Spo24325.1 (mRNA) | SpinachBase

Overview


Name	Spo24325.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	La-related protein 6 isoform 1
Location	SpoScf_00067 : 312268 .. 315831 (-)
Sequence length	1096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGACAAAATTCTTGGAAAAATCTATCATCCATAATCCATCTGCCACGTAGGAATATTGTTTATCATGGAAAATTGAGAATTCCAAATAGAAATGAGCACCAAAAATAAGTAGAAAATATTGAACCTGTTAACATTCTTTGTTTCACTGAAATTTGAAGTAGAAATTTGTTCTCATTTGAAATATGATAATGGGATCTTTACAGAAGAGCTTCTTCTCAAACCCACTACTAATCCAAACCCAGAATCACATTCACAGAAGAACCCCGAATTCTTTTTTCATTGTTTCCTGCAAACTCCCACCAAATGATCACCAAAATCAACCTGATACTTCTAGGTAAACTTTTCTACTTTTTTTGAACTTTTTCATGGTTAATTCTGGGTTATTTTGTTTAGATGGCTCTTGGTAAGTTGGATTGTTAATTTTGGAAAATCAAAGTGATTTTTCAGTGTAAAAATGGCTAATTTTCTTGCTTTCTGTTAGTTGGTCTTTTTTTTCCTGGTAATTTCTTGCATAGTTCATTTTTGTGTTTTTTTTTTTTTGTGTGAAATCAAAGTGATTTTTGAGGGTTCAATTGGTTAATTTCTGGTTTTTTTGGGGATTTTGTTCTTGGTAATTTCATGAATAGTAGTTAGCCTTTGCGTGGATTTTGGGGAACTCAAAGTGAATTTCCAGGGTAAAATGGCTAATAACTTGATTTCTGTTTTAGGGTATTTTAAATTTCCTGGTAATTTCAAAGTTTCAACTTTCTTGAGATAGATTCATGAATTTGTTTCAATGTTATTTGGGTGGTCAGGAAAATAGAGAAGCAGCTGGCAAAGTTAGCAATAGTGACATTGGCAGCAGGAGTATTGACTCTAGGATCAGTTGGTGATGCTTCAGCTGCCAAATCTGGTGGTCGTATTGGTGGTCAGGCTTTTCGCTCTTCTGCTCCTCGTCCCTCGTCTCCTAGAGTTAATTCTAGGTAATCTAACATTCTAATTCCATGGACTATACTTAAATATCTCCCTTGATTGTCTTGTAAACTTGATGCATTGTGAATAAGGTGTGTAATATAATGGAAATGGTCAGTTTGCTACTTTAGCCTGTAAGGGTAAGATTGCTTACATCTTATACTACCGGTGATGCTGGTTGTAGCCTTGTGCACTCAGTTATGTTACTTATGTATAATGGAAGTCGGACATATTTTCATATGATGTTGTCTTTGTTGTTTATATTGTGTTGATGTAATGATGTCTTGATCAACTTATTTGTGAGGGAGAGTAATTCATTTCTTTACTTAAACACATTCAGTGCCCTGCTTCCTCTGATGTTGTGTTGCTTGCTTATGAGTATATTAGAGCATCCATTGACCACATGGCACATGCAATAAAACATTGGCGCGCTTTTATACCACTCCCATTCTGTAGCAGCTCTCCCATTATCCTAGGTCTTCATGACTTTCTTTGACATCTCAGTTAGAGTTCAGCCTATCAGTGCTTATCCCATTTGACAGTAGAGTCATCGTCTCATTTACTTCTAAATTGAGCCATGACATGTTGGAGTATCTCTTTCTAAATTCTCCTATTGTCTACTTCAATGCACAATCTAAGCTTGTAGATGTCTTGATTTGTAATTGAACACAAATTCTCTGAGTTTGTTCTGTAACAATTATCAGTGGGAATGCAAGAAAGTCTTTCTGTCTCCGGATCAATTGATCGAATATCAGGTGTATGGATTGAAAAACTACCCCCACACAGTCAGGACTCAGGAAACCCCATAGGCCCCTATTTAAACCCAATGTATAAAAATATGCCATTGAGATTGGACCTTTGTCCAATCGCGGAGAGTGATCTCGTAATGAAATGCAGTAGAGCTGTTCAATGCTTCGACTAACGGGGCTAAGAATCTTCAACAATTACTTGTAACATTCAAGTTCTTTGTATTCTGCAATTACTGTATATTATACTTCATCCGTTTCTATATAGTTGCAAGTTGCAACACACTTTTTCACACACTTTAAGAAAAAAGAATCAAGCTACTTTGTTATGAAGGCATAAATGGAAAGTTCCATTATTTTATTTGGTGGATGAGAAGCTAGGAGTTTATAAAAAGAATAAAGTGAGGGCAGAAATGTCATTGCATACAAAATAGTTTCCATATACGGTGTGTTGCAAGTATTATGATGTTTCTGTTTTAGGGAAGTGTTAAGTAAAAAGAAACAGATTGAGTATTACTGATGCATGTGGTATACCCACAAACCCTTTCAAGTTGATATTTATATAATTTAGCTGTTTAGCTTTACCTTTTAACTGCATGTTTGGTATAAATGTAAGAAAGGAAATGTATTCGGCAACAAATAAGTAAGGGAAATGATAATGTTAAGTGTTACCATTATTCTTTGTTTGGTATGACGAGGGGAAGGAATCATTTATATCATTAGGGATTGAGGAGGGAAACAAACTTGTTACCATAGGCTTGAGAAAGGTAACAAATGAGGGGTAATGGTTAACCTTAGGAGATGGATTGGGTTACCTAACCCTCAGTCCCTCACACCAAACAATAGGAAATGTAAATAATTAATTGATTCAATTTCCACCACTCCCTCTCTACTAGCTTGTCCTCATTTTTCAAACGGTAAGTAGTGTACTAAACATATTATGCAGAAATTAGAACATTGTACTCACAGTTAGAAAATTAGTTATTTTCGTGAAACAATTCAGTAGATTTTGATTGGGTTTCCTGGAGTCTCACAAAGGAAGGAAGGGTATGATACGAAGGTTATTTTGGTAAAACCACAACACATCCTTAATCAAGAGGGAATGAAACAACGTGATTAAGTGAGTATTATTTTTTGATGGAGGGAGCATTTAGATCCAAAGAAGAAAATTAGGATTGTAGAATGTCAGCAGAAAATGATTAGCTTCAATATTCAATTTTTTAGTTGGAGTATCTGATTCTTTTTGGGTATTTTGTTTATCTTTTTCCTGCAGGACAAACATTTATGTGAATCCACGTGTAGCTCCACCACTTGTTGGTGGCTACGGATATGGCCCCGGGGTCCCATACTACGGTGGATGGGGTTGGTCGCCGTTTTCATTCTTTGCTCCAGGCCCAAGTGTTGCAGTTGGTGTAGGTGGTGGATTCGACCTCCTTGTCTTGTTCATGGTTATGGGAGCGGTTTCAGCTGTTGTTAGGCGGTTCCTACAGCCAAGGAAGGAGGATGATGATTATTAGAGGAATCACATCAAACATTTTGTACTAATCTATAAGATAGCCAACTCAACAAGTCCATCAAGTTGATGTATAAATTGTATATGAATGATGTTTTGCTACTCAGATTACATTGGTAGGTGTAATTATTCCTGAAATCAGAGTATTGTCCTGATAATATGAATTACCTAAGTTGAATTTCTTTTACAGTGCTTCTGTCTTCCCTTTCTTTGAGATGAACTCTTGGATGAGGTTATTGGCATACGATGTTTACTCATTAGGGTATCCCTCATACTCTTCCCCAACCTCCAGACCTTGCCACATCAGTTTTCCCCTAATTTTTACCCTTTTTTTTTTCTATGGAACCCCT

mRNA sequence

AAAAGGACAAAATTCTTGGAAAAATCTATCATCCATAATCCATCTGCCACGTAGGAATATTGTTTATCATGGAAAATTGAGAATTCCAAATAGAAATGAGCACCAAAAATAAGTAGAAAATATTGAACCTGTTAACATTCTTTGTTTCACTGAAATTTGAAGTAGAAATTTGTTCTCATTTGAAATATGATAATGGGATCTTTACAGAAGAGCTTCTTCTCAAACCCACTACTAATCCAAACCCAGAATCACATTCACAGAAGAACCCCGAATTCTTTTTTCATTGTTTCCTGCAAACTCCCACCAAATGATCACCAAAATCAACCTGATACTTCTAGGAAAATAGAGAAGCAGCTGGCAAAGTTAGCAATAGTGACATTGGCAGCAGGAGTATTGACTCTAGGATCAGTTGGTGATGCTTCAGCTGCCAAATCTGGTGGTCGTATTGGTGGTCAGGCTTTTCGCTCTTCTGCTCCTCGTCCCTCGTCTCCTAGAGTTAATTCTAGGACAAACATTTATGTGAATCCACGTGTAGCTCCACCACTTGTTGGTGGCTACGGATATGGCCCCGGGGTCCCATACTACGGTGGATGGGGTTGGTCGCCGTTTTCATTCTTTGCTCCAGGCCCAAGTGTTGCAGTTGGTGTAGGTGGTGGATTCGACCTCCTTGTCTTGTTCATGGTTATGGGAGCGGTTTCAGCTGTTGTTAGGCGGTTCCTACAGCCAAGGAAGGAGGATGATGATTATTAGAGGAATCACATCAAACATTTTGTACTAATCTATAAGATAGCCAACTCAACAAGTCCATCAAGTTGATGTATAAATTGTATATGAATGATGTTTTGCTACTCAGATTACATTGGTAGGTGTAATTATTCCTGAAATCAGAGTATTGTCCTGATAATATGAATTACCTAAGTTGAATTTCTTTTACAGTGCTTCTGTCTTCCCTTTCTTTGAGATGAACTCTTGGATGAGGTTATTGGCATACGATGTTTACTCATTAGGGTATCCCTCATACTCTTCCCCAACCTCCAGACCTTGCCACATCAGTTTTCCCCTAATTTTTACCCTTTTTTTTTTCTATGGAACCCCT

Coding sequence (CDS)

ATGATAATGGGATCTTTACAGAAGAGCTTCTTCTCAAACCCACTACTAATCCAAACCCAGAATCACATTCACAGAAGAACCCCGAATTCTTTTTTCATTGTTTCCTGCAAACTCCCACCAAATGATCACCAAAATCAACCTGATACTTCTAGGAAAATAGAGAAGCAGCTGGCAAAGTTAGCAATAGTGACATTGGCAGCAGGAGTATTGACTCTAGGATCAGTTGGTGATGCTTCAGCTGCCAAATCTGGTGGTCGTATTGGTGGTCAGGCTTTTCGCTCTTCTGCTCCTCGTCCCTCGTCTCCTAGAGTTAATTCTAGGACAAACATTTATGTGAATCCACGTGTAGCTCCACCACTTGTTGGTGGCTACGGATATGGCCCCGGGGTCCCATACTACGGTGGATGGGGTTGGTCGCCGTTTTCATTCTTTGCTCCAGGCCCAAGTGTTGCAGTTGGTGTAGGTGGTGGATTCGACCTCCTTGTCTTGTTCATGGTTATGGGAGCGGTTTCAGCTGTTGTTAGGCGGTTCCTACAGCCAAGGAAGGAGGATGATGATTATTAG

Protein sequence

MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKLAIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQPRKEDDDY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24325	Spo24325	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24325.1	Spo24325.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24325.1.utr5p.1	Spo24325.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24325.1.CDS.3	Spo24325.1.CDS.3	CDS
Spo24325.1.CDS.2	Spo24325.1.CDS.2	CDS
Spo24325.1.CDS.1	Spo24325.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24325.1.utr3p.1	Spo24325.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24325.1.exon.3	Spo24325.1.exon.3	exon
Spo24325.1.exon.2	Spo24325.1.exon.2	exon
Spo24325.1.exon.1	Spo24325.1.exon.1	exon

Homology

[Close]

BLAST of Spo24325.1 vs. NCBI nr
Match: gi|902238969|gb|KNA25390.1| (hypothetical protein SOVF_006970 [Spinacia oleracea])

HSP 1 Score: 372.1 bits (954), Expect = 5.800e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60
           MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL
Sbjct: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60

Query: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120
           AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL
Sbjct: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120

Query: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180
           VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP
Sbjct: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180

Query: 181 RKEDDDY 188
           RKEDDDY
Sbjct: 181 RKEDDDY 187

[Close]

BLAST of Spo24325.1 vs. NCBI nr
Match: gi|731354201|ref|XP_010688456.1| (PREDICTED: uncharacterized protein LOC104902390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 290.8 bits (743), Expect = 1.700e-75
Identity = 149/186 (80.11%), Postives = 162/186 (87.10%), Query Frame = 1


		  
Query: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60
           MI+GSL KSF +NPL+ QTQ    R T N FFIVSCK P NDHQNQ D+SRK+E QLAKL
Sbjct: 1   MIIGSLHKSFLTNPLIFQTQKPKPRIT-NHFFIVSCKYPSNDHQNQNDSSRKVENQLAKL 60

Query: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120
           AIVTLAAGVLTLGSVGDASAAKSGGR+GGQAFRSSAPR SSPRVNSRTNIYVNPRVAPPL
Sbjct: 61  AIVTLAAGVLTLGSVGDASAAKSGGRVGGQAFRSSAPRASSPRVNSRTNIYVNPRVAPPL 120

Query: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180
           VGGYGYG G P+YGGWGWSPFSFF+PGPS A+G+GGGFDL+V FMV GAVSAVVRR    
Sbjct: 121 VGGYGYGLGSPFYGGWGWSPFSFFSPGPSAALGIGGGFDLIVFFMVFGAVSAVVRRLFGS 180

Query: 181 RKEDDD 187
           R+E+DD
Sbjct: 181 RREEDD 185

[Close]

BLAST of Spo24325.1 vs. NCBI nr
Match: gi|1009170151|ref|XP_015866048.1| (PREDICTED: uncharacterized protein LOC107403653 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.600e-60
Identity = 127/189 (67.20%), Postives = 149/189 (78.84%), Query Frame = 1


		  
Query: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60
           M + S Q+SF +N L   T      +   S F +SC+ PPN      ++SRK E QLAKL
Sbjct: 1   MSIASSQQSFLANALYSPTHK-FKTKISTSTFTISCRFPPNHDPKDSNSSRKNENQLAKL 60

Query: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVN--SRTNIYVNPRVAP 120
           A+VTLAAGVLTLGSV DASAAKSGGR+GGQAFRSSAPR S+PR N  SRTNIY+NP VAP
Sbjct: 61  AMVTLAAGVLTLGSVHDASAAKSGGRVGGQAFRSSAPR-SAPRANNNSRTNIYINPPVAP 120

Query: 121 PLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFL 180
           PLVGGYGYG GVP+YGGWGWSPFSFF PGPSVAVG+GGGF+  +LF+ +GA++AVVRRF+
Sbjct: 121 PLVGGYGYGFGVPFYGGWGWSPFSFFTPGPSVAVGIGGGFETFLLFVFLGALAAVVRRFV 180

Query: 181 QPRKEDDDY 188
            PR+EDDDY
Sbjct: 181 GPREEDDDY 187

[Close]

BLAST of Spo24325.1 vs. NCBI nr
Match: gi|351724585|ref|NP_001235783.1| (uncharacterized protein LOC100500282 [Glycine max])

HSP 1 Score: 235.7 bits (600), Expect = 6.400e-59
Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1


		  
Query: 3   MGSLQKSFFSNPLLIQTQNHIHRRT---PNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAK 62
           + S  +SF +N L+  T N   R T   P+S   VSC  P ++ Q  P   +K E +LAK
Sbjct: 4   IASSHQSFLTNALIPLTHNPKFRTTVTFPSSLKTVSCSSPQHEQQQSP--RKKNENKLAK 63

Query: 63  LAIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRV-NSRTNIYVNPRVAP 122
           LAIV LAAGVLTLGSV DASAAK+GGRIGGQAF+S+APR SSPR+ NSRTNIY+NPRVAP
Sbjct: 64  LAIVALAAGVLTLGSVHDASAAKTGGRIGGQAFKSAAPR-SSPRINNSRTNIYINPRVAP 123

Query: 123 PLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFL 182
           PLVGGYGYG GVP+YGGWGWSPFSFFAPGPSVAVGVGGGFD ++LFM +GA +AVVRRF 
Sbjct: 124 PLVGGYGYGYGVPFYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGAAAAVVRRFF 183

Query: 183 QPRKEDDDY 188
             R EDDDY
Sbjct: 184 GSRNEDDDY 189

[Close]

BLAST of Spo24325.1 vs. NCBI nr
Match: gi|728849092|gb|KHG28535.1| (hypothetical protein F383_00330 [Gossypium arboreum])

HSP 1 Score: 230.7 bits (587), Expect = 2.100e-57
Identity = 121/163 (74.23%), Postives = 138/163 (84.66%), Query Frame = 1


		  
Query: 26  RTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKLAIVTLAAGVLTLGSVGDASAAKSGG 85
           + PNS   ++C+   +DH    DTS + EKQLAKLA+VTLAAGVLTLGSVGDASAAKSGG
Sbjct: 26  KLPNSPTFITCRFHSDDHD---DTSWRNEKQLAKLAMVTLAAGVLTLGSVGDASAAKSGG 85

Query: 86  RIGGQAFRSSAPRPSSPRVN--SRTNIYVNPRVAPPLVGGYGYGPGVPYYGGWGWSPFSF 145
           R+GGQAFRS+APR S+PR N  SRTNIY+NPRVAPPLVGGYGYG GVP+YGGWGWSPFSF
Sbjct: 86  RVGGQAFRSAAPR-SAPRANNNSRTNIYINPRVAPPLVGGYGYGYGVPFYGGWGWSPFSF 145

Query: 146 FAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQPRKEDDD 187
           FAPGPSVAVG+GGGFD L+LFM +GA +AVVRRF   R ED+D
Sbjct: 146 FAPGPSVAVGIGGGFDTLLLFMFLGAFAAVVRRFFGSRNEDED 184

[Close]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0W0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006970 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.000e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60
           MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL
Sbjct: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60

Query: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120
           AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL
Sbjct: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120

Query: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180
           VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP
Sbjct: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180

Query: 181 RKEDDDY 188
           RKEDDDY
Sbjct: 181 RKEDDDY 187

[Close]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPV7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198380 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.200e-75
Identity = 149/186 (80.11%), Postives = 162/186 (87.10%), Query Frame = 1


		  
Query: 1   MIMGSLQKSFFSNPLLIQTQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKL 60
           MI+GSL KSF +NPL+ QTQ    R T N FFIVSCK P NDHQNQ D+SRK+E QLAKL
Sbjct: 1   MIIGSLHKSFLTNPLIFQTQKPKPRIT-NHFFIVSCKYPSNDHQNQNDSSRKVENQLAKL 60

Query: 61  AIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVNSRTNIYVNPRVAPPL 120
           AIVTLAAGVLTLGSVGDASAAKSGGR+GGQAFRSSAPR SSPRVNSRTNIYVNPRVAPPL
Sbjct: 61  AIVTLAAGVLTLGSVGDASAAKSGGRVGGQAFRSSAPRASSPRVNSRTNIYVNPRVAPPL 120

Query: 121 VGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQP 180
           VGGYGYG G P+YGGWGWSPFSFF+PGPS A+G+GGGFDL+V FMV GAVSAVVRR    
Sbjct: 121 VGGYGYGLGSPFYGGWGWSPFSFFSPGPSAALGIGGGFDLIVFFMVFGAVSAVVRRLFGS 180

Query: 181 RKEDDD 187
           R+E+DD
Sbjct: 181 RREEDD 185

[Close]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Match: C6T189_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G098100 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.500e-59
Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1


		  
Query: 3   MGSLQKSFFSNPLLIQTQNHIHRRT---PNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAK 62
           + S  +SF +N L+  T N   R T   P+S   VSC  P ++ Q  P   +K E +LAK
Sbjct: 4   IASSHQSFLTNALIPLTHNPKFRTTVTFPSSLKTVSCSSPQHEQQQSP--RKKNENKLAK 63

Query: 63  LAIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRV-NSRTNIYVNPRVAP 122
           LAIV LAAGVLTLGSV DASAAK+GGRIGGQAF+S+APR SSPR+ NSRTNIY+NPRVAP
Sbjct: 64  LAIVALAAGVLTLGSVHDASAAKTGGRIGGQAFKSAAPR-SSPRINNSRTNIYINPRVAP 123

Query: 123 PLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFL 182
           PLVGGYGYG GVP+YGGWGWSPFSFFAPGPSVAVGVGGGFD ++LFM +GA +AVVRRF 
Sbjct: 124 PLVGGYGYGYGVPFYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGAAAAVVRRFF 183

Query: 183 QPRKEDDDY 188
             R EDDDY
Sbjct: 184 GSRNEDDDY 189

[Close]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QRD4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_027572 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.500e-59
Identity = 129/189 (68.25%), Postives = 148/189 (78.31%), Query Frame = 1


		  
Query: 3   MGSLQKSFFSNPLLIQTQNHIHRRT---PNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAK 62
           + S  +SF +N L+  T N   R T   P+S   VSC  P ++ Q  P   +K E +LAK
Sbjct: 4   IASSHQSFLTNALIPLTHNPKFRTTVTFPSSLKTVSCSSPQHEQQQSP--RKKNENKLAK 63

Query: 63  LAIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRV-NSRTNIYVNPRVAP 122
           LAIV LAAGVLTLGSV DASAAK+GGRIGGQAF+S+APR SSPR+ NSRTNIY+NPRVAP
Sbjct: 64  LAIVALAAGVLTLGSVHDASAAKTGGRIGGQAFKSAAPR-SSPRINNSRTNIYINPRVAP 123

Query: 123 PLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFL 182
           PLVGGYGYG GVP+YGGWGWSPFSFFAPGPSVAVGVGGGFD ++LFM +GA +AVVRRF 
Sbjct: 124 PLVGGYGYGYGVPFYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGAAAAVVRRFF 183

Query: 183 QPRKEDDDY 188
             R EDDDY
Sbjct: 184 GSRNEDDDY 189

[Close]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PU34_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_00330 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.400e-57
Identity = 121/163 (74.23%), Postives = 138/163 (84.66%), Query Frame = 1


		  
Query: 26  RTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLAKLAIVTLAAGVLTLGSVGDASAAKSGG 85
           + PNS   ++C+   +DH    DTS + EKQLAKLA+VTLAAGVLTLGSVGDASAAKSGG
Sbjct: 26  KLPNSPTFITCRFHSDDHD---DTSWRNEKQLAKLAMVTLAAGVLTLGSVGDASAAKSGG 85

Query: 86  RIGGQAFRSSAPRPSSPRVN--SRTNIYVNPRVAPPLVGGYGYGPGVPYYGGWGWSPFSF 145
           R+GGQAFRS+APR S+PR N  SRTNIY+NPRVAPPLVGGYGYG GVP+YGGWGWSPFSF
Sbjct: 86  RVGGQAFRSAAPR-SAPRANNNSRTNIYINPRVAPPLVGGYGYGYGVPFYGGWGWSPFSF 145

Query: 146 FAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRRFLQPRKEDDD 187
           FAPGPSVAVG+GGGFD L+LFM +GA +AVVRRF   R ED+D
Sbjct: 146 FAPGPSVAVGIGGGFDTLLLFMFLGAFAAVVRRFFGSRNEDED 184

[Close]

BLAST of Spo24325.1 vs. TAIR (Arabidopsis)
Match: AT5G57345.1 (unknown protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.000e-54
Identity = 120/190 (63.16%), Postives = 142/190 (74.74%), Query Frame = 1


		  
Query: 3   MGSLQKSFFSNPLLIQ----TQNHIHRRTPNSFFIVSCKLPPNDHQNQPDTSRKIEKQLA 62
           + S ++SF SN    Q     +++++   PNS   + CK   + H ++ D+SRK E QLA
Sbjct: 6   IASSRQSFLSNNFSFQHSFKPKSNVNLTRPNS---ICCK--SSHHDDETDSSRKNENQLA 65

Query: 63  KLAIVTLAAGVLTLGSVGDASAAKSGGRIGGQAFRSSAPRPSSPRVN--SRTNIYVNPRV 122
           KLAI TLA GVL LGSVGDA AAKSGGRIGGQAFRSSAPRP  PR+N  SRTNIYVNP+V
Sbjct: 66  KLAIATLAVGVLALGSVGDAFAAKSGGRIGGQAFRSSAPRPP-PRINNRSRTNIYVNPQV 125

Query: 123 APPLVGGYGYGPGVPYYGGWGWSPFSFFAPGPSVAVGVGGGFDLLVLFMVMGAVSAVVRR 182
           APPL+GGYGYG     YGG+GWSPFSFFAPGP+VAVGVGGGFDLL+LFM  GA SAV R 
Sbjct: 126 APPLIGGYGYG-----YGGYGWSPFSFFAPGPAVAVGVGGGFDLLLLFMFFGAASAVARN 184

Query: 183 FLQPRKEDDD 187
           F + R ++DD
Sbjct: 186 FFRSRNDEDD 184

The following BLAST results are available for this feature:

BLAST of Spo24325.1 vs. NCBI nr
BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
BLAST of Spo24325.1 vs. ExPASy Swiss-Prot
BLAST of Spo24325.1 vs. TAIR (Arabidopsis)

BLAST of Spo24325.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238969\|gb\|KNA25390.1\|	5.8e-100	100.	hypothetical protein SOVF_0069...	[more]
gi\|731354201\|ref\|XP_010688456.1\|	1.7e-75	80.1	PREDICTED: uncharacterized pro...	[more]
gi\|1009170151\|ref\|XP_015866048.1\|	2.6e-60	67.2	PREDICTED: uncharacterized pro...	[more]
gi\|351724585\|ref\|NP_001235783.1\|	6.4e-59	68.2	uncharacterized protein LOC100...	[more]
gi\|728849092\|gb\|KHG28535.1\|	2.1e-57	74.2	hypothetical protein F383_0033...	[more]

BLAST of Spo24325.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0W0_SPIOL	4.0e-100	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BPV7_BETVU	1.2e-75	80.1	Uncharacterized protein OS=Bet...	[more]
C6T189_SOYBN	4.5e-59	68.2	Uncharacterized protein OS=Gly...	[more]
A0A0B2QRD4_GLYSO	4.5e-59	68.2	Uncharacterized protein OS=Gly...	[more]
A0A0B0PU34_GOSAR	1.4e-57	74.2	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo24325.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24325.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G57345.1	1.0e-54	63.1	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010903	Protein of unknown function DUF1517	PFAM	PF07466	DUF1517	coord: 80..179 score: 3.
None	No IPR available	PANTHER	PTHR37768	FAMILY NOT NAMED	coord: 1..187 score: 1.4E
None	No IPR available	PANTHER	PTHR37768:SF1	SUBFAMILY NOT NAMED	coord: 1..187 score: 1.4E