Spo15321 (gene)

Overview
NameSpo15321
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMADS box transcription factor
Locationchr5 : 12881097 .. 12882112 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCATGACCCCAAATCACAACTCTCCCTTTCATACTTAAATTTTGATTTTTAATTTTCCCCCAATTCGAAAAACTTGCATTCCATTCCCTCGTGTCTTCCTTCCTTGCCTCATATACTCCCTGCACATTTATCTGAAAGATTATAACATTACTACATTCATACCTTAATTAGCAATACTTATAGTACTATTTATCACCTATTAACATCCCTCTTTCTCCCTCACTCACACGATCACTTATTTTCTCTCTCTTCCTCCCTATCTATATATCGTGTCTATTCATAGTTTGCGTGTGAGGGAGAAAGAGGGATTGTTCCACGAAGAGAGAGAAAATAAGAAAGTGGAAAAAATGGGGAGAGGTAGGGTTCAGCTGAAGAGGATTGAAAACAAGATCAACCGGCAAGTGACGTTCTCCAAACGTCGTATCGGGTTGCTTAAAAAGGCGCACGAGATCTCGATACTCTGCGACGCTGATGTTGGTCTCATCATCTTCTCCACCAAAGGAAAACTGTTCGAGTATGCTTCTGATTCCTGGTATGTAACTATATCATCTTGCTAATTAGTTTGATTATATTATGTTTTTCTTCAATTATCTTGCTGACATAAACTGTGACAATTATTAAGTTCCAATTTTCTTGGGTGCAATTTTATGGTATGGAGGAGAGAGAAAGAGGATGAGTACGGAATAATGGGAAATGTTTAGTACGGATTACGGAGTATATTTATCCTAGGTAGCTAGATCAGGTGGTTTCTTGATTTCTTCTGTTAAACCTAAATTGTTCCATTTTTAGGCACCTATTAGATTTATACGAACCATATGGATTAATTAATTAATTTCCATGTCAAGAACATGATGTTTGAATTAATCCCAAATAATTTTGTTGATGTCAAATATACCCACATGAATTTTATTTTGATGGAAAATAGTTTATTACTACTTACTTATTTTAATACAAAATGCAAAAACATGTTAATTATATTTATTCATTATTTTTAGCTTTATTACTCATCCATAA

mRNA sequence

TCTCATGACCCCAAATCACAACTCTCCCTTTCATACTTAAATTTTGATTTTTAATTTTCCCCCAATTCGAAAAACTTGCATTCCATTCCCTCGTGTCTTCCTTCCTTGCCTCATATACTCCCTGCACATTTATCTGAAAGATTATAACATTACTACATTCATACCTTAATTAGCAATACTTATAGTACTATTTATCACCTATTAACATCCCTCTTTCTCCCTCACTCACACGATCACTTATTTTCTCTCTCTTCCTCCCTATCTATATATCGTGTCTATTCATAGTTTGCGTGTGAGGGAGAAAGAGGGATTGTTCCACGAAGAGAGAGAAAATAAGAAAGTGGAAAAAATGGGGAGAGGTAGGGTTCAGCTGAAGAGGATTGAAAACAAGATCAACCGGCAAGTGACGTTCTCCAAACGTCGTATCGGGTTGCTTAAAAAGGCGCACGAGATCTCGATACTCTGCGACGCTGATGTTGGTCTCATCATCTTCTCCACCAAAGGAAAACTGTTCGAGTATGCTTCTGATTCCTGCTTTATTACTCATCCATAA

Coding sequence (CDS)

ATGGGGAGAGGTAGGGTTCAGCTGAAGAGGATTGAAAACAAGATCAACCGGCAAGTGACGTTCTCCAAACGTCGTATCGGGTTGCTTAAAAAGGCGCACGAGATCTCGATACTCTGCGACGCTGATGTTGGTCTCATCATCTTCTCCACCAAAGGAAAACTGTTCGAGTATGCTTCTGATTCCTGCTTTATTACTCATCCATAA

Protein sequence

MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASDSCFITHP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15321.1Spo15321.1mRNA


Homology
[Close]
BLAST of Spo15321.1 vs. NCBI nr
Match: gi|902232814|gb|KNA22806.1| (hypothetical protein SOVF_030750 [Spinacia oleracea])

HSP 1 Score: 124.0 bits (310), Expect = 9.800e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. NCBI nr
Match: gi|194500619|gb|ACE75945.2| (FRUITFULL [Spinacia oleracea])

HSP 1 Score: 124.0 bits (310), Expect = 9.800e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. NCBI nr
Match: gi|731334722|ref|XP_010678364.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.6 bits (301), Expect = 1.100e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADV LIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVALIIFSTKGKLFEYASD 60

Query: 61 SC 63
          +C
Sbjct: 61 TC 62
[Close]
BLAST of Spo15321.1 vs. NCBI nr
Match: gi|602908|emb|CAA56659.1| (SLM5 [Silene latifolia subsp. alba])

HSP 1 Score: 120.2 bits (300), Expect = 1.400e-24
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDADVGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDADVGLIVFSTKGKLFEYATD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. NCBI nr
Match: gi|747079434|ref|XP_011086917.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Sesamum indicum])

HSP 1 Score: 119.8 bits (299), Expect = 1.800e-24
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDADVGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVGLIVFSTKGKLFEYATD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Match: B3VA98_SPIOL (FRUITFULL OS=Spinacia oleracea GN=FUL PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 6.800e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTD3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_030750 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.800e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFD5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g113480 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 7.500e-25
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADV LIIFSTKGKLFEYASD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVALIIFSTKGKLFEYASD 60

Query: 61 SC 63
          +C
Sbjct: 61 TC 62
[Close]
BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Match: Q41356_SILLA (SLM5 protein OS=Silene latifolia GN=SLM5 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.800e-25
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDADVGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDADVGLIVFSTKGKLFEYATD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Match: M0ZY32_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004081 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.700e-24
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+VGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.400e-26
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+VGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.400e-26
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+VGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.400e-26
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+VGLI+FSTKGKLFEYA+D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.100e-24
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+V LI+FS+KGKLFEY++D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.100e-24
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+V L+IFS+KGKLFEY++D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Match: AT5G60910.1 (AGAMOUS-like 8)

HSP 1 Score: 113.2 bits (282), Expect = 6.100e-26
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+V LI+FS+KGKLFEY++D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 112.1 bits (279), Expect = 1.400e-25
Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEIS+LCDA+V L++FS KGKLFEY++D
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 107.8 bits (268), Expect = 2.600e-24
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRV+LKRIENKINRQVTFSKRR GLLKKA EIS+LCDA+V LI+FS KGKLFEY+S+
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61 SC 63
          SC
Sbjct: 61 SC 62
[Close]
BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Match: AT3G30260.1 (AGAMOUS-like 79)

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-21
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRVQL+RIENKI RQVTFSKRR GL+KKA EIS+LCDA+V LI+FS KGKLFEY++ 
Sbjct: 1  MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61 S 62
          S
Sbjct: 61 S 61
[Close]
BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-21
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 1 

		  

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRIGLLKKAHEISILCDADVGLIIFSTKGKLFEYASD 60
          MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+S+LCDA+V LIIFS +GKL+E+ S 
Sbjct: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61 SCFI 65
          S  +
Sbjct: 61 SSML 64
The following BLAST results are available for this feature:
BLAST of Spo15321.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902232814|gb|KNA22806.1|9.8e-26100.hypothetical protein SOVF_0307... [more]
gi|194500619|gb|ACE75945.2|9.8e-26100.FRUITFULL [Spinacia oleracea][more]
gi|731334722|ref|XP_010678364.1|1.1e-2496.7PREDICTED: truncated transcrip... [more]
gi|602908|emb|CAA56659.1|1.4e-2493.5SLM5 [Silene latifolia subsp. ... [more]
gi|747079434|ref|XP_011086917.1|1.8e-2493.5PREDICTED: truncated transcrip... [more]
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BLAST of Spo15321.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
B3VA98_SPIOL6.8e-26100.FRUITFULL OS=Spinacia oleracea... [more]
A0A0K9RTD3_SPIOL6.8e-26100.Uncharacterized protein OS=Spi... [more]
A0A0J8CFD5_BETVU7.5e-2596.7Uncharacterized protein OS=Bet... [more]
Q41356_SILLA9.8e-2593.5SLM5 protein OS=Silene latifol... [more]
M0ZY32_SOLTU3.7e-2491.9Uncharacterized protein OS=Sol... [more]
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BLAST of Spo15321.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AGL8_SOLLC3.4e-2691.9Agamous-like MADS-box protein ... [more]
AGL8_SOLCO3.4e-2691.9Agamous-like MADS-box protein ... [more]
AGL8_SOLTU3.4e-2691.9Agamous-like MADS-box protein ... [more]
AGL8_ARATH1.1e-2487.1Agamous-like MADS-box protein ... [more]
AGL8_SINAL1.1e-2487.1Agamous-like MADS-box protein ... [more]
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BLAST of Spo15321.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G60910.16.1e-2687.1AGAMOUS-like 8[more]
AT1G69120.11.4e-2585.4K-box region and MADS-box tran... [more]
AT1G26310.12.6e-2483.8K-box region and MADS-box tran... [more]
AT3G30260.11.2e-2178.6AGAMOUS-like 79[more]
AT1G24260.21.2e-2173.4K-box region and MADS-box tran... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 2.3E-31coord: 3..23
score: 2.3E-31coord: 38..59
score: 2.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 2.0
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 2.6
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
scor
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 31
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..61
score: 1.44
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..62
score: 9.0
NoneNo IPR availablePANTHERPTHR11945:SF155AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDcoord: 2..62
score: 9.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo153230.81Barchart | Table