Spo26183.1 (mRNA)

Overview
NameSpo26183.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionOvate family protein 5
LocationSpoScf_03681 : 1217 .. 1543 (+)
Sequence length327
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAATCCCAGACAATAAGAGCAAACTACAAGCATCAACTGAAGAAGAAGATGATGCTTTCGCGAAACCGAAGCGCTAGGATAAGTTTCTCAGCAAACTTACCTAGTGATGTATGTGGAGTTTGGGCAGATAATGCTATGTGTTTAGTATTGGATACTGAAGATCCGTTTACCGAGTTGAAACGGTCGATTCTCGAGATGGTTCGAGAGGTTGGTGTTTGTAATTGGGGGGAGATGGAGGAGCTTGTTTACTGTTATATTGCTCTGAATTCCTCTGATGTTCATAGGTTTATTCATGATGCTTTTCTTAGCTTGTTTTGCTGA

mRNA sequence

ATGGATGAATCCCAGACAATAAGAGCAAACTACAAGCATCAACTGAAGAAGAAGATGATGCTTTCGCGAAACCGAAGCGCTAGGATAAGTTTCTCAGCAAACTTACCTAGTGATGTATGTGGAGTTTGGGCAGATAATGCTATGTGTTTAGTATTGGATACTGAAGATCCGTTTACCGAGTTGAAACGGTCGATTCTCGAGATGGTTCGAGAGGTTGGTGTTTGTAATTGGGGGGAGATGGAGGAGCTTGTTTACTGTTATATTGCTCTGAATTCCTCTGATGTTCATAGGTTTATTCATGATGCTTTTCTTAGCTTGTTTTGCTGA

Coding sequence (CDS)

ATGGATGAATCCCAGACAATAAGAGCAAACTACAAGCATCAACTGAAGAAGAAGATGATGCTTTCGCGAAACCGAAGCGCTAGGATAAGTTTCTCAGCAAACTTACCTAGTGATGTATGTGGAGTTTGGGCAGATAATGCTATGTGTTTAGTATTGGATACTGAAGATCCGTTTACCGAGTTGAAACGGTCGATTCTCGAGATGGTTCGAGAGGTTGGTGTTTGTAATTGGGGGGAGATGGAGGAGCTTGTTTACTGTTATATTGCTCTGAATTCCTCTGATGTTCATAGGTTTATTCATGATGCTTTTCTTAGCTTGTTTTGCTGA

Protein sequence

MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo26183Spo26183gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo26183.1Spo26183.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo26183.1.exon.1Spo26183.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo26183.1.CDS.1Spo26183.1.CDS.1CDS


Homology
BLAST of Spo26183.1 vs. NCBI nr
Match: gi|902210999|gb|KNA16588.1| (hypothetical protein SOVF_087840 [Spinacia oleracea])

HSP 1 Score: 223.4 bits (568), Expect = 1.900e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1

		  

Query: 1   MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE 60
           MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE
Sbjct: 1   MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE 60

Query: 61  LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC
Sbjct: 61  LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 108

BLAST of Spo26183.1 vs. NCBI nr
Match: gi|870865397|gb|KMT16453.1| (hypothetical protein BVRB_3g050760 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 6.400e-35
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 1

		  

Query: 9   ANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEM 68
           A  K++ +KK+MLSRNRS RISFSANLPSDV  VWA+NA+C VL T+DPF +LK+SILEM
Sbjct: 6   AKSKYKQQKKLMLSRNRSTRISFSANLPSDVGDVWANNAICAVLYTKDPFFDLKKSILEM 65

Query: 69  VREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLF 108
           +REVGVCNWG+MEELVYCYIALNSS VH  I DAFLSLF
Sbjct: 66  IREVGVCNWGDMEELVYCYIALNSSQVHSLIQDAFLSLF 104

BLAST of Spo26183.1 vs. NCBI nr
Match: gi|731424603|ref|XP_010662940.1| (PREDICTED: transcription repressor OFP10-like [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 2.500e-23
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1

		  

Query: 15  LKKKMMLSRNR----SARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVR 74
           +KK   + RN     S+RISFSA+LP DVCG +AD+ +C V  + DPF++++ SI+EM+R
Sbjct: 15  MKKMQKIKRNEHKHWSSRISFSASLPGDVCGGFADS-VCAVKYSMDPFSDMRESIMEMIR 74

Query: 75  EVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSL 107
           EVGV +W EMEELVYCYIALNSS VH+FI DAFLSL
Sbjct: 75  EVGVHDWNEMEELVYCYIALNSSQVHQFIQDAFLSL 109

BLAST of Spo26183.1 vs. NCBI nr
Match: gi|224132588|ref|XP_002321359.1| (hypothetical protein POPTR_0015s00660g [Populus trichocarpa])

HSP 1 Score: 109.4 bits (272), Expect = 4.000e-21
Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1

		  

Query: 16  KKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVREVGVC 75
           K+K +  +  S RIS SA+LP DVCG ++ + +C V  ++DPF++++ SILEM++ VGV 
Sbjct: 8   KRKAITRKKSSYRISLSASLPEDVCGAFSGDTICAVKLSKDPFSDMRASILEMIQNVGVH 67

Query: 76  NWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           +W EMEELVYCYIALNS D+H  I +AFLSL C
Sbjct: 68  DWDEMEELVYCYIALNSPDLHGIIANAFLSLSC 100

BLAST of Spo26183.1 vs. NCBI nr
Match: gi|901807957|gb|KMZ64906.1| (Ovate family protein 4 [Zostera marina])

HSP 1 Score: 102.4 bits (254), Expect = 4.900e-19
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 1

		  

Query: 12  KHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVRE 71
           + Q KKKM   R+ S  +SFSAN P D+ G +  N++C V  T DPF + ++SI EM+ +
Sbjct: 2   EQQQKKKMRKRRSSSQDLSFSANRPQDINGDFK-NSICAVKQTRDPFVDFRQSIAEMIVQ 61

Query: 72  VGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           VGV +W +MEELVYCY+ LNS+DVH FI DAFLS FC
Sbjct: 62  VGVHDWEDMEELVYCYLKLNSTDVHGFIVDAFLS-FC 96

BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAP5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087840 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.300e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1

		  

Query: 1   MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE 60
           MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE
Sbjct: 1   MDESQTIRANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTE 60

Query: 61  LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC
Sbjct: 61  LKRSILEMVREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 108

BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWW6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050760 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.500e-35
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 1

		  

Query: 9   ANYKHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEM 68
           A  K++ +KK+MLSRNRS RISFSANLPSDV  VWA+NA+C VL T+DPF +LK+SILEM
Sbjct: 6   AKSKYKQQKKLMLSRNRSTRISFSANLPSDVGDVWANNAICAVLYTKDPFFDLKKSILEM 65

Query: 69  VREVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLF 108
           +REVGVCNWG+MEELVYCYIALNSS VH  I DAFLSLF
Sbjct: 66  IREVGVCNWGDMEELVYCYIALNSSQVHSLIQDAFLSLF 104

BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Match: F6H791_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00740 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.800e-23
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1

		  

Query: 15  LKKKMMLSRNR----SARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVR 74
           +KK   + RN     S+RISFSA+LP DVCG +AD+ +C V  + DPF++++ SI+EM+R
Sbjct: 15  MKKMQKIKRNEHKHWSSRISFSASLPGDVCGGFADS-VCAVKYSMDPFSDMRESIMEMIR 74

Query: 75  EVGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSL 107
           EVGV +W EMEELVYCYIALNSS VH+FI DAFLSL
Sbjct: 75  EVGVHDWNEMEELVYCYIALNSSQVHQFIQDAFLSL 109

BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Match: B9IDH1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s00660g PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.800e-21
Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1

		  

Query: 16  KKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVREVGVC 75
           K+K +  +  S RIS SA+LP DVCG ++ + +C V  ++DPF++++ SILEM++ VGV 
Sbjct: 8   KRKAITRKKSSYRISLSASLPEDVCGAFSGDTICAVKLSKDPFSDMRASILEMIQNVGVH 67

Query: 76  NWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           +W EMEELVYCYIALNS D+H  I +AFLSL C
Sbjct: 68  DWDEMEELVYCYIALNSPDLHGIIANAFLSLSC 100

BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Match: A0A0K9P795_ZOSMR (Ovate family protein 4 OS=Zostera marina GN=ZOSMA_345G00230 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.400e-19
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 1

		  

Query: 12  KHQLKKKMMLSRNRSARISFSANLPSDVCGVWADNAMCLVLDTEDPFTELKRSILEMVRE 71
           + Q KKKM   R+ S  +SFSAN P D+ G +  N++C V  T DPF + ++SI EM+ +
Sbjct: 2   EQQQKKKMRKRRSSSQDLSFSANRPQDINGDFK-NSICAVKQTRDPFVDFRQSIAEMIVQ 61

Query: 72  VGVCNWGEMEELVYCYIALNSSDVHRFIHDAFLSLFC 109
           VGV +W +MEELVYCY+ LNS+DVH FI DAFLS FC
Sbjct: 62  VGVHDWEDMEELVYCYLKLNSTDVHGFIVDAFLS-FC 96

BLAST of Spo26183.1 vs. TAIR (Arabidopsis)
Match: AT1G79960.1 (ovate family protein 14)

HSP 1 Score: 47.4 bits (111), Expect = 6.600e-6
Identity = 23/70 (32.86%), Postives = 44/70 (62.86%), Query Frame = 1

		  

Query: 42  VWADNAMCLVLDTEDPFTELKRSILEMVR-EVGV----CNWGEMEELVYCYIALNSSDVH 101
           V  +N + ++  T++P  + ++S++EM+  ++G+     +W  MEEL++CY+ LN    H
Sbjct: 187 VLPENCIAVLRYTDEPQEDFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSH 246

Query: 102 RFIHDAFLSL 107
           +FI  AF+ L
Sbjct: 247 KFILSAFVDL 256

The following BLAST results are available for this feature:
BLAST of Spo26183.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902210999|gb|KNA16588.1|1.9e-55100.hypothetical protein SOVF_0878... [more]
gi|870865397|gb|KMT16453.1|6.4e-3575.7hypothetical protein BVRB_3g05... [more]
gi|731424603|ref|XP_010662940.1|2.5e-2361.4PREDICTED: transcription repre... [more]
gi|224132588|ref|XP_002321359.1|4.0e-2154.8hypothetical protein POPTR_001... [more]
gi|901807957|gb|KMZ64906.1|4.9e-1954.6Ovate family protein 4 [Zoster... [more]
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BLAST of Spo26183.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RAP5_SPIOL1.3e-55100.Uncharacterized protein OS=Spi... [more]
A0A0J8CWW6_BETVU4.5e-3575.7Uncharacterized protein OS=Bet... [more]
F6H791_VITVI1.8e-2361.4Putative uncharacterized prote... [more]
B9IDH1_POPTR2.8e-2154.8Uncharacterized protein OS=Pop... [more]
A0A0K9P795_ZOSMR3.4e-1954.6Ovate family protein 4 OS=Zost... [more]
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BLAST of Spo26183.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26183.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G79960.16.6e-632.8ovate family protein 14[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006458Ovate protein family, C-terminalPFAMPF04844Ovatecoord: 55..107
score: 2.2
IPR006458Ovate protein family, C-terminalTIGRFAMsTIGR01568TIGR01568coord: 50..106
score: 8.2
IPR006458Ovate protein family, C-terminalPROFILEPS51754OVATEcoord: 50..108
score: 14
NoneNo IPR availablePANTHERPTHR33057FAMILY NOT NAMEDcoord: 1..106
score: 1.6
NoneNo IPR availablePANTHERPTHR33057:SF14SUBFAMILY NOT NAMEDcoord: 1..106
score: 1.6