Spo22396.1 (mRNA)

Overview
NameSpo22396.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionKazal-type serine protease inhibitor
Locationchr3 : 7882949 .. 7884162 (-)
Sequence length432
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCCCAATTTTCCAATTTCTCTTTCCTATTCCTCTCTCTCCTCTTAATCACCTTTACCCAAATCGCAAAATGTGACACCCAACCTTCCGTCATTCGATTACCCACCGATTTCGCCGGAGATGCTAAGTTATGCTCGCCTGAAGAATCTTCCCCAAAATCTTGCCCAGTTAAATGTTTTCGACCCGACCCAGTTTGCGGCGAAAATGGGGTTACCTACTGGTGCGGTTGCGCGGATGCTTATTGCTCGGGTACTCGGGTCGCAAAGTTAGGCTATTGTGAGGTGGGAAGTGGTGGGTCGGGTCCATTGTCGGGTCAAGCTTTTCTGTTGGTTCATCTGATATGGCTTATTGTATTGGGGTTTTCTGTTCTTTGTGGTTTACTTTGAAATTTTGAAGGAATTCTTTGTGATTTGTACTAATTCTTTTGGAAGGGATTAATGTATGTAATTGAGCAAATGATTTGATTATAGGGTGTTGTAGACGATAATTGATTTTTATGTATGTAATTAACGGATTATTGTATTGGAAATGAATTTTTTGAGTTGCTTCTTGTGTATGATCTTGTGCATTTGTGCTATTACGATCTTGTGCATTTTTTTGTTGCATTTGTTGCATTTGGTAATGACCTATTTTGTCTTTTCGATCATAAAAGAAGTAGAAGGCACAATTTAAGGATTTTCGACACCTTCGCTTAGGCTCTGTTTGGTAGTGCGTAAAACGTTTTCATTGTAAAATGATTTTTCATGGAAAACATTTTTCAATGAAAAACACAATTCCAAACTAGTTTTCCTTTGTTTGGTACATTAAAGGAAAATGGGAGAAGATGGTGAAGATTGAGGGGAAGAAAGGAGAGGGAGGTAAGGAGTAAAGAAGGAAAAGTGATTTCCCTCCCTTTCAAATGGAAAAGGGTTTTCCATCTTTGAGGGAGTATGGAAAATTGTTTTACATCCGTTACCCAACCAAACAACGTAAAATGGTTGAAAAATGAGAAAATCATTTTCCATGAAAACGTTTTACACCCTACCAAACGGAGCCTTAAACGGGAGAGGCATTATAAACTTTGTAAGTACTTCACGTTTGTTCTTATACCTTCATGGCTTTGTAGCTAAAGAGGGGGAAATAAAAACACAATTTGTTCAAAACATTATTCCGACTAGGCGGGCAAATTTCGACAAAATGTGAGGTAAAAGAGGACAAGCTTCACTGTTAA

mRNA sequence

ATGTTTCCCCAATTTTCCAATTTCTCTTTCCTATTCCTCTCTCTCCTCTTAATCACCTTTACCCAAATCGCAAAATGTGACACCCAACCTTCCGTCATTCGATTACCCACCGATTTCGCCGGAGATGCTAAGTTATGCTCGCCTGAAGAATCTTCCCCAAAATCTTGCCCAGTTAAATGTTTTCGACCCGACCCAGTTTGCGGCGAAAATGGGGTTACCTACTGGTGCGGTTGCGCGGATGCTTATTGCTCGGGTACTCGGGTCGCAAAGTTAGGCTATTGTGAGGTGGGAAGTGGTGGGTCGGGTCCATTGTCGGGTCAAGCTTTTCTGTTGGTTCATCTGATATGGCTTATTGTATTGGGGTTTTCTGTTCTTTGTGGCGGGCAAATTTCGACAAAATGTGAGGTAAAAGAGGACAAGCTTCACTGTTAA

Coding sequence (CDS)

ATGTTTCCCCAATTTTCCAATTTCTCTTTCCTATTCCTCTCTCTCCTCTTAATCACCTTTACCCAAATCGCAAAATGTGACACCCAACCTTCCGTCATTCGATTACCCACCGATTTCGCCGGAGATGCTAAGTTATGCTCGCCTGAAGAATCTTCCCCAAAATCTTGCCCAGTTAAATGTTTTCGACCCGACCCAGTTTGCGGCGAAAATGGGGTTACCTACTGGTGCGGTTGCGCGGATGCTTATTGCTCGGGTACTCGGGTCGCAAAGTTAGGCTATTGTGAGGTGGGAAGTGGTGGGTCGGGTCCATTGTCGGGTCAAGCTTTTCTGTTGGTTCATCTGATATGGCTTATTGTATTGGGGTTTTCTGTTCTTTGTGGCGGGCAAATTTCGACAAAATGTGAGGTAAAAGAGGACAAGCTTCACTGTTAA

Protein sequence

MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCGGQISTKCEVKEDKLHC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo22396Spo22396gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo22396.1Spo22396.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22396.1.CDS.2Spo22396.1.CDS.2CDS
Spo22396.1.CDS.1Spo22396.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22396.1.exon.2Spo22396.1.exon.2exon
Spo22396.1.exon.1Spo22396.1.exon.1exon


Homology
BLAST of Spo22396.1 vs. NCBI nr
Match: gi|902166979|gb|KNA07307.1| (hypothetical protein SOVF_173140 [Spinacia oleracea])

HSP 1 Score: 267.7 bits (683), Expect = 1.200e-68
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1

		  

Query: 1   MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC 60
           MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC
Sbjct: 1   MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC 60

Query: 61  FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL 120
           FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL
Sbjct: 61  FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL 120

Query: 121 GFSVLCG 128
           GFSVLCG
Sbjct: 121 GFSVLCG 127

BLAST of Spo22396.1 vs. NCBI nr
Match: gi|731321318|ref|XP_010671287.1| (PREDICTED: uncharacterized protein LOC104888118 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 207.6 bits (527), Expect = 1.400e-50
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = 1

		  

Query: 1   MFPQFSNFSFLFL-SLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVK 60
           MFP    FS L L SL LI+F Q AK +TQPSVI+LP+DFAG+  +CSPEE + KSCPVK
Sbjct: 1   MFPNNPKFSLLILLSLFLISFLQFAKSETQPSVIQLPSDFAGNHDICSPEEFTGKSCPVK 60

Query: 61  CFRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIV 120
           CFRPDPVCGENGVTYWCGCADA+C+GTRVAKLG+C+VG+GGSGPLSGQA LLVH++WLIV
Sbjct: 61  CFRPDPVCGENGVTYWCGCADAHCAGTRVAKLGFCQVGNGGSGPLSGQALLLVHMVWLIV 120

Query: 121 LGFSVLCG 128
           LGFS+LCG
Sbjct: 121 LGFSLLCG 128

BLAST of Spo22396.1 vs. NCBI nr
Match: gi|703063339|ref|XP_010086937.1| (hypothetical protein L484_001582 [Morus notabilis])

HSP 1 Score: 153.7 bits (387), Expect = 2.500e-34
Identity = 73/117 (62.39%), Postives = 86/117 (73.50%), Query Frame = 1

		  

Query: 11  LFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGEN 70
           LF +LL ++     + D Q S IRLP+D    A  C      P SCPVKCFR DPVCG +
Sbjct: 22  LFTTLLFLSSFPAVRSDEQFSAIRLPSDADTGADPCGKSLERPPSCPVKCFRTDPVCGVD 81

Query: 71  GVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCG 128
           GVTYWCGCADA C+GT+V+KLG+CEVG+GGS PLS QA LLVH++WLIVLGFSVL G
Sbjct: 82  GVTYWCGCADARCAGTKVSKLGFCEVGNGGSAPLSAQALLLVHIVWLIVLGFSVLFG 138

BLAST of Spo22396.1 vs. NCBI nr
Match: gi|702240589|ref|XP_010045336.1| (PREDICTED: uncharacterized protein LOC104434076 [Eucalyptus grandis])

HSP 1 Score: 152.9 bits (385), Expect = 4.200e-34
Identity = 75/114 (65.79%), Postives = 85/114 (74.56%), Query Frame = 1

		  

Query: 16  LLITFTQIAKCDTQ--PSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGENGVT 75
           LL+ F   A+ + Q   S IRLPT+ + D        + P SCPVKCFR DPVCG +GVT
Sbjct: 21  LLLFFPSAARSEPQIPGSAIRLPTEKSSDGGGLCSGAARPGSCPVKCFRADPVCGVDGVT 80

Query: 76  YWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCG 128
           YWCGCADA CSG  VAKLGYCEVG+GGSGPLSGQA LLVH++WLIVLGFSVL G
Sbjct: 81  YWCGCADAACSGVEVAKLGYCEVGNGGSGPLSGQALLLVHIVWLIVLGFSVLFG 134

BLAST of Spo22396.1 vs. NCBI nr
Match: gi|720100133|ref|XP_010248153.1| (PREDICTED: uncharacterized protein LOC104591052 [Nelumbo nucifera])

HSP 1 Score: 152.9 bits (385), Expect = 4.200e-34
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 1

		  

Query: 10  FLFLSLLLITF---TQIAKCDTQPSVIRLPTDFAGDAK-LCSPEESSPKSCPVKCFRPDP 69
           FL   L+   F   + + + +   S IRLP+D A  A  LC+   SSP SCPV CFR DP
Sbjct: 12  FLISFLVFFIFGLCSSLVRSELDSSAIRLPSDDAVHADDLCAG--SSPPSCPVNCFRTDP 71

Query: 70  VCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVL 128
           VCGE+GVTYWCGCADA C+GTRVAKLG+CEVG+GGSGP+SGQA LLVH++WLIVLGFSVL
Sbjct: 72  VCGEDGVTYWCGCADAMCAGTRVAKLGFCEVGNGGSGPVSGQALLLVHIVWLIVLGFSVL 131

BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ75_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173140 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 8.100e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1

		  

Query: 1   MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC 60
           MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC
Sbjct: 1   MFPQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKC 60

Query: 61  FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL 120
           FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL
Sbjct: 61  FRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVL 120

Query: 121 GFSVLCG 128
           GFSVLCG
Sbjct: 121 GFSVLCG 127

BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CS61_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050650 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.000e-50
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = 1

		  

Query: 1   MFPQFSNFSFLFL-SLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVK 60
           MFP    FS L L SL LI+F Q AK +TQPSVI+LP+DFAG+  +CSPEE + KSCPVK
Sbjct: 1   MFPNNPKFSLLILLSLFLISFLQFAKSETQPSVIQLPSDFAGNHDICSPEEFTGKSCPVK 60

Query: 61  CFRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIV 120
           CFRPDPVCGENGVTYWCGCADA+C+GTRVAKLG+C+VG+GGSGPLSGQA LLVH++WLIV
Sbjct: 61  CFRPDPVCGENGVTYWCGCADAHCAGTRVAKLGFCQVGNGGSGPLSGQALLLVHMVWLIV 120

Query: 121 LGFSVLCG 128
           LGFS+LCG
Sbjct: 121 LGFSLLCG 128

BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Match: W9QLJ4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001582 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.700e-34
Identity = 73/117 (62.39%), Postives = 86/117 (73.50%), Query Frame = 1

		  

Query: 11  LFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGEN 70
           LF +LL ++     + D Q S IRLP+D    A  C      P SCPVKCFR DPVCG +
Sbjct: 22  LFTTLLFLSSFPAVRSDEQFSAIRLPSDADTGADPCGKSLERPPSCPVKCFRTDPVCGVD 81

Query: 71  GVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCG 128
           GVTYWCGCADA C+GT+V+KLG+CEVG+GGS PLS QA LLVH++WLIVLGFSVL G
Sbjct: 82  GVTYWCGCADARCAGTKVSKLGFCEVGNGGSAPLSAQALLLVHIVWLIVLGFSVLFG 138

BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Match: A0A059DDE6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00973 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.900e-34
Identity = 75/114 (65.79%), Postives = 85/114 (74.56%), Query Frame = 1

		  

Query: 16  LLITFTQIAKCDTQ--PSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGENGVT 75
           LL+ F   A+ + Q   S IRLPT+ + D        + P SCPVKCFR DPVCG +GVT
Sbjct: 21  LLLFFPSAARSEPQIPGSAIRLPTEKSSDGGGLCSGAARPGSCPVKCFRADPVCGVDGVT 80

Query: 76  YWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCG 128
           YWCGCADA CSG  VAKLGYCEVG+GGSGPLSGQA LLVH++WLIVLGFSVL G
Sbjct: 81  YWCGCADAACSGVEVAKLGYCEVGNGGSGPLSGQALLLVHIVWLIVLGFSVLFG 134

BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L616_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G184020 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.100e-32
Identity = 74/122 (60.66%), Postives = 88/122 (72.13%), Query Frame = 1

		  

Query: 9   SFLFLSLLLITFTQIAKCDTQPSVIRLPTDFA---GDAKLCSPEESSPKSCPVKCFRPDP 68
           S +FL LLLI F    + +   S IRLP++     GD  LC    S P SCPVKCFR DP
Sbjct: 10  SIIFLFLLLI-FVFPVRSEDVSSAIRLPSEATNNDGDVDLCPV--SVPSSCPVKCFRTDP 69

Query: 69  VCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVL 128
           VCG +GVTYWCGCADA CSG +VAK+G+CEVG+GGS P+ GQA LLVH++WLI+LG SVL
Sbjct: 70  VCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVL 128

BLAST of Spo22396.1 vs. TAIR (Arabidopsis)
Match: AT4G01575.1 (serine protease inhibitor, Kazal-type family protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.800e-28
Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 1

		  

Query: 3   PQFSNFSFLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAK----LCSPEESSPKSCPV 62
           P  +  +FLFL LL ++            +IRLP++     K     C    + P SCPV
Sbjct: 15  PSLAVIAFLFLILLNLSSVFADPSTEGGEIIRLPSEKINGEKNRGEFCEGI-AKPASCPV 74

Query: 63  KCFRPDPVCGENGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLI 122
           +CFRPDPVCGE+ VTYWCGCADA C G RV K G C+VG+G    + GQA LL+H++W++
Sbjct: 75  QCFRPDPVCGEDSVTYWCGCADALCHGVRVVKQGACDVGNGVGLSVPGQALLLIHIVWMM 134

Query: 123 VLGFSVLCG 128
           +LGFS+L G
Sbjct: 135 LLGFSILFG 142

BLAST of Spo22396.1 vs. TAIR (Arabidopsis)
Match: AT3G61980.1 (serine protease inhibitor, Kazal-type family protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.600e-23
Identity = 56/119 (47.06%), Postives = 67/119 (56.30%), Query Frame = 1

		  

Query: 10  FLFLSLLLITFTQIAKCDTQPSVIRLPTDFAGDAKLCSPEESSPKSCPVKCFRPDPVCGE 69
           FLFL L LI    +   D  P   R      GD     P       C + CFR DPVCG 
Sbjct: 10  FLFLVLCLIG---LQAADDFPDKSR------GDV---CPRVKDRGGCTINCFRADPVCGT 69

Query: 70  NGVTYWCGCADAYCSGTRVAKLGYCEVGSGGSGPLSGQAFLLVHLIWLIVLGFSVLCGG 129
           +GVTYWCGC DA C G RV K G C+ G+ GS  + GQA LL+H++WL +LG S+L GG
Sbjct: 70  DGVTYWCGCPDAACHGARVVKKGACDTGNAGSASVPGQALLLIHIVWLFLLGLSLLVGG 116

The following BLAST results are available for this feature:
BLAST of Spo22396.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902166979|gb|KNA07307.1|1.2e-68100.hypothetical protein SOVF_1731... [more]
gi|731321318|ref|XP_010671287.1|1.4e-5075.7PREDICTED: uncharacterized pro... [more]
gi|703063339|ref|XP_010086937.1|2.5e-3462.3hypothetical protein L484_0015... [more]
gi|702240589|ref|XP_010045336.1|4.2e-3465.7PREDICTED: uncharacterized pro... [more]
gi|720100133|ref|XP_010248153.1|4.2e-3463.9PREDICTED: uncharacterized pro... [more]
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BLAST of Spo22396.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QJ75_SPIOL8.1e-69100.Uncharacterized protein OS=Spi... [more]
A0A0J8CS61_BETVU1.0e-5075.7Uncharacterized protein OS=Bet... [more]
W9QLJ4_9ROSA1.7e-3462.3Uncharacterized protein OS=Mor... [more]
A0A059DDE6_EUCGR2.9e-3465.7Uncharacterized protein OS=Euc... [more]
A0A0A0L616_CUCSA6.1e-3260.6Uncharacterized protein OS=Cuc... [more]
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BLAST of Spo22396.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22396.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G01575.12.8e-2847.2serine protease inhibitor, Kaz... [more]
AT3G61980.11.6e-2347.0serine protease inhibitor, Kaz... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34376FAMILY NOT NAMEDcoord: 49..129
score: 2.5
NoneNo IPR availablePANTHERPTHR34376:SF2SERINE PROTEASE INHIBITOR, KAZAL-TYPE FAMILY PROTEINcoord: 49..129
score: 2.5