Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAAACCAAGTTAAGTTTGTGTCTGCTGTTTCTTTCAGTATTCCTAACCTCTGCTTTAGCCATCAGTTTCCCTGACCCGTATGAAAACCAGCGTGGTGATCGGAGCGTGTGCGTGCCGCGTTGCGTAAGCCAAGGCCGCGACGTACGCCAGTGTGTAGACGAGTGTCGAGGTCGGGTAGGGGAATGGGGACGGGGACGAGGACGGGAATGGGTGTCGGAAGGTGATGAGGAGTTGATCGATGCAATGATCAACCCATACCATGACCTTGACCGTCAGTATGAGCAGTGTCGTCGTGACTGTCAGAAGGAAGGCAGGCGCGGCCAGAGCACACAATGGCAGTGTCAGAGGAGGTGTCAGGAGAGGTACCAACACGGGGGACGCTACGAGGAGGAGGAGGAGGTGTACGAGAACCCTCAGCGGGACCCGCAAAGGCAGTTCCAGCAGTGTCAGCAGAGATGCCAGAGGCAAGGACAAGGACAGAGAGTGGATTGCGAGCGGAGGTGCGTAGAGGAGGTTCAAAGACAGAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAGGAATATGAGAACCCTCAACGGGACCCACAACGACGCTTCCAACAGTGCCAACAGAGATGCCAGAGGCAAGGACAAGGACAGAGAATGGAGTGCCAGAGGAGGTGCCAGGACGAGTTCCAAAGGCAAAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAGAACCCCCAACGTGACCCACAACGGCAGTTCCAGCAGTGCCAGCAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTCCAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAAAACCCACAACGTGACCCCCAACGACGCTTCCAACAATGCCAACAGAGATGCCAAAGACAAGGACAAGGACAAGGACAGAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTACAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGATGAGGAATCCGAGAACCCCCAGCGGGACCCACAAAGACGCTTCCAGCAATGCCAGCAACGATGCCAGAGGCAAGGACAAAGAGTGGAATGCGAAAGGAGGTGCCAAGAAGAGTTCCAGAGGCAAAGACAAGGCGGACGCTACGAGCAAGATGACGTTGAGGAATTCGAGAACCCCCAACGTGACCCGCAACGACGCTTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCCAAAGAAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGTGAACGAGGCGGACGCTATGAGCAGGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGATTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTAGAATGCCAGAGGCGGTGCCAGGAAGAGTTCCAGAGGCAAAGACAAGGCGGACACTACGAGCAAGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGCTTCCAACAGTGCCAGCAGAGATGCCAGAGGCAAGGACAAAGAGTGGAATGTCAGAGGAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGAGAACGAGGCGGACGATACTCCGAGAGGAGCCCCCGCCCCACTTTATTGGCTTCCTTCTTGGAGCTCACTGGACTGTTCTAA ATGTCGAAAACCAAGTTAAGTTTGTGTCTGCTGTTTCTTTCAGTATTCCTAACCTCTGCTTTAGCCATCAGTTTCCCTGACCCGTATGAAAACCAGCGTGGTGATCGGAGCGTGTGCGTGCCGCGTTGCGTAAGCCAAGGCCGCGACGTACGCCAGTGTGTAGACGAGTGTCGAGGTCGGGTAGGGGAATGGGGACGGGGACGAGGACGGGAATGGGTGTCGGAAGGTGATGAGGAGTTGATCGATGCAATGATCAACCCATACCATGACCTTGACCGTCAGTATGAGCAGTGTCGTCGTGACTGTCAGAAGGAAGGCAGGCGCGGCCAGAGCACACAATGGCAGTGTCAGAGGAGGTGTCAGGAGAGGTACCAACACGGGGGACGCTACGAGGAGGAGGAGGAGGTGTACGAGAACCCTCAGCGGGACCCGCAAAGGCAGTTCCAGCAGTGTCAGCAGAGATGCCAGAGGCAAGGACAAGGACAGAGAGTGGATTGCGAGCGGAGGTGCGTAGAGGAGGTTCAAAGACAGAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAGGAATATGAGAACCCTCAACGGGACCCACAACGACGCTTCCAACAGTGCCAACAGAGATGCCAGAGGCAAGGACAAGGACAGAGAATGGAGTGCCAGAGGAGGTGCCAGGACGAGTTCCAAAGGCAAAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAGAACCCCCAACGTGACCCACAACGGCAGTTCCAGCAGTGCCAGCAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTCCAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAAAACCCACAACGTGACCCCCAACGACGCTTCCAACAATGCCAACAGAGATGCCAAAGACAAGGACAAGGACAAGGACAGAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTACAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGATGAGGAATCCGAGAACCCCCAGCGGGACCCACAAAGACGCTTCCAGCAATGCCAGCAACGATGCCAGAGGCAAGGACAAAGAGTGGAATGCGAAAGGAGGTGCCAAGAAGAGTTCCAGAGGCAAAGACAAGGCGGACGCTACGAGCAAGATGACGTTGAGGAATTCGAGAACCCCCAACGTGACCCGCAACGACGCTTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCCAAAGAAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGTGAACGAGGCGGACGCTATGAGCAGGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGATTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTAGAATGCCAGAGGCGGTGCCAGGAAGAGTTCCAGAGGCAAAGACAAGGCGGACACTACGAGCAAGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGCTTCCAACAGTGCCAGCAGAGATGCCAGAGGCAAGGACAAAGAGTGGAATGTCAGAGGAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGAGAACGAGGCGGACGATACTCCGAGAGGAGCCCCCGCCCCACTTTATTGGCTTCCTTCTTGGAGCTCACTGGACTGTTCTAA ATGTCGAAAACCAAGTTAAGTTTGTGTCTGCTGTTTCTTTCAGTATTCCTAACCTCTGCTTTAGCCATCAGTTTCCCTGACCCGTATGAAAACCAGCGTGGTGATCGGAGCGTGTGCGTGCCGCGTTGCGTAAGCCAAGGCCGCGACGTACGCCAGTGTGTAGACGAGTGTCGAGGTCGGGTAGGGGAATGGGGACGGGGACGAGGACGGGAATGGGTGTCGGAAGGTGATGAGGAGTTGATCGATGCAATGATCAACCCATACCATGACCTTGACCGTCAGTATGAGCAGTGTCGTCGTGACTGTCAGAAGGAAGGCAGGCGCGGCCAGAGCACACAATGGCAGTGTCAGAGGAGGTGTCAGGAGAGGTACCAACACGGGGGACGCTACGAGGAGGAGGAGGAGGTGTACGAGAACCCTCAGCGGGACCCGCAAAGGCAGTTCCAGCAGTGTCAGCAGAGATGCCAGAGGCAAGGACAAGGACAGAGAGTGGATTGCGAGCGGAGGTGCGTAGAGGAGGTTCAAAGACAGAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAGGAATATGAGAACCCTCAACGGGACCCACAACGACGCTTCCAACAGTGCCAACAGAGATGCCAGAGGCAAGGACAAGGACAGAGAATGGAGTGCCAGAGGAGGTGCCAGGACGAGTTCCAAAGGCAAAGACAGGGAGAAAGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAGAACCCCCAACGTGACCCACAACGGCAGTTCCAGCAGTGCCAGCAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTCCAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGAATCTGAAAACCCACAACGTGACCCCCAACGACGCTTCCAACAATGCCAACAGAGATGCCAAAGACAAGGACAAGGACAAGGACAGAGAGTGGAATGCGAGAGGAGGTGCCTAGAAGAGGTACAAAGGCAAAGACAGGGAGAACGAGGCGGGCGTTACGAGCAGGATGACGTTGAGGATGAGGAATCCGAGAACCCCCAGCGGGACCCACAAAGACGCTTCCAGCAATGCCAGCAACGATGCCAGAGGCAAGGACAAAGAGTGGAATGCGAAAGGAGGTGCCAAGAAGAGTTCCAGAGGCAAAGACAAGGCGGACGCTACGAGCAAGATGACGTTGAGGAATTCGAGAACCCCCAACGTGACCCGCAACGACGCTTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTGGAATGCCAAAGAAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGTGAACGAGGCGGACGCTATGAGCAGGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGATTCCAACAGTGTCAACAAAGATGCCAAAGGCAAGGACAAAGAGTAGAATGCCAGAGGCGGTGCCAGGAAGAGTTCCAGAGGCAAAGACAAGGCGGACACTACGAGCAAGATGACGTTGAGGAATCCGAAAACCCACAACGTGACCCGCAACGACGCTTCCAACAGTGCCAGCAGAGATGCCAGAGGCAAGGACAAAGAGTGGAATGTCAGAGGAGGTGCCAGGAAGAGTTCCAAAGGCAAAGACAGGGAGAACGAGGCGGACGATACTCCGAGAGGAGCCCCCGCCCCACTTTATTGGCTTCCTTCTTGGAGCTCACTGGACTGTTCTAA MSKTKLSLCLLFLSVFLTSALAISFPDPYENQRGDRSVCVPRCVSQGRDVRQCVDECRGRVGEWGRGRGREWVSEGDEELIDAMINPYHDLDRQYEQCRRDCQKEGRRGQSTQWQCQRRCQERYQHGGRYEEEEEVYENPQRDPQRQFQQCQQRCQRQGQGQRVDCERRCVEEVQRQRQGERGGRYEQDDVEEEYENPQRDPQRRFQQCQQRCQRQGQGQRMECQRRCQDEFQRQRQGERGGRYEQDDVEESENPQRDPQRQFQQCQQRCQRQGQRVECERRCLEEVQRQRQGERGGRYEQDDVEESENPQRDPQRRFQQCQQRCQRQGQGQGQRVECERRCLEEVQRQRQGERGGRYEQDDVEDEESENPQRDPQRRFQQCQQRCQRQGQRVECERRCQEEFQRQRQGGRYEQDDVEEFENPQRDPQRRFQQCQQRCQRQGQRVECQRRCQEEFQRQRQGERGGRYEQDDVEESENPQRDPQRRFQQCQQRCQRQGQRVECQRRCQEEFQRQRQGGHYEQDDVEESENPQRDPQRRFQQCQQRCQRQGQRVECQRRCQEEFQRQRQGERGGRYSERSPRPTLLASFLELTGLF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12842.1 vs. NCBI nr
Match: gi|870846430|gb|KMS98991.1| (hypothetical protein BVRB_3g065990 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 422.2 bits (1084), Expect = 1.500e-114 Identity = 279/472 (59.11%), Postives = 352/472 (74.58%), Query Frame = 1
BLAST of Spo12842.1 vs. NCBI nr
Match: gi|731363450|ref|XP_010693441.1| (PREDICTED: vicilin-like antimicrobial peptides 2-2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 363.2 bits (931), Expect = 8.500e-97 Identity = 241/419 (57.52%), Postives = 306/419 (73.03%), Query Frame = 1
BLAST of Spo12842.1 vs. NCBI nr
Match: gi|698557844|ref|XP_009771136.1| (PREDICTED: vicilin-like antimicrobial peptides 2-3 [Nicotiana sylvestris]) HSP 1 Score: 186.8 bits (473), Expect = 1.100e-43 Identity = 151/356 (42.42%), Postives = 234/356 (65.73%), Query Frame = 1
BLAST of Spo12842.1 vs. NCBI nr
Match: gi|697173575|ref|XP_009595712.1| (PREDICTED: vicilin-like antimicrobial peptides 2-3 isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 186.0 bits (471), Expect = 1.900e-43 Identity = 149/362 (41.16%), Postives = 248/362 (68.51%), Query Frame = 1
BLAST of Spo12842.1 vs. NCBI nr
Match: gi|697173573|ref|XP_009595711.1| (PREDICTED: vicilin-like antimicrobial peptides 2-3 isoform X1 [Nicotiana tomentosiformis]) HSP 1 Score: 184.9 bits (468), Expect = 4.100e-43 Identity = 147/363 (40.50%), Postives = 249/363 (68.60%), Query Frame = 1
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDL1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065990 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.100e-114 Identity = 279/472 (59.11%), Postives = 352/472 (74.58%), Query Frame = 1
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Match: B3STU4_CARIL (7S vicilin OS=Carya illinoinensis GN=pec2a1a PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.300e-35 Identity = 141/368 (38.32%), Postives = 229/368 (62.23%), Query Frame = 1
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Match: B3STU7_CARIL (7S vicilin (Fragment) OS=Carya illinoinensis GN=pec1a1a1 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.300e-35 Identity = 141/368 (38.32%), Postives = 229/368 (62.23%), Query Frame = 1
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Match: W9RZA0_9ROSA (Vicilin-like antimicrobial peptides 2-1 OS=Morus notabilis GN=L484_002588 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.300e-31 Identity = 170/490 (34.69%), Postives = 260/490 (53.06%), Query Frame = 1
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Match: M5Y3W2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001515mg PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.200e-10 Identity = 117/409 (28.61%), Postives = 201/409 (49.14%), Query Frame = 1
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Match: AMP22_MACIN (Vicilin-like antimicrobial peptides 2-2 OS=Macadamia integrifolia GN=AMP2-2 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.500e-13 Identity = 85/246 (34.55%), Postives = 141/246 (57.32%), Query Frame = 1
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Match: AMP21_MACIN (Vicilin-like antimicrobial peptides 2-1 OS=Macadamia integrifolia GN=AMP2-1 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 8.400e-12 Identity = 82/246 (33.33%), Postives = 138/246 (56.10%), Query Frame = 1
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Match: AMP23_MACIN (Vicilin-like antimicrobial peptides 2-3 (Fragment) OS=Macadamia integrifolia GN=AMP2-3 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.900e-10 Identity = 75/225 (33.33%), Postives = 128/225 (56.89%), Query Frame = 1
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Match: VCLB_GOSHI (Vicilin C72 OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.100e-7 Identity = 60/183 (32.79%), Postives = 101/183 (55.19%), Query Frame = 1
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Match: VCLA_GOSHI (Vicilin GC72-A OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.700e-7 Identity = 61/191 (31.94%), Postives = 105/191 (54.97%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12842.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12842.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12842.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12842.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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