Spo24638.1 (mRNA) | SpinachBase

Overview


Name	Spo24638.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Elongation factor Tu
Location	SpoScf_06516 : 18 .. 1989 (-)
Sequence length	549

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGAAAAGGATTGATGGAGCAGGACTTGAGCAAGTTGGATGTGGCAAAATTACATCCTCTTTCGCCTGAAGTTATTTCTCGCCAGGCTACAATTAACATTGGTAATATACACATTAGTTATAAATGTACACAGACAATGCTGCCTGCTTAGTTTTGCTTACAAATTTGAAAATTTTCCTTCATAATATTTTTAGGAACTATTGGTCATGTGGCCCATGGAAAGTCGACAGTTGTGAAGGCTATTTCTGGTGTTCAGGTGATTTTTGCCCGCCTACTCTCCCAAATATGACATGGGAGTTTCATTTCCAAAATTTCATGGTGGAGTTTTTTTCTTCAGGGAATTAGAAAGGGATCTAACTGAGTAACTGAAACTAGGTGGTGGGGGATTCGTGTGTTTGTTCAACTTGTTGGTGCAGATGTTTTTAGTATATTACTCCATCCTTTCCTAAATTAGTTTCCACTATTCTATTTCGTGAGTTCCCCAATAAGTGTTTGTTTTTATTTTTGAACATACACTTTTCTTACTTTTACATAAATCATTGCTTTTTCTTACACATTCTACATTTTTCCCACTTTTCTATCTTCACATCCAATTTTATTTGTACTTTACCAATAAACAATGATCTACTTTATCCTTTCCCAAGAAAAATCACTCATAATCATTGTATTCTTACCACTTTTCAATTTTCTTAATTACCGTGAATTCTCTCAAAGTGGACACTTATTTAGGAACAAAGAGAGTATCTAGCATGGGGTGGGCAAGTGCTGGTTATTCTTGTTGTTGTGGTTTAGGTGAATGCTTGTTTAGTGTTGTGCTTTACATCCTTCAAGATCTCTTATGATATATTTCTCTTATGCAGACTGTACGGTTTAAGAATGAGTTGGAGCGTAATATTACTATCAAGCTTGGTTATGCTAATGCCAAGATATATAAATGTGATGATGAACGGTGTCCACGACCTATGACCTATAAGTAAGTTATCTGTTTCACCTTGGCAATCTCATGATCCATTGATGTGATGAAATGTCTTTATTTCCTTGTTGCTTTGCTTGTGACTTTTTTGTTTCTTGTGTTGAGAGCTTCTTAGCTCAACATTCATGAATTTGCTAGATTCTTGTGCCAGAACCAGTATAATTGCTTGATGAAGATACCCGAGTGACGTTATTTTGTTGAAATTGCATTTTGTATGTTGCAATTTCGCGTTTGTTGTTGAGATATTATTCCCCACACTGTTTTTGCAGGTCATATGGAAGTGGAAAGGAAGACACTCCAATGTGTGACGTGCCTGGATTTGAGAATGCCAAGATGAAGCTTCTGAGACATGTGTCATTTGTCGATTGCCCAGTAAGTTTGATTTACTTGGGGGATATTTGGGCAATTCTCTCAGTTCGTTGGTGTGCCATTGATTTCCTATTGATTTTCCTTTTGATATTTGCAAATGTCTCTATTACTTGGTTGTTTTTTACTTCCTTTAATGAACTGTTGTGGCTTATCCAACAGTCATTATTCAATTGTATTAATTTTGTAAAACCTTGTGTTAATAATAATCTTTTTTGGCGTACTCTAGCTTTATTTTATTTTTTTCCATATTTATCTAGAAAGCTTAAATTTAAGATTCCTATATTCTTGAAAATCATGTGGGAGCTCAATGGTAAATCTCTTACCTCCAACCTTAAAATAGGAATTCGATTCTCATCTCTCCCACCCTAGTTTGGTAAGTTGTGTTTTTAACCTAGAGCATTTTTGTTTACAGAAATCTAAATATTGGTTGATTTATATATTTTGAAATTGTTCGTGCCAGGGTCATGATATTCTTATGGCTACTATGCTTAATGGAGCTGCAATTATGGATGGAGCACTACTTCTTATTGCTGCTAATGAGAGCTGCCCCCAACCCCAGACTTCTGAGCATCTTGCTGCTATTGAGATCATGCGACTTCAGCACATTATCATCCTCCAAAATAAA

mRNA sequence

ATGGCACGAAAAGGATTGATGGAGCAGGACTTGAGCAAGTTGGATGTGGCAAAATTACATCCTCTTTCGCCTGAAGTTATTTCTCGCCAGGCTACAATTAACATTGGAACTATTGGTCATGTGGCCCATGGAAAGTCGACAGTTGTGAAGGCTATTTCTGGTGTTCAGACTGTACGGTTTAAGAATGAGTTGGAGCGTAATATTACTATCAAGCTTGGTTATGCTAATGCCAAGATATATAAATGTGATGATGAACGGTGTCCACGACCTATGACCTATAAGTCATATGGAAGTGGAAAGGAAGACACTCCAATGTGTGACGTGCCTGGATTTGAGAATGCCAAGATGAAGCTTCTGAGACATGTGTCATTTGTCGATTGCCCAGGTCATGATATTCTTATGGCTACTATGCTTAATGGAGCTGCAATTATGGATGGAGCACTACTTCTTATTGCTGCTAATGAGAGCTGCCCCCAACCCCAGACTTCTGAGCATCTTGCTGCTATTGAGATCATGCGACTTCAGCACATTATCATCCTCCAAAATAAA

Coding sequence (CDS)

ATGGCACGAAAAGGATTGATGGAGCAGGACTTGAGCAAGTTGGATGTGGCAAAATTACATCCTCTTTCGCCTGAAGTTATTTCTCGCCAGGCTACAATTAACATTGGAACTATTGGTCATGTGGCCCATGGAAAGTCGACAGTTGTGAAGGCTATTTCTGGTGTTCAGACTGTACGGTTTAAGAATGAGTTGGAGCGTAATATTACTATCAAGCTTGGTTATGCTAATGCCAAGATATATAAATGTGATGATGAACGGTGTCCACGACCTATGACCTATAAGTCATATGGAAGTGGAAAGGAAGACACTCCAATGTGTGACGTGCCTGGATTTGAGAATGCCAAGATGAAGCTTCTGAGACATGTGTCATTTGTCGATTGCCCAGGTCATGATATTCTTATGGCTACTATGCTTAATGGAGCTGCAATTATGGATGGAGCACTACTTCTTATTGCTGCTAATGAGAGCTGCCCCCAACCCCAGACTTCTGAGCATCTTGCTGCTATTGAGATCATGCGACTTCAGCACATTATCATCCTCCAAAATAAA

Protein sequence

MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24638	Spo24638	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24638.1	Spo24638.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24638.1.CDS.5	Spo24638.1.CDS.5	CDS
Spo24638.1.CDS.4	Spo24638.1.CDS.4	CDS
Spo24638.1.CDS.3	Spo24638.1.CDS.3	CDS
Spo24638.1.CDS.2	Spo24638.1.CDS.2	CDS
Spo24638.1.CDS.1	Spo24638.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24638.1.exon.5	Spo24638.1.exon.5	exon
Spo24638.1.exon.4	Spo24638.1.exon.4	exon
Spo24638.1.exon.3	Spo24638.1.exon.3	exon
Spo24638.1.exon.2	Spo24638.1.exon.2	exon
Spo24638.1.exon.1	Spo24638.1.exon.1	exon

Homology

[Close]

BLAST of Spo24638.1 vs. NCBI nr
Match: gi|902213507|gb|KNA17279.1| (hypothetical protein SOVF_081440 [Spinacia oleracea])

HSP 1 Score: 368.6 bits (945), Expect = 6.200e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. NCBI nr
Match: gi|902223262|gb|KNA19404.1| (hypothetical protein SOVF_061980 [Spinacia oleracea])

HSP 1 Score: 365.9 bits (938), Expect = 4.000e-98
Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDDERCPRPM+YK+YGSGKEDTPMCDVPGFENAKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMSYKAYGSGKEDTPMCDVPGFENAKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. NCBI nr
Match: gi|731363039|ref|XP_010693213.1| (PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.8 bits (930), Expect = 3.400e-97
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDD+RCPRPM YK+YGSGKEDTPMCDVPGFENA+MKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDDRCPRPMCYKAYGSGKEDTPMCDVPGFENARMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. NCBI nr
Match: gi|586697105|ref|XP_006844119.1| (PREDICTED: eukaryotic translation initiation factor 2 subunit gamma [Amborella trichopoda])

HSP 1 Score: 358.2 bits (918), Expect = 8.400e-96
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+RKGLMEQDLSKLDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKC+DERCPRPM YK+YGSGKEDTP+CDVPGFENA+MKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDTPLCDVPGFENARMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAA+EIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. NCBI nr
Match: gi|502089140|ref|XP_004488828.1| (PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Cicer arietinum])

HSP 1 Score: 358.2 bits (918), Expect = 8.400e-96
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+RKGLMEQDLSKLDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKC+DERCPRPM+YK+YGSGKED PMCDVPGFEN+KMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDNPMCDVPGFENSKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAA+EIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE73_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081440 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.300e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKF3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_061980 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.800e-98
Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDDERCPRPM+YK+YGSGKEDTPMCDVPGFENAKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMSYKAYGSGKEDTPMCDVPGFENAKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BCZ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046500 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.400e-97
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKCDD+RCPRPM YK+YGSGKEDTPMCDVPGFENA+MKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCDDDRCPRPMCYKAYGSGKEDTPMCDVPGFENARMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Match: W1PDL6_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00006p00256440 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 5.900e-96
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+RKGLMEQDLSKLDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKC+DERCPRPM YK+YGSGKEDTP+CDVPGFENA+MKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDTPLCDVPGFENARMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAA+EIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Match: A0A0B2R7H5_GLYSO (Eukaryotic translation initiation factor 2 subunit 3 OS=Glycine soja GN=glysoja_025537 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 7.700e-96
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 1


		  
Query: 1   MARKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+RKGLMEQDLSKLDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLR 120
           KNELERNITIKLGYANAKIYKC+DERCPRPM YK+YGSGKED+PMCDVPGFEN+KMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDSPMCDVPGFENSKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAA+EIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNK 184
           QNK
Sbjct: 181 QNK 183

[Close]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Match: IF2G_DROME (Eukaryotic translation initiation factor 2 subunit 3 OS=Drosophila melanogaster GN=eIF-2gamma PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.000e-73
Identity = 140/180 (77.78%), Postives = 156/180 (86.67%), Query Frame = 1


		  
Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           + L +QDLS LDV+KL PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE
Sbjct: 12  RNLQKQDLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 71

Query: 64  LERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVS 123
           LERNITIKLGYANAKIYKCD+ +CPRP ++ S  S K+D+  C      +   +L+RHVS
Sbjct: 72  LERNITIKLGYANAKIYKCDNPKCPRPASFVSDASSKDDSLPCTRLNC-SGNFRLVRHVS 131

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 183
           FVDCPGHDILMATMLNGAA+MD ALLLIA NESCPQPQTSEHLAAIEIM+L+ I+ILQNK
Sbjct: 132 FVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKQILILQNK 190

[Close]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Match: IF2G_SCHPO (Eukaryotic translation initiation factor 2 subunit gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif213 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.600e-73
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 1


		  
Query: 14  LDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLG 73
           LD+++L P+ P +ISRQATINIGTIGHVAHGKSTVVKAISGV TVRFKNELERNITIKLG
Sbjct: 5   LDISELSPIHPAIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLG 64

Query: 74  YANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFVDCPGHDIL 133
           YANAKIYKC +E CPRP  Y+SY S KED P C++    N+ M L+RHVSFVDCPGHDIL
Sbjct: 65  YANAKIYKCSNEECPRPGCYRSYSSNKEDHPPCEIC---NSPMNLVRHVSFVDCPGHDIL 124

Query: 134 MATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
           MATMLNGAA+MD ALLLIA NESCPQPQTSEHLAAIEIM+L+HIIILQNK
Sbjct: 125 MATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNK 171

[Close]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Match: IF2G_CHICK (Eukaryotic translation initiation factor 2 subunit 3 OS=Gallus gallus GN=EIF2S3 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.600e-73
Identity = 142/178 (79.78%), Postives = 150/178 (84.27%), Query Frame = 1


		  
Query: 6   LMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 65
           L  QDL+ LDV KL PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGV TVRFKNELE
Sbjct: 15  LSRQDLATLDVTKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELE 74

Query: 66  RNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFV 125
           RNITIKLGYANAKIYK DD  C RP  Y+S GS   D    D+PG      KL+RHVSFV
Sbjct: 75  RNITIKLGYANAKIYKLDDPSCSRPECYRSCGSSTPDEFPTDIPG-TKGNFKLVRHVSFV 134

Query: 126 DCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
           DCPGHDILMATMLNGAA+MD ALLLIA NESCPQPQTSEHLAAIEIM+L+HI+ILQNK
Sbjct: 135 DCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNK 191

[Close]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Match: IF2G_BOVIN (Eukaryotic translation initiation factor 2 subunit 3 OS=Bos taurus GN=EIF2S3 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.600e-73
Identity = 142/178 (79.78%), Postives = 151/178 (84.83%), Query Frame = 1


		  
Query: 6   LMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 65
           L  QDL+ LDV+KL PLS EVISRQATINIGTIGHVAHGKSTVVKAISGV TVRFKNELE
Sbjct: 15  LSRQDLATLDVSKLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELE 74

Query: 66  RNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFV 125
           RNITIKLGYANAKIYK DD  CPRP  Y+S GS   D    D+PG      KL+RHVSFV
Sbjct: 75  RNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPG-TKGNFKLVRHVSFV 134

Query: 126 DCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
           DCPGHDILMATMLNGAA+MD ALLLIA NESCPQPQTSEHLAAIEIM+L+HI+ILQNK
Sbjct: 135 DCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNK 191

[Close]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Match: IF2G_RAT (Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus GN=Eif2s3 PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 3.400e-73
Identity = 142/178 (79.78%), Postives = 150/178 (84.27%), Query Frame = 1


		  
Query: 6   LMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 65
           L  QDL+ LDV KL PLS EVISRQATINIGTIGHVAHGKSTVVKAISGV TVRFKNELE
Sbjct: 15  LSRQDLATLDVTKLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELE 74

Query: 66  RNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFV 125
           RNITIKLGYANAKIYK DD  CPRP  Y+S GS   D    D+PG      KL+RHVSFV
Sbjct: 75  RNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPG-TKGNFKLVRHVSFV 134

Query: 126 DCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
           DCPGHDILMATMLNGAA+MD ALLLIA NESCPQPQTSEHLAAIEIM+L+HI+ILQNK
Sbjct: 135 DCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNK 191

[Close]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Match: AT1G04170.1 (eukaryotic translation initiation factor 2 gamma subunit)

HSP 1 Score: 340.5 bits (872), Expect = 6.400e-94
Identity = 166/180 (92.22%), Postives = 174/180 (96.67%), Query Frame = 1


		  
Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL KLDV  LHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE
Sbjct: 5   KGLAEQDLKKLDVTVLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 64

Query: 64  LERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVS 123
           LERNITIKLGYANAKIYKC+DE+CPRPM YK+YGSGKEDTP CDVPGFEN+KMKLLRHVS
Sbjct: 65  LERNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLLRHVS 124

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 183
           FVDCPGHDILMATMLNGAAIMDGALLLIAANE+CPQPQTSEHLAA+EIM+L+HIIILQNK
Sbjct: 125 FVDCPGHDILMATMLNGAAIMDGALLLIAANETCPQPQTSEHLAAVEIMQLKHIIILQNK 184

[Close]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Match: AT4G18330.2 (Translation elongation factor EF1A/initiation factor IF2gamma family protein)

HSP 1 Score: 327.8 bits (839), Expect = 4.300e-90
Identity = 158/180 (87.78%), Postives = 170/180 (94.44%), Query Frame = 1


		  
Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL+KLDV KLHPL PEVISRQATINIGTIGHVAHGKST+VKAISGVQTVRFKNE
Sbjct: 11  KGLAEQDLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNE 70

Query: 64  LERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVS 123
           LERNITIKLGYANAKIYKC+D++CPRPM YKSYGSGKED P CDVPGFEN KM L RHVS
Sbjct: 71  LERNITIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVS 130

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 183
            VDCPGHDILMATMLNGAAI+DGALLLIAANESCPQPQT+EHLA++++MRL+HIIILQNK
Sbjct: 131 CVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNK 190

[Close]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Match: AT2G18720.1 (Translation elongation factor EF1A/initiation factor IF2gamma family protein)

HSP 1 Score: 308.5 bits (789), Expect = 2.700e-84
Identity = 150/180 (83.33%), Postives = 167/180 (92.78%), Query Frame = 1


		  
Query: 4   KGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDLSKLDVA+LHPLSPEVISRQATINIGTIGHVAHGKST+VKA+SGV TV+FK+E
Sbjct: 10  KGLAEQDLSKLDVAQLHPLSPEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSE 69

Query: 64  LERNITIKLGYANAKIYKCDDERCPRPMTYKSYGSGKEDTPMCDVPGFENAKMKLLRHVS 123
           LERNITIKLGYANAKIYKC  E+CPRP+ YKS+GSGKED P CDV G E  KMKLLRHVS
Sbjct: 70  LERNITIKLGYANAKIYKC--EKCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVS 129

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 183
           FVDCPGHDILMATMLNGAAIMDGALL+IAANE+CPQPQT+EHLA++++M L+ III+QNK
Sbjct: 130 FVDCPGHDILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVDMMHLKDIIIIQNK 187

[Close]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Match: AT4G20360.1 (RAB GTPase homolog E1B)

HSP 1 Score: 65.5 bits (158), Expect = 4.000e-11
Identity = 46/151 (30.46%), Postives = 70/151 (46.36%), Query Frame = 1


		  
Query: 33  INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDDERCPRPMT 92
           +NIGTIGHV HGK+T+  A+                T+ L    + + K  DE    P  
Sbjct: 80  VNIGTIGHVDHGKTTLTAAL----------------TMALASIGSSVAKKYDEIDAAPEE 139

Query: 93  YKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIA 152
                  +  T       +E       RH + VDCPGH   +  M+ GAA MDGA+L+++
Sbjct: 140 -----RARGITINTATVEYETEN----RHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 199

Query: 153 ANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
             +  P PQT EH+   + + +  +++  NK
Sbjct: 200 GADG-PMPQTKEHILLAKQVGVPDMVVFLNK 204

[Close]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Match: AT4G02930.1 (GTP binding Elongation factor Tu family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.000e-6
Identity = 44/155 (28.39%), Postives = 68/155 (43.87%), Query Frame = 1


		  
Query: 33  INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDDERCPRPMT 92
           +N+GTIGHV HGK+T+  AI+ V     K +           A  +I K  +E+  R +T
Sbjct: 68  VNVGTIGHVDHGKTTLTAAITKVLAEEGKAK---------AIAFDEIDKAPEEK-KRGIT 127

Query: 93  ----YKSYGSGKEDTPMCDVPGFENAKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGAL 152
               +  Y + K      D PG          H  +V           M+ GAA MDG +
Sbjct: 128 IATAHVEYETAKRHYAHVDCPG----------HADYV---------KNMITGAAQMDGGI 187

Query: 153 LLIAANESCPQPQTSEHLAAIEIMRLQHIIILQNK 184
           L+++  +  P PQT EH+     + +  ++   NK
Sbjct: 188 LVVSGPDG-PMPQTKEHILLARQVGVPSLVCFLNK 192

The following BLAST results are available for this feature:

BLAST of Spo24638.1 vs. NCBI nr
BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
BLAST of Spo24638.1 vs. TAIR (Arabidopsis)

BLAST of Spo24638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902213507\|gb\|KNA17279.1\|	6.2e-99	100.	hypothetical protein SOVF_0814...	[more]
gi\|902223262\|gb\|KNA19404.1\|	4.0e-98	98.9	hypothetical protein SOVF_0619...	[more]
gi\|731363039\|ref\|XP_010693213.1\|	3.4e-97	97.8	PREDICTED: eukaryotic translat...	[more]
gi\|586697105\|ref\|XP_006844119.1\|	8.4e-96	95.6	PREDICTED: eukaryotic translat...	[more]
gi\|502089140\|ref\|XP_004488828.1\|	8.4e-96	95.6	PREDICTED: eukaryotic translat...	[more]

BLAST of Spo24638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RE73_SPIOL	4.3e-99	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RKF3_SPIOL	2.8e-98	98.9	Uncharacterized protein OS=Spi...	[more]
A0A0J8BCZ0_BETVU	2.4e-97	97.8	Uncharacterized protein OS=Bet...	[more]
W1PDL6_AMBTC	5.9e-96	95.6	Uncharacterized protein OS=Amb...	[more]
A0A0B2R7H5_GLYSO	7.7e-96	95.6	Eukaryotic translation initiat...	[more]

BLAST of Spo24638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
IF2G_DROME	2.0e-73	77.7	Eukaryotic translation initiat...	[more]
IF2G_SCHPO	2.6e-73	80.0	Eukaryotic translation initiat...	[more]
IF2G_CHICK	2.6e-73	79.7	Eukaryotic translation initiat...	[more]
IF2G_BOVIN	2.6e-73	79.7	Eukaryotic translation initiat...	[more]
IF2G_RAT	3.4e-73	79.7	Eukaryotic translation initiat...	[more]

BLAST of Spo24638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G04170.1	6.4e-94	92.2	eukaryotic translation initiat...	[more]
AT4G18330.2	4.3e-90	87.7	Translation elongation factor ...	[more]
AT2G18720.1	2.7e-84	83.3	Translation elongation factor ...	[more]
AT4G20360.1	4.0e-11	30.4	RAB GTPase homolog E1B	[more]
AT4G02930.1	1.0e-6	28.3	GTP binding Elongation factor ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 34..47 score: 2.4E-11coord: 139..150 score: 2.4E-11coord: 177..183 score: 2.4E-11coord: 123..133 score: 2.4
IPR000795	Transcription factor, GTP-binding domain	PROFILE	PS51722	G_TR_2	coord: 30..183 score: 27
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 24..183 score: 6.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 120..183 score: 1.88E-27coord: 22..81 score: 1.88
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 120..183 score: 1.6E-94coord: 16..83 score: 1.6
None	No IPR available	PANTHER	PTHR23115:SF164	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3	coord: 120..183 score: 1.6E-94coord: 16..83 score: 1.6
None	No IPR available	PFAM	PF00009	GTP_EFTU	coord: 32..183 score: 2.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003743	translation initiation factor activity