Spo22401.1 (mRNA)

Overview
NameSpo22401.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
Locationchr3 : 7964352 .. 7969786 (-)
Sequence length1846
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGGTCACGTGACCCAGGAATTTTTTGGGAAAAAATTTTAAAAAAAATCACCCAAAAATGTTCAGACCTATTTCGCGTAACACCTACTCCTCTCCTCCTCTGCTCCCCACAGCGCCGCCCAGGCTGCCCACTTGCCCAGCCCTCAGCCGTCACCGTCACCGGTACTTAGGTCCACCAATGTGACCGGCTCACAGGTCCACCACCGTCACCAGCTCTGCGTCTCAGCTCACCGCGCGCCCAGCCGCCCACTACGACGTAGTCTACCGTCTACAAGAAGCTGAACTGCCGTCTGCTGAAGCTCCGCCGGACCGCCCCTCACCATTCACCATTCTTCAAGGACTCAAGGTTGGTCTTTAATTGCTTCATGTTTATGTTTTATTGCAATTTAGGATTGATTTCTCATGTTAATTAGTAAACTTCCAATTATTGGTGATTGGAATTGAGAGATTAGTATTATTATGAGACTGATTCTTAAGTTTTCCATTAAACATCTGAATTATTTATTAATCATGCTCTTTATTCGTTAATTAGAGCCATGATTATGTTTTATATCGTGGAATTTGGACTCTGGTTCTGAAACTAGTGTATTCTTTTTATCAAATTGAAACAATCTGGGAAAAAAAATCTACAATTACAGAGCGAAGAAATACTTTAAAAGCTTGTTCAGTTTGAAGTCTCAAAAACATTTGTTCGTTTTGTATAATGATCAAAAGTGATTAATTTAGTGCCTGCGTGAAATAAAATAAATTGATTAACAGAGAGTTATCGCCATTATTTAGTCCACTGACTTCTGAATTTAATTCAAGAGTTTGTTTTGATTTTTCAATATTTAATTCATGACTTTGTTCTGATTTTTAGACATTTAATTCATGAGTTTGTTTTGATTTTTCAATTTCTTGCTGTTGTTATTTGTTAACAGATTAGTTCATATAAACCCTCATCATTGTTCTTGTTATGGAGGGAATTTTGAAGAAATATCAACAGAAATTCAGGAAAGTACGAGAAGAAATGGATCGTTGGGAAGACCTCCAGTCCCGCTTAATGTCCCAATTCTCGAATGCTTCTTCCATCATTGGAAGACTTCAGGTCTCTAACTTTTAACTTCAATTTTTAATTTTTTTGTCTATTTGATTGTGTGGGAAGATTAAAGTTCTAATCTTTGTGCTTTAGTTTCTGAAATTGATTATGATTTTGGAAAATTTTTGTTTAGATGATTGGAGATAAGAAGAATTATGGTAGTTTGAAGGGTGTTAATGGGGTTGAAGATGCAGTTTTGCAGAAGCAAATGGAGTCTTTGGAGACAATTTTGCTTTCAATTAAGAAGACTGTGTTAGTTCAATTACTTTCCTCAGCACTTTACTTTTGTCGCTTTTTTGTTTGCAATTGAACATCTCTATTGCTCTTATGTGTTACTTCGGCTTTTCATTTTACTTTAAGTGCCCGTGTTAGAGGCTCGATACTTGGAGATAGATTTGACACTTAGATACTTCAGTTTGGAATAGTATGATACAGAATTTTCAATTTGTTTTTAAGTACTTTGTTTTTGTTGCTACATTGTTAGAAATTGCATATCAATTTCTTTCTCGAATCGTAGTATGTGGTAAGAAGATGATATGGATTCACTATTCCAAAAAAAATATAAGCTAAGTGATTATAATGAGCATATGAGCTGAATTTGTTTGCCTCAATTTAACACCTCCATCGCCCTTTTTAATAGAATGTGGTAAGAAGACTATCTGACTTGTGTGCTCATTGTTAGAGACTTAGAGATCAGTTTGGTAAAGTGAGAACAATAGCTAAGGAAACACTTTGGCTGACGGTTGATTGAAAACTTATGCTTGATGATCATGTACAACTATTATCCACCCCTCATGGCCTGAATTTATGTCATTCATATGAGGATTCGTTGTCAAGATAGCATGAAGTAGATTCCTGAAGACATTAAAATAACTGGCTACTCTTTGTAGGGAAGATTTCCACAGTATTGTACTGTCATTAGAAAAGATGGTCCGTGACAGTAAGCAGCTTGTTCAAGGAGGATCTCATCAGCGTTCCACTAAACAACTGCAGCAGAGAGTGGGGTTGAAACCAAGTCTTTCAGATTGCTTAGATGGGCTTGCTATTCTGCTGGAGATGCACAACTCTGAGTAGGTTTTTTATTTTTTGTTTTTTGGCATGTTCTTAATTATCTACAAAGTCTAAGAAATGTGATTATGACTTATGAGCACCACGGTATAAATTACAAGTGAGGAGAGACATACTTAAAGATTAACTCTCCTCATTGCTTTGGTTGGTCCATTGCTTCCAACCTTCTATAAACCTTGTGTTATCGGTTGGTAATTGCCATTCACTCTCTCTCTTTTTTGTTTTTACATCTCCCTTTCTTTGGGTTCTGTTGGGGAGAGAGGGGAGGAGAGAAGCAGTGGCGTATCCAGGATTTTGAAATAGGGTAGACAGTAGACTATACTACATACGTAGTAGTATATAATAAAATAAATGACATGTAGGTAATATATTATAGAGAGTATACATAAAATTACTTATGTACATATAGGAGAAAATAATAAAAGAAACTTATAACTACGAAGTATTTCCTTAACAAAAGTGTATACAATTAATGGTTATTTTTTGAGAAAAAATAAAAATATACCATGATTTGATCTTCATACAACATATAGTAATATCTATTATAATTACTATAGAACAACTATTTTGCCTAATATACTACTCCACTTCTCATTATTCAGATTAATGTATTTCGTATTACAATACTTTTTTTAGGAGTTACGCTTGTAAAATAAATATTGATTAAGGATGTTGTATGTGAACTTGGAATTGCATTGAGTTGTTGGATGAATATAAATTATGCAATAAAATGATCAAAGTAAAAAAATCATCTTGTACATAAGAAAAATTGTTGCCACTACTCGAACCCGCGACCTGTTGAATTCTATAAGTAGTAACAACCATTGAGCTGCAAATACGTTTATGTATCCTTTAGGGTAATATTAGTATAAATGAGAATTAATGACTTTGTTTCAGAATGTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGTAGACATTTGTCTACCCTAAGTACTAGTAGATCCGCCCATGGAGAGAAGGATTTGAGGGTTCATGGGAAAAGGCTGTTTTTCAATTCAGACTGTCATAGTTTCCTTTATTCACTTTCCCATCTATGCATGTAGGTCAAAGCATATTAATGCTTACATTTTCTCCCTTTTGCTAATGCAGGTACCTTCTGAAATCATCAGTTGTTTCTGCACTCTTGAATATTGCTTTAAAGCCCAGGTAAATTAAGATAGACGATGGGTTTTTCCTTGTATGCCGCATTGTTAGTATCTTTGCCCTTTCCAGTATTGACTTAGCAAAGTGGTTGCTTATGATTAGGAATTAGAATAATGAAGAAAACAAGGGTGGTGCTTAGGTCTTACAAATGTTTTACAGTGCAGAAAATTACCAACTATTACAGTTCAGAAGCTAGACTATGTTGATGTTACTGTCATTGCCTAAAGGATGTTATTTCACTGTTATGATTTGTGACTACATTTTGTCAAATTCCTGTTGTGCTATAGTGCTATTGTGTTGAGAGATATGTTACCCTATTTGGCTATTATTGGTACCTTTGGGTCTTAGAAGTTTCGTAAGCATCGATTGTGTTTGAAAATGTTGTGTTTGTGATTTACTTCTTGGCTATTTCTATGTTTTGATTCCTGTGACCCTGACTAAGGTTCAACTTCATTCAGTTCCAAAGACCTGGGAGCGTTGCGCCAGCTTTTGTTCGATCAGCCCAATATCCCTAGAGACGAAGGTATGCGTGCTATTTTTGAGATAAAAGCTGAAGTCAGAATATCTGTCATGAACTCATGATATGTGACAAGTAACCGAGAATCCATAGGTCTTCCGTTTATTAATCATCTCTTACTCATAATTTACTTTTGGAGTTTTGGGTATTGACTGGATCAATGGAGTGGCCAAGTATTTATATTGCATAAAATAAAGAGAGGCATAACCTGGTAGTCCTGGACTCCTGGTTACAGTTTCCTAGCAGACCCAGCATTGGCCTTTTAAACCGCATATTTTTTACGCGTATATTCTAACTTTTGCCTTTGACTTCACAAATGTTAAAACTTATTCCTGGTCATTGACCTGGTTTATGGAAGAGAAGGTTTAATCTGGGAACATCTGCAGTTTACCAAAAAGTCGGAATTGTTGCTTTCATATTTGGATTTCTCTTTTCTATTTTGTTGGCGGACTTGCAGATCTGATAACTGTGATCTTTATGAGCTGCCTGTAGAAATAGAAATTCTTATGCCATCTCATGTTGTGGATTGCAGTGCAGTTCATTTATGACATAATTTTCGCCGAAGACATTTGTTAAAATGGACATCAGTCACTGGTAATTTGAAGCTGGAATTAAAGTGCAGTTCAACATGAGTGATTCTACTTCAGTCATCTGAGGCTGGAGTTCAGTACACCTGCCTCCTTGGCATGGTTGGCGGGTTTATGACACGCAGTACTCCCTCGCTGAAGCACATCTAATTACAAGGCATGTCAGTATCACATATAGCCCGCAATTTTCCTGTGCAGATCAGCAAATGATAGAAAAGATGATTCTGAATCCCTCAAGTGTCGCTCGTGACTGCCTGGTGTTGCTGATTTTTCTTGGGAAAATCCCTGAAGAACAGAAAACTTGATTTGTATGCAATTAATTATGTTCATTTCATTGATTAATTTACCAGAAAACTTTTGTCTAAATTTCCATTCTTCATTTGAAACAAGTACAAAGAAATCAAGTGAAATACAATGAACAAGAATAAGCTTTATACATTGCAGGGTATACTTCAGCTACAATGATTAAGCAAACATCAGCCAGAAATCATTCACAATAACATCCTCATTCTTTCTGAGTTTCTTCAGCATCACAGATTCACAGCGATCCTTGCCTCCGGTCCAAGATTGAGGAGCATGACTATTCAACATAGTCTGAACTCTGAAGTTCCGAATCACGGGAATCACCACGATTCTCTGCCATAAACGGTCTGAAAAAAGGCGTTGCCATCCTCCCCTTCAAATGGGTCCGTTTTGCGTCTCCTCTCAGTTGGACAAAGAGCAGAGATTGCGGATATGGTCATGAAACCCATGCTTATCATGAATATTGTTCCGGAAGCTAACAAAATGATTGAAACCATTTTTAATGTGGTGAAAAGTTCTTTTGAGTTGATATTGTAAGTTGTAAGTCTGAAACTTTTTTGCTAATATACTCAATGTTTTCATCTTCATCCCCTTTAAACATCCTTCTTTAACCCCCTTTCCAAGTTTGTAGAGACCTTTTGCTTCTTTTACCATTTCTGGGGTTAAGTTTTGATGTTTTCCACATGGCCT

mRNA sequence

GTAGGTCACGTGACCCAGGAATTTTTTGGGAAAAAATTTTAAAAAAAATCACCCAAAAATGTTCAGACCTATTTCGCGTAACACCTACTCCTCTCCTCCTCTGCTCCCCACAGCGCCGCCCAGGCTGCCCACTTGCCCAGCCCTCAGCCGTCACCGTCACCGGTACTTAGGTCCACCAATGTGACCGGCTCACAGGTCCACCACCGTCACCAGCTCTGCGTCTCAGCTCACCGCGCGCCCAGCCGCCCACTACGACGTAGTCTACCGTCTACAAGAAGCTGAACTGCCGTCTGCTGAAGCTCCGCCGGACCGCCCCTCACCATTCACCATTCTTCAAGGACTCAAGATTAGTTCATATAAACCCTCATCATTGTTCTTGTTATGGAGGGAATTTTGAAGAAATATCAACAGAAATTCAGGAAAGTACGAGAAGAAATGGATCGTTGGGAAGACCTCCAGTCCCGCTTAATGTCCCAATTCTCGAATGCTTCTTCCATCATTGGAAGACTTCAGATGATTGGAGATAAGAAGAATTATGGTAGTTTGAAGGGTGTTAATGGGGTTGAAGATGCAGTTTTGCAGAAGCAAATGGAGTCTTTGGAGACAATTTTGCTTTCAATTAAGAAGACTGTGGAAGATTTCCACAGTATTGTACTGTCATTAGAAAAGATGGTCCGTGACAGTAAGCAGCTTGTTCAAGGAGGATCTCATCAGCGTTCCACTAAACAACTGCAGCAGAGAGTGGGGTTGAAACCAAGTCTTTCAGATTGCTTAGATGGGCTTGCTATTCTGCTGGAGATGCACAACTCTGAGTACCTTCTGAAATCATCAGTTGTTTCTGCACTCTTGAATATTGCTTTAAAGCCCAGTTCCAAAGACCTGGGAGCGTTGCGCCAGCTTTTGTTCGATCAGCCCAATATCCCTAGAGACGAAGTGCAGTTCATTTATGACATAATTTTCGCCGAAGACATTTGTTAAAATGGACATCAGTCACTGGTAATTTGAAGCTGGAATTAAAGTGCAGTTCAACATGAGTGATTCTACTTCAGTCATCTGAGGCTGGAGTTCAGTACACCTGCCTCCTTGGCATGGTTGGCGGGTTTATGACACGCAGTACTCCCTCGCTGAAGCACATCTAATTACAAGGCATGTCAGTATCACATATAGCCCGCAATTTTCCTGTGCAGATCAGCAAATGATAGAAAAGATGATTCTGAATCCCTCAAGTGTCGCTCGTGACTGCCTGGTGTTGCTGATTTTTCTTGGGAAAATCCCTGAAGAACAGAAAACTTGATTTGGTATACTTCAGCTACAATGATTAAGCAAACATCAGCCAGAAATCATTCACAATAACATCCTCATTCTTTCTGAGTTTCTTCAGCATCACAGATTCACAGCGATCCTTGCCTCCGGTCCAAGATTGAGGAGCATGACTATTCAACATAGTCTGAACTCTGAAGTTCCGAATCACGGGAATCACCACGATTCTCTGCCATAAACGGTCTGAAAAAAGGCGTTGCCATCCTCCCCTTCAAATGGGTCCGTTTTGCGTCTCCTCTCAGTTGGACAAAGAGCAGAGATTGCGGATATGGTCATGAAACCCATGCTTATCATGAATATTGTTCCGGAAGCTAACAAAATGATTGAAACCATTTTTAATGTGGTGAAAAGTTCTTTTGAGTTGATATTGTAAGTTGTAAGTCTGAAACTTTTTTGCTAATATACTCAATGTTTTCATCTTCATCCCCTTTAAACATCCTTCTTTAACCCCCTTTCCAAGTTTGTAGAGACCTTTTGCTTCTTTTACCATTTCTGGGGTTAAGTTTTGATGTTTTCCACATGGCCT

Coding sequence (CDS)

ATGGAGGGAATTTTGAAGAAATATCAACAGAAATTCAGGAAAGTACGAGAAGAAATGGATCGTTGGGAAGACCTCCAGTCCCGCTTAATGTCCCAATTCTCGAATGCTTCTTCCATCATTGGAAGACTTCAGATGATTGGAGATAAGAAGAATTATGGTAGTTTGAAGGGTGTTAATGGGGTTGAAGATGCAGTTTTGCAGAAGCAAATGGAGTCTTTGGAGACAATTTTGCTTTCAATTAAGAAGACTGTGGAAGATTTCCACAGTATTGTACTGTCATTAGAAAAGATGGTCCGTGACAGTAAGCAGCTTGTTCAAGGAGGATCTCATCAGCGTTCCACTAAACAACTGCAGCAGAGAGTGGGGTTGAAACCAAGTCTTTCAGATTGCTTAGATGGGCTTGCTATTCTGCTGGAGATGCACAACTCTGAGTACCTTCTGAAATCATCAGTTGTTTCTGCACTCTTGAATATTGCTTTAAAGCCCAGTTCCAAAGACCTGGGAGCGTTGCGCCAGCTTTTGTTCGATCAGCCCAATATCCCTAGAGACGAAGTGCAGTTCATTTATGACATAATTTTCGCCGAAGACATTTGTTAA

Protein sequence

MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNGVEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQRVGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNIPRDEVQFIYDIIFAEDIC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo22401Spo22401gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo22401.1Spo22401.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22401.1.utr5p.2Spo22401.1.utr5p.2five_prime_UTR
Spo22401.1.utr5p.1Spo22401.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22401.1.CDS.6Spo22401.1.CDS.6CDS
Spo22401.1.CDS.5Spo22401.1.CDS.5CDS
Spo22401.1.CDS.4Spo22401.1.CDS.4CDS
Spo22401.1.CDS.3Spo22401.1.CDS.3CDS
Spo22401.1.CDS.2Spo22401.1.CDS.2CDS
Spo22401.1.CDS.1Spo22401.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22401.1.utr3p.2Spo22401.1.utr3p.2three_prime_UTR
Spo22401.1.utr3p.1Spo22401.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22401.1.exon.8Spo22401.1.exon.8exon
Spo22401.1.exon.7Spo22401.1.exon.7exon
Spo22401.1.exon.6Spo22401.1.exon.6exon
Spo22401.1.exon.5Spo22401.1.exon.5exon
Spo22401.1.exon.4Spo22401.1.exon.4exon
Spo22401.1.exon.3Spo22401.1.exon.3exon
Spo22401.1.exon.2Spo22401.1.exon.2exon
Spo22401.1.exon.1Spo22401.1.exon.1exon


Homology
[Close]
BLAST of Spo22401.1 vs. NCBI nr
Match: gi|902185993|gb|KNA10594.1| (hypothetical protein SOVF_142870 [Spinacia oleracea])

HSP 1 Score: 375.6 bits (963), Expect = 5.500e-101
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           PRDEVQFIYDIIFAEDIC
Sbjct: 181 PRDEVQFIYDIIFAEDIC 198
[Close]
BLAST of Spo22401.1 vs. NCBI nr
Match: gi|731321288|ref|XP_010671271.1| (PREDICTED: uncharacterized protein At5g43822 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 315.1 bits (806), Expect = 8.800e-83
Identity = 165/198 (83.33%), Postives = 181/198 (91.41%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGILKKYQQKF+KVREEMD WE+LQSRL+SQFSNASSII RLQ+IGDKKNYG+LKGV+G
Sbjct: 1   MEGILKKYQQKFKKVREEMDNWENLQSRLISQFSNASSIIQRLQVIGDKKNYGNLKGVDG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +EDAVLQKQMESLE  LLS+K T+E+FH IVLSLEKMVRDSKQL+ GGS Q STKQLQQR
Sbjct: 61  IEDAVLQKQMESLENNLLSMKNTMEEFHKIVLSLEKMVRDSKQLLGGGSRQPSTKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KPSLSDCLDGL IL EMH SEYLLK+SVVSALL IA K SS DLGALRQLL DQPNI
Sbjct: 121 MGIKPSLSDCLDGLVILQEMHKSEYLLKTSVVSALLKIAFKASSNDLGALRQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           PRDEVQFI+DIIFAE+IC
Sbjct: 181 PRDEVQFIFDIIFAENIC 198
[Close]
BLAST of Spo22401.1 vs. NCBI nr
Match: gi|225457586|ref|XP_002272933.1| (PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera])

HSP 1 Score: 282.7 bits (722), Expect = 4.900e-73
Identity = 143/198 (72.22%), Postives = 176/198 (88.89%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEG++KKYQQKFRKVR+E  RW++LQSRL+SQF NASSII RLQ I + KNYG+LK ++G
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           + DAVL+KQMESLETILLS+KKT+++FH IVLSLEK+VRD +QLV+GGS + + KQLQQR
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KPSL+DCLDGL++L EMH SEYLLKSSVVSAL  + LKPS+ DLGAL QLL DQPNI
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKPSASDLGALHQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EVQFI+DI+FAE+IC
Sbjct: 181 PKEEVQFIFDIVFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. NCBI nr
Match: gi|802605140|ref|XP_012073629.1| (PREDICTED: uncharacterized protein At5g43822 [Jatropha curcas])

HSP 1 Score: 276.6 bits (706), Expect = 3.500e-71
Identity = 142/198 (71.72%), Postives = 171/198 (86.36%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           ME I+KKYQQ+FRKVREEMD+W+ LQSRL+SQF NASSII RLQ+I D  NYG+L GV+G
Sbjct: 1   MESIVKKYQQRFRKVREEMDKWDHLQSRLLSQFINASSIISRLQVIRDSNNYGNLSGVDG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           + DAVL+KQM+SLETILLS+ KT+EDF SIVL LEKM +D +QLV+GG +Q +TKQLQQR
Sbjct: 61  IVDAVLRKQMDSLETILLSMNKTLEDFRSIVLFLEKMYKDGRQLVKGGPNQLTTKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VG+KP L+DCLDGL IL +MH SEYLLKSS+VSALL + LKPSS DL AL+QL+ DQPNI
Sbjct: 121 VGVKPCLADCLDGLMILHDMHRSEYLLKSSLVSALLALTLKPSSGDLAALQQLMVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EV  I+DIIFAE+IC
Sbjct: 181 PKEEVHLIFDIIFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. NCBI nr
Match: gi|567885675|ref|XP_006435396.1| (hypothetical protein CICLE_v10002549mg [Citrus clementina])

HSP 1 Score: 269.6 bits (688), Expect = 4.300e-69
Identity = 136/198 (68.69%), Postives = 173/198 (87.37%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGI+KKYQQKF+K++EEM+RW++LQSRL+SQF NASSII RLQ++ D K+YG+L  + G
Sbjct: 1   MEGIVKKYQQKFKKIKEEMNRWDELQSRLISQFKNASSIIERLQILQDAKHYGNLNSIGG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +E AVL+KQMESL+TILLS++KT+E+F  IVLSLEK  RD KQLV+GGS+Q + KQLQQR
Sbjct: 61  IEAAVLRKQMESLQTILLSMQKTLEEFRGIVLSLEKFHRDGKQLVRGGSNQLTVKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VGLKP+L+DCLDGL IL +MHNSEY+LK S+VS L  +A+KP + DLGAL+QLL DQPNI
Sbjct: 121 VGLKPTLADCLDGLMILWDMHNSEYVLKISLVSTLSTLAVKPCTFDLGALQQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EVQ+I +IIFAE+IC
Sbjct: 181 PKEEVQYISEIIFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.800e-101
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           PRDEVQFIYDIIFAEDIC
Sbjct: 181 PRDEVQFIYDIIFAEDIC 198
[Close]
BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CWF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.200e-83
Identity = 165/198 (83.33%), Postives = 181/198 (91.41%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGILKKYQQKF+KVREEMD WE+LQSRL+SQFSNASSII RLQ+IGDKKNYG+LKGV+G
Sbjct: 1   MEGILKKYQQKFKKVREEMDNWENLQSRLISQFSNASSIIQRLQVIGDKKNYGNLKGVDG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +EDAVLQKQMESLE  LLS+K T+E+FH IVLSLEKMVRDSKQL+ GGS Q STKQLQQR
Sbjct: 61  IEDAVLQKQMESLENNLLSMKNTMEEFHKIVLSLEKMVRDSKQLLGGGSRQPSTKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KPSLSDCLDGL IL EMH SEYLLK+SVVSALL IA K SS DLGALRQLL DQPNI
Sbjct: 121 MGIKPSLSDCLDGLVILQEMHKSEYLLKTSVVSALLKIAFKASSNDLGALRQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           PRDEVQFI+DIIFAE+IC
Sbjct: 181 PRDEVQFIFDIIFAENIC 198
[Close]
BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Match: D7UDC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.400e-73
Identity = 143/198 (72.22%), Postives = 176/198 (88.89%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEG++KKYQQKFRKVR+E  RW++LQSRL+SQF NASSII RLQ I + KNYG+LK ++G
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           + DAVL+KQMESLETILLS+KKT+++FH IVLSLEK+VRD +QLV+GGS + + KQLQQR
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KPSL+DCLDGL++L EMH SEYLLKSSVVSAL  + LKPS+ DLGAL QLL DQPNI
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKPSASDLGALHQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EVQFI+DI+FAE+IC
Sbjct: 181 PKEEVQFIFDIVFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Match: A0A067GZY6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028912mg PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.000e-69
Identity = 136/198 (68.69%), Postives = 173/198 (87.37%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGI+KKYQQKF+K++EEM+RW++LQSRL+SQF NASSII RLQ++ D K+YG+L  + G
Sbjct: 1   MEGIVKKYQQKFKKIKEEMNRWDELQSRLISQFKNASSIIERLQILQDAKHYGNLNSIGG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +E AVL+KQMESL+TILLS++KT+E+F  IVLSLEK  RD KQLV+GGS+Q + KQLQQR
Sbjct: 61  IEAAVLRKQMESLQTILLSMQKTLEEFRGIVLSLEKFHRDGKQLVRGGSNQLTVKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VGLKP+L+DCLDGL IL +MHNSEY+LK S+VS L  +A+KP + DLGAL+QLL DQPNI
Sbjct: 121 VGLKPTLADCLDGLMILWDMHNSEYVLKISLVSTLSTLAVKPCTFDLGALQQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EVQ+I +IIFAE+IC
Sbjct: 181 PKEEVQYISEIIFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Match: V4TG37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002549mg PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.000e-69
Identity = 136/198 (68.69%), Postives = 173/198 (87.37%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           MEGI+KKYQQKF+K++EEM+RW++LQSRL+SQF NASSII RLQ++ D K+YG+L  + G
Sbjct: 1   MEGIVKKYQQKFKKIKEEMNRWDELQSRLISQFKNASSIIERLQILQDAKHYGNLNSIGG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +E AVL+KQMESL+TILLS++KT+E+F  IVLSLEK  RD KQLV+GGS+Q + KQLQQR
Sbjct: 61  IEAAVLRKQMESLQTILLSMQKTLEEFRGIVLSLEKFHRDGKQLVRGGSNQLTVKQLQQR 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           VGLKP+L+DCLDGL IL +MHNSEY+LK S+VS L  +A+KP + DLGAL+QLL DQPNI
Sbjct: 121 VGLKPTLADCLDGLMILWDMHNSEYVLKISLVSTLSTLAVKPCTFDLGALQQLLVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDIC 199
           P++EVQ+I +IIFAE+IC
Sbjct: 181 PKEEVQYISEIIFAEEIC 198
[Close]
BLAST of Spo22401.1 vs. ExPASy Swiss-Prot
Match: Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.900e-50
Identity = 103/197 (52.28%), Postives = 150/197 (76.14%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           ME +++K+QQKFRK +EEM++WE LQ R +S F NASSII RLQ + +  +YG+L+ + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +EDAV+Q+QM  LE++L S+K  +E+F   VL+ EK+ RD  QL +    + S +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLRE---IESSKRRVEER 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KP ++DCL+GL+IL +MH SEY LKSS++S L  + LKPS  DL AL+ L+ DQPNI
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKPSPGDLNALQYLVVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDI 198
           P+DEVQ I+D+IFAE+I
Sbjct: 181 PKDEVQHIFDVIFAEEI 194
[Close]
BLAST of Spo22401.1 vs. TAIR (Arabidopsis)
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 5.600e-51
Identity = 103/197 (52.28%), Postives = 150/197 (76.14%), Query Frame = 1 

		  

Query: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60
           ME +++K+QQKFRK +EEM++WE LQ R +S F NASSII RLQ + +  +YG+L+ + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120
           +EDAV+Q+QM  LE++L S+K  +E+F   VL+ EK+ RD  QL +    + S +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLRE---IESSKRRVEER 120

Query: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNIALKPSSKDLGALRQLLFDQPNI 180
           +G+KP ++DCL+GL+IL +MH SEY LKSS++S L  + LKPS  DL AL+ L+ DQPNI
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKPSPGDLNALQYLVVDQPNI 180

Query: 181 PRDEVQFIYDIIFAEDI 198
           P+DEVQ I+D+IFAE+I
Sbjct: 181 PKDEVQHIFDVIFAEEI 194
The following BLAST results are available for this feature:
BLAST of Spo22401.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902185993|gb|KNA10594.1|5.5e-101100.hypothetical protein SOVF_1428... [more]
gi|731321288|ref|XP_010671271.1|8.8e-8383.3PREDICTED: uncharacterized pro... [more]
gi|225457586|ref|XP_002272933.1|4.9e-7372.2PREDICTED: uncharacterized pro... [more]
gi|802605140|ref|XP_012073629.1|3.5e-7171.7PREDICTED: uncharacterized pro... [more]
gi|567885675|ref|XP_006435396.1|4.3e-6968.6hypothetical protein CICLE_v10... [more]
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BLAST of Spo22401.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QTK1_SPIOL3.8e-101100.Uncharacterized protein OS=Spi... [more]
A0A0J8CWF0_BETVU6.2e-8383.3Uncharacterized protein OS=Bet... [more]
D7UDC1_VITVI3.4e-7372.2Putative uncharacterized prote... [more]
A0A067GZY6_CITSI3.0e-6968.6Uncharacterized protein OS=Cit... [more]
V4TG37_9ROSI3.0e-6968.6Uncharacterized protein OS=Cit... [more]
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BLAST of Spo22401.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5382_ARATH9.9e-5052.2Uncharacterized protein At5g43... [more]
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BLAST of Spo22401.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G43822.15.6e-5152.2Pentatricopeptide repeat (PPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..25
scor
NoneNo IPR availablePANTHERPTHR37904FAMILY NOT NAMEDcoord: 2..197
score: 2.3
NoneNo IPR availablePANTHERPTHR37904:SF1SUBFAMILY NOT NAMEDcoord: 2..197
score: 2.3

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030048 actin filament-based movement
biological_process GO:0051645 Golgi localization
biological_process GO:0051646 mitochondrion localization
biological_process GO:0060151 peroxisome localization
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005509 calcium ion binding