Spo18215 (gene)

Overview
NameSpo18215
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionActin-related protein 2/3 complex subunit 5
Locationchr4 : 121704661 .. 121708481 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGAAAATGCAGAAGCCATCATCACTCAAATCGAGCACAAATCGAAAGCTTACTCAAACAGTATTCCAATTTTCTCTCACCTCCTTTTATTCATAGTTTCAATTTTTTCCAATTTCTATTCATCATTGTCATTTTTATTTTTGGGTTTAACAAAAATTGGGATAAAAATAATTAGGTACAAACCTGTTGAAGCTCTCAAAACTCAAAAATGCGCTTGAAGGTTCATCTGCCATTACTAAAGATGATTGCTGAAAGGTTAACATTCACATTTATCATTTTTTATTTAATAATTTGATCGTTTTTGAGTTCTAGGGTTTGTACTTTTGGTTTCTAATTGGGGAAAAATTGTGTGTAGTTGGCGAATGGATAGCGGTTCATCGGGCGACAATGGCAATTAAAGACGTTGATGGGATGCTAGCTTCTTTGGATTCCCGAGTATTATGATATTTTCATCAAGTATGTAACCTTCATTTTTTTTTAATTTTTTTTTTTGGCTAATAAAAGGAAATTTTATTACCAAAAGGCTAAAACACGGAAACCAATAACAACCAAGAAGGAAAATTTGGTAATATTAATCCAACCTTTGGCCGATTTTCTTTTATTAATCCCACCTACGACATATTTTTTAATAATCTCACCTTTACTACCCAATAACTTTTATTGGGCTCAAGTGATCGAAAATCGGTGAAAAAGTCAACGAGATGGTGATGAATTGATGATAATGACTGAATATATCGAGAGAGGGTACTTCCACGTAGAGACATATTACCGTCTACAACAAGTTTATTACCTGTTAGGCCCAATAAAAGTCGTTGGGTAGTAAAGGTGGGATTATTAAAAAATATGTCGTAGGTGGACTTAATAAAAGAAAATCGGCCAAAGGTTGGATTAATATTACCAAATTTTCCCAACCAAGAATTACAAAACTTGAAAAACAACCAAGAAGCACAAAGCATCAGGGTGAAATTGGGGTGAATTTGGAATTGTTGCTCATATGATGCAGTTTTGTTGGCTATATACCATAATGTAGGTTCAGAAAGCAGACAAAATGGGCTTATAAGCACTATAACTCTAGAACATTTAGTCCTAGACTGAGGGAAATTATGCATTCCTCATTCCACAACCCCTTTTCCTACCTGGCAGTATATGTAACCGCCTTCAATCATGTATAGAAGAACTCGATGGCAAATTTGGACATTGTATTAGGATATGCACTAGGTGGATAGAAATAGTGAAACATAACTGTGTACTTATTCTTGATAGAGTCTATTTATTTTGAATGTTCTCTTAGAATTGCCAAAATATATCTCGAACTTTGAAAGATGGCTGGTATAGTGTTTGAGTTAGGTAAAATAGTTATAGATTTGATCGGGTTGTTGTAACTTTCTTTGCAACGGGTTGGCAGTTCTATACCCATATTACAGCATAGATGCGCCCATGATTGAAAAGAGATTATATGGTTCAGTACTTTTGGAGGTGATTCCATTTACTGTTTGTGACAGAAGCATGCTGCAATATTGAATTGCACTCCTCTTTTCTGCATGTTGGTATTGTCTAACTTGAAACCAAATGCCAAGTGGATAACAGTAAATCGATCTGAAGCATGAATTGTCTGATATTGAAGAAAAAAAAGAATAACATCCTGTTGCCTGCAATTATTAATGATAAGGTTTGAAGGAGGACGGAAGAGGAGGTCTAAATATATCAAATGATTGCATGCTAGCAAAGGTAGTAACCTGGTTGTGGCCCTTGGGAGATCGTTGATATTCCTCAAAGTTTATTGGAACATGGTAGGAATAGTGCATTTTCCAATTAATGTTTATCATGTTGGTTTAGTTTGATGTGCATACTGGTAATTGGCTTCAGCTTTCTGGGTGCTGATCAAATGGGCTGTGCCAGCATTTGTAGGATAGTGTGTTGAAACCGTTTTTTGGTCATTTTATCATGCAACTTGATATCATATGCCAGAGATAGTTTCCTATGAAATAGAAGCATGAACTTGTAATATTGTAGTATGCATAGCTAGGGGAAATACTATTATAGGAAATATGTGACAGGAAAGGCATTGAAAATTGTGATAATGGGACTAAATGATTCAATTTCGACTTCAACAATGTCTTTGAATAGCTACGGTGGGAAAGGGGGGAGAGCCGAAGGGATTATTGGTCTTGTGTTTCCTCTTCTATTCCCCCAATCTATATCCATATCAAGGGAATGGATCCATCACTCTACCTTTCCACCAACTCAATTCAAATCATCTCTTCCAAACACTCTGTCAATACCTAGATAGTCAAGAAAGAGAAATAACTTTCAGGCTTTGCTTTAGTCTTCTCCTACAAATTTTGTTTGCTAATTCCTCCCTTCTTTTCGACCTTTGGTACTCCGTATTGGATATAGATAATGGTTTTTTTATTCTTTTACAGGATGATTCAGTGAAATGGATGGGTACTGACTACTGAGTACTGACAAAATTGGAAATGGAAGACTCTAAAACCTGTAACCCCCATTTTCACTTTGTCCCATGTAAGACGAGACATTTGATAGATGTCATATTAACCGGAGATTGTACGGCTTGGAATGTGAAACCAATCAAATTAAATGTATGAGAAAAGATATTAAGGAGCTCGAGGAAGAGGAAAAGATAGAAGAAAAAAAATGAATATTGTAAGAGAAAATGAGTGGAAAGTTGTAAATGCTATTGGATAAAAGGGGTAAGATAGTAAATTTTCATGTCAAAAATAGAATAAAGCAAAGTGTAAAGAATATTGTGAAACAAACTAAAACGGAAAAGTGTAAAGATCATTTTGAAAAGGATGTAGTAATTGTTTGTCCTGAAAGAGTATGAACTATTGATTAATTAAGTAGGAGTAGTACCCATTTAGGGAATAATCAAGTAATCATGAAGAAGAGGATTCGTCTTTGTTTTAATTTCCAGAAGTGGGGCTTCAAATTAGAACGTTGATCTTGTGTCACCACCGCAATCTGATGACGATACCATTCATATATATATATATATATATGCACATATTTACAAAAATGAACTCTACTAAAAGTACTACGGGGCAACGCTCGGGCCACACTCTAGTGTTGTTGAAATAAGGTGTGACCGCTAGACATTTGGATTTTATATGATTTCAAGAGCGAACTTTTATGTTTACATCAATATTAATCTTGTCCACTAGTCATGAATCTTGACCCAAAAACTTCGAAGTTTGCCTTATTGGAATTGAAATATGGAATGAAGGATTTCAAGCATTGGAGACAAAGTTGAGTCAACTCGTTTGATCCTATTCATCTCCAAATAATGTTCAAACACGACCTTATAAAGCTATAAACAACATTTCAAAAAAAATTCACAAAAAGAATTTATTAAGTAATTTACCATTTTTTTTGGATGAAATTTACCTTACTATTTAAAAACCCACTTATGTCATTTCCTAATTAAAAAAACATAAATCTTCCGTACTCATTAACTTGGATAATTTTAAACACTCGTATGAAAAAAATTACTTCCTTCGATCATTTTTACTCGCAACGTTTGTCACTTTCACGCATGTCACATATTGGATATTCACATATTGTTGTTGTAAATCTATGTAGTTTTTGTTGTTGTTGTTAGCAGTCTGGTCAGGTGCAGGGGGCTGCTGCAGGTCTGGCCTGGTGTCTCTGGGCTGGTGGTGGCCTGTTTCAGGTTGCTCGTTCTGGTTGCAGTGTTCTGTTGGCTCTGCTTTTGATGTTGTTTGTGCTGTTGTTTCTTTTGTAGTTTTTCTTTTGTGCTTTTTCCAAGGTTGCGGGTTGTGCACCTTTAAGTGTGG

mRNA sequence

ATGGCAATGAAAATGCAGAAGCCATCATCACTCAAATCGAGCACAAATCGAAAGCTTACTCAAACAGGTTTGTACTTTTGGTTTCTAATTGGGGAAAAATTGTGTGTAGTTGGCGAATGGATAGCGGTTCATCGGGCGACAATGGCAATTAAAGACGTTGATGGGATGCTAGCTTCTTTGGATTCCCGAGATGATTCAGTGAAATGGATGGGTACTGACTACTGAGTACTGACAAAATTGGAAATGGAAGACTCTAAAACCTGTAACCCCCATTTTCACTTTGTCCCATGTAAGACGAGACATTTGATAGATGTCATATTAACCGGAGATTGTACGGCTTGGAATGTGAAACCAATCAAATTAAATGTATGAGAAAAGATATTAAGGAGCTCGAGGAAGAGGAAAAGATAGAAGAAAAAAAATGAATATTGTAAGAGAAAATGAGTGGAAAGTTGTAAATGCTATTGGATAAAAGGGGTAAGATAGTAAATTTTCATGTCAAAAATAGAATAAAGCAAAGTGTAAAGAATATTGTGAAACAAACTAAAACGGAAAAGTGTAAAGATCATTTTGAAAAGGATGTAGTAATTGTTTGTCCTGAAAGAGTATGAACTATTGATTAATTAAGTAGGAGTAGTACCCATTTAGGGAATAATCAAGTAATCATGAAGAAGAGGATTCGTCTTTGTTTTAATTTCCAGAAGTGGGGCTTCAAATTAGAACGTTGATCTTGTGTCACCACCGCAATCTGATGACGATACCATTCATATATATATATATATATATGCACATATTTACAAAAATGAACTCTACTAAAAGTACTACGGGGCAACGCTCGGGCCACACTCTAGTGTTGTTGAAATAAGGTGTGACCGCTAGACATTTGGATTTTATATGATTTCAAGAGCGAACTTTTATGTTTACATCAATATTAATCTTGTCCACTAGTCATGAATCTTGACCCAAAAACTTCGAAGTTTGCCTTATTGGAATTGAAATATGGAATGAAGGATTTCAAGCATTGGAGACAAAGTTGAGTCAACTCGTTTGATCCTATTCATCTCCAAATAATGTTCAAACACGACCTTATAAAGCTATAAACAACATTTCAAAAAAAATTCACAAAAAGAATTTATTAAGTAATTTACCATTTTTTTTGGATGAAATTTACCTTACTATTTAAAAACCCACTTATGTCATTTCCTAATTAAAAAAACATAAATCTTCCGTACTCATTAACTTGGATAATTTTAAACACTCGTATGAAAAAAATTACTTCCTTCGATCATTTTTACTCGCAACGTTTGTCACTTTCACGCATGTCACATATTGGATATTCACATATTGTTGTTGTAAATCTATGTAGTTTTTGTTGTTGTTGTTAGCAGTCTGGTCAGGTGCAGGGGGCTGCTGCAGGTCTGGCCTGGTGTCTCTGGGCTGGTGGTGGCCTGTTTCAGGTTGCTCGTTCTGGTTGCAGTGTTCTGTTGGCTCTGCTTTTGATGTTGTTTGTGCTGTTGTTTCTTTTGTAGTTTTTCTTTTGTGCTTTTTCCAAGGTTGCGGGTTGTGCACCTTTAAGTGTGG

Coding sequence (CDS)

ATGGCAATGAAAATGCAGAAGCCATCATCACTCAAATCGAGCACAAATCGAAAGCTTACTCAAACAGGTTTGTACTTTTGGTTTCTAATTGGGGAAAAATTGTGTGTAGTTGGCGAATGGATAGCGGTTCATCGGGCGACAATGGCAATTAAAGACGTTGATGGGATGCTAGCTTCTTTGGATTCCCGAGATGATTCAGTGAAATGGATGGGTACTGACTACTGA

Protein sequence

MAMKMQKPSSLKSSTNRKLTQTGLYFWFLIGEKLCVVGEWIAVHRATMAIKDVDGMLASLDSRDDSVKWMGTDY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18215.1Spo18215.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo18215.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18215.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18215.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18215.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
cellular_component GO:0005885 Arp2/3 protein complex
RNA-Seq Expression
   



Co-expression
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