATGTTTCGAGTTCAAACTCAATGTTAGATCGACTATATTTGAGAACAACTGTTAAGAGAGTTCTGAAATGGTTTTATTTAATTAGTTTAGAACCCGTGTAATGCACGAGTTTATTGGGGACTAATGCTCGAAAAAAGTAATGCATACTCATCTGTCTGTAAAAGTGTTTAGTTGGAAAACACATTAAACTATTCATATGTTAGTCAACTCCAACAGAATTGGTGATGTAGTCCAGATACTATTGCAAGTTTTTATTGCTCGCTTTAGTATGGTAATTATATATACTGTGACCTGAGATGATGTTTGTGAATAGGATCCAGCAAAAAATGGTGTTCTGGCTGTACAAACAATACGGAACAACTTAATGGCGTCCACACTATTGGCGACAATAGCAATAACTCTGAGTTCCCTGATCAGTGCTATTGTGAGCAGCTCAAGTAATGAAATCTATACCATACACACAACCAAATACTTATCAGTTCTGATATGCTTCCTTGTAGCATTCTTCTGCAATATGCAGACTACCAGATACTATGCACATATCAGTTTCTTGCTTAATGTACCGGAATCATCTGACGAGGGGAGAGAAGAGTTTATTGAGTATGTCTCACAACAGTTGAATCGTGGATGCCTGTTTTGGTCTTTGGGATTGAGAGCATTCTACTTCGCTTTCCCTCTTCTGCTGTGGATCTTCGGCGCTATTGCTATGTTTACTTGTAGTTGTTCCATGGCAATTTTGCTATATTTCTTGGATACTGCTAGCTCTTCCCCAAGTTATCTTTATAATGGAAACGTGGTTAAGACTAATCGGAGCCCTGATATTGAATCAAGGTAAGTTATTAAATTGTTTAATCTCCTGCATAAATTCAATTGTTAGCCTTATGATCAAATCAAAACAAATTGTTTAATCGCACAATGTGACTAGTATTTTGCATTAGAGGCATGATTTGCATTTTCTGAAGCTGAATATTTCAGCTGCAAATTGAAATTTGTATGATATTTTAAAGGCAAGGCAATCCAATGGTTTTAATTTGTTGAATTATGAATGTGATGGTTTCAGGGGAACTGATTGGTCAGTCGATACGAACCTCCATTGCTCGCTACTAGGAAACACCAAGCCAGATTCTACTACTGA ATGAATTCAAAAATATTTGAAGAAAAGTACAGGGATTATGTATTAGTTCCTTTAGGACTTATAGTGCTTGGAATATACCATTTATGGCTTCTCTTCACCATTATTCGTCGTCCTACAACAACTGTTATCGGCCTGAATGCTGTTAGCCGCCACCAATGGGTTCTCCATATGATGAGGGATCCAGCAAAAAATGGTGTTCTGGCTGTACAAACAATACGGAACAACTTAATGGCGTCCACACTATTGGCGACAATAGCAATAACTCTGAGTTCCCTGATCAGTGCTATTGTGAGCAGCTCAAGTAATGAAATCTATACCATACACACAACCAAATACTTATCAGTTCTGATATGCTTCCTTGTAGCATTCTTCTGCAATATGCAGACTACCAGATACTATGCACATATCAGTTTCTTGCTTAATGTACCGGAATCATCTGACGAGGGGAGAGAAGAGTTTATTGAGTATGTCTCACAACAGTTGAATCGTGGATGCCTGTTTTGGTCTTTGGGATTGAGAGCATTCTACTTCGCTTTCCCTCTTCTGCTGTGGATCTTCGGCGCTATTGCTATGTTTACTTGTAGTTGTTCCATGGCAATTTTGCTATATTTCTTGGATACTGCTAGCTCTTCCCCAAGTTATCTTTATAATGGAAACGTGGTTAAGACTAATCGGAGCCCTGATATTGAATCAAGTCGATACGAACCTCCATTGCTCGCTACTAGGAAACACCAAGCCAGATTCTACTACTGA ATGAATTCAAAAATATTTGAAGAAAAGTACAGGGATTATGTATTAGTTCCTTTAGGACTTATAGTGCTTGGAATATACCATTTATGGCTTCTCTTCACCATTATTCGTCGTCCTACAACAACTGTTATCGGCCTGAATGCTGTTAGCCGCCACCAATGGGTTCTCCATATGATGAGGGATCCAGCAAAAAATGGTGTTCTGGCTGTACAAACAATACGGAACAACTTAATGGCGTCCACACTATTGGCGACAATAGCAATAACTCTGAGTTCCCTGATCAGTGCTATTGTGAGCAGCTCAAGTAATGAAATCTATACCATACACACAACCAAATACTTATCAGTTCTGATATGCTTCCTTGTAGCATTCTTCTGCAATATGCAGACTACCAGATACTATGCACATATCAGTTTCTTGCTTAATGTACCGGAATCATCTGACGAGGGGAGAGAAGAGTTTATTGAGTATGTCTCACAACAGTTGAATCGTGGATGCCTGTTTTGGTCTTTGGGATTGAGAGCATTCTACTTCGCTTTCCCTCTTCTGCTGTGGATCTTCGGCGCTATTGCTATGTTTACTTGTAGTTGTTCCATGGCAATTTTGCTATATTTCTTGGATACTGCTAGCTCTTCCCCAAGTTATCTTTATAATGGAAACGTGGTTAAGACTAATCGGAGCCCTGATATTGAATCAAGTCGATACGAACCTCCATTGCTCGCTACTAGGAAACACCAAGCCAGATTCTACTACTGA MNSKIFEEKYRDYVLVPLGLIVLGIYHLWLLFTIIRRPTTTVIGLNAVSRHQWVLHMMRDPAKNGVLAVQTIRNNLMASTLLATIAITLSSLISAIVSSSSNEIYTIHTTKYLSVLICFLVAFFCNMQTTRYYAHISFLLNVPESSDEGREEFIEYVSQQLNRGCLFWSLGLRAFYFAFPLLLWIFGAIAMFTCSCSMAILLYFLDTASSSPSYLYNGNVVKTNRSPDIESSRYEPPLLATRKHQARFYY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05069.1 vs. NCBI nr
Match: gi|902222094|gb|KNA19093.1| (hypothetical protein SOVF_064810 [Spinacia oleracea]) HSP 1 Score: 445.3 bits (1144), Expect = 7.200e-122 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Spo05069.1 vs. NCBI nr
Match: gi|731367493|ref|XP_010695642.1| (PREDICTED: uncharacterized protein LOC104908246 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 344.7 bits (883), Expect = 1.300e-91 Identity = 183/235 (77.87%), Postives = 203/235 (86.38%), Query Frame = 1
BLAST of Spo05069.1 vs. NCBI nr
Match: gi|731367495|ref|XP_010695643.1| (PREDICTED: uncharacterized protein LOC104908246 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 342.0 bits (876), Expect = 8.500e-91 Identity = 181/233 (77.68%), Postives = 201/233 (86.27%), Query Frame = 1
BLAST of Spo05069.1 vs. NCBI nr
Match: gi|902222095|gb|KNA19094.1| (hypothetical protein SOVF_064820 [Spinacia oleracea]) HSP 1 Score: 336.7 bits (862), Expect = 3.600e-89 Identity = 174/229 (75.98%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Spo05069.1 vs. NCBI nr
Match: gi|470127203|ref|XP_004299565.1| (PREDICTED: uncharacterized protein LOC101293202 [Fragaria vesca subsp. vesca]) HSP 1 Score: 268.9 bits (686), Expect = 9.200e-69 Identity = 146/236 (61.86%), Postives = 176/236 (74.58%), Query Frame = 1
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064810 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 5.000e-122 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E376_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g126180 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 9.200e-92 Identity = 183/235 (77.87%), Postives = 203/235 (86.38%), Query Frame = 1
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJI0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064820 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.500e-89 Identity = 174/229 (75.98%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Match: A0A067KTK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10693 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 5.100e-66 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Match: A0A164UVD7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023226 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 5.100e-66 Identity = 141/237 (59.49%), Postives = 172/237 (72.57%), Query Frame = 1
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Match: AT3G18215.1 (Protein of unknown function, DUF599) HSP 1 Score: 229.6 bits (584), Expect = 2.200e-60 Identity = 130/238 (54.62%), Postives = 163/238 (68.49%), Query Frame = 1
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Match: AT5G24600.1 (Protein of unknown function, DUF599) HSP 1 Score: 198.4 bits (503), Expect = 5.400e-51 Identity = 112/225 (49.78%), Postives = 149/225 (66.22%), Query Frame = 1
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Match: AT4G31330.1 (Protein of unknown function, DUF599) HSP 1 Score: 134.0 bits (336), Expect = 1.200e-31 Identity = 83/217 (38.25%), Postives = 131/217 (60.37%), Query Frame = 1
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Match: AT5G46060.1 (Protein of unknown function, DUF599) HSP 1 Score: 132.5 bits (332), Expect = 3.600e-31 Identity = 91/222 (40.99%), Postives = 131/222 (59.01%), Query Frame = 1
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Match: AT5G10580.1 (Protein of unknown function, DUF599) HSP 1 Score: 121.3 bits (303), Expect = 8.300e-28 Identity = 79/219 (36.07%), Postives = 128/219 (58.45%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05069.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05069.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05069.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05069.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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