Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTAGACCATACTCGTATAACTCTTCTTTACTTATGCCCTCTTCTCTTTCTCTCTCCTCAATTTCTCTGCCCCTCCTCTCAAATTAGGGGGTGACCCACACCACCCCCCCAATGTCTCCACCCAAAAACCACCCTCGTCGGCCGTCAGCGCCGCTGTTAAAGCAGAAATCATGGTCGCCGGATTCTTACCGTGAGGAGCTGTGGCTACGCCGTAAAGAACAAAGTGGTCCTCGCCGAAGCAAGAGTCTTACCGATGAAGATTTCGACGAGCTTAAAGCCTGTTTCGAACTCGGATTCGGGTTTAACCCGCCTGAATTGGGACCCGATCAAAGATTATCCGACACTCTCCCTGCTTTAGGTTTTTACTTGGCCGTTAACAAGAGCTATAACGACACCGTTTTGAAGTCTAACAAGTCGTCTTCTTCGTCGTTGTCGTTACTGGGGACTGCTTCTTCGTCGGAAAGTGATTTGTCTCTTTCTTCCCCCGTCGGAAGCCCTCTCTCCATAATTTGCCCAGGTAATTTCTTCTTTATATTTTCTTTTTAATTAATTACTGTCAAAATAATTTAATGAAGCGAGATTTCCGGCGCTGGTTCATGATTACTTTCTTTAGTTGTGTCACGTTTTTGCTCCTTCCTTAAATATCACAATGATGGCGTATATAATGTATGATTTTTATTTCCGTTACTTCCTGATTTGAGTAATTGTTTGTTACGGAGTAGTACACAACTTAATTCGAATATTCGAATTTAACACCATAAACTGCGGATTGAATCATTGAACTGCACCAACAATGATTTATTCCGTTCTAACAATGATTGAAAATTCGTTTCAATTTTCAAATGTAGTTAATCCTATGGGCAATAGAAAGTACAACTTCGGTTTTACATTGGGGTGAACACGAAATCGTTTTGATAAAAGTTTGGTTGGAGCTCGATTAATCCTATAAGTAACCAAGTTTGAGCTTGAATTATACAGTAGTTGGGTAAATAAACAAAGAAAAATTTACCAATTACTACCTAGATCTTTAGTGACTTTGTAAATTACTTTTTTTTTTTTTTTTAAGTTGTCAATTACTACCTAGATGAATAGGCGTTTAGTTATTGCGGCCAATTACTACTTTAACCCATATTCTGATCCATTTAATTATTTAAATTAATTAATAAAAATCAAAATCAAAATCAAAACTAATTAAATTAGAAATCTGAAAATACCCCAAAAAAATAATAAAAATAAATCAAACTCCCTAATTAATCTGAGTATAGACTGTATTTTTGTCACGGAATTAGGAATTAGAATTAGGCTAGAATTCTAATTCTAATTCTAATACCAAAGTCTTGGAGTTTGACATATATTCTTATTCTAGGCATTAGTATTTAGGCAATTCTCTAATACTTACTAAGGGAAACCCACGTACCATATAATTAGGCATATATTTGTACTATAGAATTCATGATTCATCAATAACATATTCTAAGCTTTGATCTCTCAATAATATTTTACAGTTTTTGGGTCGGAAACACTACAATTTTCTCTTTTTTATTCTTAATCGGTTTACTCTATTAACTTAAGTTTTTAAATTAAGTTTTTAAATTACGATGTTAATAATGATGTATTATGATGGATGCAGGTGATGATCCAAAGACAATTAAGACAAGGTTGAGACATTGGGCACAGGCAGTTGCCTGTTCAGTGAAGCAATGGTGATTAATCGCGTATACATCTGATCCATAAGCTTAAACAAACTATTACAGGGGTTAACTAGCTTGAACATAACCAAGGACTAATAGCTTTTCTTTACCAAAATTAACCCAAAACATCCTTGAACTAATTTACTTTAATTACATTTTAACAATGTTGTTATATGTTAATCTCATTTCTCACCTTCTCTTTTATAGCGAAAATACCATAGTTAGCTGATATATAATATATGTCGTTGCACTCAATGTGACCCCAACTTTGGTTTAATTTGATTAATTTTACTTGGGTTTTGATTCAGT AACTAGACCATACTCGTATAACTCTTCTTTACTTATGCCCTCTTCTCTTTCTCTCTCCTCAATTTCTCTGCCCCTCCTCTCAAATTAGGGGGTGACCCACACCACCCCCCCAATGTCTCCACCCAAAAACCACCCTCGTCGGCCGTCAGCGCCGCTGTTAAAGCAGAAATCATGGTCGCCGGATTCTTACCGTGAGGAGCTGTGGCTACGCCGTAAAGAACAAAGTGGTCCTCGCCGAAGCAAGAGTCTTACCGATGAAGATTTCGACGAGCTTAAAGCCTGTTTCGAACTCGGATTCGGGTTTAACCCGCCTGAATTGGGACCCGATCAAAGATTATCCGACACTCTCCCTGCTTTAGGTTTTTACTTGGCCGTTAACAAGAGCTATAACGACACCGTTTTGAAGTCTAACAAGTCGTCTTCTTCGTCGTTGTCGTTACTGGGGACTGCTTCTTCGTCGGAAAGTGATTTGTCTCTTTCTTCCCCCGTCGGAAGCCCTCTCTCCATAATTTGCCCAGGTGATGATCCAAAGACAATTAAGACAAGGTTGAGACATTGGGCACAGGCAGTTGCCTGTTCAGTGAAGCAATGGTGATTAATCGCGTATACATCTGATCCATAAGCTTAAACAAACTATTACAGGGGTTAACTAGCTTGAACATAACCAAGGACTAATAGCTTTTCTTTACCAAAATTAACCCAAAACATCCTTGAACTAATTTACTTTAATTACATTTTAACAATGTTGTTATATGTTAATCTCATTTCTCACCTTCTCTTTTATAGCGAAAATACCATAGTTAGCTGATATATAATATATGTCGTTGCACTCAATGTGACCCCAACTTTGGTTTAATTTGATTAATTTTACTTGGGTTTTGATTCAGT ATGTCTCCACCCAAAAACCACCCTCGTCGGCCGTCAGCGCCGCTGTTAAAGCAGAAATCATGGTCGCCGGATTCTTACCGTGAGGAGCTGTGGCTACGCCGTAAAGAACAAAGTGGTCCTCGCCGAAGCAAGAGTCTTACCGATGAAGATTTCGACGAGCTTAAAGCCTGTTTCGAACTCGGATTCGGGTTTAACCCGCCTGAATTGGGACCCGATCAAAGATTATCCGACACTCTCCCTGCTTTAGGTTTTTACTTGGCCGTTAACAAGAGCTATAACGACACCGTTTTGAAGTCTAACAAGTCGTCTTCTTCGTCGTTGTCGTTACTGGGGACTGCTTCTTCGTCGGAAAGTGATTTGTCTCTTTCTTCCCCCGTCGGAAGCCCTCTCTCCATAATTTGCCCAGGTGATGATCCAAAGACAATTAAGACAAGGTTGAGACATTGGGCACAGGCAGTTGCCTGTTCAGTGAAGCAATGGTGA MSPPKNHPRRPSAPLLKQKSWSPDSYREELWLRRKEQSGPRRSKSLTDEDFDELKACFELGFGFNPPELGPDQRLSDTLPALGFYLAVNKSYNDTVLKSNKSSSSSLSLLGTASSSESDLSLSSPVGSPLSIICPGDDPKTIKTRLRHWAQAVACSVKQW Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo22915.1 vs. NCBI nr
Match: gi|902114558|gb|KNA03857.1| (hypothetical protein SOVF_205180 [Spinacia oleracea]) HSP 1 Score: 320.9 bits (821), Expect = 1.300e-84 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo22915.1 vs. NCBI nr
Match: gi|731373324|ref|XP_010666615.1| (PREDICTED: proline-rich protein 11-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 229.6 bits (584), Expect = 3.900e-57 Identity = 129/177 (72.88%), Postives = 139/177 (78.53%), Query Frame = 1
BLAST of Spo22915.1 vs. NCBI nr
Match: gi|225438710|ref|XP_002282456.1| (PREDICTED: uncharacterized protein LOC100250717 [Vitis vinifera]) HSP 1 Score: 170.6 bits (431), Expect = 2.200e-39 Identity = 94/155 (60.65%), Postives = 110/155 (70.97%), Query Frame = 1
BLAST of Spo22915.1 vs. NCBI nr
Match: gi|728828989|gb|KHG08432.1| (Membrane insertase YidC [Gossypium arboreum]) HSP 1 Score: 170.6 bits (431), Expect = 2.200e-39 Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of Spo22915.1 vs. NCBI nr
Match: gi|590704772|ref|XP_007047252.1| (Uncharacterized protein TCM_000612 [Theobroma cacao]) HSP 1 Score: 170.2 bits (430), Expect = 2.800e-39 Identity = 95/159 (59.75%), Postives = 113/159 (71.07%), Query Frame = 1
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q993_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205180 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 9.100e-85 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7M3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003240 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.800e-57 Identity = 129/177 (72.88%), Postives = 139/177 (78.53%), Query Frame = 1
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N6X4_GOSAR (Membrane insertase YidC OS=Gossypium arboreum GN=F383_35741 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.500e-39 Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Match: F6H4K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00660 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.500e-39 Identity = 94/155 (60.65%), Postives = 110/155 (70.97%), Query Frame = 1
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Match: A0A061DGA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000612 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.000e-39 Identity = 95/159 (59.75%), Postives = 113/159 (71.07%), Query Frame = 1
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Match: AT4G33985.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 138.3 bits (347), Expect = 4.200e-33 Identity = 84/160 (52.50%), Postives = 105/160 (65.62%), Query Frame = 1
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Match: AT3G50350.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 112.1 bits (279), Expect = 3.200e-25 Identity = 65/104 (62.50%), Postives = 71/104 (68.27%), Query Frame = 1
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Match: AT2G15590.2 (Protein of unknown function (DUF1685)) HSP 1 Score: 109.0 bits (271), Expect = 2.700e-24 Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 1
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Match: AT5G28690.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 95.5 bits (236), Expect = 3.100e-20 Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 1
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Match: AT3G04700.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 94.0 bits (232), Expect = 9.100e-20 Identity = 73/172 (42.44%), Postives = 91/172 (52.91%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22915.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22915.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22915.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo22915.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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