Spo27003.1 (mRNA) | SpinachBase

Overview


Name	Spo27003.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein L34e superfamily protein
Location	chr3 : 24220655 .. 24227756 (+)
Sequence length	1339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCCCTCTCTCAATACCACCACGTATCTCAACATCCCCAAAATTAAAGATTTTAACAAAAATAAAAATAAAAATAAAAACACACACCAGGACACCACCTTCCTTTGGCAACCAAAAAGTCACTCCACCCCCTTCCATTTGTATTTCACTAACATGCGCCATCACCCCATTTTCTCTCTCCTCACCACCATAGCAATGCCTCCTTCTTCCTCTCCTCTCTCCACCAAACCCCGCAAACAATCTTCATCCGCCACCGCCAACCACCACCACTCATCCTCCTCTTCATCCCTCTTCTGCCGCCACCACTCCCCCTCCGCCACCGCAACCCTCGATCTCCTCATCCTAATCCTAGTCCTCATTTCCGGCACCTTCCTTCTCACCTCCTACTTCTCCTACATCTTCAACTCTCTCTCTCTCCTCCTCCCCCCTCTCGTGCTCTCTCACTCCTCTCTCCTCCATCAATTCCCCCTCATCTACCTCCTCGGCTTTCTCCTATCATTCGCCCTCGTTGCCGTCTCCTTCGAGATTTGCTGCTGCGGTGGCTTTGGGTTCGGCTTTCGATCGCGTAAATGCGATAATCCTAAGTGTAAAGGGCTGAAGAAGGCGTTGGAGTTTGATTTGCAGTTGCAGACTGAGGAGTGCTTGAAATCAGGGCCTAATGATATTGATAAATTGCCGTGGAAAGGTGGGAGTGAGACTAATCCTGATTATGAGTGCCTTAGAGCTGAGTTGAGGAAGATGGCGCCGCCAAATGGCCGTGCTGTTCTTCTTTTCCGGGCTAAATGTGGCTGTCCGATTGCTAAATTGGTCGGTTGGGGACCTAAGAAAGGAAGGAAACATAAAAAGTGAGTTGATTGTTTCTTTTCTTTTTATTCAATGGGTTCTGTTTTTGAAAAAATTGGAATCTTTATTAATTAATTAGTCGACTATGAAATAATTTTGGGTTTCTGTTTTTTGATGGATTGAAGTACCTAATGATGGATTGAATAGTGTCCTGATTGATTATAGTTTGATGTATTAGAGTTTCACAATCGAATTTGTATTGGTTTTCGATTGTGCTGTTGTTATACTCCGTATCAGATTAATTTGAATTATCTACTTATGTGAGCTTTGCTATGATTGTAACATCATCTTGAGAATTGTTGAAATCATTGTTACTCCGTTTCAAAATTGATACTTATGCCCTCTGTTGATTCTGCATTCATGATTGGCCTTTGCTCTTACTGATTAGTATGCAAAAGTCAGAAGGCTGGTGTTATTAAATGCTTATTGTTTTTAGATTGTGAACAATGTACTGTGTTATTTCGATAGTAACAAGTCTTTAGTTTTCTTCAGTGTTACCTAATCCTCCAATCAGCCCACGAACCGAAAAAGCGAATTATAACATCAAAATGGTATAATTTTGGTCTAATTTAGCAAATTAGGTAGCGAATTGCGAACCCGTACCCGATCTAACAGTGGTTTGCTTTTAAGCTTACTTAGTTCAAATTGATTTGGTGCCCGGTTGAATGTTGTAGTTTCAATTATAGGGTTTAACTTTAGGTATATTGTATTCTTAAAATCCGCCAATCATATTCTTTGGATAGTTATTTTGAGATTTATGTTTCTGTCAAATAAGTATCCAAGTCAAGTGCAAAATTCTCTTCCTGATGCCTTCTTTGTCCAATAATTCAAGAAATGTAGTCTCTTTGTTGTTTAAGCTACTATTTGGCACATCGTTTCCAACAATAGTGCATTTTATTTATTTATTGAGGAGGTTTATGGGTCTACTTGAGGAGGAGTCATGGCGAATTGTCATTTGGCAGAAATGGGGTTTAAGTGAAGTGACTGTTTGGCCTTTAAGGTTTAATGTAATGTGACCTGCCAGCTTTTAGAATGACTTATGGAATCTGGTGACTGAGTGGTGATTTTTTACTGGTTGATTGTGGGTAGTTTATCTATCCTTTACAGTTGATGACCTGAGGTGTCTAAGAAAAACATTTGGTATGGCTATCGGAGAGGACTGCAGATGACAAATGGGGCTTTTGAAACTTGTGAAACATAGCTAAGAGTAAGAGTTTAAATGGTATTCCCCCCGTCCCTAAAAGATTGTCCCAAATGCTTTTGTTCACTATTTAAAGAGTTGGGCAAACTCAAAAGCAAGTGTGTAGGTAGATTTGTCTTTTACCACTATTAAATATTAGTGTGGGTAAAGAGACATGTGAGGACCATAAACGAAATAAAGTATGGGCAAACAAATAGGAACATCCATTTATGGTATACAGAACAATCTTTTAGGGACGGAGGGATTATATCATGGACTAACTAATCAGCACTTGCAGCTTGCAAGTATCCATGGGTAGAAAGGATAACACAATTGACCCTCTTACTTCCTTGCTGTCTATTGAGTAACTTTTGGCTCTAGTCTGTGGAAACCAGGATTGAATATGTAATAATATGTCTGCATTCTGCAGACTTTGCACTCAGTTATACTGCTCCCCTGTTAGCCTCATAGCCTTTGATTTTAGCCTCAATCTTGAAATTGGTTTGCTCTTGTTTTTTTTTTTTTTAATTGTACTTTTGTGGTATTTGCTTCAAGATCACCTGCTGTTCTTCATTCCACCATTCATTACTAATATTAAAAACCTGTCAGGCTGTCATTATCTTACTTTCATTTTCTTTTCTAATCTGGTGATGCTGGGATCATTTTTTTAGCTTTGTGGATATTTGCTTCAAGTTCATCTGCCGTTCTTCATTCCACCATCCACTTAAAAAGAAACTGTCATCATGTCAGTTAATTTTTATTTTATTTTATTTTTGTATATTTTTCCGTTTGCCTCCTAAGATGGTCTTTATATCAACTCTATCAGTGTCTTAGAAAGTCACAAATTGCTGTGACTGCTTTCTCTTCCTGATGGTTGTATCCAGTATTGTAGCCAAAATCCTTGCTGTTAAGAGATGTGCTCTTCTGTTTGCTGTTATTCAACAAGTTCATTGAAATTCTAATATCTCTCTTCTTTATTTTTAGAACTCTAGTGCTATGTTCTATCATGTAATGTTGGATCTTTGGATCTTGCCAATCTATACCTACCAAGACTGTCCTTGCCATCCTTGGTGTAAAGCGAGCAAAAGAGACAGAAAAGGGATCATTTGACATTTTTTGTTGAAAAGCCAATTCTTGTGCGTTTGTATTTATAGCTCCCTATGATGGAATGGTCAAATAGAAATTAAGTTGTGGTAGCTGTCTTTGTGGTACAAGATATCATTTGTGTAATGCCATCTCTATTATCGGTGGTTAGTTAGATAGCCTAACTATTTGTAACTACTTCGTCCCCTTTTGTTGCCCCATAGAGGTGTAGTTACTTTTTTAATTTCTGGTTATGTAAAGTTGATGAAAGAGAAAAGTGGTAGGACCAAATGTAGTGAATATGGGAGTAAAGTGGTGGATCCATATGATCATTTATAGTATGGGGAAAACTCAAAGGGACAACCCAAAAAAGAAGTGGGGTAAACTTTAAGGGAAGGAGGGAGTATTTGTTAAGAAACTGCAAAATGTTGGTGTGCTTGTGGGTCGGAATGAGAGGAAAAGTGGATGGAGCAAGCAAAATATTGGCTGAAGATGTTGGAATTAGCATTTAGAGTTACTGGGGTTAGTAGACTAATAAATTGCATACCATCACCAGGATATGGAGTTGTATTTACAGGGTATGCAGGTGCATGAAGGATTGCTTTCAGCTGCAGTACAATTTTGTTAAACTTAATAAAGAATGGAATTTGCATATCGTCATATATGAGATGAGGCTGGGGGTTCAATGACAACTTTAAGCTCTTGATGATGTATGGATAAAGGTCATGTCTTTTCCAGTTTGCTTCTACACTTAGCATCATAATTCCAGCCTATTTCTGTGTATCATTATACATTTCGGAATAGGCACTGCATGCTCTCTTGATGCCAGGTAATTTGATGCAATTTTTGAACAATATAGTCATCTTTTCCTAACACCAAATTAATTACATATAAAGAAGGTTTTTGGCATTAGAAATTAAGTTTGGAATTTTTATGAAGTTATATGTCATCCCTAGCAAGATATTTGGGGTTCGGGAGAAGGTCTGCTCTTGGAGCGTTTGGGCAAGGTAATGGTAAAAAGGTTTTTCTACTGTGATTTCTGTTGTGCGTGCTTTTTAGGATTATGTTTTTGTTCACAAATATGGTTTGGTAGTGAATTTGGTAATGAATTGGTTTACGGCTTTTTTTAATGGATAAGCTTTGCTGAAGCTGTTGGCCTTTTCATCCAAACGAATTTCATCTGTGCATTGGAGGGAGGATTTGTCATCCAAGATCGTTATACTTACGTGGTTTAGATTCTGTAACTTTTGTGAATCTTGAGACATGTGAGGGTCCATTGTTGTCGTAGAAAATCTGATGCAATTAAAATGATTACAATTGCTTTTTAGAGAACAAACTTACCAGCTAGGGAGGTTTTCTTGTATCAGCTTTAAGAAGAACTTTGTTTCTGGATATCTCATTTGAGCATCGTTATTAAGAAGAACGTGCCTGAAATGATCATTTTTATACTTTTAGGAAAGAACTTACAACTCAGTTAAGTTTTGGGAAAGACTTTTAGCTTTTAAATCTACCTCATCTGTGGAGCACCATTAGGATGAGCCCTTATTTGGAACTGCCTAATGACTAACAGAATTTTGACATGTAACGTGTGGAAGGCCGTGAATTGAAAAAGTTGAATGAGGAGGGAGTTCTGCGTATTTTGTTTCTTTGTCTTAGTTTTTGCGTGCGTGGATGTGCACCTGACGGGTGTGGATGTGTGATTTCAAGTTAGGATTTGGAGGAGGGAGAGCCTTAGCTATTTCTTTATCTAGTTTCTGCTCCTTAGTCTTGGTGTTTGCACACGCATGTGTGTATTTTGTGTGTATCATTCTGACAATTTGACTTAGGATTCCTTATTTATTAGAACTCTTTCTTTCCATGGATACTATTTTGCAGTTTCTGTTGGACGTTGCCCCAGATGAAAGACCTCCTAAAAATTCTTTTAAAACGTAATTGGTGTAAAAAGCTTATTACATGAATCTGTGAGTAAATTACACAATATATTGATTTAAAACTCTCTATTTAGATTTTATGTGTAGGTTTCTGGTCCTCTCTGTTGGTGGGTGGGAAGTTATTCTTTTCTTCCTTTCTGGGTACTCTATCCTTCCTGGGGAATAAGAATATGTTTGTTAACAATCAGTGAAGAAAAAGTTATTATTCTCCTTATGGTTTGTCAAATCAAATACTCACTCCATCCCAAAATGCTTGTTACATCACCTTTGCTCAAAGTTTTAGGTGATAAGTGGTTGTTTGGTTATCAATTATTATTTTATTGAAAAAATTAGATGTGGTAGGAGTTAGGGTGGTATTTTCTTAATTGAATGAAAGAATCTTTGGTAGTGGGAAGTTAAAAACATTAAAATATTGGTGGGGTCATTCCTAATATGGAAGTGTAACAAGTATGTTGGGACATATAAAAAAGGAAAGTGTAACAAGTATTAACTAAATTAGTATGATAAACCTCTTGAATTATCGTTTGGTGTGGCAAACCATCATTAGCCATCAGCTGGTTGAACTGTTAATTAACTAGCTAGTGTAAGGGAAAGTTATATTGGATGTTCAAGGACAACTTTTACCTCGTGTATGATAACACCTGTATAAGGTCATTTATTAAATTGACAATTCAATCGAGTGCTACTTGTCCCGGATATGATCAGAGTTGGCTTGATATCCATAATATGCCACTAGTGCATTGTAAAAACAAAGGTGATTGCTGCTACTTCACATTTTAAGAGGGTGAACTTTGTATTGCCAAAATGTGAACATATTCCCTTTGGTGGAAACCCTTGGAAACTACCACCCCCTTCTTGAATGCGTATGTGATTGCCAAACATGAAGGCCAACAATCATATATTGCTTGATGTTTGCAGCTTGGTAATGATCCGGTAGTCTTATTTTTCACATATGATCCCAAGAATAGTGCATGTGTTTGAATGGCTAAGGAGCAATATGTTGGATTACTGAACAACATTTCCTTTCCTTTCTATAAAGGGATAAATAAAGCATCTCTTACTGTATCAAAGTATTATCACACTCCCATCGCGTGAAAAGAACATTATTAATGTGCTCTTCTGCTGTAATTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNTTTTGCCCCCCTTTTTGTGTTTTTTTTAATAATATTTTATTTACTCTATGTGGATAGTTGATATGTAAAGCAGTAAAGCCTGCATTTGTTTGAACATTCGTGTTACTCGGACTCTTCATAAAGTACCTGAATTAGATATTTTTTACTACTCTGGCATGGGTATATGGACAATCGACACTTTGGACGAAAACCTAGAATTAGATAGTCAAGTCTAGCACTTGGACACATGCCGTTATCCAACACAATAAAGCCCGAGTAACATTTTACTGACTATAAGTTTAAGTGTCCCTCTCTCACACAGTAGCTCAAAAAAATGCAGTTGCAAATTGCTAATGTGTGGTTCATTCCACCTGCAGGGCTTTATCCAATTTGGCAGCTAATGGAGATCATCGCTGATTATGGCTGCAGCCTGCAGATGTGCTGATACAAAGTTGATTTAATCCTTTTGTGCTCCAAAGTCGGCTGATTTTTCCATTTTGATGGAAGTTGGGATGTTTAGAGGACCAAACGTCTGAGGGTAGCCTTCCATCCGAATTGCATTTTCAGTACGATTGTCACTATGTGGAGCTGCAAGGATGAAAGCTGTTTAAAATTTATTCTAATGCTATTCTGGAATTGTATTACCAATTTATTGCCAATAAATAAATGGAACTTTATTCCTATTTAAGTTCTGTTCTCTATTCACTTACCTTAATTTCTGTTCGCTATCACAAATTCTTATTTACAATGGGTGTACAATAAATAGTGTACACCGGAGTAAAAGTTGACTCAAAATGCTTAAAAGTTACATTTATATAGATAAAAGTTATCTATTTTTTAATGATAAATTTTTTCATTTGAATAAAAA

mRNA sequence

TTTCTTCCCTCTCTCAATACCACCACGTATCTCAACATCCCCAAAATTAAAGATTTTAACAAAAATAAAAATAAAAATAAAAACACACACCAGGACACCACCTTCCTTTGGCAACCAAAAAGTCACTCCACCCCCTTCCATTTGTATTTCACTAACATGCGCCATCACCCCATTTTCTCTCTCCTCACCACCATAGCAATGCCTCCTTCTTCCTCTCCTCTCTCCACCAAACCCCGCAAACAATCTTCATCCGCCACCGCCAACCACCACCACTCATCCTCCTCTTCATCCCTCTTCTGCCGCCACCACTCCCCCTCCGCCACCGCAACCCTCGATCTCCTCATCCTAATCCTAGTCCTCATTTCCGGCACCTTCCTTCTCACCTCCTACTTCTCCTACATCTTCAACTCTCTCTCTCTCCTCCTCCCCCCTCTCGTGCTCTCTCACTCCTCTCTCCTCCATCAATTCCCCCTCATCTACCTCCTCGGCTTTCTCCTATCATTCGCCCTCGTTGCCGTCTCCTTCGAGATTTGCTGCTGCGGTGGCTTTGGGTTCGGCTTTCGATCGCGTAAATGCGATAATCCTAAGTGTAAAGGGCTGAAGAAGGCGTTGGAGTTTGATTTGCAGTTGCAGACTGAGGAGTGCTTGAAATCAGGGCCTAATGATATTGATAAATTGCCGTGGAAAGGTGGGAGTGAGACTAATCCTGATTATGAGTGCCTTAGAGCTGAGTTGAGGAAGATGGCGCCGCCAAATGGCCGTGCTGTTCTTCTTTTCCGGGCTAAATGTGGCTGTCCGATTGCTAAATTGGTCGGTTGGGGACCTAAGAAAGGAAGGAAACATAAAAAGGCTTTATCCAATTTGGCAGCTAATGGAGATCATCGCTGATTATGGCTGCAGCCTGCAGATGTGCTGATACAAAGTTGATTTAATCCTTTTGTGCTCCAAAGTCGGCTGATTTTTCCATTTTGATGGAAGTTGGGATGTTTAGAGGACCAAACGTCTGAGGGTAGCCTTCCATCCGAATTGCATTTTCAGTACGATTGTCACTATGTGGAGCTGCAAGGATGAAAGCTGTTTAAAATTTATTCTAATGCTATTCTGGAATTGTATTACCAATTTATTGCCAATAAATAAATGGAACTTTATTCCTATTTAAGTTCTGTTCTCTATTCACTTACCTTAATTTCTGTTCGCTATCACAAATTCTTATTTACAATGGGTGTACAATAAATAGTGTACACCGGAGTAAAAGTTGACTCAAAATGCTTAAAAGTTACATTTATATAGATAAAAGTTATCTATTTTTTAATGATAAATTTTTTCATTTGAATAAAAA

Coding sequence (CDS)

ATGCGCCATCACCCCATTTTCTCTCTCCTCACCACCATAGCAATGCCTCCTTCTTCCTCTCCTCTCTCCACCAAACCCCGCAAACAATCTTCATCCGCCACCGCCAACCACCACCACTCATCCTCCTCTTCATCCCTCTTCTGCCGCCACCACTCCCCCTCCGCCACCGCAACCCTCGATCTCCTCATCCTAATCCTAGTCCTCATTTCCGGCACCTTCCTTCTCACCTCCTACTTCTCCTACATCTTCAACTCTCTCTCTCTCCTCCTCCCCCCTCTCGTGCTCTCTCACTCCTCTCTCCTCCATCAATTCCCCCTCATCTACCTCCTCGGCTTTCTCCTATCATTCGCCCTCGTTGCCGTCTCCTTCGAGATTTGCTGCTGCGGTGGCTTTGGGTTCGGCTTTCGATCGCGTAAATGCGATAATCCTAAGTGTAAAGGGCTGAAGAAGGCGTTGGAGTTTGATTTGCAGTTGCAGACTGAGGAGTGCTTGAAATCAGGGCCTAATGATATTGATAAATTGCCGTGGAAAGGTGGGAGTGAGACTAATCCTGATTATGAGTGCCTTAGAGCTGAGTTGAGGAAGATGGCGCCGCCAAATGGCCGTGCTGTTCTTCTTTTCCGGGCTAAATGTGGCTGTCCGATTGCTAAATTGGTCGGTTGGGGACCTAAGAAAGGAAGGAAACATAAAAAGGCTTTATCCAATTTGGCAGCTAATGGAGATCATCGCTGA

Protein sequence

MRHHPIFSLLTTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo27003	Spo27003	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo27003.1	Spo27003.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27003.1.exon.1	Spo27003.1.exon.1	exon
Spo27003.1.exon.2	Spo27003.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27003.1.utr5p.1	Spo27003.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27003.1.CDS.1	Spo27003.1.CDS.1	CDS
Spo27003.1.CDS.2	Spo27003.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27003.1.utr3p.1	Spo27003.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo27003.1 vs. NCBI nr
Match: gi|902187342|gb|KNA10894.1| (hypothetical protein SOVF_140090 [Spinacia oleracea])

HSP 1 Score: 451.8 bits (1161), Expect = 7.400e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


		  
Query: 15  MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL 74
           MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL
Sbjct: 1   MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL 60

Query: 75  LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG 134
           LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG
Sbjct: 61  LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG 120

Query: 135 FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR 194
           FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR
Sbjct: 121 FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR 180

Query: 195 KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR 244
           KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR
Sbjct: 181 KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR 229

[Close]

BLAST of Spo27003.1 vs. NCBI nr
Match: gi|731364355|ref|XP_010693926.1| (PREDICTED: uncharacterized protein At5g19025 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 315.5 bits (807), Expect = 8.300e-83
Identity = 177/245 (72.24%), Postives = 197/245 (80.41%), Query Frame = 1


		  
Query: 5   PIFSLL---TTIAMPPSSS---PLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATAT 64
           PIFSLL   +T  MPP       LS+KPRK SSS+++    SSSSSSLFCRHHSPSAT+T
Sbjct: 3   PIFSLLPNSSTSMMPPPPHHHHSLSSKPRKSSSSSSS----SSSSSSLFCRHHSPSATST 62

Query: 65  LDLLILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFAL 124
           LDLLILILVL SGTFLLTSYFSYIFNSLSLLL     +H    HQFPL+YL  F L+FAL
Sbjct: 63  LDLLILILVLFSGTFLLTSYFSYIFNSLSLLL-----NHHH--HQFPLLYLFAFFLAFAL 122

Query: 125 VAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKG 184
            A++F    C    FG RSRKC NPKCKGL+KA+EFDLQLQTE+ +K GPN ID LPWKG
Sbjct: 123 -ALAFSFDVCSFHVFGVRSRKCSNPKCKGLRKAMEFDLQLQTEDSIKLGPNFIDSLPWKG 182

Query: 185 GSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAA 244
           G+ETNPDY+CLRAELRKMAPPNGRAVLLFRAKCGCPIAKL+  GPKKGRKHKKALSN+ +
Sbjct: 183 GTETNPDYDCLRAELRKMAPPNGRAVLLFRAKCGCPIAKLLASGPKKGRKHKKALSNVTS 235

[Close]

BLAST of Spo27003.1 vs. NCBI nr
Match: gi|590657519|ref|XP_007034587.1| (Ribosomal protein L34e superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 283.5 bits (724), Expect = 3.500e-73
Identity = 157/242 (64.88%), Postives = 183/242 (75.62%), Query Frame = 1


		  
Query: 9   LLTTIAMPPSSSPLSTKPRKQSSSATA-------NHHHSSSSSSLFCRHHSPSATATLDL 68
           +L  + MPPSS P ST     +++A A       +HHH+S S  L C+H SPSAT  LDL
Sbjct: 1   MLHLLIMPPSSKPTSTTSSTAAAAAAAAKISGHHHHHHNSHSPLLLCKH-SPSAT--LDL 60

Query: 69  LILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAV 128
           LILILVL SG FLL+SYFSY+F+SLSLLL PL+ +HS  L    L YLLG  L FA   +
Sbjct: 61  LILILVLFSGAFLLSSYFSYLFHSLSLLLSPLLSTHSHSLSLPFLSYLLGCTLFFATTLI 120

Query: 129 SFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSE 188
           S E CC      G RSRKC+ P CKGLKKALEFDLQLQTE+C+K+G  +ID LPWKGGSE
Sbjct: 121 SIEFCC------GSRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNGSKEIDCLPWKGGSE 180

Query: 189 TNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGD 244
            NPDYECLRAELRKMAPPNGRAVLLFRA+CGCPIA+L GWGPK+GR+HKKAL+++A NGD
Sbjct: 181 GNPDYECLRAELRKMAPPNGRAVLLFRARCGCPIARLEGWGPKRGRRHKKALASVAQNGD 233

[Close]

BLAST of Spo27003.1 vs. NCBI nr
Match: gi|743933671|ref|XP_011011159.1| (PREDICTED: uncharacterized protein At5g19025 [Populus euphratica])

HSP 1 Score: 279.6 bits (714), Expect = 5.100e-72
Identity = 165/248 (66.53%), Postives = 187/248 (75.40%), Query Frame = 1


		  
Query: 3   HHPIFSLLTTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLL 62
           HH +  LL    MPPSSS L+ KP K SSS TAN + + +S+SL C+H SPSAT  LDLL
Sbjct: 2   HHLL--LLFFFTMPPSSS-LTPKPHKSSSSNTANTNSNPNSTSLLCKH-SPSAT--LDLL 61

Query: 63  ILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSH-----SSLLHQFPLIYLLGFLLSFA 122
           ILILVL SGTFLLTSYFSYIFNSLSLLL    LS      S  LH  P  Y+LGF   F 
Sbjct: 62  ILILVLFSGTFLLTSYFSYIFNSLSLLLSNTSLSRHFPPFSLSLHFPPFSYILGFFSLFI 121

Query: 123 LVAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKS-GPNDIDKLPW 182
           L  + FE CC      G RSRKC  P CKG KKA+EFDLQLQTE+CLKS   ND+DKLPW
Sbjct: 122 LSILFFEFCC------GPRSRKCHQPGCKGFKKAIEFDLQLQTEDCLKSTAANDVDKLPW 181

Query: 183 KGGSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNL 242
           KGG+ +NPDYECLRAELRKMAPPNGRAVLLFR+KCGCP+AKL GWGPK+GR+HK+AL+++
Sbjct: 182 KGGTVSNPDYECLRAELRKMAPPNGRAVLLFRSKCGCPVAKLEGWGPKRGRRHKRALASV 237

Query: 243 AAN-GDHR 244
           AAN GDHR
Sbjct: 242 AANGGDHR 237

[Close]

BLAST of Spo27003.1 vs. NCBI nr
Match: gi|566188919|ref|XP_002314419.2| (hypothetical protein POPTR_0010s03100g [Populus trichocarpa])

HSP 1 Score: 279.3 bits (713), Expect = 6.600e-72
Identity = 164/244 (67.21%), Postives = 187/244 (76.64%), Query Frame = 1


		  
Query: 3   HHPIFSLLTTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLL 62
           HH +  L     MPPSSS  + KP K SSS TAN + + +S+SL C+H SPSAT  LDLL
Sbjct: 2   HHLLLPLFF-FTMPPSSS-FTPKPHKSSSSNTANTNSNPNSTSLLCKH-SPSAT--LDLL 61

Query: 63  ILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSL-LHQFPLIYLLGFLLSFALVAV 122
           ILILVL SGTFLLTSYFSYIFNSLSLLL     S+SSL LH  P  Y+LGF   F L  +
Sbjct: 62  ILILVLFSGTFLLTSYFSYIFNSLSLLL-----SNSSLSLHFPPFSYILGFFSLFILSIL 121

Query: 123 SFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKS-GPNDIDKLPWKGGS 182
            FE CC      G RSRKC  P CKG KKA+EFDLQLQTE+CLKS   ND+DKLPWKGG+
Sbjct: 122 FFEFCC------GPRSRKCHQPGCKGFKKAIEFDLQLQTEDCLKSTAANDVDKLPWKGGT 181

Query: 183 ETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAAN- 242
            +NPDYECLRAELRKMAPPNGRAVLLFR+KCGCP+AKL GWGPK+GR+HK+AL+++AAN 
Sbjct: 182 VSNPDYECLRAELRKMAPPNGRAVLLFRSKCGCPVAKLEGWGPKRGRRHKRALASVAANG 229

Query: 243 GDHR 244
           GDHR
Sbjct: 242 GDHR 229

[Close]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUE7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140090 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 5.200e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


		  
Query: 15  MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL 74
           MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL
Sbjct: 1   MPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLISGTFL 60

Query: 75  LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG 134
           LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG
Sbjct: 61  LTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAVSFEICCCGGFGFG 120

Query: 135 FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR 194
           FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR
Sbjct: 121 FRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYECLRAELR 180

Query: 195 KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR 244
           KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR
Sbjct: 181 KMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGDHR 229

[Close]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBL2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g069360 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.800e-83
Identity = 177/245 (72.24%), Postives = 197/245 (80.41%), Query Frame = 1


		  
Query: 5   PIFSLL---TTIAMPPSSS---PLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATAT 64
           PIFSLL   +T  MPP       LS+KPRK SSS+++    SSSSSSLFCRHHSPSAT+T
Sbjct: 3   PIFSLLPNSSTSMMPPPPHHHHSLSSKPRKSSSSSSS----SSSSSSLFCRHHSPSATST 62

Query: 65  LDLLILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFAL 124
           LDLLILILVL SGTFLLTSYFSYIFNSLSLLL     +H    HQFPL+YL  F L+FAL
Sbjct: 63  LDLLILILVLFSGTFLLTSYFSYIFNSLSLLL-----NHHH--HQFPLLYLFAFFLAFAL 122

Query: 125 VAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKG 184
            A++F    C    FG RSRKC NPKCKGL+KA+EFDLQLQTE+ +K GPN ID LPWKG
Sbjct: 123 -ALAFSFDVCSFHVFGVRSRKCSNPKCKGLRKAMEFDLQLQTEDSIKLGPNFIDSLPWKG 182

Query: 185 GSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAA 244
           G+ETNPDY+CLRAELRKMAPPNGRAVLLFRAKCGCPIAKL+  GPKKGRKHKKALSN+ +
Sbjct: 183 GTETNPDYDCLRAELRKMAPPNGRAVLLFRAKCGCPIAKLLASGPKKGRKHKKALSNVTS 235

[Close]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Match: F6HDL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02590 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.800e-75
Identity = 163/241 (67.63%), Postives = 188/241 (78.01%), Query Frame = 1


		  
Query: 1   MRHHPIFSLLTTI-AMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATL 60
           MRH     LL+TI AMP +SSP S KPRK S +  AN      + SL C+H SPSAT  L
Sbjct: 1   MRH-----LLSTITAMPVTSSP-SPKPRKPSMNPNAN-----PNCSLLCKH-SPSAT--L 60

Query: 61  DLLILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALV 120
           D+LILILVL SGTFL+TSYFSYI  SLSL+LP ++LSHS    + P  Y+LGFL+ FA+ 
Sbjct: 61  DILILILVLFSGTFLITSYFSYIVQSLSLILPSIILSHSLSFRESPGPYILGFLVFFAVF 120

Query: 121 AVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGG 180
            V+ E+CC      G+RSRKCDNP CKGLKKA+EFDLQLQTEECLKS   +ID LPWKGG
Sbjct: 121 IVTIELCC------GYRSRKCDNPGCKGLKKAMEFDLQLQTEECLKSSSKEIDVLPWKGG 180

Query: 181 SETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAAN 240
           SE NPDYECLR+ELRKMAPPNGRAVLLFRA+CGCPIAKL GWGPK+GR+HKKAL++LA N
Sbjct: 181 SEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALN 221

[Close]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Match: A0A061ELE6_THECC (Ribosomal protein L34e superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020498 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.400e-73
Identity = 157/242 (64.88%), Postives = 183/242 (75.62%), Query Frame = 1


		  
Query: 9   LLTTIAMPPSSSPLSTKPRKQSSSATA-------NHHHSSSSSSLFCRHHSPSATATLDL 68
           +L  + MPPSS P ST     +++A A       +HHH+S S  L C+H SPSAT  LDL
Sbjct: 1   MLHLLIMPPSSKPTSTTSSTAAAAAAAAKISGHHHHHHNSHSPLLLCKH-SPSAT--LDL 60

Query: 69  LILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSLLHQFPLIYLLGFLLSFALVAV 128
           LILILVL SG FLL+SYFSY+F+SLSLLL PL+ +HS  L    L YLLG  L FA   +
Sbjct: 61  LILILVLFSGAFLLSSYFSYLFHSLSLLLSPLLSTHSHSLSLPFLSYLLGCTLFFATTLI 120

Query: 129 SFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKGGSE 188
           S E CC      G RSRKC+ P CKGLKKALEFDLQLQTE+C+K+G  +ID LPWKGGSE
Sbjct: 121 SIEFCC------GSRSRKCEKPGCKGLKKALEFDLQLQTEDCVKNGSKEIDCLPWKGGSE 180

Query: 189 TNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANGD 244
            NPDYECLRAELRKMAPPNGRAVLLFRA+CGCPIA+L GWGPK+GR+HKKAL+++A NGD
Sbjct: 181 GNPDYECLRAELRKMAPPNGRAVLLFRARCGCPIARLEGWGPKRGRRHKKALASVAQNGD 233

[Close]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Match: A9PHB0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s03100g PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.600e-72
Identity = 164/244 (67.21%), Postives = 187/244 (76.64%), Query Frame = 1


		  
Query: 3   HHPIFSLLTTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLL 62
           HH +  L     MPPSSS  + KP K SSS TAN + + +S+SL C+H SPSAT  LDLL
Sbjct: 2   HHLLLPLFF-FTMPPSSS-FTPKPHKSSSSNTANTNSNPNSTSLLCKH-SPSAT--LDLL 61

Query: 63  ILILVLISGTFLLTSYFSYIFNSLSLLLPPLVLSHSSL-LHQFPLIYLLGFLLSFALVAV 122
           ILILVL SGTFLLTSYFSYIFNSLSLLL     S+SSL LH  P  Y+LGF   F L  +
Sbjct: 62  ILILVLFSGTFLLTSYFSYIFNSLSLLL-----SNSSLSLHFPPFSYILGFFSLFILSIL 121

Query: 123 SFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKS-GPNDIDKLPWKGGS 182
            FE CC      G RSRKC  P CKG KKA+EFDLQLQTE+CLKS   ND+DKLPWKGG+
Sbjct: 122 FFEFCC------GPRSRKCHQPGCKGFKKAIEFDLQLQTEDCLKSTAANDVDKLPWKGGT 181

Query: 183 ETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAAN- 242
            +NPDYECLRAELRKMAPPNGRAVLLFR+KCGCP+AKL GWGPK+GR+HK+AL+++AAN 
Sbjct: 182 VSNPDYECLRAELRKMAPPNGRAVLLFRSKCGCPVAKLEGWGPKRGRRHKRALASVAANG 229

Query: 243 GDHR 244
           GDHR
Sbjct: 242 GDHR 229

[Close]

BLAST of Spo27003.1 vs. ExPASy Swiss-Prot
Match: Y5902_ARATH (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 229.6 bits (584), Expect = 3.800e-59
Identity = 142/258 (55.04%), Postives = 167/258 (64.73%), Query Frame = 1


		  
Query: 11  TTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLIS 70
           TT A+  +S+   T P    S+A  N     SSSSL    HSPSAT  LDLLILILVL S
Sbjct: 13  TTTAVEDNST---TMPPSSRSAANQN-----SSSSLHLCKHSPSAT--LDLLILILVLFS 72

Query: 71  GTFLLTSYFSYIFNSLSLL---LPPLVLSHSSLLHQF----------------------- 130
           GTFLL+SYFSY+ +SLSLL    P + +S SSLL                          
Sbjct: 73  GTFLLSSYFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIP 132

Query: 131 -PLIYLLGFLLSFALVAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEEC 190
            P  +   F + FA      ++CC      G RSRKC NPKCKG+KKA+EFDLQLQTEEC
Sbjct: 133 PPASFFFAFAVFFAASIAFLDLCC------GSRSRKCRNPKCKGMKKAMEFDLQLQTEEC 192

Query: 191 LKSGP-NDIDKLPWKGGSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWG 241
           +KSG   +ID+LPWKGGSE+NPDYECLRAELRKMAP NGRAVL+FR+KCGCPIAKL GWG
Sbjct: 193 VKSGSVKEIDRLPWKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWG 252

[Close]

BLAST of Spo27003.1 vs. TAIR (Arabidopsis)
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.000e-66
Identity = 149/243 (61.32%), Postives = 171/243 (70.37%), Query Frame = 1


		  
Query: 11  TTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLIS 70
           TT +MPPSSS   +     SSS       SSSSSSL    HSPSAT  LDLLILILVL S
Sbjct: 14  TTNSMPPSSSASRSASNHSSSS-------SSSSSSLHLCKHSPSAT--LDLLILILVLFS 73

Query: 71  GTFLLTSYFSYIFNSLSLL------LPPLVLSHSSLLHQFP-LIYLLGFLLSFALVAVSF 130
           G FLL+SYFSY+F+S SLL      L  L+ S    L   P   Y   F + FA      
Sbjct: 74  GAFLLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFL 133

Query: 131 EICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGP-NDIDKLPWKGGSET 190
           ++CC      G RSRKC NPKCKGLKKA+EFDLQLQTEEC+KSG   +ID+LPWKGGSE+
Sbjct: 134 DLCC------GPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSES 193

Query: 191 NPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKKGRKHKKALSNLAANG-- 244
           NPDYECLRAELR+MAPPNGRAVLLFR++CGCP+AKL GWGPK+GR+HKK+ +NLA  G  
Sbjct: 194 NPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLALKGGV 241

[Close]

BLAST of Spo27003.1 vs. TAIR (Arabidopsis)
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 229.6 bits (584), Expect = 2.100e-60
Identity = 142/258 (55.04%), Postives = 167/258 (64.73%), Query Frame = 1


		  
Query: 11  TTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLFCRHHSPSATATLDLLILILVLIS 70
           TT A+  +S+   T P    S+A  N     SSSSL    HSPSAT  LDLLILILVL S
Sbjct: 13  TTTAVEDNST---TMPPSSRSAANQN-----SSSSLHLCKHSPSAT--LDLLILILVLFS 72

Query: 71  GTFLLTSYFSYIFNSLSLL---LPPLVLSHSSLLHQF----------------------- 130
           GTFLL+SYFSY+ +SLSLL    P + +S SSLL                          
Sbjct: 73  GTFLLSSYFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIP 132

Query: 131 -PLIYLLGFLLSFALVAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEEC 190
            P  +   F + FA      ++CC      G RSRKC NPKCKG+KKA+EFDLQLQTEEC
Sbjct: 133 PPASFFFAFAVFFAASIAFLDLCC------GSRSRKCRNPKCKGMKKAMEFDLQLQTEEC 192

Query: 191 LKSGP-NDIDKLPWKGGSETNPDYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWG 241
           +KSG   +ID+LPWKGGSE+NPDYECLRAELRKMAP NGRAVL+FR+KCGCPIAKL GWG
Sbjct: 193 VKSGSVKEIDRLPWKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWG 252

[Close]

BLAST of Spo27003.1 vs. TAIR (Arabidopsis)
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.000e-22
Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 1


		  
Query: 28  KQSSSATANHHHSSSS-SSLFCRHHSPSATATLDLLILILVLISGTFLLTSYFSY----- 87
           KQS ++++N   SSSS SS F      S +A +D++ILI V+ S  FL+  Y  +     
Sbjct: 28  KQSRTSSSNRKSSSSSCSSNFSVCCDGSRSAAIDVVILIAVITSSGFLIFPYIKFITIKS 87

Query: 88  --IFNSLSLLLPPLVLSHSSLLHQFPLIY-LLGFLLS-FALVAVSFEICCCGGFGFGFRS 147
             IF+ LS L+   +L +       P++Y L+   +S  AL A    I  C         
Sbjct: 88  VEIFSELSCLVKEEILRNPD-----PIVYGLIALSISCTALSAWMIVILLCS-------R 147

Query: 148 RKCDNPKCKGLKKA-LEFDLQLQTEECLKSGPNDIDKLPWKGGSETNPDYEC-LRAELRK 207
            +C  P CKGL+KA  EFD+QL+TE+C+KS  N    +  KG  E   D+   L AEL+K
Sbjct: 148 HRCGKPNCKGLRKANAEFDIQLETEDCVKSS-NSGKSVSKKGLFELPRDHHRELEAELKK 207

Query: 208 MAPPNGRAVLLFRAKCGCPIAKLVGWGPKK 226
           MAPPNGRAVL+FRAKCGC + +L   GPKK
Sbjct: 208 MAPPNGRAVLVFRAKCGCSVGRLEVPGPKK 224

[Close]

BLAST of Spo27003.1 vs. TAIR (Arabidopsis)
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 5.600e-21
Identity = 90/236 (38.14%), Postives = 123/236 (52.12%), Query Frame = 1


		  
Query: 9   LLTTIAMPPSSSPLSTKPRKQSSSATANHHHSSSSSSLF--CRHHSPSATATLDLLILIL 68
           L ++I++  S  P+        S  T N   SS + S F  C     S +A +D++ILI 
Sbjct: 4   LHSSISVCNSVDPMIMSHSSPKSRNTRNKSSSSPTCSKFPVC---DGSQSAAIDVVILIA 63

Query: 69  VLISGTFLLTSYFSYI-------FNSLSLLLPPLVLSHSSLLHQFPLIY-LLGFLLSFAL 128
           V+ +  FL   Y   I       F+ LSLL+   +L       Q P++Y  L   +  A 
Sbjct: 64  VITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEIL-------QNPIVYGSLALSIFCAA 123

Query: 129 VAVSFEICCCGGFGFGFRSRKCDNPKCKGLKKALEFDLQLQTEECLKSGPNDIDKLPWKG 188
           ++    I  C         ++C  P CKGL+KA+EFD+QL+TEEC+KS  N       K 
Sbjct: 124 ISTWLVILLC-------TMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN-------KR 183

Query: 189 GSETNP--DYECLRAELRKMAPPNGRAVLLFRAKCGCPIAKLVGWGPKK-GRKHKK 232
           G    P   +  L AEL+KMAPPNGRAVL+FRA+CGC + +LV  GPKK  RK KK
Sbjct: 184 GMFELPRVHHRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215

The following BLAST results are available for this feature:

BLAST of Spo27003.1 vs. NCBI nr
BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
BLAST of Spo27003.1 vs. ExPASy Swiss-Prot
BLAST of Spo27003.1 vs. TAIR (Arabidopsis)

BLAST of Spo27003.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902187342\|gb\|KNA10894.1\|	7.4e-124	100.	hypothetical protein SOVF_1400...	[more]
gi\|731364355\|ref\|XP_010693926.1\|	8.3e-83	72.2	PREDICTED: uncharacterized pro...	[more]
gi\|590657519\|ref\|XP_007034587.1\|	3.5e-73	64.8	Ribosomal protein L34e superfa...	[more]
gi\|743933671\|ref\|XP_011011159.1\|	5.1e-72	66.5	PREDICTED: uncharacterized pro...	[more]
gi\|566188919\|ref\|XP_002314419.2\|	6.6e-72	67.2	hypothetical protein POPTR_001...	[more]

BLAST of Spo27003.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QUE7_SPIOL	5.2e-124	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BBL2_BETVU	5.8e-83	72.2	Uncharacterized protein OS=Bet...	[more]
F6HDL0_VITVI	5.8e-75	67.6	Putative uncharacterized prote...	[more]
A0A061ELE6_THECC	2.4e-73	64.8	Ribosomal protein L34e superfa...	[more]
A9PHB0_POPTR	4.6e-72	67.2	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo27003.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
Y5902_ARATH	3.8e-59	55.0	Uncharacterized protein At5g19...	[more]

BLAST of Spo27003.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G06180.1	2.0e-66	61.3	Ribosomal protein L34e superfa...	[more]
AT5G19025.1	2.1e-60	55.0	Ribosomal protein L34e superfa...	[more]
AT5G15260.1	3.0e-22	41.4	Ribosomal protein L34e superfa...	[more]
AT3G01170.1	5.6e-21	38.1	Ribosomal protein L34e superfa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008195	Ribosomal protein L34Ae	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 6..237 score: 1.7E
None	No IPR available	PANTHER	PTHR10759:SF3	SUBFAMILY NOT NAMED	coord: 6..237 score: 1.7E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome