Spo19939 (gene)

Overview
NameSpo19939
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr4 : 118088149 .. 118089351 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCCTTTCGCTGCGCCAGCACTTCCCAAAATCTACTTCAATCAACAATTCTTAGACAATTATTTAACCAACGATTAATACATAAACATGCTTCATCAACCCCATTATCATCTTCGTGTTCATCTGATCAATCCTGTAGTAGCATACAAAAGCTGTTTCACAAGGATTGGTTATCCCCAAATGAAGTTGCTAAAATCTTCACTACATTAGAGCCCAATTCAGTTCTTCCTATATTTGATCACATATCCAAGCGCAAAGATTATAAACCCAATGAATCCCTTTTTACTGTGATCGTCGCCAAGCTCGGCGAAGCGAAAAACTTTGCTGCCATTGATGATATTCTGAAGATGATCAAAACCCAGAAAAATTGCCACATTTCTGATGAGTTTTTCTACAATGTAATCAAGGTTTATGGTAATTTGGGTGGTTTGAATAAAAGGGTAATCGAAACCCTTTACGATATGCCTGAGTATAATTGTTGGCCTTCGACGAAAACCTTCAACTTTGTGCTGAATTATCTTGTATGTTCGAAGCAGTTTGATATGATATACGAGGTTTTTCTGGGTGCTACTAAGCTTGGGGTTGAGATTGATGCTTGTACGCTTAACATTTTGATTAAAGGGTTGTGTAAATGTGGGCGGTTGGAGGATGCATACCAAGTGCTCGACGAATTTCCTAAACAAAAGTGTAAACCAAATAAGATGACTTTTTCCACTATAATGCATTGTATGTGTGAAAAGGGTATGGTGGATGAGGCATTTGGGTTGATTAAGAGGATGGAAAAGGAAAGGGTTTCGCCGGATGCGGTCACATTTAACATTTTGGTATCAGGATTGCAAAAACAAGGGAGGATTGAGGAATCAATGGAGTTATTAGATAGAATGAGGCTCATGGGTTGTGAACCTAATAAAGGAACTTATCAAGAGATTTTGTATGGTTTGCTGAAATCAAAGAGATATGTTGATGCTAAAAAGTTTGTACATATGATGAGGTATAAGGCCTTGATTCCAAGCTTTTTGTCTTACAAGTTGTTGGTGTTGGGACTATGTGAAGAGAATATGCTAAGAGATGTTGATTGGGTCTTGAAGAGTATGGTTTCAGTAGGGTTCGTACCGAGGATGGGGATGTGGAGAAGTGTTGTTAAGAAGAATTTTCCTAATGCTCCTGAAGTTTCTCTTAATGAAATTTTAGAGGATTAG

mRNA sequence

ATGAAAGCCTTTCGCTGCGCCAGCACTTCCCAAAATCTACTTCAATCAACAATTCTTAGACAATTATTTAACCAACGATTAATACATAAACATGCTTCATCAACCCCATTATCATCTTCGTGTTCATCTGATCAATCCTGTAGTAGCATACAAAAGCTGTTTCACAAGGATTGGTTATCCCCAAATGAAGTTGCTAAAATCTTCACTACATTAGAGCCCAATTCAGTTCTTCCTATATTTGATCACATATCCAAGCGCAAAGATTATAAACCCAATGAATCCCTTTTTACTGTGATCGTCGCCAAGCTCGGCGAAGCGAAAAACTTTGCTGCCATTGATGATATTCTGAAGATGATCAAAACCCAGAAAAATTGCCACATTTCTGATGAGTTTTTCTACAATGTAATCAAGGTTTATGGTAATTTGGGTGGTTTGAATAAAAGGGTAATCGAAACCCTTTACGATATGCCTGAGTATAATTGTTGGCCTTCGACGAAAACCTTCAACTTTGTGCTGAATTATCTTGTATGTTCGAAGCAGTTTGATATGATATACGAGGTTTTTCTGGGTGCTACTAAGCTTGGGGTTGAGATTGATGCTTGTACGCTTAACATTTTGATTAAAGGGTTGTGTAAATGTGGGCGGTTGGAGGATGCATACCAAGTGCTCGACGAATTTCCTAAACAAAAGTGTAAACCAAATAAGATGACTTTTTCCACTATAATGCATTGTATGTGTGAAAAGGGTATGGTGGATGAGGCATTTGGGTTGATTAAGAGGATGGAAAAGGAAAGGGTTTCGCCGGATGCGGTCACATTTAACATTTTGGTATCAGGATTGCAAAAACAAGGGAGGATTGAGGAATCAATGGAGTTATTAGATAGAATGAGGCTCATGGGTTGTGAACCTAATAAAGGAACTTATCAAGAGATTTTGTATGGTTTGCTGAAATCAAAGAGATATGTTGATGCTAAAAAGTTTGTACATATGATGAGGTATAAGGCCTTGATTCCAAGCTTTTTGTCTTACAAGTTGTTGGTGTTGGGACTATGTGAAGAGAATATGCTAAGAGATGTTGATTGGGTCTTGAAGAGTATGGTTTCAGTAGGGTTCGTACCGAGGATGGGGATGTGGAGAAGTGTTGTTAAGAAGAATTTTCCTAATGCTCCTGAAGTTTCTCTTAATGAAATTTTAGAGGATTAG

Coding sequence (CDS)

ATGAAAGCCTTTCGCTGCGCCAGCACTTCCCAAAATCTACTTCAATCAACAATTCTTAGACAATTATTTAACCAACGATTAATACATAAACATGCTTCATCAACCCCATTATCATCTTCGTGTTCATCTGATCAATCCTGTAGTAGCATACAAAAGCTGTTTCACAAGGATTGGTTATCCCCAAATGAAGTTGCTAAAATCTTCACTACATTAGAGCCCAATTCAGTTCTTCCTATATTTGATCACATATCCAAGCGCAAAGATTATAAACCCAATGAATCCCTTTTTACTGTGATCGTCGCCAAGCTCGGCGAAGCGAAAAACTTTGCTGCCATTGATGATATTCTGAAGATGATCAAAACCCAGAAAAATTGCCACATTTCTGATGAGTTTTTCTACAATGTAATCAAGGTTTATGGTAATTTGGGTGGTTTGAATAAAAGGGTAATCGAAACCCTTTACGATATGCCTGAGTATAATTGTTGGCCTTCGACGAAAACCTTCAACTTTGTGCTGAATTATCTTGTATGTTCGAAGCAGTTTGATATGATATACGAGGTTTTTCTGGGTGCTACTAAGCTTGGGGTTGAGATTGATGCTTGTACGCTTAACATTTTGATTAAAGGGTTGTGTAAATGTGGGCGGTTGGAGGATGCATACCAAGTGCTCGACGAATTTCCTAAACAAAAGTGTAAACCAAATAAGATGACTTTTTCCACTATAATGCATTGTATGTGTGAAAAGGGTATGGTGGATGAGGCATTTGGGTTGATTAAGAGGATGGAAAAGGAAAGGGTTTCGCCGGATGCGGTCACATTTAACATTTTGGTATCAGGATTGCAAAAACAAGGGAGGATTGAGGAATCAATGGAGTTATTAGATAGAATGAGGCTCATGGGTTGTGAACCTAATAAAGGAACTTATCAAGAGATTTTGTATGGTTTGCTGAAATCAAAGAGATATGTTGATGCTAAAAAGTTTGTACATATGATGAGGTATAAGGCCTTGATTCCAAGCTTTTTGTCTTACAAGTTGTTGGTGTTGGGACTATGTGAAGAGAATATGCTAAGAGATGTTGATTGGGTCTTGAAGAGTATGGTTTCAGTAGGGTTCGTACCGAGGATGGGGATGTGGAGAAGTGTTGTTAAGAAGAATTTTCCTAATGCTCCTGAAGTTTCTCTTAATGAAATTTTAGAGGATTAG

Protein sequence

MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLSPNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19939.1Spo19939.1mRNA


Homology
BLAST of Spo19939.1 vs. NCBI nr
Match: gi|902206466|gb|KNA15480.1| (hypothetical protein SOVF_097930 [Spinacia oleracea])

HSP 1 Score: 807.4 bits (2084), Expect = 1.100e-230
Identity = 398/400 (99.50%), Postives = 399/400 (99.75%), Query Frame = 1

		  

Query: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS 60
           MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS
Sbjct: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS 60

Query: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120
           PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK
Sbjct: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120

Query: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180
           TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ
Sbjct: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180

Query: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240
           FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST
Sbjct: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240

Query: 241 IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG 300
           IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG
Sbjct: 241 IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG 300

Query: 301 CEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD 360
           CEPNKGTYQE+LYGLLKSKRYV AKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD
Sbjct: 301 CEPNKGTYQEVLYGLLKSKRYVVAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD 360

Query: 361 WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 401
           WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED
Sbjct: 361 WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 400

BLAST of Spo19939.1 vs. NCBI nr
Match: gi|731365490|ref|XP_010694554.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 604.0 bits (1556), Expect = 1.900e-169
Identity = 299/404 (74.01%), Postives = 341/404 (84.41%), Query Frame = 1

		  

Query: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSS-SCSSDQSCSSIQKLFHKDWL 60
           MKAFRC S SQ  L ++IL   FNQ L  ++ SS  L+  S        + QKLFHKDWL
Sbjct: 1   MKAFRCTSVSQTKLGTSILSAQFNQTLTKQYTSSIQLNPPSLPLSHQTLTTQKLFHKDWL 60

Query: 61  SPNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMI 120
           SPNEV KIF+TL PNSVLP+ DHISKRKDYKPNE+L+TVI+ KL + KNF AIDD LKMI
Sbjct: 61  SPNEVVKIFSTLPPNSVLPMLDHISKRKDYKPNETLYTVIINKLAQVKNFDAIDDTLKMI 120

Query: 121 KTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSK 180
           KT KNC +SD+FFY++IKVYGNLGGL KRVIE L++MPEYNCWP+TKTFNFVLN LV S 
Sbjct: 121 KTHKNCRLSDDFFYDLIKVYGNLGGLTKRVIEILHNMPEYNCWPTTKTFNFVLNLLVNSN 180

Query: 181 QFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFS 240
            FD++YEVF+GAT LGVEID CTLNI+IKGLCKCGRLEDA+QVLDEFPKQ CKPNK TFS
Sbjct: 181 DFDVVYEVFVGATSLGVEIDGCTLNIMIKGLCKCGRLEDAFQVLDEFPKQGCKPNKQTFS 240

Query: 241 TIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLM 300
           TIMHCMC KGMVDEAFGLIKRMEKE +SPDAVTFNIL+SGLQKQGR E+S+ELLDRMRLM
Sbjct: 241 TIMHCMCGKGMVDEAFGLIKRMEKEGISPDAVTFNILISGLQKQGRTEDSIELLDRMRLM 300

Query: 301 GCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDV 360
           GC PNKG+YQE+LYGLLKSKRY DAK FVH MR K+LIPSFLSYK LVLGLC+EN+L DV
Sbjct: 301 GCNPNKGSYQEVLYGLLKSKRYGDAKSFVHRMRCKSLIPSFLSYKELVLGLCKENLLGDV 360

Query: 361 DWVLKSMVSVGFVPRMGMWRSVVKKNFP--NAPEVSL-NEILED 401
           DWVLKSMVSVGFVPRM MWR+V++K F   +AP + + +EI++D
Sbjct: 361 DWVLKSMVSVGFVPRMVMWRNVLEKIFTRRDAPHIVIFSEIVKD 404

BLAST of Spo19939.1 vs. NCBI nr
Match: gi|645239806|ref|XP_008226304.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Prunus mume])

HSP 1 Score: 452.6 bits (1163), Expect = 7.200e-124
Identity = 212/379 (55.94%), Postives = 284/379 (74.93%), Query Frame = 1

		  

Query: 26  RLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLSPNEVAKIFTTL-EPNSVLPIFDHIS 85
           RL H      P  S+  S  S    ++L HKDWL+PNEV ++FT+L +PNSV    DH S
Sbjct: 16  RLTHSTTIKNPSFSTLPSSSSSDIPKRLHHKDWLAPNEVLEVFTSLRDPNSVRTALDHYS 75

Query: 86  KRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGG 145
           KRKDYKPNE+L+T++V KL +A+ F AID+++  IK++  C +SD FF  VIK YGN+GG
Sbjct: 76  KRKDYKPNEALYTLVVNKLAQARLFDAIDNVMARIKSESKCRLSDNFFRTVIKAYGNVGG 135

Query: 146 LNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLN 205
           L  + IETLYDMP Y CWPS KTFNFVL+ LV +K FD+++EV+L A KLG+EIDAC LN
Sbjct: 136 LISKAIETLYDMPNYGCWPSVKTFNFVLHLLVSTKMFDVVHEVYLEAPKLGIEIDACCLN 195

Query: 206 ILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKE 265
           ILIKGLC+ G+L+ A +VLDEFPKQ+C PN +TFST+MH +C  G VDEAFG++KRME E
Sbjct: 196 ILIKGLCEYGKLDAALKVLDEFPKQRCMPNALTFSTLMHGLCVNGKVDEAFGMLKRMENE 255

Query: 266 RVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDA 325
            + PDA+TFNIL++GL+KQGR EE ++LL+ MR  GC+PN G+YQE+LY  L ++R+V+A
Sbjct: 256 GIDPDAITFNILIAGLRKQGRSEEGIKLLEEMRGKGCDPNAGSYQEVLYCFLDAQRFVEA 315

Query: 326 KKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKK 385
           K+F+  M  K + PSF+SYK L+ GLC+EN+++DVDWVLK M+  GF+P+MGMWR ++K 
Sbjct: 316 KEFMSWMISKGIGPSFVSYKALIHGLCKENLVQDVDWVLKQMIRQGFLPKMGMWRQILKS 375

Query: 386 NFPNAPE---VSLNEILED 401
            F        +S  EI+++
Sbjct: 376 MFSEKSSHCCISYEEIVDN 394

BLAST of Spo19939.1 vs. NCBI nr
Match: gi|657988454|ref|XP_008386399.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Malus domestica])

HSP 1 Score: 444.9 bits (1143), Expect = 1.500e-121
Identity = 198/337 (58.75%), Postives = 270/337 (80.12%), Query Frame = 1

		  

Query: 51  QKLFHKDWLSPNEVAKIFTTL-EPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNF 110
           +KL HKDWLSPNEV ++FT++ +PNS+L   DH SKRKDYKPNE+L+T+I+AKL EA+ F
Sbjct: 45  KKLHHKDWLSPNEVLQVFTSVRDPNSILTALDHYSKRKDYKPNEALYTLIIAKLAEARLF 104

Query: 111 AAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFN 170
            AID ++  IK +  C +SD+FF +VIK YGN+GG   R I+TLYDMP Y CWPS KTFN
Sbjct: 105 DAIDSVMARIKGESKCRLSDDFFRSVIKAYGNVGGFINRAIDTLYDMPRYGCWPSVKTFN 164

Query: 171 FVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQ 230
           FVL+ LV +K F++++EVFL A +LG+EIDAC+LNI+IKGLC+ G+L+ A QVLDEFPKQ
Sbjct: 165 FVLHLLVSTKMFEVVHEVFLEAPRLGIEIDACSLNIIIKGLCEFGKLDGALQVLDEFPKQ 224

Query: 231 KCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEES 290
           +C+PN +TFST+MH +C  G VDEAFGL+KRME E + PD +TFNIL++GL+K+GR +E 
Sbjct: 225 RCEPNALTFSTLMHGLCVNGKVDEAFGLLKRMEDEGIDPDTITFNILIAGLRKRGRFDEG 284

Query: 291 MELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLG 350
           ++LL+ M+  GC+PN G+YQE+LY  L ++R+++AK F+  M  K + PSF+SYK L+ G
Sbjct: 285 IKLLEEMKFKGCDPNPGSYQEVLYCFLDAQRFLEAKGFMSWMISKGVGPSFVSYKALIHG 344

Query: 351 LCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKKNF 387
           LC+EN+++DV+WVLK M+  GF+P+MGMWR ++K  F
Sbjct: 345 LCKENLVQDVEWVLKQMIRQGFLPKMGMWRQILKSMF 381

BLAST of Spo19939.1 vs. NCBI nr
Match: gi|694423021|ref|XP_009339331.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 444.9 bits (1143), Expect = 1.500e-121
Identity = 198/337 (58.75%), Postives = 268/337 (79.53%), Query Frame = 1

		  

Query: 51  QKLFHKDWLSPNEVAKIFTTL-EPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNF 110
           +KL HKDWLSPNEV ++FT++ +PNS+L   DH S RKDYKPNE+L+T+I+AKL EA+ F
Sbjct: 45  KKLHHKDWLSPNEVLQVFTSVRDPNSILTALDHYSNRKDYKPNEALYTLIIAKLAEARLF 104

Query: 111 AAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFN 170
            AID ++  IK +  C +SD+FF +VIK YGN+GG   R I+TLYDMP Y CWPS KTFN
Sbjct: 105 DAIDSVMARIKAESKCRLSDDFFRSVIKAYGNVGGFINRAIDTLYDMPRYGCWPSVKTFN 164

Query: 171 FVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQ 230
           FVL+ LV +K F++++EVFL A +LG+EIDAC+LNI+IKGLC+ G+L+ A QVLDEFPKQ
Sbjct: 165 FVLHLLVSTKMFEVVHEVFLEAPRLGIEIDACSLNIIIKGLCEFGKLDGALQVLDEFPKQ 224

Query: 231 KCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEES 290
           +C+PN +TFST+MH +C  G VDEAFGL+KRME E + PD +TFNIL++GL+KQGR +E 
Sbjct: 225 RCEPNALTFSTLMHGLCVNGKVDEAFGLLKRMEDEGIDPDTITFNILIAGLRKQGRFDEG 284

Query: 291 MELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLG 350
           ++LL+ M+  GC+PN G+YQE+LY  L ++R+++AK F+  M  K + PSF+SYK L+ G
Sbjct: 285 IKLLEEMKFKGCDPNPGSYQEVLYCFLDAQRFLEAKGFMSWMISKGVGPSFVSYKALIHG 344

Query: 351 LCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKKNF 387
           LC EN+++DV+WVLK M+  GF+P+MGMWR ++K  F
Sbjct: 345 LCNENLVQDVEWVLKQMIRQGFLPKMGMWRQILKSMF 381

BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7K0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097930 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 8.000e-231
Identity = 398/400 (99.50%), Postives = 399/400 (99.75%), Query Frame = 1

		  

Query: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS 60
           MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS
Sbjct: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLS 60

Query: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120
           PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK
Sbjct: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120

Query: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180
           TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ
Sbjct: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180

Query: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240
           FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST
Sbjct: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240

Query: 241 IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG 300
           IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG
Sbjct: 241 IMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMG 300

Query: 301 CEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD 360
           CEPNKGTYQE+LYGLLKSKRYV AKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD
Sbjct: 301 CEPNKGTYQEVLYGLLKSKRYVVAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVD 360

Query: 361 WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 401
           WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED
Sbjct: 361 WVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 400

BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E508_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g094040 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 1.300e-169
Identity = 299/404 (74.01%), Postives = 341/404 (84.41%), Query Frame = 1

		  

Query: 1   MKAFRCASTSQNLLQSTILRQLFNQRLIHKHASSTPLSS-SCSSDQSCSSIQKLFHKDWL 60
           MKAFRC S SQ  L ++IL   FNQ L  ++ SS  L+  S        + QKLFHKDWL
Sbjct: 1   MKAFRCTSVSQTKLGTSILSAQFNQTLTKQYTSSIQLNPPSLPLSHQTLTTQKLFHKDWL 60

Query: 61  SPNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMI 120
           SPNEV KIF+TL PNSVLP+ DHISKRKDYKPNE+L+TVI+ KL + KNF AIDD LKMI
Sbjct: 61  SPNEVVKIFSTLPPNSVLPMLDHISKRKDYKPNETLYTVIINKLAQVKNFDAIDDTLKMI 120

Query: 121 KTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSK 180
           KT KNC +SD+FFY++IKVYGNLGGL KRVIE L++MPEYNCWP+TKTFNFVLN LV S 
Sbjct: 121 KTHKNCRLSDDFFYDLIKVYGNLGGLTKRVIEILHNMPEYNCWPTTKTFNFVLNLLVNSN 180

Query: 181 QFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFS 240
            FD++YEVF+GAT LGVEID CTLNI+IKGLCKCGRLEDA+QVLDEFPKQ CKPNK TFS
Sbjct: 181 DFDVVYEVFVGATSLGVEIDGCTLNIMIKGLCKCGRLEDAFQVLDEFPKQGCKPNKQTFS 240

Query: 241 TIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLM 300
           TIMHCMC KGMVDEAFGLIKRMEKE +SPDAVTFNIL+SGLQKQGR E+S+ELLDRMRLM
Sbjct: 241 TIMHCMCGKGMVDEAFGLIKRMEKEGISPDAVTFNILISGLQKQGRTEDSIELLDRMRLM 300

Query: 301 GCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDV 360
           GC PNKG+YQE+LYGLLKSKRY DAK FVH MR K+LIPSFLSYK LVLGLC+EN+L DV
Sbjct: 301 GCNPNKGSYQEVLYGLLKSKRYGDAKSFVHRMRCKSLIPSFLSYKELVLGLCKENLLGDV 360

Query: 361 DWVLKSMVSVGFVPRMGMWRSVVKKNFP--NAPEVSL-NEILED 401
           DWVLKSMVSVGFVPRM MWR+V++K F   +AP + + +EI++D
Sbjct: 361 DWVLKSMVSVGFVPRMVMWRNVLEKIFTRRDAPHIVIFSEIVKD 404

BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Match: F6GX44_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0138g00130 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.100e-118
Identity = 197/352 (55.97%), Postives = 273/352 (77.56%), Query Frame = 1

		  

Query: 50  IQKLFHKDWLSPNEVAKIFTTLE-PNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKN 109
           +++L HKDWLSP EV KIF  L  P SV+P+ D +SKRKD+KPNE+L+T+++ KL +A+ 
Sbjct: 41  LKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARM 100

Query: 110 FAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTF 169
           F AI+D++K +K  K C +SD FFYNVIKVYGN+ G   R +ETL+DMP+++CWPS KTF
Sbjct: 101 FDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTF 160

Query: 170 NFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPK 229
           N VLN LV +K+FD++++V+ GA +LGVEIDAC LNIL+KGLC+ G ++ A ++LDE+PK
Sbjct: 161 NLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPK 220

Query: 230 QKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEE 289
           Q+C+PN  TFST+MH +CE G V+ A GL++RME+E V PD V FNIL+SGL+K+GR+EE
Sbjct: 221 QRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEE 280

Query: 290 SMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVL 349
            MELL RM+L GC PN G+YQE+LYG+L + R+  AK+F+  M  + + PSF+SYK+++ 
Sbjct: 281 GMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIY 340

Query: 350 GLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 401
           GLC+EN++ DV W+LK MV  GFVP   MWR +++  FP    VS +EI+E+
Sbjct: 341 GLCKENLVADVVWILKQMVEQGFVPERWMWRRILQTMFPR--NVSQSEIMEE 390

BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Match: A0A067L951_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22350 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.600e-117
Identity = 213/390 (54.62%), Postives = 290/390 (74.36%), Query Frame = 1

		  

Query: 21  QLFNQRLIHKHASSTPLSSSCSSDQSCSSIQ--------KLFHKDWLSPNEVAKIFTTL- 80
           Q  ++R +H   S  P   SCS+  S S           KL HKDWLSPNEV KIF  + 
Sbjct: 17  QAHSRRTVHHPISIFPSFFSCSTLPSSSQSTQHPPHTHYKLNHKDWLSPNEVLKIFEDIK 76

Query: 81  EPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEF 140
           +P+SV+ I++  SKRKDYKPNE++FTV++ +L  AKNF AI++I++ IK +K+C +S++F
Sbjct: 77  DPDSVISIWNQYSKRKDYKPNEAIFTVVINQLACAKNFDAIEEIMERIKFEKSCRLSNDF 136

Query: 141 FYNVIKVYGNLGGLNKRVIETLYDMPE-YNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLG 200
           FYNVIK+YG+L GL K+ IETL DMP+ YNCWP+ KTFN VLN LV +K F +++E+++ 
Sbjct: 137 FYNVIKIYGHLAGLIKKSIETLLDMPKGYNCWPNVKTFNLVLNMLVSAKLFYVVHEIYVK 196

Query: 201 ATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGM 260
           A  LGVEIDAC LNILIKGLC+ G L+ A+ VLDEFPKQ+C+PN  TFST+MH  C KG 
Sbjct: 197 APMLGVEIDACCLNILIKGLCENGDLQFAFNVLDEFPKQRCRPNVRTFSTLMHYFCAKGE 256

Query: 261 VDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQE 320
           V++AFGL++RME E +  D +TFNIL+SGL+KQGRIE+ MELL +M+L GCEPN G+YQE
Sbjct: 257 VNKAFGLLERMENEGIEADTITFNILISGLRKQGRIEDGMELLQKMKLKGCEPNAGSYQE 316

Query: 321 ILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVG 380
           +LYGLL + ++++AK+F+ MM  +A  PSF SYK L+ GLC + ++R+V+ VLK MV  G
Sbjct: 317 VLYGLLDAGKFLEAKEFMAMMICEANSPSFASYKKLIHGLCNDKLIREVELVLKQMVKQG 376

Query: 381 FVPRMGMWRSVVKKNFPN--APEVSLNEIL 399
           FVP+MGMWR +++  F    A  + ++EI+
Sbjct: 377 FVPKMGMWREILRSLFSRTAASNICISEIV 406

BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Match: A5AVV9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028261 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.000e-117
Identity = 196/352 (55.68%), Postives = 272/352 (77.27%), Query Frame = 1

		  

Query: 50  IQKLFHKDWLSPNEVAKIFTTLE-PNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKN 109
           +++L HKDWLSP EV KIF  L  P SV+P+ D + KRKD+KPNE+L+T+++ KL +A+ 
Sbjct: 41  LKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVCKRKDFKPNEALYTLVINKLAQARM 100

Query: 110 FAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTF 169
           F AI+D++K +K  K C +SD FFYNVIKVYGN+ G   R +ETL+DMP+++CWPS KTF
Sbjct: 101 FDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTF 160

Query: 170 NFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPK 229
           N VLN LV +K+FD++++V+ GA +LGVEIDAC LNIL+KGLC+ G ++ A ++LDE+PK
Sbjct: 161 NLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPK 220

Query: 230 QKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEE 289
           Q+C+PN  TFST+MH +CE G V+ A GL++RME+E V PD V FNIL+SGL+K+GR+EE
Sbjct: 221 QRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEE 280

Query: 290 SMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVL 349
            MELL RM+L GC PN G+YQE+LYG+L + R+  AK+F+  M  + + PSF+SYK+++ 
Sbjct: 281 GMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIY 340

Query: 350 GLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVVKKNFPNAPEVSLNEILED 401
           GLC+EN++ DV W+LK MV  GFVP   MWR +++  FP    VS +EI+E+
Sbjct: 341 GLCKENLVADVVWILKQMVEQGFVPERWMWRRILQTMFPR--NVSQSEIMEE 390

BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.000e-113
Identity = 195/362 (53.87%), Postives = 268/362 (74.03%), Query Frame = 1

		  

Query: 32  ASSTPLSSSCSSDQSCSSIQK---------LFHKDWLSPNEVAKIFTTL-EPNSVLPIFD 91
           +S   + SS SSD+  SS Q+         L HKDWL+PNEV KIF  + +P+ +LP + 
Sbjct: 24  SSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQ 83

Query: 92  HISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGN 151
           H SKRKDY+P ESL+ +++ K G+AK +  I+++++ IK +K C  S+EFFYN++++YGN
Sbjct: 84  HYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGN 143

Query: 152 LGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDAC 211
           L G   R IE L+ MP++ CWPS+K+FNF+LN LV +K FD I+++F+ A KLGVEIDAC
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203

Query: 212 TLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRM 271
            LNILIKGLC+ G LE A Q+LDEFP+QK +PN MTFS ++   C KG  +EAF L++RM
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263

Query: 272 EKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRY 331
           EKER+ PD +TFNIL+SGL+K+GR+EE ++LL+RM++ GCEPN GTYQE+LYGLL  KR 
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323

Query: 332 VDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSV 384
           ++AK+ +  M    + PSFLSYK +VLGLCE   + ++DWVL+ MV+ GFVP+  MW  V
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKV 383

BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.300e-37
Identity = 91/331 (27.49%), Postives = 173/331 (52.27%), Query Frame = 1

		  

Query: 59  LSPNEVAKIFTT-LEPNSVLPIFDHISKR--KDYKPNESLFTVIVAKLGEAKNFAAIDDI 118
           ++P++V K+     +    + +FD  +      Y  ++S F  +V +L  A  F A +D+
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 119 LKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETL---YDMPEYNCWPSTKTFNFVL 178
           +  +K + NC +S++   ++ + YG +     R  ++L   + M +++C PS K +  VL
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRV----HRPFDSLRVFHKMKDFDCDPSQKAYVTVL 133

Query: 179 NYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKC-GRLEDAYQVLDEFPKQKC 238
             LV   Q ++ ++ +    ++G+     +LN+LIK LC+  G ++   ++  E PK+ C
Sbjct: 134 AILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC 193

Query: 239 KPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESME 298
            P+  T+ T++  +C  G +DEA  L   M ++  +P  VT+  L++GL     ++E+M 
Sbjct: 194 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 253

Query: 299 LLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLC 358
            L+ M+  G EPN  TY  ++ GL K  R + A +   MM  +   P+ ++Y  L+ GLC
Sbjct: 254 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 313

Query: 359 EENMLRDVDWVLKSMVSVGFVPRMGMWRSVV 383
           +E  +++   +L  M   G  P  G++  V+
Sbjct: 314 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339

BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 5.600e-36
Identity = 92/326 (28.22%), Postives = 170/326 (52.15%), Query Frame = 1

		  

Query: 60  SPNEVAKIFTTL-EPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKM 119
           SP  V K+  +  +P     IFD+ S++ +++ + S   +++ KLG  + F  IDD+L  
Sbjct: 50  SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAK 109

Query: 120 IKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCS 179
            ++     ++ E F  +IKVY     L ++V+ T Y M E+N  P  K  N +L+ LV  
Sbjct: 110 HRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 169

Query: 180 KQF-DMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMT 239
           + +    +E+F  +   GV  +  + N+L++  C    L  AYQ+  +  ++   P+  +
Sbjct: 170 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 229

Query: 240 FSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMR 299
           +  ++   C KG V+ A  L+  M  +   PD +++  L++ L ++ ++ E+ +LL RM+
Sbjct: 230 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 289

Query: 300 LMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLR 359
           L GC P+   Y  ++ G  +  R +DA+K +  M      P+ +SY+ L+ GLC++ M  
Sbjct: 290 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 349

Query: 360 DVDWVLKSMVSVGFVPRMGMWRSVVK 384
           +    L+ M+S GF P   +   +VK
Sbjct: 350 EGKKYLEEMISKGFSPHFSVSNCLVK 373

BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.800e-32
Identity = 90/359 (25.07%), Postives = 178/359 (49.58%), Query Frame = 1

		  

Query: 24  NQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLSPNEVAKIFTTLEPNSVLPIFDHI 83
           +QR  H      P   + S + +     K   K W     +  +    +P   L +F H 
Sbjct: 17  SQRHYHTSRPEKPTKKASSHEPT----HKFTRKPWEEVPFLTDLKEIEDPEEALSLF-HQ 76

Query: 84  SKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLG 143
            +   ++ +   ++ ++ KL +++NF A+D IL++++  +N    +  F  +I+ YG  G
Sbjct: 77  YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVR-YRNVRCRESLFMGLIQHYGKAG 136

Query: 144 GLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTL 203
            ++K  I+  + +  ++C  + ++ N ++N LV + + +     F GA  + +  ++ + 
Sbjct: 137 SVDK-AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 196

Query: 204 NILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEK 263
           NILIKG       E A +V DE  + + +P+ +T+++++  +C    + +A  L++ M K
Sbjct: 197 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 256

Query: 264 ERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVD 323
           +R+ P+AVTF +L+ GL  +G   E+ +L+  M   GC+P    Y  ++  L K  R  +
Sbjct: 257 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 316

Query: 324 AKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVV 383
           AK  +  M+ + + P  + Y +LV  LC E  + +   VL  M   G  P    +R ++
Sbjct: 317 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.200e-30
Identity = 88/314 (28.03%), Postives = 149/314 (47.45%), Query Frame = 1

		  

Query: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120
           P+   K+F   +P S  P       ++ ++ +   + +I+ KLG +K F  +D +L  +K
Sbjct: 22  PSAAMKLFRNPDPESTNP-------KRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 81

Query: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180
           T      ++  F NVI  +G  G L  R +    +MP+Y C  + K+ N +L+ L+   +
Sbjct: 82  TDTRIVPTEIIFCNVINFFGR-GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE 141

Query: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240
            + + E      + G + DACT NILI G  + G  +DA ++ DE  K+K KP  +TF T
Sbjct: 142 LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 201

Query: 241 IMHCMCEKGMVDEAFGLIKRMEK-ERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLM 300
           ++H +C+   V EA  +   M K   V P    +  L+  L + G +  + +L D     
Sbjct: 202 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 261

Query: 301 GCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDV 360
             + +   Y  ++  L+K+ R  +    +  M  K   P  ++Y +L+ G C EN     
Sbjct: 262 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 321

Query: 361 DWVLKSMVSVGFVP 374
           + VL  MV  G  P
Sbjct: 322 NRVLDEMVEKGLKP 326

BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Match: AT3G14580.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 410.6 bits (1054), Expect = 1.100e-114
Identity = 195/362 (53.87%), Postives = 268/362 (74.03%), Query Frame = 1

		  

Query: 32  ASSTPLSSSCSSDQSCSSIQK---------LFHKDWLSPNEVAKIFTTL-EPNSVLPIFD 91
           +S   + SS SSD+  SS Q+         L HKDWL+PNEV KIF  + +P+ +LP + 
Sbjct: 24  SSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQ 83

Query: 92  HISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGN 151
           H SKRKDY+P ESL+ +++ K G+AK +  I+++++ IK +K C  S+EFFYN++++YGN
Sbjct: 84  HYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGN 143

Query: 152 LGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDAC 211
           L G   R IE L+ MP++ CWPS+K+FNF+LN LV +K FD I+++F+ A KLGVEIDAC
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203

Query: 212 TLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRM 271
            LNILIKGLC+ G LE A Q+LDEFP+QK +PN MTFS ++   C KG  +EAF L++RM
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263

Query: 272 EKERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRY 331
           EKER+ PD +TFNIL+SGL+K+GR+EE ++LL+RM++ GCEPN GTYQE+LYGLL  KR 
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323

Query: 332 VDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSV 384
           ++AK+ +  M    + PSFLSYK +VLGLCE   + ++DWVL+ MV+ GFVP+  MW  V
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKV 383

BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.300e-38
Identity = 91/331 (27.49%), Postives = 173/331 (52.27%), Query Frame = 1

		  

Query: 59  LSPNEVAKIFTT-LEPNSVLPIFDHISKR--KDYKPNESLFTVIVAKLGEAKNFAAIDDI 118
           ++P++V K+     +    + +FD  +      Y  ++S F  +V +L  A  F A +D+
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 119 LKMIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETL---YDMPEYNCWPSTKTFNFVL 178
           +  +K + NC +S++   ++ + YG +     R  ++L   + M +++C PS K +  VL
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRV----HRPFDSLRVFHKMKDFDCDPSQKAYVTVL 133

Query: 179 NYLVCSKQFDMIYEVFLGATKLGVEIDACTLNILIKGLCKC-GRLEDAYQVLDEFPKQKC 238
             LV   Q ++ ++ +    ++G+     +LN+LIK LC+  G ++   ++  E PK+ C
Sbjct: 134 AILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC 193

Query: 239 KPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESME 298
            P+  T+ T++  +C  G +DEA  L   M ++  +P  VT+  L++GL     ++E+M 
Sbjct: 194 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 253

Query: 299 LLDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLC 358
            L+ M+  G EPN  TY  ++ GL K  R + A +   MM  +   P+ ++Y  L+ GLC
Sbjct: 254 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 313

Query: 359 EENMLRDVDWVLKSMVSVGFVPRMGMWRSVV 383
           +E  +++   +L  M   G  P  G++  V+
Sbjct: 314 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339

BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 2.100e-33
Identity = 90/359 (25.07%), Postives = 178/359 (49.58%), Query Frame = 1

		  

Query: 24  NQRLIHKHASSTPLSSSCSSDQSCSSIQKLFHKDWLSPNEVAKIFTTLEPNSVLPIFDHI 83
           +QR  H      P   + S + +     K   K W     +  +    +P   L +F H 
Sbjct: 17  SQRHYHTSRPEKPTKKASSHEPT----HKFTRKPWEEVPFLTDLKEIEDPEEALSLF-HQ 76

Query: 84  SKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIKTQKNCHISDEFFYNVIKVYGNLG 143
            +   ++ +   ++ ++ KL +++NF A+D IL++++  +N    +  F  +I+ YG  G
Sbjct: 77  YQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVR-YRNVRCRESLFMGLIQHYGKAG 136

Query: 144 GLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQFDMIYEVFLGATKLGVEIDACTL 203
            ++K  I+  + +  ++C  + ++ N ++N LV + + +     F GA  + +  ++ + 
Sbjct: 137 SVDK-AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 196

Query: 204 NILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFSTIMHCMCEKGMVDEAFGLIKRMEK 263
           NILIKG       E A +V DE  + + +P+ +T+++++  +C    + +A  L++ M K
Sbjct: 197 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 256

Query: 264 ERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLMGCEPNKGTYQEILYGLLKSKRYVD 323
           +R+ P+AVTF +L+ GL  +G   E+ +L+  M   GC+P    Y  ++  L K  R  +
Sbjct: 257 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 316

Query: 324 AKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDVDWVLKSMVSVGFVPRMGMWRSVV 383
           AK  +  M+ + + P  + Y +LV  LC E  + +   VL  M   G  P    +R ++
Sbjct: 317 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 6.800e-32
Identity = 88/314 (28.03%), Postives = 149/314 (47.45%), Query Frame = 1

		  

Query: 61  PNEVAKIFTTLEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILKMIK 120
           P+   K+F   +P S  P       ++ ++ +   + +I+ KLG +K F  +D +L  +K
Sbjct: 22  PSAAMKLFRNPDPESTNP-------KRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLK 81

Query: 121 TQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDMPEYNCWPSTKTFNFVLNYLVCSKQ 180
           T      ++  F NVI  +G  G L  R +    +MP+Y C  + K+ N +L+ L+   +
Sbjct: 82  TDTRIVPTEIIFCNVINFFGR-GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE 141

Query: 181 FDMIYEVFLGATKLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCKPNKMTFST 240
            + + E      + G + DACT NILI G  + G  +DA ++ DE  K+K KP  +TF T
Sbjct: 142 LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 201

Query: 241 IMHCMCEKGMVDEAFGLIKRMEK-ERVSPDAVTFNILVSGLQKQGRIEESMELLDRMRLM 300
           ++H +C+   V EA  +   M K   V P    +  L+  L + G +  + +L D     
Sbjct: 202 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 261

Query: 301 GCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCEENMLRDV 360
             + +   Y  ++  L+K+ R  +    +  M  K   P  ++Y +L+ G C EN     
Sbjct: 262 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 321

Query: 361 DWVLKSMVSVGFVP 374
           + VL  MV  G  P
Sbjct: 322 NRVLDEMVEKGLKP 326

BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 1.200e-31
Identity = 86/319 (26.96%), Postives = 158/319 (49.53%), Query Frame = 1

		  

Query: 59  LSPNEVAKIFTT-LEPNSVLPIFDHISKRKDYKPNESLFTVIVAKLGEAKNFAAIDDILK 118
           +SPN   ++    LE      +F    K   +K  +S  + ++     + +F +++ +L 
Sbjct: 42  VSPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLS 101

Query: 119 MIKTQKNCHISDEFFYNVIKVYGNLGGLNKRVIETLYDM-PEYNCWPSTKTFNFVLNYLV 178
            I+ + N  I +  F  V + YG    L  + ++  + M  E+ C  S K+FN VLN ++
Sbjct: 102 RIRLE-NRVIIERSFIVVFRAYGK-AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVII 161

Query: 179 CSKQFDM---IYEVFLGAT-KLGVEIDACTLNILIKGLCKCGRLEDAYQVLDEFPKQKCK 238
               +      Y+  + +   + +  +  + N++IK LCK   ++ A +V    P++KC 
Sbjct: 162 NEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL 221

Query: 239 PNKMTFSTIMHCMCEKGMVDEAFGLIKRMEKERVSPDAVTFNILVSGLQKQGRIEESMEL 298
           P+  T+ T+M  +C++  +DEA  L+  M+ E  SP  V +N+L+ GL K+G +    +L
Sbjct: 222 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 281

Query: 299 LDRMRLMGCEPNKGTYQEILYGLLKSKRYVDAKKFVHMMRYKALIPSFLSYKLLVLGLCE 358
           +D M L GC PN+ TY  +++GL    +   A   +  M     IP+ ++Y  L+ GL +
Sbjct: 282 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 341

Query: 359 ENMLRDVDWVLKSMVSVGF 372
           +    D   +L SM   G+
Sbjct: 342 QRRATDAVRLLSSMEERGY 358

The following BLAST results are available for this feature:
BLAST of Spo19939.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902206466|gb|KNA15480.1|1.1e-23099.5hypothetical protein SOVF_0979... [more]
gi|731365490|ref|XP_010694554.1|1.9e-16974.0PREDICTED: pentatricopeptide r... [more]
gi|645239806|ref|XP_008226304.1|7.2e-12455.9PREDICTED: pentatricopeptide r... [more]
gi|657988454|ref|XP_008386399.1|1.5e-12158.7PREDICTED: pentatricopeptide r... [more]
gi|694423021|ref|XP_009339331.1|1.5e-12158.7PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo19939.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R7K0_SPIOL8.0e-23199.5Uncharacterized protein OS=Spi... [more]
A0A0J8E508_BETVU1.3e-16974.0Uncharacterized protein OS=Bet... [more]
F6GX44_VITVI4.1e-11855.9Putative uncharacterized prote... [more]
A0A067L951_JATCU1.6e-11754.6Uncharacterized protein OS=Jat... [more]
A5AVV9_VITVI2.0e-11755.6Putative uncharacterized prote... [more]
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BLAST of Spo19939.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP230_ARATH2.0e-11353.8Pentatricopeptide repeat-conta... [more]
PP418_ARATH2.3e-3727.4Pentatricopeptide repeat-conta... [more]
PP298_ARATH5.6e-3628.2Pentatricopeptide repeat-conta... [more]
PPR20_ARATH3.8e-3225.0Pentatricopeptide repeat-conta... [more]
PPR79_ARATH1.2e-3028.0Putative pentatricopeptide rep... [more]
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BLAST of Spo19939.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G14580.11.1e-11453.8Pentatricopeptide repeat (PPR)... [more]
AT5G46100.11.3e-3827.4Pentatricopeptide repeat (PPR)... [more]
AT1G07740.12.1e-3325.0Tetratricopeptide repeat (TPR)... [more]
AT1G53330.16.8e-3228.0Pentatricopeptide repeat (PPR)... [more]
AT4G20090.11.2e-3126.9Pentatricopeptide repeat (PPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 342..371
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 268..316
score: 3.1E-10coord: 199..246
score: 9.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 237..270
score: 1.8E-8coord: 202..234
score: 5.2E-9coord: 271..304
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 234..268
score: 11.575coord: 199..233
score: 12.364coord: 128..163
score: 5.645coord: 164..198
score: 6.259coord: 304..338
score: 8.035coord: 269..303
score: 13.11coord: 339..373
score: 8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 11..382
score: 3.8E
NoneNo IPR availablePANTHERPTHR24015:SF740SUBFAMILY NOT NAMEDcoord: 11..382
score: 3.8E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006979 response to oxidative stress
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0042742 defense response to bacterium
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009409 response to cold
biological_process GO:0035725 sodium ion transmembrane transport
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0006281 DNA repair
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0008152 metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0034622 cellular protein-containing complex assembly
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0016075 rRNA catabolic process
biological_process GO:0015721 bile acid and bile salt transport
biological_process GO:0006412 translation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009451 RNA modification
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0030488 tRNA methylation
biological_process GO:0016556 mRNA modification
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
biological_process GO:0006396 RNA processing
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0033617 mitochondrial respiratory chain complex IV assembly
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009790 embryo development
biological_process GO:0006825 copper ion transport
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0048366 leaf development
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0006230 TMP biosynthetic process
biological_process GO:0016099 monoterpenoid biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009658 chloroplast organization
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006897 endocytosis
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0010048 vernalization response
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016310 phosphorylation
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0048440 carpel development
biological_process GO:0051604 protein maturation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0042793 plastid transcription
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0051607 defense response to virus
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006508 proteolysis
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0015031 protein transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0090351 seedling development
biological_process GO:0006364 rRNA processing
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0010319 stromule
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005634 nucleus
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0004022 alcohol dehydrogenase (NAD) activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0047769 arogenate dehydratase activity
molecular_function GO:0004664 prephenate dehydratase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0019136 deoxynucleoside kinase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0020037 heme binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0004797 thymidine kinase activity
molecular_function GO:0008508 bile acid:sodium symporter activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0017111 nucleoside-triphosphatase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo029640.78Barchart | Table
Spo029220.73Barchart | Table
Spo161840.72Barchart | Table
Spo009210.71Barchart | Table
Spo158410.71Barchart | Table
Spo030570.71Barchart | Table
Spo043770.71Barchart | Table
Spo184780.71Barchart | Table
Spo028160.70Barchart | Table
Spo272910.70Barchart | Table
Spo035240.69Barchart | Table
Spo045800.69Barchart | Table
Spo215010.69Barchart | Table
Spo179870.69Barchart | Table
Spo133740.69Barchart | Table
Spo157660.69Barchart | Table
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