Spo14668.1 (mRNA)

Overview
NameSpo14668.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00601 : 273054 .. 279589 (-)
Sequence length2017
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAAAAAAACACTAGCATCCTACCCTTAAATTCCTTCATGATTTACGGCCCTGCCATTCCTTTTTCGTTGGCCAGCTGTCTTCGTTCTCCCTTCCCTGTCTTCGTCCTCTTGTGTCCTTCTGCTTCCCCTCCTCTGCAATGGCGTTACTTCATCTTCCATACTAATCTTTCTCGATTTTTCCTCTCCATCTTCTATTTATCCTCGTCAAATTTTATCAGCTCCTCTATCTTCTCTCTCTCCTTCGCTTATTTCCTATCAATAATCTCAATATCAACAAACCCTAAATCCCTAATTTTGGGATTTCAATGAACCAGAGGGATCACAAGATTCCAAATAGTGCCTTAAGGTGCCCACCCCTCTTTCTTTTTCTTCGTGTGGCCGATTTCCTTTCCTCGACATGTCGTTGATGCCTCCACCCTCCTCTTCATCGCGGTGGTCCCTCCGCCATCTTCTCTCCTACATATCTTCTTCGTTCTGCTGGTAAATGCGAGTATCCAACTTCATTTTAGTCCAATCTGTAGCTCTCCATCGTCATCTCTGGCAAGGTCTTCAAATAACACCTTCGAGGATTCCAATGCAAAGCCCATATTCAGACAATTAGTTGGCCTTGGAATCTTCCAAGATGTTATTGGAAATCTTGTTGAAAGATGCAACAATGGTGTTATTTGTTGAGAAGTAGGTAATTTTCTTGATTCGCAGAAGCATAAAATTTTCCTTCAATGTTTAATTGGTAGGCTTACTCATTTAGTTGTAGCTGAATCCATAACCCCTATGTACTTTAATGATATTGACTTGCATAATTCGTTCATAGTTGATGTCAATGGGACTTATAGTTGATGTACATGAAGTATTAGCTTATGGATATTTATGTTTATAACCTAATTTTTATTGTTACTTGATTTAAATTGGAATTTTGGCAGGTGTTTGTGAAATATGAGTATACTCCAGAAACATTGCCTAATTTTTGGGTGATCTTGGGGTTTTTAGTTGATTGCTTAAATATATCTCTGCTCTGGAACGCTCAAGCATGATAGAGCTTTATTGTCTAGGCTTCTTTAATAAGAAATTATTTTGCAGTCCAATTTTTAGGATTTTGTTTGGTATTTTGACGATTGTTCATGTAACTTCCTTAAGATAGATGGTTGTATCAATATATCAAACTTCACTCTAAAATAAGAAAAAAGAAAAGATATACATAAGTCTAAAATGAAAATTCGTCAGGCTTGTGACTGTTACAAGCCGAACTCTAACTGATTAATTGCTACCATCATAGATAATTATCCGGAAGAAGGTGTTTATGAAACTCTGGTACCCAAGGACCAACGGAGGTAGAGCTTTGTCTGATCGAGCTCAGGATAAAGTAACCCTGAAGTGCCTGAGACACTGACTTATGAATTAATTTGTGACTTATGTTTAGACCCTTGATATCGTCATCGTATAATACTGATTCAGGCAAGGCTTTTTCCTGAGTAAGAATCATTGTTGTATGTGACAATGTTACAGGTCTTAATGGTTGATTTATGCTTAGGATCTGATTTACTGTCTGCAGAATCATGTTTTTGTTAATTGTTTTTTAAAAGAACTTGCAATCCTCTGCTGCTGATCTAAGTCAAAGATGAAAGCTTTGCAGAATTGCAGTTTCCATTAGATATGGAAGTTGTTTACTTGTTGCTGCATTGAGCAATCATAATAATCAGCTTGTGGTTTATTTACGAGTCATTTGAATTGTCACTATAATAATTAATCCCTAGAGATTTTCTGTAGTTTAGTTTTGATGGCTTCTGAATTTTAAATGTCTGCAGTTGTGAATTTTGATTATATTTAATTTGGTTAATCTGGGCATATTGATCGAAATTGTTGATGGGTTGGTAATGAATTGAGCTAATATCGCTCGTTTTATGGAATTGATAGGTTGGTGTTTTAAGATGTAGAGATCAGATTCGAAGATGTTGGTTATCACAAACCAAACTGGATAGGCAAGCAAAAGGATTATGCCTACAGTGTTGGATGCCCCGTTAGCCCTTGTGAAGGAATTCCTAAACCCTCCTGATGCTCGGATGTGTTCTCGGTTCAGCTTTAATTAGTTTAATTTTACAGTGTACCCCTTGTAACGAGGGGGGGGTGATATTTTGTTCTAAGAATTACTGGTGTCAAACTGTTAGCATTACTATATTAGATTATTTTTTTCATCTTACAAACAATGTTGACCAAAATTAGGGTTTCATTATTACATTATCGAATTATTGGTTTTCATTTCATCTCTGTTTTTTTCTCAATCTAAACGTAGGATGAAGTGAACACGGCCTTGTTTTCCTTTCGTTTTAATCAGTTTGAATTGGTTTTTTTTTTTGCAGTTCCAGCTTCATGGGAGGGACAGATGATTCAGCCTTTACTTGGTTACGAGAAGAGATGAGATGTAAGTTGGATCTGCTAAATCCTATATTTTTCAAAAAGAAAGAGATGCACCCCTGTATCTGTATTTTCCATTTTTAGTTTGCTAGCTTCATGTTGTAGGCCTGTGTTGGGAACTTATTGTGGCCGTTGTTTCCTCAAACACATCTTCTGTATACAGCCACATACTTTTGGTTAGTTATGTAACCTACAATGTGTTTCACTATGCATAATGGAATGAAGTTTGTTTGAGCATTTTATACTGGTGTCCCTCCTTTTTTTAGTTCCTACATGCCCTTGTATTGCTCATTTCCCCAAAGATCCTGGGGTTTTTGTTTACCTTCCGCTATTTAAAACTTGGAAATATGTTGGTGAATTCCATGTTAGATTACAGTGAATATGTTTTAGTACAGTTGGTTGAGCAGTCTGGACTCTTAGAAGTTATTGGATTCTTCTGCAGATACAAGCTACTCAATTGCCCCAATATCCTATTGCCTCAGGTATGAGTATGATTCTTCTTGGCTGCAACTTTTTCTAAATGCATACAAATCAAGTATGTAGACTTAAGTGAATCCCTGGTGCATAGAATTATGCTCTACACCAACTATGGCATCTTAGGTGAATCCAGAAACTCAAACGCACTTGGACACTAATTCTAATCTGCTGTAAGATTTAATGAATTTAACAATGTACTTAACTCTTACGTAAAGTTGCAGTAAGGTTTTGAGAATATACTTTGTTTTGGAAGTTTCTCAAGACCTTATATTTGTCTCATTAACATTGGCTTCTTTTTAATTAATGGGTTGATATCTTAATTTTAAGTTTCAACCGTTTAAGTGTGACTAATGCTCTGCAATGTTAGGGTTATCATTTGGTGTGCTCACCAATGCGGGATTTCTTGGACTGATTCTTGCATTTGGGATGCCTGTAAATTTGTTTACAAATTTACATTGGGGTTATTTATAATATGTATACATATATTTCTTTTGACCTGTAGTCATGTTTATCCAAGAAGTTTGTAACTGGGTCGGAGATTGAAGTATACAACATTAAGTGTTGTTCTTCAGGGTTTATTAAAACCCGACTTTCTTCGCTTCTATTTGTGAGTTGATTTCTGAAACCATCTTGCTCGTTTTATGCTCTCCTTTTCAGTTTATAAATATCCATGTACTCTGAAATTTGTTTATTAGCTCCTTTTTGGATGCATGAAGCAGGTGGTGCAACCCTCCCCTTCAGCTCATGTAGTAACGAGCAAAACTTCCCATTCTGGTCCTTCAGCGACAGGTATTGTGTCCATACTTATGATCAAATCTAAGCTTCCCCCACAATCTGACTGCATCAACACTTGATACTCTTCAGTTAATACATGATAGAACCGAAAAATGATGAAACGTGTGCTTTCACCAATTAAAAAAGTTGTTATCCTCTTAAGGCATCTTTTTGTTAGATGGAAAATAACTCAGGTTTGTCTTTTGAAAAAAGGAAATAAAAGAATTTGTGATCTTTTAATACACCTGTGAGGAGAAGAAATGATAAGATTCAATATATACACAAAATGAGCAACATTGCATCTGACAGGACTGTAATAGCATGGTCTGAAATGACTTTATTGAATGAGTGTTGCAGATCCCTACTCGCCTGTTGTGTTGCAGAACCCTACCCGCACTTTCTGAATTGGTGTTATTCATTTTCCCTGGTCAGTGGTCCATCTATTAGACTTGATGGGTAACTAGCTATGCTTGTTGTGTGTCTATGATGTTCCTCTCTTATGTATTGCTTCTAATAGATGTTTGTTCTCCATGGCCAACCATCAGTTGTATCGAGCCGGAGTAAACAGTTGAGAATGACTCAAGCCTTGTCACACAGTTCAGCCCATAGGTCATATAGTTTTCAAAACTTCCATTTATTAGTGCAAAATACAAATATCCTTAATAAACAAGACTACTGACATACCTTTTCAAACAATTCATCAAGCCATGAGAGTTTGGTAAAAAGGGGAGTACTTGTTTGATCTAGAAAAGGTGTATCTGTTTGAATGCTATGATTCACTTTTATATGAACTCCAGTCTATTTCCTCTTCTTCATTGTAATAAGACTTGGGAGGGCTTTGAAATTGGCGCTTATCTGGCTCTTGATCAACAACTCGTCCTTCTTCTTTCTGCTTGGAATTTGCAACATTGTCCTACAATTCCACCAACATGCCAAAAAGAGTAAGAACAACTCAAGTGGAAGAACATGTAAGATGCAATGTATGTAAAACTGAAACATGGTACACTACATACACGAGTGTTAAGAACTTCCTTTGGCCTTTCTTCCTCACCTATTATGCAAACTGAATCATCCTTATCCATCTTTGCATCTTGTGCAGCTTGTTCTTCCAGCCTCTTTATTACCAGCTCAAAATGTGAAAGATCTGCAGGCAAAATGGATTTCAAACCATCAGTGAGCTGAGATCAGATCAACAAGGAGCACACAAATTGACAAGGTCCGGGTTTTCTACTGTTGCCTTCTGTAACCTTTTTCTTGCACAATTTGACACACACTATTATCAAAATTCGCCTCTACTTTCCTTCTCTTAGACAAGGTACACCAATTTAATTTGGACATACAAAAGTAGGCAGCAAATTCTCAGAACTAGAGCCCAAGGAGTCAGAATCTATGTGCTGAAACAATTTCATGGAGTGTACAGAGAAATAGGTGCTTTAAATCCACACAAGAATCCTCCACTCTACTAAAGTCCTCTCCCAACGGGAAAACAATATAAATAGAGTTAACTAGAAGAAACATTTGAACTCTGACATATCCAAGGTACAAGAATTCTTAAGTGGAAAAATATCCCGTAATAGCATCTTTACACCTTTTCAGTGTATGTGTTTGAATGCTATAATCTAAAAAGGATATATATATATATATATATATATATATATATATATATATATATATATGTATCTGTTAATGGCTTGAGAAGTGGCAGAATACGCACACTCATATAAACTGAGCACGCACAATTATACTTCGTATAAAGTAGATCGTTTAGATAAAATTCTGATTACTCCCCTTTTCTGTAATATCGCTTGTAAAATTATATTTCCTATGTTCTTTTTTAAAAATGACACAATTATTTAGCCGCGTTTGTCAATGGACGGTTTAAAACATTAATATCTCTCATTATGGATATGAAAAAATTATAAAAACTTGATATTCAAAAATATTTATGAAGACGAAACTAATAAGGCCCAACGATCATGTTTTTTCTTAAGTATAAATCACAAAAAGAAGTCAAATAAGCTTGTATGAATAGTGTCAAAAACCCATTGTGTCGTGTAAATGAGAACGGAGGAAGTATTACATTGCTTAAGAATGGAAAATATCATACAATTTTCACCCTTCAATACAAATCAGACATAGCTACAAAAATATCCATATAGACACATGCATTGATATAAACACATCCATAGATAGAAATCATTAGACGTTCTTGATGCTAGATTTTAAGCCTTTGTGACTTGAGCAGTTATGTAAAGTATTAACACTCGAGTATATTAGAGGTAAGATTTGAGCAACCCTACAACAGAATATCACTGTTGTTATTTAATTGGCAACTCAATTTTATATTCGTAACATTTACAGAATGATGAAAAAGAAATCACGACCGTGAACTCGTGAAGGAGATGCTACGTACCAAACATGTATCGGTCGAGGTAGGCCCAACAACTACAAGGAGGTGGCACTGGAGGATAACGTCGATAAGGCTTTGGAGGTTGCGGTCGAGAAGTGATCTTGATCAGTTTCAGCAATGTCTCGCTTTTATATGTGTAAAAGTTATTACAATAAGTATGTGTGAAAGCTAATTAGTACCAAAACTATGTATGATGGCGATATGCATGTATGCCTTTTGCAAGCATACCTTGTTTATATTGCATTTCTTAGTATTGTGAACTACCTTATGTGGTAGAGTTTTTTTTACGAGGAACAGGGAAGACCTGAAGTTTCACGTTCCTAGGAAATAATCATTGAACCTTTTGGATCACCTATGTATGAGGCAATCCTATGGAACCTACGTTATGTAAGTAAACTACTTCCTCCGTTCCGTAAATATCACACCATTTTGTTTTTTACATTATTCACACTACGACTTTGG

mRNA sequence

ATAAAAAAAAAACACTAGCATCCTACCCTTAAATTCCTTCATGATTTACGGCCCTGCCATTCCTTTTTCGTTGGCCAGCTGTCTTCGTTCTCCCTTCCCTGTCTTCGTCCTCTTGTGTCCTTCTGCTTCCCCTCCTCTGCAATGGCGTTACTTCATCTTCCATACTAATCTTTCTCGATTTTTCCTCTCCATCTTCTATTTATCCTCGTCAAATTTTATCAGCTCCTCTATCTTCTCTCTCTCCTTCGCTTATTTCCTATCAATAATCTCAATATCAACAAACCCTAAATCCCTAATTTTGGGATTTCAATGAACCAGAGGGATCACAAGATTCCAAATAGTGCCTTAAGGTGCCCACCCCTCTTTCTTTTTCTTCGTGTGGCCGATTTCCTTTCCTCGACATGTCGTTGATGCCTCCACCCTCCTCTTCATCGCGGTGGTCCCTCCGCCATCTTCTCTCCTACATATCTTCTTCGTTCTGCTGGTAAATGCGAGTATCCAACTTCATTTTAGTCCAATCTGTAGCTCTCCATCGTCATCTCTGGCAAGGTCTTCAAATAACACCTTCGAGGATTCCAATGCAAAGCCCATATTCAGACAATTAGTTGGCCTTGGAATCTTCCAAGATGTTATTGGAAATCTTGTTGAAAGATGCAACAATGGTGTTATTTGTTGAGAAGTAGGTTGGTGTTTTAAGATGTAGAGATCAGATTCGAAGATGTTGGTTATCACAAACCAAACTGGATAGGCAAGCAAAAGGATTATGCCTACAGTGTTGGATGCCCCGTTAGCCCTTGTGAAGGAATTCCTAAACCCTCCTGATGCTCGGATGTGTTCTCGGTTCAGCTTTAATTAGTTTAATTTTACAGTGTACCCCTTGTAACGAGGGGGGGGTGATATTTTGTTCTAAGAATTACTGGTGTCAAACTGTTAGCATTACTATATTAGATTATTTTTTTCATCTTACAAACAATGTTGACCAAAATTAGGGTTTCATTATTACATTATCGAATTATTGGTTTTCATTTCATCTCTGTTTTTTTCTCAATCTAAACGTAGGATGAAGTGAACACGGCCTTGTTTTCCTTTCGTTTTAATCAGTTTGAATTGGTTTTTTTTTTTGCAGTTCCAGCTTCATGGGAGGGACAGATGATTCAGCCTTTACTTGGTTACGAGAAGAGATGAGATATACAAGCTACTCAATTGCCCCAATATCCTATTGCCTCAGGACTGTAATAGCATGGTCTGAAATGACTTTATTGAATGAGTGTTGCAGATCCCTACTCGCCTGTTGTGTTGCAGAACCCTACCCGCACTTTCTGAATTGGTGTTATTCATTTTCCCTGATGTTTGTTCTCCATGGCCAACCATCAGTTGTATCGAGCCGGAGTAAACAGTTGAGAATGACTCAAGCCTTGTCACACAGTTCAGCCCATAGTCTATTTCCTCTTCTTCATTGTAATAAGACTTGGGAGGGCTTTGAAATTGGCGCTTATCTGGCTCTTGATCAACAACTCGTCCTTCTTCTTTCTGCTTGGAATTTGCAACATTGTCCTACAATTCCACCAACATGCCAAAAAGAGCAAAATGGATTTCAAACCATCAGTGAGCTGAGATCAGATCAACAAGGAGCACACAAATTGACAAGAATGATGAAAAAGAAATCACGACCGTGAACTCGTGAAGGAGATGCTACGTACCAAACATGTATCGGTCGAGGTAGGCCCAACAACTACAAGGAGGTGGCACTGGAGGATAACGTCGATAAGGCTTTGGAGGTTGCGGTCGAGAAGTGATCTTGATCAGTTTCAGCAATGTCTCGCTTTTATATGTGTAAAAGTTATTACAATAAGGAAGACCTGAAGTTTCACGTTCCTAGGAAATAATCATTGAACCTTTTGGATCACCTATGTATGAGGCAATCCTATGGAACCTACGTTATGTAAGTAAACTACTTCCTCCGTTCCGTAAATATCACACCATTTTGTTTTTTACATTATTCACACTACGACTTTGG

Coding sequence (CDS)

ATGGGAGGGACAGATGATTCAGCCTTTACTTGGTTACGAGAAGAGATGAGATATACAAGCTACTCAATTGCCCCAATATCCTATTGCCTCAGGACTGTAATAGCATGGTCTGAAATGACTTTATTGAATGAGTGTTGCAGATCCCTACTCGCCTGTTGTGTTGCAGAACCCTACCCGCACTTTCTGAATTGGTGTTATTCATTTTCCCTGATGTTTGTTCTCCATGGCCAACCATCAGTTGTATCGAGCCGGAGTAAACAGTTGAGAATGACTCAAGCCTTGTCACACAGTTCAGCCCATAGTCTATTTCCTCTTCTTCATTGTAATAAGACTTGGGAGGGCTTTGAAATTGGCGCTTATCTGGCTCTTGATCAACAACTCGTCCTTCTTCTTTCTGCTTGGAATTTGCAACATTGTCCTACAATTCCACCAACATGCCAAAAAGAGCAAAATGGATTTCAAACCATCAGTGAGCTGAGATCAGATCAACAAGGAGCACACAAATTGACAAGAATGATGAAAAAGAAATCACGACCGTGA

Protein sequence

MGGTDDSAFTWLREEMRYTSYSIAPISYCLRTVIAWSEMTLLNECCRSLLACCVAEPYPHFLNWCYSFSLMFVLHGQPSVVSSRSKQLRMTQALSHSSAHSLFPLLHCNKTWEGFEIGAYLALDQQLVLLLSAWNLQHCPTIPPTCQKEQNGFQTISELRSDQQGAHKLTRMMKKKSRP
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14668Spo14668gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14668.1Spo14668.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14668.1.utr5p.2Spo14668.1.utr5p.2five_prime_UTR
Spo14668.1.utr5p.1Spo14668.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14668.1.CDS.7Spo14668.1.CDS.7CDS
Spo14668.1.CDS.6Spo14668.1.CDS.6CDS
Spo14668.1.CDS.5Spo14668.1.CDS.5CDS
Spo14668.1.CDS.4Spo14668.1.CDS.4CDS
Spo14668.1.CDS.3Spo14668.1.CDS.3CDS
Spo14668.1.CDS.2Spo14668.1.CDS.2CDS
Spo14668.1.CDS.1Spo14668.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14668.1.utr3p.2Spo14668.1.utr3p.2three_prime_UTR
Spo14668.1.utr3p.1Spo14668.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14668.1.exon.9Spo14668.1.exon.9exon
Spo14668.1.exon.8Spo14668.1.exon.8exon
Spo14668.1.exon.7Spo14668.1.exon.7exon
Spo14668.1.exon.6Spo14668.1.exon.6exon
Spo14668.1.exon.5Spo14668.1.exon.5exon
Spo14668.1.exon.4Spo14668.1.exon.4exon
Spo14668.1.exon.3Spo14668.1.exon.3exon
Spo14668.1.exon.2Spo14668.1.exon.2exon
Spo14668.1.exon.1Spo14668.1.exon.1exon


Homology
[Close]
BLAST of Spo14668.1 vs. NCBI nr
Match: gi|902205681|gb|KNA15235.1| (hypothetical protein SOVF_100010 [Spinacia oleracea])

HSP 1 Score: 69.3 bits (168), Expect = 7.600e-9
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 

		  

Query: 1  MGGTDDSAFTWLREEMRYTSYSIAPISYCLR 32
          MGGTDDSAFTWLREEMRYTSYSIAPISYCLR
Sbjct: 1  MGGTDDSAFTWLREEMRYTSYSIAPISYCLR 31
[Close]
BLAST of Spo14668.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6U8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_100010 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.300e-9
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 

		  

Query: 1  MGGTDDSAFTWLREEMRYTSYSIAPISYCLR 32
          MGGTDDSAFTWLREEMRYTSYSIAPISYCLR
Sbjct: 1  MGGTDDSAFTWLREEMRYTSYSIAPISYCLR 31
The following BLAST results are available for this feature:
BLAST of Spo14668.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902205681|gb|KNA15235.1|7.6e-9100.hypothetical protein SOVF_1000... [more]
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BLAST of Spo14668.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9R6U8_SPIOL5.3e-9100.Uncharacterized protein OS=Spi... [more]
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BLAST of Spo14668.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14668.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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