Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTACTTAAGTTCCCATGTATAATAATTATTTACTTCCTTTATTTCCACCTTGATTCTACATTTCTACAATAGCATAATATTTTTAGCAAAAATACAAAATACAAAATACAAAATACACAAATATATCCTTCCTTATTAAAATAGATCACGTAATAATAATATCTTGTTGAGATAGTACGTCCGTATAAGAAAAGTCATATTTTCCTACATAATCGTACAAGTACCCTACCTCTTTTTGCAACCTTATAGTCTCTCCTCTTGTATTTAAACACCACTCATTGAGTCATTTCCCTTTCCTCCTCCATTATTTACTTTACTGTTTGGTACCATTTTCAATTCTTTTCTATATATCTCAAGTTCTCAACCCACATATTACATATAACATCCCAATTTGATTTCATCCATGGCTTCATCTAAGCTATTGAGTGTTCTGTTAGTCTGTTTTGCAGTTTTCGGGTTATCGGATGCTGTTAACCCACTTATGCATTATGTTAATGGTAGACAAGGATGGGTTCTTCACCCTGTTGAGGATTACAATAATTGGGCTGGTCGCAACCGATTTCTCGTCCATGATACTCTTTGTAAGTTAGTACTTTACGTGAAATGTTATCGAGATTTGATTAATCGAAATTAAGCTTAATTATATGTTATGTGTTTTTATTATTGGCAGTGTTTAGGTACAACAAAGAAATTGATTCAGTGATGGAAGTGAGTAAAGAGGATTATGATACTTGTAATGTTGATAAGCCTATACAAAAGAAGGATGATGGTGAATCTGAGTTTGAGTTGAGTCATCCAGGTCCATTTTACTACATTAGTGGTAACAAGACTCATTGTGATCAAGGTCAGAAGATTATTGTTAAGGTTTTACAATTACCTTCTGGTTACCCTCCTCAATCTTCTCCTACCCCGCCATCGCCTTCCACTCCAGGTGCGCTTCCTCACCCTCATCCACAAACACCTCCGTCAGCCCAAACCCCGAAAAGCGCCCCTGCTTCACAACCTCCAATGGCTACCGCACCTAGCACCGGTGGTCCAAAAACCGCACCTGGTCCTACCGGAACACCCCGAAGTGGCACTACACCCTCCACTTCAGCTCCAGCAATGTCCCCACCATCAGCCACGTCACCTTCCTCCGCCATGTCAGGTCCAGCAATGTCCCCACCATCAGCCACATCACCTTCCTCCGGTACCCCTGCCATGTCAGGTCCAGCGATGTCCCCAACATCCGCCACATCACCTTCCTCTGCCATGTCAGGTCCAGCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGGCATGTCACCTTCAGACTCTCCCATGATGGCTGGTCCAGCACTATCTCCAGGTGGCGATCTCGCTTCACCTCCGGCACCACCAACAGCATCCGGACCGGGTTCAGCTTCTGATACTTCTCCAGCACCGGCAGCCGAATCGAGAAACGCCGCAGTGAGGAGGAACGGCGGCTATTCAATGGGTGTTTTGTCAGTATTAGTCGCTTTAGTTATGTGGTTTAATTAATTTCTCATTTACTTTTGAGTCAATTATTATTATGATTATTATTTTATCTTTTTTATTTTATGTGGAGGCATAGGGGTACATGTGTGTGATTATCTCTATATCTACTTTTCTAGAGCTGTTTTATGATTTTAGGTTTGGACAGTGATTTTTTCTTTTTTGTGTATTTATTATTCGAGTTTTGAATAAATATTTACTCTTTATGTTCTTAAATAAATTTCATTGTTTCGGAATTTGTTTATTGTTCATCATTTTAGAAATTATT AGCTTACTTAAGTTCCCATGTATAATAATTATTTACTTCCTTTATTTCCACCTTGATTCTACATTTCTACAATAGCATAATATTTTTAGCAAAAATACAAAATACAAAATACAAAATACACAAATATATCCTTCCTTATTAAAATAGATCACGTAATAATAATATCTTGTTGAGATAGTACGTCCGTATAAGAAAAGTCATATTTTCCTACATAATCGTACAAGTACCCTACCTCTTTTTGCAACCTTATAGTCTCTCCTCTTGTATTTAAACACCACTCATTGAGTCATTTCCCTTTCCTCCTCCATTATTTACTTTACTGTTTGGTACCATTTTCAATTCTTTTCTATATATCTCAAGTTCTCAACCCACATATTACATATAACATCCCAATTTGATTTCATCCATGGCTTCATCTAAGCTATTGAGTGTTCTGTTAGTCTGTTTTGCAGTTTTCGGGTTATCGGATGCTGTTAACCCACTTATGCATTATGTTAATGGTAGACAAGGATGGGTTCTTCACCCTGTTGAGGATTACAATAATTGGGCTGGTCGCAACCGATTTCTCGTCCATGATACTCTTTTGTTTAGGTACAACAAAGAAATTGATTCAGTGATGGAAGTGAGTAAAGAGGATTATGATACTTGTAATGTTGATAAGCCTATACAAAAGAAGGATGATGGTGAATCTGAGTTTGAGTTGAGTCATCCAGGTCCATTTTACTACATTAGTGGTAACAAGACTCATTGTGATCAAGGTCAGAAGATTATTGTTAAGGTTTTACAATTACCTTCTGGTTACCCTCCTCAATCTTCTCCTACCCCGCCATCGCCTTCCACTCCAGGTGCGCTTCCTCACCCTCATCCACAAACACCTCCGTCAGCCCAAACCCCGAAAAGCGCCCCTGCTTCACAACCTCCAATGGCTACCGCACCTAGCACCGGTGGTCCAAAAACCGCACCTGGTCCTACCGGAACACCCCGAAGTGGCACTACACCCTCCACTTCAGCTCCAGCAATGTCCCCACCATCAGCCACGTCACCTTCCTCCGCCATGTCAGGTCCAGCAATGTCCCCACCATCAGCCACATCACCTTCCTCCGGTACCCCTGCCATGTCAGGTCCAGCGATGTCCCCAACATCCGCCACATCACCTTCCTCTGCCATGTCAGGTCCAGCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGGCATGTCACCTTCAGACTCTCCCATGATGGCTGGTCCAGCACTATCTCCAGGTGGCGATCTCGCTTCACCTCCGGCACCACCAACAGCATCCGGACCGGGTTCAGCTTCTGATACTTCTCCAGCACCGGCAGCCGAATCGAGAAACGCCGCAGTGAGGAGGAACGGCGGCTATTCAATGGGTGTTTTGTCAGTATTAGTCGCTTTAGTTATGTGGTTTAATTAATTTCTCATTTACTTTTGAGTCAATTATTATTATGATTATTATTTTATCTTTTTTATTTTATGTGGAGGCATAGGGGTACATGTGTGTGATTATCTCTATATCTACTTTTCTAGAGCTGTTTTATGATTTTAGGTTTGGACAGTGATTTTTTCTTTTTTGTGTATTTATTATTCGAGTTTTGAATAAATATTTACTCTTTATGTTCTTAAATAAATTTCATTGTTTCGGAATTTGTTTATTGTTCATCATTTTAGAAATTATT ATGGCTTCATCTAAGCTATTGAGTGTTCTGTTAGTCTGTTTTGCAGTTTTCGGGTTATCGGATGCTGTTAACCCACTTATGCATTATGTTAATGGTAGACAAGGATGGGTTCTTCACCCTGTTGAGGATTACAATAATTGGGCTGGTCGCAACCGATTTCTCGTCCATGATACTCTTTTGTTTAGGTACAACAAAGAAATTGATTCAGTGATGGAAGTGAGTAAAGAGGATTATGATACTTGTAATGTTGATAAGCCTATACAAAAGAAGGATGATGGTGAATCTGAGTTTGAGTTGAGTCATCCAGGTCCATTTTACTACATTAGTGGTAACAAGACTCATTGTGATCAAGGTCAGAAGATTATTGTTAAGGTTTTACAATTACCTTCTGGTTACCCTCCTCAATCTTCTCCTACCCCGCCATCGCCTTCCACTCCAGGTGCGCTTCCTCACCCTCATCCACAAACACCTCCGTCAGCCCAAACCCCGAAAAGCGCCCCTGCTTCACAACCTCCAATGGCTACCGCACCTAGCACCGGTGGTCCAAAAACCGCACCTGGTCCTACCGGAACACCCCGAAGTGGCACTACACCCTCCACTTCAGCTCCAGCAATGTCCCCACCATCAGCCACGTCACCTTCCTCCGCCATGTCAGGTCCAGCAATGTCCCCACCATCAGCCACATCACCTTCCTCCGGTACCCCTGCCATGTCAGGTCCAGCGATGTCCCCAACATCCGCCACATCACCTTCCTCTGCCATGTCAGGTCCAGCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGCCACATCACCTTCCTCCGATACCCCCATGATGCCAGGTCCATCAATGTCCCCAACATCAGGCATGTCACCTTCAGACTCTCCCATGATGGCTGGTCCAGCACTATCTCCAGGTGGCGATCTCGCTTCACCTCCGGCACCACCAACAGCATCCGGACCGGGTTCAGCTTCTGATACTTCTCCAGCACCGGCAGCCGAATCGAGAAACGCCGCAGTGAGGAGGAACGGCGGCTATTCAATGGGTGTTTTGTCAGTATTAGTCGCTTTAGTTATGTGGTTTAATTAA MASSKLLSVLLVCFAVFGLSDAVNPLMHYVNGRQGWVLHPVEDYNNWAGRNRFLVHDTLLFRYNKEIDSVMEVSKEDYDTCNVDKPIQKKDDGESEFELSHPGPFYYISGNKTHCDQGQKIIVKVLQLPSGYPPQSSPTPPSPSTPGALPHPHPQTPPSAQTPKSAPASQPPMATAPSTGGPKTAPGPTGTPRSGTTPSTSAPAMSPPSATSPSSAMSGPAMSPPSATSPSSGTPAMSGPAMSPTSATSPSSAMSGPAMSPTSATSPSSDTPMMPGPSMSPTSATSPSSDTPMMPGPSMSPTSGMSPSDSPMMAGPALSPGGDLASPPAPPTASGPGSASDTSPAPAAESRNAAVRRNGGYSMGVLSVLVALVMWFN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo26311.1 vs. NCBI nr
Match: gi|902157664|gb|KNA06148.1| (hypothetical protein SOVF_183810 [Spinacia oleracea]) HSP 1 Score: 637.1 bits (1642), Expect = 1.900e-179 Identity = 356/377 (94.43%), Postives = 356/377 (94.43%), Query Frame = 1
BLAST of Spo26311.1 vs. NCBI nr
Match: gi|731329289|ref|XP_010675510.1| (PREDICTED: early nodulin-like protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 293.5 bits (750), Expect = 5.200e-76 Identity = 232/453 (51.21%), Postives = 278/453 (61.37%), Query Frame = 1
BLAST of Spo26311.1 vs. NCBI nr
Match: gi|702365105|ref|XP_010060595.1| (PREDICTED: early nodulin-like protein 2 [Eucalyptus grandis]) HSP 1 Score: 165.6 bits (418), Expect = 1.600e-37 Identity = 155/388 (39.95%), Postives = 215/388 (55.41%), Query Frame = 1
BLAST of Spo26311.1 vs. NCBI nr
Match: gi|567919620|ref|XP_006451816.1| (hypothetical protein CICLE_v10008649mg [Citrus clementina]) HSP 1 Score: 159.5 bits (402), Expect = 1.200e-35 Identity = 151/359 (42.06%), Postives = 195/359 (54.32%), Query Frame = 1
BLAST of Spo26311.1 vs. NCBI nr
Match: gi|922529880|ref|XP_013597207.1| (PREDICTED: early nodulin-like protein 2 isoform X2 [Brassica oleracea var. oleracea]) HSP 1 Score: 155.2 bits (391), Expect = 2.200e-34 Identity = 145/336 (43.15%), Postives = 194/336 (57.74%), Query Frame = 1
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHJ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183810 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 1.300e-179 Identity = 356/377 (94.43%), Postives = 356/377 (94.43%), Query Frame = 1
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g086890 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 3.700e-76 Identity = 232/453 (51.21%), Postives = 278/453 (61.37%), Query Frame = 1
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Match: A0A059BNC3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01151 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.100e-37 Identity = 155/388 (39.95%), Postives = 215/388 (55.41%), Query Frame = 1
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Match: A0A067FGD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016941mg PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 8.200e-36 Identity = 151/359 (42.06%), Postives = 195/359 (54.32%), Query Frame = 1
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Match: V4URE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008649mg PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 8.200e-36 Identity = 151/359 (42.06%), Postives = 195/359 (54.32%), Query Frame = 1
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.500e-30 Identity = 139/385 (36.10%), Postives = 196/385 (50.91%), Query Frame = 1
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.500e-17 Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 1
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 4.000e-15 Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = 1
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Match: ENL1_ORYSJ (Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-14 Identity = 75/233 (32.19%), Postives = 111/233 (47.64%), Query Frame = 1
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 6.300e-13 Identity = 58/170 (34.12%), Postives = 95/170 (55.88%), Query Frame = 1
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Match: AT4G27520.1 (early nodulin-like protein 2) HSP 1 Score: 134.4 bits (337), Expect = 1.400e-31 Identity = 139/385 (36.10%), Postives = 196/385 (50.91%), Query Frame = 1
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Match: AT4G28365.1 (early nodulin-like protein 3) HSP 1 Score: 119.0 bits (297), Expect = 6.200e-27 Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Match: AT5G53870.1 (early nodulin-like protein 1) HSP 1 Score: 115.2 bits (287), Expect = 9.000e-26 Identity = 144/358 (40.22%), Postives = 195/358 (54.47%), Query Frame = 1
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Match: AT4G32490.1 (early nodulin-like protein 4) HSP 1 Score: 101.3 bits (251), Expect = 1.300e-21 Identity = 84/228 (36.84%), Postives = 115/228 (50.44%), Query Frame = 1
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Match: AT1G48940.1 (early nodulin-like protein 6) HSP 1 Score: 96.7 bits (239), Expect = 3.300e-20 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26311.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26311.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26311.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26311.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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