Spo24745.1 (mRNA) | SpinachBase

Overview


Name	Spo24745.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING/U-box superfamily protein
Location	Super_scaffold_124 : 190258 .. 199198 (-)
Sequence length	1589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAACCGTTGGTTAGCATGCCAATTTGTATCATGTGAACATCCCTTCTGTCTTTTACAAATGCTTGCGAGCGAGACAATACCCACGAAAGGTACGCACCACGTAACCCCTTACAGGTAACAGGTCAGATAGGGAGAGAATACAGTTAACCCAGAAATCCCAATTTCAAGACATTCATTCCCAATTTCAGAGGCCACCCAAAAAATTATTTTTAAAAAAAAAAGAACAGATAAAAAGAGAATATAATTTTGTCTGTGTGATCATCTTTCTGGGTCTTTAAAAACCCAGATTTTGATCCACAGTTTGGGTGATTCTGGGGTTGCTTTAATTATTCTGGGTTTTTTGGTTTGGAGTTTTTAGAGAGAGAAATTGTGGGGTTTTAATTGATTGTTGTTAGAAATGGTGAGGTCAAAAAACAGTAGTGATCAAGCAATTGATTTGAATGTTGAACCTGAGGAATCTTGTGCTTCTTGCTCTATTTGTCTTGATTTGGTGACCTTTGGTGGGGAAAGATCCAGTGCTAAACTTAATTGTGGCCATGAATTTCATCTGGGTAATAATTTTTTCACCTCATGTTTAAGTTCTTGTTTTTAATTTTTTTTATATTTTAATTTTGTGTATTTGGAAAAGTATATCTCTTTTAATTGATCAATTATGTAATTTGAGTTTATGGATATTCTTGTTTTAATTTTTTTGTCGTTAGCTGTGAAATTTGAGGATTTTTGTACTTGTTGTGGTTGATCACTTTAACATGTATAGAGTTTTGTTTAAGTTTTATTGAATTTATATGATACTGTTAGTTCATCTATGGTTTTGTATATCAACTTTTATGTGGCATTGGCTGATGATGGATAGTTTGTTGGTTTCAACTATTGCATGCGTGAGCAATACCTTTCCTACTAACGCAAGCATCATTCTCTTGAGTTTGCATCATATTCATCTTGCTAGAGATAATGAATTGGTGTTAGATAAAATCGCGGAAGTTTTAGGTGTTCAGCCCCTAAATCAAAGCCTTGCATGTGCCCGGACTCGTGGTTGTTGGGGTTGTGGTATGGAGCTATAAGCCAGTAGATACGGTAAGTGTTGGGGCTAGTTCCAAGAAAACAACTTTTTTGGTATTTTTGTATTAATTAGGGGCTCAGGGGTCATAATGGATACATGTGTGTGATTGTAATTTGTAAGTAGTCTTATGGCAATGCCTTTTAATGATTTAGTTGGTATAGGATCCTTTAACTTGTTTAATCATTTCGAAATGCATTAAGAAACAAATGTGATCCTACCGTTTGTGATGAAATTGTCGAACATGCTTCATGCATGACATAAAGTTTTTCCTTTTTGGATTGATCTCAAAAGATACATTTCATGCCACATTTCCACCAGTAACCAGATGAGGGGACTTTAGATAGTGAATGCATTCTGTATTTCAGTTTCATAGAACACGACACAAAAGCGTGAAGGCTCCCAGCTCCCTTATTCATGAGTCTGGCTTTATCTTTTACCTATATTGGAAGTTGGGATAGCTTGTGCTGGAATATAGTTTTGAGTATAAGCTGCAGGTTTGAGTTCAAGTTTGCAAGAACAAATTCTTCAGTTCAGTTGGTATGAAATTCCGCTATGTTTGACTGGGGCAATGTTTTTGAAAACCTTGACAAGATTACTTGATTTACTTCTTATCTTCATTTCTAGGTCTCATTAGGATAGCGTGCTCCTCACTGGTATCTAGTACAATAATTGTAAGCCTGACTGATGTTAGTGACTGGGGGTAGACCGTTGTAATGGCTGTTTCTGTACTGGGTTATTCTTGTTGTTGTTATGTTGCTGTCTTCATACAGTGAGTTGAAAACGGTTGTTACCCTGTTGGAGATATTCTGTTAAAGAGGATTTCATCGTTTTTGCCGTTTTTTTTTGCTTGACGTGTTTCACCTACTTTGTTTCCTCCAGCAATTCATTTAATTCTTGTAGAAAATTAGTTTATTTTTTTTGTTTTTTTTGTAACCGTCTCTTTTGGCTCGAGGCATTTCATCTTTGCATCCTGTTGTTATACTGTGATATTGCTAGGGTTAGATATTGTTGGCAATTGGCATCTTCTTCAATATGTTACGCAAAAGAATTGCTTGTCCCAAAAAGGAATACATCTATGTGTGGTGGCTTTAATGACACTTTGTAGAGGCTTTTAGTTAGGTTATTATGACGGGAGAACATCTGAAAATGATGATTTTATTTAAATATGTAGTGGATGGTAACTATTTCGTCACGTGTCCTCTTATTGCAATCTTTAAAACTAGATTCATCTTCATGTATGGGTACTGTGTTTGAAACATCAAATGACCTGGTTCATTTCAAAGTTCAATTCTTGCTCCTTCTGGTGTGGCAAATAGTTTCCTTAATGTGGGAGAGTGGGATCTATATGGAAAAGGATGGTGTTCTAGAGCTGTTCTGTGTAAGCTCAATAGTGTTGATCTTTCTTCTTACCGGGGATAGTTGAGGCAATATAAGCTACTAAGCGATGTAGTTTAGTACATTGTGGTTTCAAGATCATTTGTTAATTGTAAGATAGGATGCGGATTTGACATAAATGGTATTGGGTGTCGTTGGTGATTTCTTTGATTTGTTATCTTAAATTGATACGAAACATACGAGTAAAATGGAGTCAGGCTAAATATAGAGGTTAATCAATCTCTCAAAAATTGTGCATCTATTTTGCATTTAAAAAAGAGGTCTGTTTCTTTATAGCCCATATAAGAAGATGCAGTATGGAAAATTATAATACAATAAATATAGAAAGGAATTTTTTTAAAAGTTTCAAGGGACATTGGGAGTAGTACAGAAGCCAAAAATTTGCCTGCTTTCGCCTCAGCTTTGTGATAATGGACGAGAAAACCACCAAAGATCCCCTCGATCCAGTGGCTCGATATAACGATGGGGTAATATACTTGACATTACTTTTTGCTGAGTACTTCTTTTCGGGAGCCTTTCATATATTGTCTACAACTACAAGCAGTTAACAAGTGAACCAAGTATTATTAAATCAGGGGTAAGTTCTGCGTGACTGAATACAGTAGCCAATGTCCATTTTTTACTTGAGAAATAGCCGCTACCATCTTATGACGCTCTAGTCTATGAATGCAGATGTACGTTGACCCTCATAGCTGTAAACTTATAACTTTCTTTGCTTATAGCTATAATTCCTAGTTTTTGTTGCATAAGAGTTCTACAGTTCTTTTTATGTTCGAAAGTGTTCTAATTATTACTTTGTGCATTACAGCTTTTTATATATATATGTAGATAAGCTACGCTGCATTTGTCTTCTTTATCTTTGGCAAGGTTATACGGAGTTATATTGTTTGCTTTTTATCTTCTAGCCTAGCTTTTGTACCTGTTCCTTGGTGTCTTATTAGTAAACCTCTTTATTACTCATGAAGCAATATAGAAATGAAGATAATGATATTATCATCCGACTGTAGAGAAGAGTACTAAGTTCCTTATGTCTAGAATTATAAGCCTTGCTATGTTACCTAGTGTTCTCTAGTTCTTCTAACGGAACTTTTGGGTGGACAGGAGGCAGTCACTGGTTGATATAGACAAATTTGGAGCGTAAGTGTTTGGTACTAGCTAAAGTATGCTAAACGACCAATTCAATTGTTGAAATACTTTCAGATATCTTGAAATCACAAATTTAATTAGTGAAAAAGAATTAAACGGGAGATGCATCAAACAATAATGATATAAAAAAGTTTCTGGTTTCCTGAATATTTTACCAGCCTATAACTTTCATTGCTGTGCTATATGGTACAGACTGCATTGGTTCTGCATTCAATATGAAGGGAATGATGCAATGCCCAAACTGCCGGGGAATTGAGAAAGGTCGATGGTTATATGCAAGTGGTTCCACAAATTCATCTCCAGAACTAGGCATGGATGATGGAAGTGTTGATAACTATCCGTTTTACTTCACCTTTGCTGAAATGGTAATTGAATATACTTCTTTCCTTTTTTGTTTGGCTTTTCTGTACGAATTTATCTATGGAATCATATGCATCAGAAAATGAATGGAATCTGAACTTCGGCTGTGGATCAAAAAAATAATTGTCTGTGGAATAATTTGGTGCGAAAGCCGAGAATGATATTTATGCTGTAAATGGTTTCTTTTAAATTTAATTGGTTTTGTCAATTCAAATTCAATTTACTTGTTTTATCGTGGGTAAGAAAAATTACAATGTAAAAATTAGGTCACTATAACTTTGATCTGTTTTGACCAAGGACTCTGAAGGATCTTTAACTTGAAAGAACTTCTTGTAACTAATGCTATTTCTGTCATGCAAATTTGGGGGACAAATAATATGAAATTTGTATCAGATTTGTGCATTGCACGTATGCATTTGTTGCATGGTAAGAGACAAGAGTGGGAGCGAACTAGAATGTTAAAGAATAGTTTTAGAAGGGAATATGTGCTAAATTTCAACTTAAAGATTGGCTTTTATAGAAAATTTATTTTCATCAAGAACTGACTGGTTCTTTTAACTTATGGTTCTTCTGGGTGGAATTAGGTCACATAAACTTGGAGATTAGCTGATAAGTGTCTAATTCATAATGTTGAGCAGTCATCCATAGGGACTATAGGAGCTCCAACATTCTGAGAACTGAGAAGTAATTACTACTCGATATTAGAAGCATTATGGAAGTATGTTTTCCAAGTTTTAGGGTGTGTGCACAAGAGGAGATCTTTTGTAATGAAAGAACAATGAAATGCTATTTCGAGTAAATGCAATTAGTTTTCCATTAAAGTAAGTAAATGCACTTACCCTTTGGATGGCTACACAGCAACATCAAATCACTCCTATGCCTCTAAAGAAGCTACTGTTTTAAGCTGGTGGGGTAAATTCTGATTGGGTGTATGCTGGCTTATTTCTTTAACAATATATAGAGGCTGCTTCACCCTTGATCCGGATTGTTACTGTCATCTGATACGTCACAAATCACAATGCTTAAGAATCATAGACAAACTAGTTAATGATTTTGATTCATTCCATTATCATCCGAAATCAACGGATAGTGAATCTTCTGATACCAAAAATGGACAACTTTTGCAAAGCTAAGAATTTTAAAACATGAAAAGGAATGGATTGCATTATGTAGTTTCGAGGGGAAGACAAGGATTGTATTTTAAACCTTCTTAGATTGCTTTGGCTTCAGTTGAGAAGACTAAATATTGAGCACGTACTTTGTCTACTCGTACAATATATGCTGGACTCACCAAAAAATTTCAGTAGTTAAGATTGCATTATGTATTTTCCTGTTTTGTTTCTTTGTAATGTCCTTGGTTCATTGCTCCATAAGTAAGTATAGTGCCTTACATTTGTAGTTGTGTATTGTTGATTTCTCCTCGAAACTCCTTTTTTTTCGAAACTCCTTGTCTTCCCTGTATTTGACCGATGACAATTTCTTTGAAACTTTAATTTTAATTATGGAAGTTACTTTTCATTTCATAGGTCTGCCCAAAATTCTGCTTGTAGAGGAAGTTAATGATGTAGATGTATTCATGTTGATGAAGTTTTTGATTAAATGAATGAAAGTCAATCATACATAATTTCCGCATTTTTGTCTGCTGCAGCCCTATAGAGTTCACGTTTGTCCATTTCGTGGATTCACGCAAGTTCATCCATCTTCTCAGTAAGCACTTTCTCTCTCCTAAAGTGCCTGTGAAGTTAATTTAAGTGGTTATGCTTCTTATCTTTCTACTTCCTTGAAAATCTACAATACCTCTCACTCCTTGCCCCAGTTCCCACTCCAAATAAGGAAAGGTTTAGTAATAAGTTCTACTATATGATAGGTAGTATCTTACCACATTTTGACTAAATTACTGCACTTTGGGATTCCACAACAGTTTTGGACTTCTAATCACTTTCTCAGGTTGTTAAACATATTACTGTATGTGTGTTAAAGAAGCAACTTATCTATGTTCTTACCTTGTAGGATCTTGCGATATGTTGGTTGATTTTGTTAATGTAGATTATAAAAAATATTCTCTCATTTGCATTTTGGCTGCTTCAAAATATCTCACCTCTTTCCTCATATGGAAATTAATTATGATGCTACGACTCATCATAAAGCTGTGATGTATCTGTGTCAGCATGACATGAAAGACACGGGATGTGTGTCAAACTCCGGGGAAAGAGAACACACACCAAAATTTCAACAAGTGAAATCAGATTAAGCTGCTCTGTCTACGAAACCAAGTAGCATTGATCTCTTCAGTGTTCGAAAGTTCCCCAATTTCCAGATGTAGGGTTTGTATTCGAAAACCCAAGATCTAAAAAATTGACCAATCAATTGAGAAGCAAGAGAGAAGTTTAGGGCTTTCAATCCTACTAAAAGAGGCATTGTGGGCGATAGATTATTCTAGTTGTTGGAAGAATTTGGGGAGGAGGGTGGTGAGAGCAGAGAAGAACAACTTTTAGTCTTCTATGCAGACTTCAGGATGGTGAAAATAATTAAGCGGGCGTGTGGGAAGGAGTTAATGTTACAGTTGTTTCAGTCCTTATTGTCATTTAAGAGGCTAAGACATTTTAGTCCTTTGGGTATTTCGCGCAGTTTATTATTAACCTCTACTATTAGTAATTCTTTAGATACTCCATACAAATCATAAAACTAAAAAGAATTTTTGTCTAAGATCATGTTCACACCAGGTCTCAGTATCTTATTTAAAGTTTTAGCACTTATTTTTTGTGTCCAAGCATTTAGAAAATAAAGCTTTTCAGTTGCATAGGAAATTGATGTCAACAATAACATCCATATTATCCTACTACCTCTAGTGTGCTGCGTTGGGGGTGCATGTAGCAAATCTTAGGCATGTGATAACACAGGCTACTTCCACAGACCCTTCATTTGAATCTATCATCTTCTCTTCTGTTTTCTACCTCGTCAGTCTTGCCAAAGGTATAAGAGGATAATTTTTCTTTATTGTTTTTATTCTTTCCATTTCTCTTTTCTCATTTTCTGTTTTCATTTGTCATAAACTCATAATCGTTACTCCTTCCATCCTACAAGTAAAACATCAACTTTTTTTTTTTGTCATTGTCTCTTTACCCAGACCTTGCGTTAAGTAGCGAGAGCCTTGTGCACTGTGTGTACGACCTTTTATTTCCCACTTTTTCCTCTCCTCCACATTCACCCTGTTATCTCCTATTCTCATTCTTTCTCATAGCTTTTCCACTTTCCATCAGCTATTTCTTATTGTTCATATTAAACAACTACTTCTATAATTTGTGCGAAATTAAACTAGCAAGTAGTAACTTTGTTGTGGAAAGGAGGGAGTATATTTCTTGGGGGGTTGGGGGCTATGTTTGGAATCCATTGTGCTATCCAGGGGGTGGAGACAAGATAAGAATCCCAATTTTAGGTTAACTGACCCTTTAAGTTTTAATCCAGTCTATATATTGCATTTTTCAGGAGGTATAGGAAATGTTTCTCAGCTCTCATGTATTTCAATTAGAATATAGGGGAAGATGAATATCCAGAAGGATAAAGACTACTATCTGTTCATGGTAACTAAACACTTACTGCTTTACTATGTTGGACCAAAACGAAAGACCTTCATGTAGAAACTCCAGCCATTTTGTTTTCTTTTATCAATGGAGCAATTCCAGTCCTTGGAAGAAGAGCCTTTCATGTGAAGTGCTCGTTTCTCAAATCTTAGGTATGCTATATTATCCTCATGGCAGCCGTCTGGCTGTAGTGAATCCATCTTTTCTGAAACTACCAAGTGTCTGTATTGTTAGTGTTCGTGTTCGTTATTAGAATGTGAAAAACAACAACTACTAAGCCAAATCCTTATTCACACTCCTTGTCTCCTCCGATGGCTTCTGTCTGTTGCTACATGCTCTTGCAAATCCACTTTCTTCATGCAGTGAATGTAAAAGCAGGGAAATATGATAAAGAAGGAAAAGAAAAAGAAAAAAAAAGCAATCTTGGATGTTATGCCCCTTTGAGAATTTTTGGTACGCGAAAACTGAGGAATGATGGGAGATTTAAATTTATTTTGTATTGATGCTTCAAGAGTTCAGATGAATCTATTATATTAATCTATATATCTGGAACCTTTGAAATATTGATGTGAATGTTCTTATGTTATATATAGGTCAAGCCTTGGAGTGATGAGCACATTAACTCCAATGGTGACCCATGGAGCAGGCATTCCTCATACGGACCCTCTCCCTCACCCGTACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACGGATGGGTCCAATTTCAACATACTTCATATCTACATCACAATCAAGGACCGGGTTTACCCATGCCCATTAGCAGCAGTGCCGGGAGGTTCGACACTCAAAGAAGCATGCCGAGATTTGTGCCTTCAGGACGAGGATATGAGCCGAATCCAAGTTTCCCTCACTATGCAGAAAGCTCTCCTCCAAATTACTCCCATTCTTGGAGCAGAGATAATGTTCCTCATTTTCAATTGCCATGATGGGTTATATATGTAAATATAAAAGCATTCTCACCTCAAGCTATGAACTCTGGTCACAAATTTGGTCTTTGGTGGATTTTGCTTGAGGTCTTTTGTTGATATACATAGATTATCATGAATGCTGATGACCCTTGTAATGGCATTTTAATCTCGGAGTTCACTGTTGTAAATCTGGAGCATGATTTGTCTCCATGATTTTGTACATTTTGTTAGACTGTATGTATGTATGTTTTCATGATGGATGAAAACTGAAAAAGTAAGTTAAAGTCCACTCTGTTGGCAATTGTATCAAATGAGAAATGCTCATCAGAGAATGAAGACATAAGGCTTGGACAGTTGATCTTTAAACTGTTTTGGAAAAATATTCAGTCCGGAATTAATAGAGTCATATATTGTTTTGACAATATGTTCACATTTCCTACCCTAAACATGTCAT

mRNA sequence

AACAAACCGTTGGTTAGCATGCCAATTTGTATCATGTGAACATCCCTTCTGTCTTTTACAAATGCTTGCGAGCGAGACAATACCCACGAAAGGTACGCACCACGTAACCCCTTACAGGTAACAGGTCAGATAGGGAGAGAATACAGTTAACCCAGAAATCCCAATTTCAAGACATTCATTCCCAATTTCAGAGGCCACCCAAAAAATTATTTTTAAAAAAAAAAGAACAGATAAAAAGAGAATATAATTTTGTCTGTGTGATCATCTTTCTGGGTCTTTAAAAACCCAGATTTTGATCCACAGTTTGGGTGATTCTGGGGTTGCTTTAATTATTCTGGGTTTTTTGGTTTGGAGTTTTTAGAGAGAGAAATTGTGGGGTTTTAATTGATTGTTGTTAGAAATGGTGAGGTCAAAAAACAGTAGTGATCAAGCAATTGATTTGAATGTTGAACCTGAGGAATCTTGTGCTTCTTGCTCTATTTGTCTTGATTTGGTGACCTTTGGTGGGGAAAGATCCAGTGCTAAACTTAATTGTGGCCATGAATTTCATCTGGACTGCATTGGTTCTGCATTCAATATGAAGGGAATGATGCAATGCCCAAACTGCCGGGGAATTGAGAAAGGTCGATGGTTATATGCAAGTGGTTCCACAAATTCATCTCCAGAACTAGGCATGGATGATGGAAGTGTTGATAACTATCCGTTTTACTTCACCTTTGCTGAAATGCCCTATAGAGTTCACGTTTGTCCATTTCGTGGATTCACGCAAGTTCATCCATCTTCTCAGTCAAGCCTTGGAGTGATGAGCACATTAACTCCAATGGTGACCCATGGAGCAGGCATTCCTCATACGGACCCTCTCCCTCACCCGTACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACGGATGGGTCCAATTTCAACATACTTCATATCTACATCACAATCAAGGACCGGGTTTACCCATGCCCATTAGCAGCAGTGCCGGGAGGTTCGACACTCAAAGAAGCATGCCGAGATTTGTGCCTTCAGGACGAGGATATGAGCCGAATCCAAGTTTCCCTCACTATGCAGAAAGCTCTCCTCCAAATTACTCCCATTCTTGGAGCAGAGATAATGTTCCTCATTTTCAATTGCCATGATGGGTTATATATGTAAATATAAAAGCATTCTCACCTCAAGCTATGAACTCTGGTCACAAATTTGGTCTTTGGTGGATTTTGCTTGAGGTCTTTTGTTGATATACATAGATTATCATGAATGCTGATGACCCTTGTAATGGCATTTTAATCTCGGAGTTCACTGTTGTAAATCTGGAGCATGATTTGTCTCCATGATTTTGTACATTTTGTTAGACTGTATGTATGTATGTTTTCATGATGGATGAAAACTGAAAAAGTAAGTTAAAGTCCACTCTGTTGGCAATTGTATCAAATGAGAAATGCTCATCAGAGAATGAAGACATAAGGCTTGGACAGTTGATCTTTAAACTGTTTTGGAAAAATATTCAGTCCGGAATTAATAGAGTCATATATTGTTTTGACAATATGTTCACATTTCCTACCCTAAACATGTCAT

Coding sequence (CDS)

ATGGTGAGGTCAAAAAACAGTAGTGATCAAGCAATTGATTTGAATGTTGAACCTGAGGAATCTTGTGCTTCTTGCTCTATTTGTCTTGATTTGGTGACCTTTGGTGGGGAAAGATCCAGTGCTAAACTTAATTGTGGCCATGAATTTCATCTGGACTGCATTGGTTCTGCATTCAATATGAAGGGAATGATGCAATGCCCAAACTGCCGGGGAATTGAGAAAGGTCGATGGTTATATGCAAGTGGTTCCACAAATTCATCTCCAGAACTAGGCATGGATGATGGAAGTGTTGATAACTATCCGTTTTACTTCACCTTTGCTGAAATGCCCTATAGAGTTCACGTTTGTCCATTTCGTGGATTCACGCAAGTTCATCCATCTTCTCAGTCAAGCCTTGGAGTGATGAGCACATTAACTCCAATGGTGACCCATGGAGCAGGCATTCCTCATACGGACCCTCTCCCTCACCCGTACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACGGATGGGTCCAATTTCAACATACTTCATATCTACATCACAATCAAGGACCGGGTTTACCCATGCCCATTAGCAGCAGTGCCGGGAGGTTCGACACTCAAAGAAGCATGCCGAGATTTGTGCCTTCAGGACGAGGATATGAGCCGAATCCAAGTTTCCCTCACTATGCAGAAAGCTCTCCTCCAAATTACTCCCATTCTTGGAGCAGAGATAATGTTCCTCATTTTCAATTGCCATGA

Protein sequence

MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHTSYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWSRDNVPHFQLP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24745	Spo24745	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24745.1	Spo24745.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24745.1.utr5p.1	Spo24745.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24745.1.CDS.4	Spo24745.1.CDS.4	CDS
Spo24745.1.CDS.3	Spo24745.1.CDS.3	CDS
Spo24745.1.CDS.2	Spo24745.1.CDS.2	CDS
Spo24745.1.CDS.1	Spo24745.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24745.1.utr3p.1	Spo24745.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24745.1.exon.4	Spo24745.1.exon.4	exon
Spo24745.1.exon.3	Spo24745.1.exon.3	exon
Spo24745.1.exon.2	Spo24745.1.exon.2	exon
Spo24745.1.exon.1	Spo24745.1.exon.1	exon

Homology

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BLAST of Spo24745.1 vs. NCBI nr
Match: gi|902188900|gb|KNA11261.1| (hypothetical protein SOVF_136870 [Spinacia oleracea])

HSP 1 Score: 535.4 bits (1378), Expect = 5.300e-149
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM 60
           MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM
Sbjct: 1   MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM 60

Query: 61  KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG 120
           KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG
Sbjct: 61  KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG 120

Query: 121 FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT 180
           FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT
Sbjct: 121 FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT 180

Query: 181 SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS 240
           SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS
Sbjct: 181 SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS 240

Query: 241 RDNVPHFQLP 251
           RDNVPHFQLP
Sbjct: 241 RDNVPHFQLP 250

[Close]

BLAST of Spo24745.1 vs. NCBI nr
Match: gi|731395479|ref|XP_010652188.1| (PREDICTED: uncharacterized protein LOC100267498 isoform X2 [Vitis vinifera])

HSP 1 Score: 163.7 bits (413), Expect = 4.200e-37
Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 1


		  
Query: 16  VEP----EESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRG 75
           VEP    E S  SCSICLDLVT  GERS AKL CGHEFHLDCIGSAFNMKG MQCPNCR 
Sbjct: 9   VEPPSHGEVSFVSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRK 68

Query: 76  IEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPS 128
           IE+GRWL+A+GS  S PE  MDD + D   + F ++EMP+RV  CPF GFTQV  S
Sbjct: 69  IERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSS 124

[Close]

BLAST of Spo24745.1 vs. NCBI nr
Match: gi|225437364|ref|XP_002268579.1| (PREDICTED: uncharacterized protein LOC100267498 isoform X1 [Vitis vinifera])

HSP 1 Score: 163.7 bits (413), Expect = 4.200e-37
Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 1


		  
Query: 16  VEP----EESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRG 75
           VEP    E S  SCSICLDLVT  GERS AKL CGHEFHLDCIGSAFNMKG MQCPNCR 
Sbjct: 19  VEPPSHGEVSFVSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRK 78

Query: 76  IEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPS 128
           IE+GRWL+A+GS  S PE  MDD + D   + F ++EMP+RV  CPF GFTQV  S
Sbjct: 79  IERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSS 134

[Close]

BLAST of Spo24745.1 vs. NCBI nr
Match: gi|1021052391|gb|KZN10169.1| (hypothetical protein DCAR_002825 [Daucus carota subsp. sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.900e-34
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 1


		  
Query: 16  VEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEKG 75
           ++   S  SCSICLDLV    ERS AKL CGHEFHLDCIGSAFNMKG MQCPNCR IE G
Sbjct: 1   MDDSNSLNSCSICLDLVADSKERSVAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIEGG 60

Query: 76  RWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPS 128
           RWLYA+GS+ S P+ G+DD +    PF ++F EMP+ VH CPF   T VH S
Sbjct: 61  RWLYANGSSRSLPDFGVDDWTFSEEPFEYSFPEMPFGVHWCPFSRLTGVHSS 112

[Close]

BLAST of Spo24745.1 vs. NCBI nr
Match: gi|568852561|ref|XP_006479943.1| (PREDICTED: uncharacterized protein LOC102624227 [Citrus sinensis])

HSP 1 Score: 152.5 bits (384), Expect = 9.600e-34
Identity = 76/134 (56.72%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 13  DLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGI 72
           D ++EP  S  +CSICLDLV+  G RS AKL CGHEFHLDCIGSAFNMKG MQCPNCR I
Sbjct: 22  DDDIEPS-SGLACSICLDLVSENGIRSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRRI 81

Query: 73  EKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPSSQSSL 132
           EKG+WLYA+GST S PEL M+D   D   +  +++EMP+RVH CPF  F Q+  S +   
Sbjct: 82  EKGQWLYANGSTRSLPELSMEDWIPDEDFYDLSYSEMPFRVHWCPFGEFAQLGSSFEEVE 141

Query: 133 GVMSTLTPMVTHGA 147
              +T   +  H A
Sbjct: 142 PPSTTYHDLRGHNA 154

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BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXL9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136870 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 3.700e-149
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM 60
           MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM
Sbjct: 1   MVRSKNSSDQAIDLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNM 60

Query: 61  KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG 120
           KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG
Sbjct: 61  KGMMQCPNCRGIEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRG 120

Query: 121 FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT 180
           FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT
Sbjct: 121 FTQVHPSSQSSLGVMSTLTPMVTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHT 180

Query: 181 SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS 240
           SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS
Sbjct: 181 SYLHHNQGPGLPMPISSSAGRFDTQRSMPRFVPSGRGYEPNPSFPHYAESSPPNYSHSWS 240

Query: 241 RDNVPHFQLP 251
           RDNVPHFQLP
Sbjct: 241 RDNVPHFQLP 250

[Close]

BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Match: D7U291_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00420 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.900e-37
Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 1


		  
Query: 16  VEP----EESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRG 75
           VEP    E S  SCSICLDLVT  GERS AKL CGHEFHLDCIGSAFNMKG MQCPNCR 
Sbjct: 9   VEPPSHGEVSFVSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRK 68

Query: 76  IEKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPS 128
           IE+GRWL+A+GS  S PE  MDD + D   + F ++EMP+RV  CPF GFTQV  S
Sbjct: 69  IERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSS 124

[Close]

BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Match: A0A166HF28_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002825 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.300e-34
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 1


		  
Query: 16  VEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEKG 75
           ++   S  SCSICLDLV    ERS AKL CGHEFHLDCIGSAFNMKG MQCPNCR IE G
Sbjct: 1   MDDSNSLNSCSICLDLVADSKERSVAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIEGG 60

Query: 76  RWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPS 128
           RWLYA+GS+ S P+ G+DD +    PF ++F EMP+ VH CPF   T VH S
Sbjct: 61  RWLYANGSSRSLPDFGVDDWTFSEEPFEYSFPEMPFGVHWCPFSRLTGVHSS 112

[Close]

BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Match: V4U5U2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020382mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.700e-34
Identity = 76/134 (56.72%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 13  DLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGI 72
           D ++EP  S  +CSICLDLV+  G RS AKL CGHEFHLDCIGSAFNMKG MQCPNCR I
Sbjct: 22  DDDIEPS-SGLACSICLDLVSENGIRSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRRI 81

Query: 73  EKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPSSQSSL 132
           EKG+WLYA+GST S PEL M+D   D   +  +++EMP+RVH CPF  F Q+  S +   
Sbjct: 82  EKGQWLYANGSTRSLPELSMEDWIPDEDFYDLSYSEMPFRVHWCPFGEFAQLGSSFEEVE 141

Query: 133 GVMSTLTPMVTHGA 147
              +T   +  H A
Sbjct: 142 PPSTTYHDLRGHNA 154

[Close]

BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Match: A0A067HGU4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015207mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.700e-34
Identity = 76/134 (56.72%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 13  DLNVEPEESCASCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGI 72
           D ++EP  S  +CSICLDLV+  G RS AKL CGHEFHLDCIGSAFNMKG MQCPNCR I
Sbjct: 22  DDDIEPS-SGLACSICLDLVSENGIRSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRRI 81

Query: 73  EKGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPSSQSSL 132
           EKG+WLYA+GST S PEL M+D   D   +  +++EMP+RVH CPF  F Q+  S +   
Sbjct: 82  EKGQWLYANGSTRSLPELSMEDWIPDEDFYDLSYSEMPFRVHWCPFGEFAQLGSSFEEVE 141

Query: 133 GVMSTLTPMVTHGA 147
              +T   +  H A
Sbjct: 142 PPSTTYHDLRGHNA 154

[Close]

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Match: AT2G47700.1 (RING/U-box superfamily protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.500e-29
Identity = 83/208 (39.90%), Postives = 105/208 (50.48%), Query Frame = 1


		  
Query: 18  PEESCA----SCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIE 77
           PE+S +    SCSICL+ V   G RS AKL CGH+FHLDCIGSAFNMKG MQCPNCR +E
Sbjct: 27  PEDSSSPVEVSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVE 86

Query: 78  KGRWLYASGSTNSSPELGMDDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHPSSQSSLG 137
           KG+WLYA+GST   PE  M+D   +   +  ++ EM YRVH CPF   +Q   S +    
Sbjct: 87  KGQWLYANGSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQAAASFEELEP 146

Query: 138 VMSTLTPMV--THGAGIPHT-----DPLPHPYPHPHPHPHPHPHPHGWVQFQHTSYL--- 197
             +T        H A + H+      P P   P    +     HP       H   L   
Sbjct: 147 ATTTYHTEFHGHHAAAVNHSYLAYVGPGPAATPRTSDNNSTDDHPWNSHSNDHFHQLPVA 206

Query: 198 --HHNQGPGLPMP--------ISSSAGR 202
             +H+  P   +P        + SSA R
Sbjct: 207 PQYHHHSPSFSLPAAHVVDGEVDSSAAR 234

[Close]

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Match: AT3G05545.1 (RING/U-box superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.200e-20
Identity = 77/212 (36.32%), Postives = 107/212 (50.47%), Query Frame = 1


		  
Query: 24  SCSICLDLVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEKGRWLYASGS 83
           +CSICL+ V   G+R+ A L C H+FHLDCIGSAFN KG+MQCPNCR +EKG+WLYA+G 
Sbjct: 36  ACSICLETVVKNGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANG- 95

Query: 84  TNSSPELGMDDGSVDNYPFY--FTFAEMPYRVHVCPFRGFTQVHPSSQSSLGVMSTLTPM 143
             S PE  ++D  V     Y    ++EM + VH CPF G +   PS +   G  S  +  
Sbjct: 96  CRSYPEFNVEDW-VHEEDIYDIGAYSEMSFGVHWCPF-GSSARLPSFED--GEFSPSSYH 155

Query: 144 VTHGAGIPHTDPLPHPYPHPHPHPHPHPHPHGWVQFQHTSYLHHNQGPGLPMPISSSAGR 203
              G    +T+P      HP P+       H        S    + G       SS +  
Sbjct: 156 DLLGQQGYYTEPAAPTAGHPCPYVTYFGPVH--------SPSSSSGGAAGVSDSSSFSSH 215

Query: 204 FDTQRSMPRFVPSGRGYEPNPSFPHYAESSPP 234
           ++T  S+   VP+  G+  +P +  +    PP
Sbjct: 216 WNTGSSVSGEVPTPYGFPVDPHYHGWDYHPPP 234

[Close]

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Match: AT2G15260.1 (RING/U-box superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.500e-16
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 1


		  
Query: 25  CSICLDLVTFGGE--RSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEKGRWLYASG 84
           CSIC   +    +  R+   L C H+FHLDCIGSA+N KG M+CPNCR IE G W ++ G
Sbjct: 123 CSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCRNIEPGHWQFSDG 182

Query: 85  STNSSPELGM----DDGSVDNYPFYFTFAEMPYRVHVCPFRGFTQVHP 127
            T+ +P  GM    ++   DN P   +F++M  +  VCPF    Q +P
Sbjct: 183 -THFNPN-GMIANNEEEEEDNDP--GSFSQMIVKSEVCPFGCLGQRYP 226

[Close]

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Match: AT4G13490.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 2.100e-15
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1


		  
Query: 16 VEPEESCASCSICLD-LVTFGGERSSAKLNCGHEFHLDCIGSAFNMKGMMQCPNCRGIEK 75
          VEP +    C++CL+ L     ER+  KL C H+FHLDC+GS+FN+K  M+CP CR IEK
Sbjct: 14 VEPFDD-DDCAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQIEK 73

Query: 76 GRWLYA 81
          G+WL+A
Sbjct: 74 GKWLFA 78

[Close]

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Match: AT3G18535.1 (tubulin-tyrosine ligases)

HSP 1 Score: 48.5 bits (114), Expect = 6.900e-6
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1


		  
Query: 144 HGAGIPHTDPLPHPYPHPHPHPHPHPHPH 173
           H   +PH  P PHP+PHPHPHPHPHPHPH
Sbjct: 227 HRHRLPHPHPHPHPHPHPHPHPHPHPHPH 255

The following BLAST results are available for this feature:

BLAST of Spo24745.1 vs. NCBI nr
BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
BLAST of Spo24745.1 vs. ExPASy Swiss-Prot
BLAST of Spo24745.1 vs. TAIR (Arabidopsis)

BLAST of Spo24745.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902188900\|gb\|KNA11261.1\|	5.3e-149	100.	hypothetical protein SOVF_1368...	[more]
gi\|731395479\|ref\|XP_010652188.1\|	4.2e-37	67.2	PREDICTED: uncharacterized pro...	[more]
gi\|225437364\|ref\|XP_002268579.1\|	4.2e-37	67.2	PREDICTED: uncharacterized pro...	[more]
gi\|1021052391\|gb\|KZN10169.1\|	1.9e-34	63.3	hypothetical protein DCAR_0028...	[more]
gi\|568852561\|ref\|XP_006479943.1\|	9.6e-34	56.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24745.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXL9_SPIOL	3.7e-149	100.	Uncharacterized protein OS=Spi...	[more]
D7U291_VITVI	2.9e-37	67.2	Putative uncharacterized prote...	[more]
A0A166HF28_DAUCA	1.3e-34	63.3	Uncharacterized protein OS=Dau...	[more]
V4U5U2_9ROSI	6.7e-34	56.7	Uncharacterized protein OS=Cit...	[more]
A0A067HGU4_CITSI	6.7e-34	56.7	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo24745.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24745.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G47700.1	1.5e-29	39.9	RING/U-box superfamily protein	[more]
AT3G05545.1	2.2e-20	36.3	RING/U-box superfamily protein	[more]
AT2G15260.1	2.5e-16	42.5	RING/U-box superfamily protein	[more]
AT4G13490.1	2.1e-15	53.0	RING/U-box superfamily protein	[more]
AT3G18535.1	6.9e-6	72.4	tubulin-tyrosine ligases	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 24..70 score: 3.
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 25..69 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 25..70 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 22..70 score: 6.7
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 23..128 score: 9.9
None	No IPR available	PANTHER	PTHR22937:SF37	SUBFAMILY NOT NAMED	coord: 23..128 score: 9.9
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 20..71 score: 1.24

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding