Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTATGGTTCCCTTTGTTTACCAGGTAAAATTTCATATTTCAATTCTTCATAACTTTGTGGTTCTAATCAGTTGGATTAACTAGAAAAATAGGCAATCTGCAAAACTAATACCCATAATATGTTGAAAAGGATCCTAAAACAGGGCATTGGTGGCTTCTACTACGCAACCCAGGTAAACCAGACGCCATTGTTGGTTATTGGCCACGAGAGATATTCACCGGTTTGGCAAATGGCGCGACTTATATTGCAGTTGGTGGAGAGGCATATAGCCCACCTGGTCAGCCTCTTCCTCCCATCGGAAACGGTTATTATCCGGTTGAAGATGCTACATTATCTGCATTTTGTGCTCGTCTTGTAGTTTTAGATTCAAACCATCAAAAGATTAGCCCTAAACAAACTGAAAAGTATACCGATAATTGGCATTATGGAGTCTATGATAGGGAACATTATGACAATTTAGGAAGAACAATCTTCTTCGGTGGTACTACAATGTAATTACATTTTCAGAATACAGGAAATAAAAACAACGATCAGTAATACTCGATAATTGACGTTTGCATTCTTGTTTTTCCGCCTTCTACCATATCATAAACACCACACGTATCTTGTTACTTCATACTGAAGTATGTTACAACATAGAGCTACAACCCAAGGAAAGGTGCATCCTAAATGTTTTACAAAGGATATAAAAAGCTACACCAATAGCATAACAAAGCCAAGGAAATCCTTGGCAAATAATGATAGTCAATGTTTGCCTGAAACCTGAAAAGCAAAGCATCGTAGGTTTTGCAGCCTTTGAGATCGAAGTCACGAAGTGTTGCACGTCTTTTCTGGCATCCATGGCTTGTGACGATACTTAACAATTTCGTATCCATCGTGAATTGAAATCACAAAATATTGACAGTTTTTTACCCCCAAGCTCGTATCAGAGTCAAAAAATGATTTTTATTAAAATATTTCATTTAAAATGATAAATTCATTTATGCATGTACCATATAAATATAGTTTTTTTACACTATTCCAATATGTCATTACTAAAACCGTCAAAAGAATCATGGCGGCACAGTGTACAACGACAATCATGGTTTAAAAACCATGAGCTAGTACAGTGAGAGTGAAAAACATGGCGGCAAGCAGAAAGGATGCACAACTTCTCCCAATCAACAAAAGGAAAATTGCATATCATACAATCTATATGACTAAAATCATTAGAATGTTCAGTTGA ATGGTGTATGGTTCCCTTTGTTTACCAGGGCATTGGTGGCTTCTACTACGCAACCCAGGTAAACCAGACGCCATTGTTGGTTATTGGCCACGAGAGATATTCACCGGTTTGGCAAATGGCGCGACTTATATTGCAGTTGGTGGAGAGGCATATAGCCCACCTGGTCAGCCTCTTCCTCCCATCGGAAACGGTTATTATCCGGTTGAAGATGCTACATTATCTGCATTTTGTGCTCGTCTTGTAGTTTTAGATTCAAACCATCAAAAGATTAGCCCTAAACAAACTGAAAAGTATACCGATAATTGGCATTATGGAGTCTATGATAGGGAACATTATGACAATTTAGGAAGAACAATCTTCTTCGGTGTGAGAGTGAAAAACATGGCGGCAAGCAGAAAGGATGCACAACTTCTCCCAATCAACAAAAGGAAAATTGCATATCATACAATCTATATGACTAAAATCATTAGAATGTTCAGTTGA ATGGTGTATGGTTCCCTTTGTTTACCAGGGCATTGGTGGCTTCTACTACGCAACCCAGGTAAACCAGACGCCATTGTTGGTTATTGGCCACGAGAGATATTCACCGGTTTGGCAAATGGCGCGACTTATATTGCAGTTGGTGGAGAGGCATATAGCCCACCTGGTCAGCCTCTTCCTCCCATCGGAAACGGTTATTATCCGGTTGAAGATGCTACATTATCTGCATTTTGTGCTCGTCTTGTAGTTTTAGATTCAAACCATCAAAAGATTAGCCCTAAACAAACTGAAAAGTATACCGATAATTGGCATTATGGAGTCTATGATAGGGAACATTATGACAATTTAGGAAGAACAATCTTCTTCGGTGTGAGAGTGAAAAACATGGCGGCAAGCAGAAAGGATGCACAACTTCTCCCAATCAACAAAAGGAAAATTGCATATCATACAATCTATATGACTAAAATCATTAGAATGTTCAGTTGA MVYGSLCLPGHWWLLLRNPGKPDAIVGYWPREIFTGLANGATYIAVGGEAYSPPGQPLPPIGNGYYPVEDATLSAFCARLVVLDSNHQKISPKQTEKYTDNWHYGVYDREHYDNLGRTIFFGVRVKNMAASRKDAQLLPINKRKIAYHTIYMTKIIRMFS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo25901.1 vs. NCBI nr
Match: gi|731374712|ref|XP_010667044.1| (PREDICTED: uncharacterized protein LOC104884146 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 186.4 bits (472), Expect = 3.800e-44 Identity = 79/113 (69.91%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Spo25901.1 vs. NCBI nr
Match: gi|870854500|gb|KMT06269.1| (hypothetical protein BVRB_7g161940 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 144.1 bits (362), Expect = 2.200e-31 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1
BLAST of Spo25901.1 vs. NCBI nr
Match: gi|731345866|ref|XP_010684145.1| (PREDICTED: uncharacterized protein LOC104898741 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 144.1 bits (362), Expect = 2.200e-31 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1
BLAST of Spo25901.1 vs. NCBI nr
Match: gi|731345868|ref|XP_010684146.1| (PREDICTED: uncharacterized protein LOC104898742 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 142.1 bits (357), Expect = 8.300e-31 Identity = 59/112 (52.68%), Postives = 79/112 (70.54%), Query Frame = 1
BLAST of Spo25901.1 vs. NCBI nr
Match: gi|731345876|ref|XP_010684150.1| (PREDICTED: uncharacterized protein LOC104898746 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 137.9 bits (346), Expect = 1.600e-29 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1T6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161940 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.500e-31 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Match: A0A072TMV4_MEDTR (Carboxyl-terminal peptidase OS=Medicago truncatula GN=MTR_8g012985 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-16 Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 1
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Match: A0A067JM94_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27098 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.900e-16 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 1
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Match: G7KW24_MEDTR (DUF239 domain protein OS=Medicago truncatula GN=MTR_7g072230 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.000e-16 Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Match: M1DFI0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037801 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.200e-14 Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Match: AT5G25410.1 (Protein of Unknown Function (DUF239)) HSP 1 Score: 75.9 bits (185), Expect = 2.600e-14 Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 1
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Match: AT5G25415.1 (Protein of Unknown Function (DUF239)) HSP 1 Score: 73.6 bits (179), Expect = 1.300e-13 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 1
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Match: AT2G27320.1 (Protein of Unknown Function (DUF239)) HSP 1 Score: 72.0 bits (175), Expect = 3.700e-13 Identity = 31/84 (36.90%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Match: AT2G35250.1 (Protein of Unknown Function (DUF239)) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-12 Identity = 29/83 (34.94%), Postives = 53/83 (63.86%), Query Frame = 1
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Match: AT5G11660.1 (Protein of Unknown Function (DUF239)) HSP 1 Score: 67.8 bits (164), Expect = 7.000e-12 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25901.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25901.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25901.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo25901.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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