Spo23318.1 (mRNA)

Overview
NameSpo23318.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUbiquitin family protein
Locationchr6 : 43462638 .. 43467954 (-)
Sequence length1388
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCTTCGTATTCAGCAACGACGATTAACAAAGTCCAAGCCGAAATTTCAGCGCTTTTCCTAAGCAATTCCATCTTCAACGAAAGCACAACCATTTCTTTCTGGGTTTTTTTTTGTGATTATCTGAACTAAATTCTTCATCAAATTGAGAAAATCAAATCAATAAAAGATGAGTGAGATTCAAATTGAAGAAAGCAGCAGCGATCCCACACTGGTTGAAATCCTTCTCAAAACAATCGGCCCTTCTCGCCCTTCTCGCCTTAAACTCCCTCCTCAAATTAAGGTAATCTAACTTACTTCTTTAATTATTTCTTAATCTTTTGTAATTTTTACATTTTTTGCATGATTTTGTTGAGAATTTGGGGGATAATTTTGGCATTTGCTTGTTTTTTTGAATTTACTCATTTGTTTGATAGAATTTGTTATTAATTATAAACCCTAGGTGCGTGATTTGAGAAAATTAGTTGCTGCAAATAAAAATTTACCAATTGAGAGTTTGAAGCTAATATCGCGAGGGAGTGCATTGCATGATAGCGAAAATGGAGAAGATGTTCGTGTTCAGCTTGCAGATGGTGGTATGATCTTATTCTGCAATTATTTTTAAGTTTTTTTCATGTAAATTTCGTCATTTTCAAATTGAATTATGTTACACTGGATATAATTGTTGATTTATTCCTAATTTGATAAAAATTTAAGTCAAAAAAGTATGGACTCCCATTTAATTTAGTGCATCATCGCCGCCACCATTCGTATATAAAGTTTTGGGGTGATCTCGTAAATTACTTTGAGTATGATGGACGGATGGCTGCAAATTTTATTTGTTTAGGAACTGGTTTATCAAAATCCTAGGCTTGTTACATATGTGATGATTAATTGAACATTAATGATTACTTAGAGAGATTCTGGGAAGTTTGAATAATGTTGTAGTGTAAACTTAACTAATTGGGGAAAATGAAGAGGATATATGGTTATTAAAATATCCAAGAGCTATTGGCCAAGCAGGATGTGTACAATTTTTGGAGGAATCTTTAGGTCTGGAAGAGCTTTGGAAGAGTGATCGAGATTATGATGCCCTTAAAGTTATTTGCTTAAACTCTTCATGGATCCAGCACATCAGGTTATACCTTTATTTAGGATCTTATATTAAGAAAGTGTGGGGAAGAGAAAATGAGGGGTTCATCTTCCCTTGTTTGCATAATATATTCCATGGAAAACATTTTTCAAGGAAAAACACAATTCCAAACTAGTTTTCCTTTGTTTGGTTCCTTCAAGGAAAAATGGTAGAAGATGGTGAAGATTGAGGGGAAGAAGGGAAAGGGAGGTAAGGAGGAAAGATGGAAAAGTGGTTTCCTCCCTTTCAAATGGAAAAGGTTTTTCCACCTTTTGGGGAGTCATGGAAAATTGTTTTTCATTCCTTGTCAAACCAAACAACGTAAAATGATTGAAAGGGGGAAAATCGTTTTCCATGAAAACGTTTTACACCCTACCAAACGGAGCCTTAGGGATACATTTTCCTCTATTGGACTCTCAACATATTATATATTTCGCTTATGGTAGATACTTGAAAAGACATGGAAGTAAGTAGCTTACTCCTTTATATTATAATGTTGATTTTCTCCTGTGAAGTGATCACTGTAGTTTCTTACAAAGGCTCTTTCAAGGACCGTCCTAAACTCCTAACTCTTAAGACATAGATAATTTCTTGTTTATAGGTTCTGTTTTGAGAACTCTGTGATATGCAGATCCTTGTTAATGTTGGCTAGCTTTTACAAGATAGGCATTCGATTATTGGGAGTGAAAAAGTACCCTAGCCTCTACAAGATAATCAGATAAAGATGAATATCATGCCCGTGCATGACACACCACTGTATACTTCACCACCCTCTACCCCACCCCTCGGAAAAAAAATTAAATAGTTAATTCAAAGTCTGGTCAAGATTTGTTACTTTTAACATTCTAGAAGGTGCTGCTTGTAACGAACGGTGTAGTTATAGAGATTTTAACATTTTTGTCTTTAAGGTGATGTCATAGACTATGTTTGCCTTTTGCCTGTTTATGCACCATCAATATTGATATGAACTTATGAAGTGCTATGCATCATGTTTCAGATTGCTTGATTGTAGCAGTCAGACCGAAGGCACCACCGAAGCATCTTAGAGCTGGATATGATGAGGATGAGGATGACGATGAAGATGATTTGGTCTGATTACGATAAGTTTTTCAACTTGACTCCTTCAATTTAGTAAGATGGCTTCTCACTTTGCATCCCCATGCCTTTTCTTCTTGTTCGTTAATGGAATGCAGAAGTTCCAGCTCCCAGAATCAACAAGTCGATTGAAGTGGAAGCTATATCGTATTTTACATGATAAGCTGAAACTTCCTGGTGAGTAATTTAGTTGAATACTATATTAAGATTTTTAACTTACGCTAAATATGTGCTGATTTTCACTTAATTCTTTATTTGTAGATATCATTTTGATCGCAATTTTCTCTCTCAGCTTAAAGGCGTGGGCCTTGATAATCCTATGGTTTATCTTGGCTCCTGTTGCACATCGATGGGATCTGGGACCATTATATGTAAGTTAAATAGGTCACCATTCTACGAGCCTATGTCCCTGCTATGTGTGTGTAGTCTTGTTACATGTACTGTGGGCATGTGGCGTTGCATGGGGTACATGTATGGTTTGAGATTGGTCGCGGTTTTTCTGTTGCTTGGTTGCTGCGATCAATAGTGTTGTCAGAATGAGTTTGGTTGGCATACGTTAAAATTCTTTTTACTGGGTTCGTTTAAATAAAATATTTCTAGGCCTAACTGTCATTGGACTCTCAACCTTTGCTAGATTGAGATCAAACAGATGACAAATGCAACCTGACTTTTGTTGTTTCAAACACCAAAGATTGATAGTTCAAACACGATAATATTCAGTCTCTCTTATGCTTGCTATTATTTAGATTATTATAAGGGAAATAATAAGATCAACTTCATCTGTTGGCTCATGGAAGAATTCCCATTTGTTAAATATTCAAGACTTCACATCATGCAATAACAAAAAATAGTGCTTGTCCTTTTTCAGCTATTTTACAACTGATTATGGTTCATGATAGCAATTACTTGGATGCATCTATTTTAGGTTCTAAGCTTTACTTTTGTTAATCATGTTATTTGATCTTATTGATCCCGAAGCAAATGACAGAAAATATGTAGTTTGTAGATTAGATAGATTATTTATTTTGATAGTGCCAACAAAAGTCAAATCCCCATCAGCTTGAGAAATGACTGTAAGATCAAAGGAAGAGAGCTAGAACTTCCTGTTTTAAGATTCTTTCTTCTAATGTAGGACACTAGGACTCGAATTCTTTTGCCAGGTCAGGAGTTGCAGGTATATCTGAAGACTAAACGAACAAAAAAAATGACCGAGTAGGTGTAGACGTGTAGTCTAATGGAAGAATTCGAACATATAACTGAACGGACAAAAAAATGACAAAAAGTAGGTGTAGTCTAGCGGAAGAATTCGAACATATAAGGAGGGATGACTTAATCATTCAGATTTGGGGGATTATTCATAGATGAGAATTGATATGCAGCTATAATATTCAATCGGCCTGCTGGTTGGCTAGTTTAGAATTGGATGGACCTATTATCTATCAAGATAGGGTAAGTGGTCTGGAGTGCTAAGTCTAATTAATTGGAATTTCTGTTTTATGATTATTTTTGCTTCTATTTGTGGTTTTTTTACTGTTTTCCTTTCCTTTTCCTGCTAGTAATCCTTTCTAGTAGTGATATCGAAGCAATTAAAAATTCCTTTGTCCACATCACATTGGTTTGATACTATCCTTAACTAGTGAACTTTCCCCATTTGTTCAGATACTTGGAACAGGATTTTTTATCATCTTTTGGAATCTTGGAAATCGTCAATCAGGTGAACTCAGGTAAGACCTGACAAAGGCGTTGTTGATGTCTTTATTTTGTTATCTCCTAGTATTGCCAGTCTTTCCAAATTCAAAAACCATGCAATTTACGTTATCCCTTTTTCCCAACTTACCACGATTAATATGCATTAACTTCAGTTCCCTGCTTAGTTAAGGACTTGGTGTATACAGGAATGATAAAAGTGTATCCCAGGGATTTTAATCCCCCTTACATGTTTGGCCTCTAGTTTTCCCTTCTATGATTTTCATCTCTATTGTCCATCAATGAACTTGAACCAGACGTAGCTTGAATTTGTGGGACTTCAATGCAATTAGCCAATTAGGCCAGAAGTGTTTCTTTCAAGATTATTATGCTGTCAGCTTGTGTCAGAGAATTCCTCCCACATGTCGGGAATACACTCTGCCAAGTTTTTTTTTTTTTTTTGATAAGGAAAGAAAACCCAAGCGGACTACCTGAAATCATCCTTTCGGATGAATTACAATGACTCCGAGAAAATTAGAAAAGGGATAAAGAGAACAATTAAACCTACGCTGAAACCTCATACTATCCCAGCCCCAATTCCAAGAAAACTTGGTGAATAGACTTTAAAGATAGACGATTAGCCGAACGGTATATAATAACGCCCCATCCTCCGAAAGAAACCAAAACCCGAAGCCTGACTCTAACCAACTACAACAACAACAACAACTAGCTAACATTGCCAAGTTGGTTATTGTACATGATTGTCACTCTAATGCTGATTGTTAATGTTGATATGCAGTGCATATTCAATCTTCAATGAGGACTTCAGAGAACTTCCGGGAACTCTTAACGCAGAACGCTTGGACAGAGACCTACGAACAGGTCAGCTTTAATGTGATGGTACAAACGCATTATAATGTATCTGCAGGATACCTGAAGAAAATATGTAAGCACAATTTTTGTGATAGATTAGGTTCTCATGATCTGTAAGCACAAACTCCTCTTGAATACGCCGTGTGTATATGCTGAAATTATGACTGAAGTTGTCAATACAGTTTTGGTCATGGAAAAGTTACTGTAAAGTTTCTCACCATAATTGTTCTGGTACTCCTTATTGTTACTGTCTCCTCTCTCCATTCCTTATGATGTGTACTAAGAATTTGCTTGAAGATATATGTGTGTTTAAACCTGACTAATAGGAAGTAATAATCTGTGTTGTAAATTGTAAAATGGCGAGTAATATTACATTGATATTGTAGGGTGAGTTCATAATACGGCATAAATGAAGTATGAGGGTAGATATTACTCCGTATGATTTATGCTTTTGTTCATTTTACCTATACCGGCAATGGTAACTATTGTAGTAACTATTATGATCTCATTTGTTCCCCAGAAAATTGTCTGGAATTCTTTAAAAAAAAGTGGC

mRNA sequence

GTGCTTCGTATTCAGCAACGACGATTAACAAAGTCCAAGCCGAAATTTCAGCGCTTTTCCTAAGCAATTCCATCTTCAACGAAAGCACAACCATTTCTTTCTGGGTTTTTTTTTGTGATTATCTGAACTAAATTCTTCATCAAATTGAGAAAATCAAATCAATAAAAGATGAGTGAGATTCAAATTGAAGAAAGCAGCAGCGATCCCACACTGGTTGAAATCCTTCTCAAAACAATCGGCCCTTCTCGCCCTTCTCGCCTTAAACTCCCTCCTCAAATTAAGGTGCGTGATTTGAGAAAATTAGTTGCTGCAAATAAAAATTTACCAATTGAGAGTTTGAAGCTAATATCGCGAGGGAGTGCATTGCATGATAGCGAAAATGGAGAAGATGTTCGTGTTCAGCTTGCAGATGGTGATTGCTTGATTGTAGCAGTCAGACCGAAGGCACCACCGAAGCATCTTAGAGCTGGATATGATGAGGATGAGGATGACGATGAAGATGATTTGAAGTTCCAGCTCCCAGAATCAACAAGTCGATTGAAGTGGAAGCTATATCGTATTTTACATGATAAGCTGAAACTTCCTGATATCATTTTGATCGCAATTTTCTCTCTCAGCTTAAAGGCGTGGGCCTTGATAATCCTATGGTTTATCTTGGCTCCTGTTGCACATCGATGGGATCTGGGACCATTATATATACTTGGAACAGGATTTTTTATCATCTTTTGGAATCTTGGAAATCGTCAATCAGGTGAACTCAGTGCATATTCAATCTTCAATGAGGACTTCAGAGAACTTCCGGGAACTCTTAACGCAGAACGCTTGGACAGAGACCTACGAACAGGTCAGCTTTAATGTGATGGTACAAACGCATTATAATGTATCTGCAGGATACCTGAAGAAAATATGTAAGCACAATTTTTGTGATAGATTAGGTTCTCATGATCTGTAAGCACAAACTCCTCTTGAATACGCCGTGTGTATATGCTGAAATTATGACTGAAGTTGTCAATACAGTTTTGGTCATGGAAAAGTTACTGTAAAGTTTCTCACCATAATTGTTCTGGTACTCCTTATTGTTACTGTCTCCTCTCTCCATTCCTTATGATGTGTACTAAGAATTTGCTTGAAGATATATGTGTGTTTAAACCTGACTAATAGGAAGTAATAATCTGTGTTGTAAATTGTAAAATGGCGAGTAATATTACATTGATATTGTAGGGTGAGTTCATAATACGGCATAAATGAAGTATGAGGGTAGATATTACTCCGTATGATTTATGCTTTTGTTCATTTTACCTATACCGGCAATGGTAACTATTGTAGTAACTATTATGATCTCATTTGTTCCCCAGAAAATTGTCTGGAATTCTTTAAAAAAAAGTGGC

Coding sequence (CDS)

ATGAGTGAGATTCAAATTGAAGAAAGCAGCAGCGATCCCACACTGGTTGAAATCCTTCTCAAAACAATCGGCCCTTCTCGCCCTTCTCGCCTTAAACTCCCTCCTCAAATTAAGGTGCGTGATTTGAGAAAATTAGTTGCTGCAAATAAAAATTTACCAATTGAGAGTTTGAAGCTAATATCGCGAGGGAGTGCATTGCATGATAGCGAAAATGGAGAAGATGTTCGTGTTCAGCTTGCAGATGGTGATTGCTTGATTGTAGCAGTCAGACCGAAGGCACCACCGAAGCATCTTAGAGCTGGATATGATGAGGATGAGGATGACGATGAAGATGATTTGAAGTTCCAGCTCCCAGAATCAACAAGTCGATTGAAGTGGAAGCTATATCGTATTTTACATGATAAGCTGAAACTTCCTGATATCATTTTGATCGCAATTTTCTCTCTCAGCTTAAAGGCGTGGGCCTTGATAATCCTATGGTTTATCTTGGCTCCTGTTGCACATCGATGGGATCTGGGACCATTATATATACTTGGAACAGGATTTTTTATCATCTTTTGGAATCTTGGAAATCGTCAATCAGGTGAACTCAGTGCATATTCAATCTTCAATGAGGACTTCAGAGAACTTCCGGGAACTCTTAACGCAGAACGCTTGGACAGAGACCTACGAACAGGTCAGCTTTAA

Protein sequence

MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo23318Spo23318gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo23318.1Spo23318.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23318.1.utr5p.1Spo23318.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23318.1.CDS.7Spo23318.1.CDS.7CDS
Spo23318.1.CDS.6Spo23318.1.CDS.6CDS
Spo23318.1.CDS.5Spo23318.1.CDS.5CDS
Spo23318.1.CDS.4Spo23318.1.CDS.4CDS
Spo23318.1.CDS.3Spo23318.1.CDS.3CDS
Spo23318.1.CDS.2Spo23318.1.CDS.2CDS
Spo23318.1.CDS.1Spo23318.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23318.1.utr3p.1Spo23318.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23318.1.exon.7Spo23318.1.exon.7exon
Spo23318.1.exon.6Spo23318.1.exon.6exon
Spo23318.1.exon.5Spo23318.1.exon.5exon
Spo23318.1.exon.4Spo23318.1.exon.4exon
Spo23318.1.exon.3Spo23318.1.exon.3exon
Spo23318.1.exon.2Spo23318.1.exon.2exon
Spo23318.1.exon.1Spo23318.1.exon.1exon


Homology
[Close]
BLAST of Spo23318.1 vs. NCBI nr
Match: gi|902186681|gb|KNA10761.1| (hypothetical protein SOVF_141360 [Spinacia oleracea])

HSP 1 Score: 447.6 bits (1150), Expect = 1.300e-122
Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 1 

		  

Query: 1   MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLI 60
           MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVA NKNLPIESLKLI
Sbjct: 1   MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAVNKNLPIESLKLI 60

Query: 61  SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES 120
           SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES
Sbjct: 61  SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES 120

Query: 121 TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT 180
           TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT
Sbjct: 121 TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT 180

Query: 181 GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL
Sbjct: 181 GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 228
[Close]
BLAST of Spo23318.1 vs. NCBI nr
Match: gi|731332575|ref|XP_010677278.1| (PREDICTED: uncharacterized protein LOC104892950 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 357.8 bits (917), Expect = 1.400e-95
Identity = 183/226 (80.97%), Postives = 208/226 (92.04%), Query Frame = 1 

		  

Query: 3   EIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISR 62
           EIQ ++S+   T VEILLKT+GP+RPSRLK+P  IKV DLRKLVAANK+LPIE+L+LISR
Sbjct: 4   EIQFDDSTLINT-VEILLKTVGPARPSRLKVPSTIKVCDLRKLVAANKHLPIETLRLISR 63

Query: 63  GSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTS 122
           G+ALHD +NGEDV VQLADGD LIVAVRPKAPPKH+RA YD+D D+DEDD+KFQLPESTS
Sbjct: 64  GNALHDRKNGEDVCVQLADGDSLIVAVRPKAPPKHVRAEYDDD-DEDEDDMKFQLPESTS 123

Query: 123 RLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGF 182
           R KW+L+  LHDKLKLPDI+LIAI+SLSLKAWA IILWFILAPV++RWDLGPLYILGTGF
Sbjct: 124 RWKWRLFCFLHDKLKLPDIVLIAIYSLSLKAWAFIILWFILAPVSYRWDLGPLYILGTGF 183

Query: 183 FIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
            IIF+NLG+RQ+GELSAYSIFNEDFRELPGTLNA+RLDRDLRTGQL
Sbjct: 184 AIIFYNLGHRQTGELSAYSIFNEDFRELPGTLNADRLDRDLRTGQL 227
[Close]
BLAST of Spo23318.1 vs. NCBI nr
Match: gi|764590674|ref|XP_011465170.1| (PREDICTED: uncharacterized protein LOC101314569 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 308.5 bits (789), Expect = 9.500e-81
Identity = 152/213 (71.36%), Postives = 183/213 (85.92%), Query Frame = 1 

		  

Query: 16  VEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGSALHDSENGEDV 75
           V+IL++TIGPSRPSRL++   I V DLRKL+A N  LP+E LKLI RG+ LHDS++G+DV
Sbjct: 23  VDILVRTIGPSRPSRLQVSSSITVLDLRKLIAENYQLPLEKLKLIMRGNVLHDSKSGQDV 82

Query: 76  RVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRLKWKLYRILHDK 135
            + L DGD LIVAV+PK P KHLR G+D+  DDDEDDLKFQLP+S+SR K ++Y +LHDK
Sbjct: 83  NLHLKDGDSLIVAVKPKPPAKHLRDGFDD--DDDEDDLKFQLPQSSSRWKRRVYAVLHDK 142

Query: 136 LKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFIIFWNLGNRQSG 195
           LKLPDI+L+AIFSLSLK W +II+WFILAPVAHRWD+GPLYILGTGF II  NLG R++G
Sbjct: 143 LKLPDILLMAIFSLSLKMWVIIIMWFILAPVAHRWDVGPLYILGTGFGIILLNLGQRKAG 202

Query: 196 ELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           ++SAYSIFNEDFRELPGTLNAERLD D+RTGQ+
Sbjct: 203 DVSAYSIFNEDFRELPGTLNAERLDGDIRTGQI 233
[Close]
BLAST of Spo23318.1 vs. NCBI nr
Match: gi|802673341|ref|XP_012081589.1| (PREDICTED: uncharacterized protein LOC105641613 [Jatropha curcas])

HSP 1 Score: 307.4 bits (786), Expect = 2.100e-80
Identity = 155/224 (69.20%), Postives = 183/224 (81.70%), Query Frame = 1 

		  

Query: 5   QIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGS 64
           +I++      LVEI LKTIGPS PSRL +P +IKV DLRKL++ N +LPIE L+LI RG 
Sbjct: 20  EIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRKLISENNHLPIEKLRLILRGK 79

Query: 65  ALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRL 124
            LHDS + +D+++QL + D LIVAV+P  P KHLR G+D+D     DDLKFQLP+STSR 
Sbjct: 80  VLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDDD-----DDLKFQLPQSTSRW 139

Query: 125 KWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFI 184
           K +LY  LHDKLKLP I+L+A+FSLSLK W LIILWFILAPVAHRWDLGPLYILGTGF I
Sbjct: 140 KRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAHRWDLGPLYILGTGFSI 199

Query: 185 IFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           IF+NLG RQ+G+LSAYSIFNEDFRELPGTLNA+RLDRD+R GQL
Sbjct: 200 IFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQL 238
[Close]
BLAST of Spo23318.1 vs. NCBI nr
Match: gi|470128670|ref|XP_004300259.1| (PREDICTED: uncharacterized protein LOC101314569 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 305.8 bits (782), Expect = 6.200e-80
Identity = 151/211 (71.56%), Postives = 181/211 (85.78%), Query Frame = 1 

		  

Query: 16  VEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGSALHDSENGEDV 75
           V+IL++TIGPSRPSRL++   I V DLRKL+A N  LP+E LKLI RG+ LHDS++G+DV
Sbjct: 23  VDILVRTIGPSRPSRLQVSSSITVLDLRKLIAENYQLPLEKLKLIMRGNVLHDSKSGQDV 82

Query: 76  RVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRLKWKLYRILHDK 135
            + L DGD LIVAV+PK P KHLR G+D+  DDDEDDLKFQLP+S+SR K ++Y +LHDK
Sbjct: 83  NLHLKDGDSLIVAVKPKPPAKHLRDGFDD--DDDEDDLKFQLPQSSSRWKRRVYAVLHDK 142

Query: 136 LKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFIIFWNLGNRQSG 195
           LKLPDI+L+AIFSLSLK W +II+WFILAPVAHRWD+GPLYILGTGF II  NLG R++G
Sbjct: 143 LKLPDILLMAIFSLSLKMWVIIIMWFILAPVAHRWDVGPLYILGTGFGIILLNLGQRKAG 202

Query: 196 ELSAYSIFNEDFRELPGTLNAERLDRDLRTG 227
           ++SAYSIFNEDFRELPGTLNAERLD D+RTG
Sbjct: 203 DVSAYSIFNEDFRELPGTLNAERLDGDIRTG 231
[Close]
BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QW78_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141360 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 9.200e-123
Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 1 

		  

Query: 1   MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLI 60
           MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVA NKNLPIESLKLI
Sbjct: 1   MSEIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAVNKNLPIESLKLI 60

Query: 61  SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES 120
           SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES
Sbjct: 61  SRGSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPES 120

Query: 121 TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT 180
           TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT
Sbjct: 121 TSRLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGT 180

Query: 181 GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL
Sbjct: 181 GFFIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 228
[Close]
BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F6X3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g106370 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.500e-96
Identity = 183/226 (80.97%), Postives = 208/226 (92.04%), Query Frame = 1 

		  

Query: 3   EIQIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISR 62
           EIQ ++S+   T VEILLKT+GP+RPSRLK+P  IKV DLRKLVAANK+LPIE+L+LISR
Sbjct: 4   EIQFDDSTLINT-VEILLKTVGPARPSRLKVPSTIKVCDLRKLVAANKHLPIETLRLISR 63

Query: 63  GSALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTS 122
           G+ALHD +NGEDV VQLADGD LIVAVRPKAPPKH+RA YD+D D+DEDD+KFQLPESTS
Sbjct: 64  GNALHDRKNGEDVCVQLADGDSLIVAVRPKAPPKHVRAEYDDD-DEDEDDMKFQLPESTS 123

Query: 123 RLKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGF 182
           R KW+L+  LHDKLKLPDI+LIAI+SLSLKAWA IILWFILAPV++RWDLGPLYILGTGF
Sbjct: 124 RWKWRLFCFLHDKLKLPDIVLIAIYSLSLKAWAFIILWFILAPVSYRWDLGPLYILGTGF 183

Query: 183 FIIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
            IIF+NLG+RQ+GELSAYSIFNEDFRELPGTLNA+RLDRDLRTGQL
Sbjct: 184 AIIFYNLGHRQTGELSAYSIFNEDFRELPGTLNADRLDRDLRTGQL 227
[Close]
BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Match: A0A067K112_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19318 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.500e-80
Identity = 155/224 (69.20%), Postives = 183/224 (81.70%), Query Frame = 1 

		  

Query: 5   QIEESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGS 64
           +I++      LVEI LKTIGPS PSRL +P +IKV DLRKL++ N +LPIE L+LI RG 
Sbjct: 20  EIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRKLISENNHLPIEKLRLILRGK 79

Query: 65  ALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRL 124
            LHDS + +D+++QL + D LIVAV+P  P KHLR G+D+D     DDLKFQLP+STSR 
Sbjct: 80  VLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDDD-----DDLKFQLPQSTSRW 139

Query: 125 KWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFI 184
           K +LY  LHDKLKLP I+L+A+FSLSLK W LIILWFILAPVAHRWDLGPLYILGTGF I
Sbjct: 140 KRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAHRWDLGPLYILGTGFSI 199

Query: 185 IFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           IF+NLG RQ+G+LSAYSIFNEDFRELPGTLNA+RLDRD+R GQL
Sbjct: 200 IFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQL 238
[Close]
BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Match: F6HTA3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01110 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 9.600e-80
Identity = 156/221 (70.59%), Postives = 185/221 (83.71%), Query Frame = 1 

		  

Query: 7   EESSSDPTLVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGSAL 66
           E    +  +V+I LKTIGPS P RL++P  I V DLRKLVA+N +LPIE+L+LI RG+ L
Sbjct: 12  EGEEEEEKMVDITLKTIGPSPPFRLRVPSPITVHDLRKLVASNGHLPIENLRLILRGNVL 71

Query: 67  HDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRLKW 126
           HD+++G+DV +QL DGD LIVAV+PK PPK +R G+ EDEDDD D+LKFQLP+STSR K 
Sbjct: 72  HDTKDGDDVSLQLNDGDSLIVAVKPKPPPKQVRDGF-EDEDDD-DNLKFQLPQSTSRWKR 131

Query: 127 KLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFIIF 186
           KL+  LHDKLKLPDIIL+AIFSLSLK W LI+ WFILAPVAHRWDLGPLYILGTGF IIF
Sbjct: 132 KLFCFLHDKLKLPDIILMAIFSLSLKMWVLIVTWFILAPVAHRWDLGPLYILGTGFCIIF 191

Query: 187 WNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQ 228
            NLG R+ G++SAYSIFNEDFRELPGTLNA+RLD+D+R GQ
Sbjct: 192 VNLGQRKHGDISAYSIFNEDFRELPGTLNADRLDQDIRAGQ 230
[Close]
BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Match: B9N2Q0_POPTR (Ubiquitin family protein OS=Populus trichocarpa GN=POPTR_0003s08770g PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.100e-79
Identity = 153/213 (71.83%), Postives = 179/213 (84.04%), Query Frame = 1 

		  

Query: 15  LVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRGSALHDSENGED 74
           + EI +KTIGPS PSRL LP  IKVRDLRKLVA N++LPIE+L+LI RG+ LHDS + +D
Sbjct: 23  MAEITVKTIGPSPPSRLLLPSPIKVRDLRKLVAENRHLPIENLRLILRGNVLHDSRDEDD 82

Query: 75  VRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSRLKWKLYRILHD 134
           +R  L +GD LIVAV+PK P KHLR G+    DDD+DDLKFQLP+S SR K +LY  LHD
Sbjct: 83  IR--LNNGDSLIVAVKPKPPAKHLRDGF----DDDDDDLKFQLPQSASRWKRRLYFFLHD 142

Query: 135 KLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFFIIFWNLGNRQS 194
           KLKLPDI+L+ +FSLSLKAWA+ ILWFILAPVAHRWDLGP+YI+GTGF II  NLG RQ+
Sbjct: 143 KLKLPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQA 202

Query: 195 GELSAYSIFNEDFRELPGTLNAERLDRDLRTGQ 228
           G+LSAYSIFNEDFRELPGTLNA+RLDRD+R GQ
Sbjct: 203 GDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 229
[Close]
BLAST of Spo23318.1 vs. TAIR (Arabidopsis)
Match: AT2G35360.1 (ubiquitin family protein)

HSP 1 Score: 263.8 bits (673), Expect = 9.500e-71
Identity = 136/225 (60.44%), Postives = 167/225 (74.22%), Query Frame = 1 

		  

Query: 7   EESSSDPT---LVEILLKTIGPSRPSRLKLPPQIKVRDLRKLVAANKNLPIESLKLISRG 66
           EE SSD T    VEI  KTIGP+RPS++++   IK+RDLR  +A     P+ +L++I RG
Sbjct: 6   EELSSDSTNNGTVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMILRG 65

Query: 67  SALHDSENGEDVRVQLADGDCLIVAVRPKAPPKHLRAGYDEDEDDDEDDLKFQLPESTSR 126
            AL D E+G+D+ V L D D  IVAV P  P     AG +  +DDD+DDLKF+LP S SR
Sbjct: 66  KALQDEEDGDDLYVTLKDQDSFIVAVIPNPP-----AGVESFDDDDDDDLKFKLPPSASR 125

Query: 127 LKWKLYRILHDKLKLPDIILIAIFSLSLKAWALIILWFILAPVAHRWDLGPLYILGTGFF 186
            K KLY  L +KLKLPDIIL+ +FSLSLK W +I LWFILAP+AHRWDLGP++ILGTGF 
Sbjct: 126 WKRKLYYFLRNKLKLPDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPIFILGTGFS 185

Query: 187 IIFWNLGNRQSGELSAYSIFNEDFRELPGTLNAERLDRDLRTGQL 229
           II  NLG RQ G++SAYSIFNEDFRELPGT NA+R+DRD+R GQ+
Sbjct: 186 IILLNLGKRQPGDVSAYSIFNEDFRELPGTYNADRIDRDIRAGQM 225
The following BLAST results are available for this feature:
BLAST of Spo23318.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902186681|gb|KNA10761.1|1.3e-12299.5hypothetical protein SOVF_1413... [more]
gi|731332575|ref|XP_010677278.1|1.4e-9580.9PREDICTED: uncharacterized pro... [more]
gi|764590674|ref|XP_011465170.1|9.5e-8171.3PREDICTED: uncharacterized pro... [more]
gi|802673341|ref|XP_012081589.1|2.1e-8069.2PREDICTED: uncharacterized pro... [more]
gi|470128670|ref|XP_004300259.1|6.2e-8071.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo23318.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QW78_SPIOL9.2e-12399.5Uncharacterized protein OS=Spi... [more]
A0A0J8F6X3_BETVU9.5e-9680.9Uncharacterized protein OS=Bet... [more]
A0A067K112_JATCU1.5e-8069.2Uncharacterized protein OS=Jat... [more]
F6HTA3_VITVI9.6e-8070.5Putative uncharacterized prote... [more]
B9N2Q0_POPTR8.1e-7971.8Ubiquitin family protein OS=Po... [more]
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BLAST of Spo23318.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23318.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G35360.19.5e-7160.4ubiquitin family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 16..78
score: 11
IPR019387Uncharacterised domain SAYSvFNPFAMPF10260SAYSvFNcoord: 157..223
score: 1.1
NoneNo IPR availableGENE3D3.10.20.90coord: 17..95
score: 5.
NoneNo IPR availablePANTHERPTHR13527UNCHARACTERIZEDcoord: 2..228
score: 3.3
NoneNo IPR availablePANTHERPTHR13527:SF0SAYSVFN DOMAIN-CONTAINING PROTEIN 1coord: 2..228
score: 3.3

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding