Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCGGAGCCTCCTTTGAAAATTTCAGCACATCACACAAGTGTTTTAGGCCGTGGCACGTCCCACTACCATCTTCACCCTCTTCCCCATACTCATAACCGCACACACTTGCAACTCCAAGTAAGCTAATTAGATAAAACGACTAGTTCGAACAATAAATGCTACCTTAAGATCTAGAAGATGCAGGCAGCAAAAGGTTGAAGCAAACAAAAACCATGAACTTTAAACATCAAAGAACCCAAAATCATGCAATTTCCACCCATCTTAAAACACACGTATACATACATACACCAGTATTTTGGTTAGGGTAGTTGGACCTCACAGTCTTAACACAACCTGGAAAGCATTGGTATTGGTACCCAAAAACTCACCATTAATTACTGCCAGCTCCATTATCATCAGCTCTCCATTAAAACTCTTTTCAGCAGCCTCCTACCTATAAACTCCATATCAAGTTAATGCAGCTTTTATTAACTTTTCCTTTGACCTTTCTTTCTCACTCTCTATAAAACACAATAAGGCAAACCATGTTACATTTCATACTCTTCTGACACTCAAAACAAAATAGATAGTGGACTTGGGAATTGGAATTCATGGGAAACAAAATAATTAATGTACCTGTTCAAGCTAATCATCTCCATAAACCAACATTTTTGCTGTTAATCTTCATCTTGGGTTTATTCCCTTGTTCGAATCTCGGTTTCGAATTGGAATTCTATGCATTGTCGTGTCCCGGTGTAGAATTTGTAGTTAGAGATGTTGTGAGATCAGCAAGTTCTTCTGACCCTAGTATTCCCGGGAAGCTTCTTCGTCTGCTCTTCCATGACTGCTTTGTCGATGTGAGTTTTCCGTGTCTTTGCATTGATTCTTTTTACTTCCTCCGTTTGTTTAACTTGCAGCACATTGGTACAGAAAGAGGTTGCTGATTCCTAAGACGAGACACTTATTAGATGTTAATTGAAACATTCTCTTTAATAAATGACTGTGTTGGAGATGCATGTTTTTTTACCTTTGCATTAATCAATGCCCAATTATTTCATGATTTATTTTGCATATACTTCGGATTCATTACAAAAAACAAGGCAGTTAGGGGTTTAAAGAAAGCTTAGAAGTATACAATTATGGTAATTATGGGTATAATATTATAGCTATATTTTTGCAGGGATGTGATGCATCAGTACTAGTAGAAGGAGATGGGACAGAGAGAGCAGATCCTGCAAATAAATCTCTGGGAGGGTTTGAAGTCATAGAGGCGGCCAAAAGAGAACTAGAACTATTCTGCCCACAAACTGTTTCATGTGCTGATATTCTTGCACTGGCTGCTAGAGATGCTGTTGTCATGGTATCATAAAATCTACCCTTCTTTTTCGTGTGCACGCATGTACACACACACACACCCACATACTTTTTCAATGTCATTTGAATTCCGTGATGTGAACTTTTTTTTTCTTTTTCTGATAATAGGCTGGAGGGCCGGATATTCAGATGCCGACTGGTAGGCGAGATGGACTGGTTTCTGCAATATCGAATGTCAGGCCTAATATCGTAGACACGAGCTTCACAGTGGATGATATGATTAGGATTTTTGGCGCTAAAGGGTTGACTTTAAATGATTTAGTCATTCTGTCAGGTATACACAACTGCAAAATGCTTTCCTAGAATGAAATTTCATTTCTAATAAAAGGCAAATAGCTATACAGAGATGGGAAGTCAAGAACAGTATGTTTATTTCCTCAAGAAGCAAGAAGGCTAAGTGGTCCTAATTTTATATTTGGCTCACAGTTAAGGCTCAGTGCTACCTGTAAACCAGGTTTGGCTCATGGGATAAACAAGCCTCATTTATGTCTTTATCTCTGTCTCTTCAAAAAAAGTAAAAATAAATACATTGACGATATGTGTGTCACGGGTAAAATATCAAACTCGAGGTCATTTAGCTCAATCCTGAATCTCATTGATCTAATCCTGATAATAGGTTTCGAATTCAAATTCAGAACAAGTCCACTTCAGTTGCATATGTAATAAATTAATAATTACAATTCAGAAGAAGTCCTCTGCGGCTCTGCATAATTTAACAATAAAGTTTAAGAGCTTTTGAGGAAGGTTTGTGAGTTTGGGGCAACCCTCTGGGTCTTAGACCACTGGTCTGGGTCTTTCCTGAGTCCGAATCATAAAGCTTTGAGCCTTGAGGGGATTTTTTGTGGAAGGTTGTAGGTTCGACGTTCAAGTTATTCCCTTGGGTCTTAGAGCACTTTTCTAAGCGATATCTAATAATAACAGTGAAGATAACAACAAGAAGCCCAGTTTTTATATTTCCCAGCAACAGATATACTTTCAAGTCTTTTAAGCATGCTTTAAAATTCTTATTGAAAGTCGATCTCCGATTAATGGAAATAGAAGTCACAGTATTGAATTAGATATAGAACATTTCCTAGAAAAACACTTCAACAATGTGTTTGGATGAAAAGATAAAAAACGAAGGGAAAGGAAAGAACAGTGATGGATCCATTTTATTTTGTTTGGATATAGATTTGGATAAGGGGGGGAGGGAAGGGAAATGCAGAGACCAAATTCTTCTGAAGTCGAAGATTTGGAAGAAAATGCAAGCATACTTCTCCCTTCCCAATTAGTCCTTTTGTTTTATGTATCGTTCCCTCCCCTCCCCTCCCCTTCCCTCCACCATTACTCTCGAAACACACTCAAAGGGGTAATTGTTGAATGATATAGCACGTATAACATTTTGATGTTGCAGGTGCACACACCATCGGATTAGCTCATTGCAACGCTTTCAGTGACCGGTTTCAGGTTAGTTCAAAAGGCAACCTCACTTTTGTTGACTCATCTCTAGACAAAGACTATGCGGGAAAGTTGGCTAAAAAGTGTGCAGCAAGCACATCAGCAACGGTAAACATCGATCCCAAGACAGCCTTCTCATTCGACAATCAATACTACAACAATCTCATAGCTAAAAAAGGACTCCTCCAAACTGACTCGATCCTATTTAATGATCAAAGGACAAAGAACTTGGTTTTGCAACTCGCTAGTGACTTGAACGGTTTCTATGAGGGGTGGAGTACTTCATTTTTGAAGCTCAGTAGTATAGGAGTTAAGGGTGATGGTGAAGGCGAGGTTCGACAAATTTGTTCAAGGATAAATGGGTGAAGGATAAAGTGTGGCTAGAATCTCATACTGTAGCTCCAATTCTGAGCAAAAGACTCTGTATGTATTGCATATAAAATTTGTTAAACACGATATTTGGGATGATTGTTTTCCTACAAAGTATTTTTCACTTCTTTCTTAGTAAATGATGGAATAGCCTAATTGGCAAATATCGACTTTGGGTTACAATGGAGTTTATAAAGTTCTCTCTGAACCATCATTTGCGACTAATTCTAATAAAAAAA TGCCGGAGCCTCCTTTGAAAATTTCAGCACATCACACAAGTGTTTTAGGCCGTGGCACGTCCCACTACCATCTTCACCCTCTTCCCCATACTCATAACCGCACACACTTGCAACTCCAAGTAAGCTAATTAGATAAAACGACTAGTTCGAACAATAAATGCTACCTTAAGATCTAGAAGATGCAGGCAGCAAAAGGTTGAAGCAAACAAAAACCATGAACTTTAAACATCAAAGAACCCAAAATCATGCAATTTCCACCCATCTTAAAACACACGTATACATACATACACCAGTATTTTGGTTAGGGTAGTTGGACCTCACAGTCTTAACACAACCTGGAAAGCATTGGTATTGGTACCCAAAAACTCACCATTAATTACTGCCAGCTCCATTATCATCAGCTCTCCATTAAAACTCTTTTCAGCAGCCTCCTACCTATAAACTCCATATCAAGTTAATGCAGCTTTTATTAACTTTTCCTTTGACCTTTCTTTCTCACTCTCTATAAAACACAATAAGGCAAACCATGTTACATTTCATACTCTTCTGACACTCAAAACAAAATAGATAGTGGACTTGGGAATTGGAATTCATGGGAAACAAAATAATTAATGTACCTGTTCAAGCTAATCATCTCCATAAACCAACATTTTTGCTGTTAATCTTCATCTTGGGTTTATTCCCTTGTTCGAATCTCGGTTTCGAATTGGAATTCTATGCATTGTCGTGTCCCGGTGTAGAATTTGTAGTTAGAGATGTTGTGAGATCAGCAAGTTCTTCTGACCCTAGTATTCCCGGGAAGCTTCTTCGTCTGCTCTTCCATGACTGCTTTGTCGATGGATGTGATGCATCAGTACTAGTAGAAGGAGATGGGACAGAGAGAGCAGATCCTGCAAATAAATCTCTGGGAGGGTTTGAAGTCATAGAGGCGGCCAAAAGAGAACTAGAACTATTCTGCCCACAAACTGTTTCATGTGCTGATATTCTTGCACTGGCTGCTAGAGATGCTGTTGTCATGGCTGGAGGGCCGGATATTCAGATGCCGACTGGTAGGCGAGATGGACTGGTTTCTGCAATATCGAATGTCAGGCCTAATATCGTAGACACGAGCTTCACAGTGGATGATATGATTAGGATTTTTGGCGCTAAAGGGTTGACTTTAAATGATTTAGTCATTCTGTCAGGTGCACACACCATCGGATTAGCTCATTGCAACGCTTTCAGTGACCGGTTTCAGGTTAGTTCAAAAGGCAACCTCACTTTTGTTGACTCATCTCTAGACAAAGACTATGCGGGAAAGTTGGCTAAAAAGTGTGCAGCAAGCACATCAGCAACGGTAAACATCGATCCCAAGACAGCCTTCTCATTCGACAATCAATACTACAACAATCTCATAGCTAAAAAAGGACTCCTCCAAACTGACTCGATCCTATTTAATGATCAAAGGACAAAGAACTTGGTTTTGCAACTCGCTAGTGACTTGAACGGTTTCTATGAGGGGTGGAGTACTTCATTTTTGAAGCTCAGTAGTATAGGAGTTAAGGGTGATGGTGAAGGCGAGGTTCGACAAATTTGTTCAAGGATAAATGGGTGAAGGATAAAGTGTGGCTAGAATCTCATACTGTAGCTCCAATTCTGAGCAAAAGACTCTGTATGTATTGCATATAAAATTTGTTAAACACGATATTTGGGATGATTGTTTTCCTACAAAGTATTTTTCACTTCTTTCTTAGTAAATGATGGAATAGCCTAATTGGCAAATATCGACTTTGGGTTACAATGGAGTTTATAAAGTTCTCTCTGAACCATCATTTGCGACTAATTCTAATAAAAAAA ATGGGAAACAAAATAATTAATGTACCTGTTCAAGCTAATCATCTCCATAAACCAACATTTTTGCTGTTAATCTTCATCTTGGGTTTATTCCCTTGTTCGAATCTCGGTTTCGAATTGGAATTCTATGCATTGTCGTGTCCCGGTGTAGAATTTGTAGTTAGAGATGTTGTGAGATCAGCAAGTTCTTCTGACCCTAGTATTCCCGGGAAGCTTCTTCGTCTGCTCTTCCATGACTGCTTTGTCGATGGATGTGATGCATCAGTACTAGTAGAAGGAGATGGGACAGAGAGAGCAGATCCTGCAAATAAATCTCTGGGAGGGTTTGAAGTCATAGAGGCGGCCAAAAGAGAACTAGAACTATTCTGCCCACAAACTGTTTCATGTGCTGATATTCTTGCACTGGCTGCTAGAGATGCTGTTGTCATGGCTGGAGGGCCGGATATTCAGATGCCGACTGGTAGGCGAGATGGACTGGTTTCTGCAATATCGAATGTCAGGCCTAATATCGTAGACACGAGCTTCACAGTGGATGATATGATTAGGATTTTTGGCGCTAAAGGGTTGACTTTAAATGATTTAGTCATTCTGTCAGGTGCACACACCATCGGATTAGCTCATTGCAACGCTTTCAGTGACCGGTTTCAGGTTAGTTCAAAAGGCAACCTCACTTTTGTTGACTCATCTCTAGACAAAGACTATGCGGGAAAGTTGGCTAAAAAGTGTGCAGCAAGCACATCAGCAACGGTAAACATCGATCCCAAGACAGCCTTCTCATTCGACAATCAATACTACAACAATCTCATAGCTAAAAAAGGACTCCTCCAAACTGACTCGATCCTATTTAATGATCAAAGGACAAAGAACTTGGTTTTGCAACTCGCTAGTGACTTGAACGGTTTCTATGAGGGGTGGAGTACTTCATTTTTGAAGCTCAGTAGTATAGGAGTTAAGGGTGATGGTGAAGGCGAGGTTCGACAAATTTGTTCAAGGATAAATGGGTGA MGNKIINVPVQANHLHKPTFLLLIFILGLFPCSNLGFELEFYALSCPGVEFVVRDVVRSASSSDPSIPGKLLRLLFHDCFVDGCDASVLVEGDGTERADPANKSLGGFEVIEAAKRELELFCPQTVSCADILALAARDAVVMAGGPDIQMPTGRRDGLVSAISNVRPNIVDTSFTVDDMIRIFGAKGLTLNDLVILSGAHTIGLAHCNAFSDRFQVSSKGNLTFVDSSLDKDYAGKLAKKCAASTSATVNIDPKTAFSFDNQYYNNLIAKKGLLQTDSILFNDQRTKNLVLQLASDLNGFYEGWSTSFLKLSSIGVKGDGEGEVRQICSRING Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo22120.1 vs. NCBI nr
Match: gi|902171325|gb|KNA07988.1| (hypothetical protein SOVF_166750 [Spinacia oleracea]) HSP 1 Score: 663.7 bits (1711), Expect = 1.700e-187 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1
BLAST of Spo22120.1 vs. NCBI nr
Match: gi|1781338|emb|CAA71496.1| (peroxidase [Spinacia oleracea]) HSP 1 Score: 607.8 bits (1566), Expect = 1.100e-170 Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 1
BLAST of Spo22120.1 vs. NCBI nr
Match: gi|731362576|ref|XP_010692957.1| (PREDICTED: peroxidase 46 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 531.2 bits (1367), Expect = 1.300e-147 Identity = 268/330 (81.21%), Postives = 293/330 (88.79%), Query Frame = 1
BLAST of Spo22120.1 vs. NCBI nr
Match: gi|698515400|ref|XP_009802575.1| (PREDICTED: peroxidase 46-like [Nicotiana sylvestris]) HSP 1 Score: 426.8 bits (1096), Expect = 3.500e-116 Identity = 206/319 (64.58%), Postives = 257/319 (80.56%), Query Frame = 1
BLAST of Spo22120.1 vs. NCBI nr
Match: gi|697137158|ref|XP_009622668.1| (PREDICTED: peroxidase 46 [Nicotiana tomentosiformis]) HSP 1 Score: 419.1 bits (1076), Expect = 7.300e-114 Identity = 208/327 (63.61%), Postives = 256/327 (78.29%), Query Frame = 1
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMR7_SPIOL (Peroxidase OS=Spinacia oleracea GN=SOVF_166750 PE=3 SV=1) HSP 1 Score: 663.7 bits (1711), Expect = 1.200e-187 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Match: P93553_SPIOL (Peroxidase (Fragment) OS=Spinacia oleracea GN=prxr9 PE=2 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 7.700e-171 Identity = 306/308 (99.35%), Postives = 306/308 (99.35%), Query Frame = 1
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEK6_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g044860 PE=3 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 9.200e-148 Identity = 268/330 (81.21%), Postives = 293/330 (88.79%), Query Frame = 1
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Match: W8PVT6_POPTR (Peroxidase OS=Populus trichocarpa GN=PRX42 PE=2 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.500e-113 Identity = 208/330 (63.03%), Postives = 262/330 (79.39%), Query Frame = 1
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Match: B9HB89_POPTR (Peroxidase OS=Populus trichocarpa GN=POPTR_0006s28320g PE=3 SV=2) HSP 1 Score: 416.4 bits (1069), Expect = 3.300e-113 Identity = 208/330 (63.03%), Postives = 261/330 (79.09%), Query Frame = 1
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 7.300e-106 Identity = 190/319 (59.56%), Postives = 235/319 (73.67%), Query Frame = 1
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.200e-102 Identity = 184/316 (58.23%), Postives = 230/316 (72.78%), Query Frame = 1
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 5.300e-64 Identity = 143/330 (43.33%), Postives = 197/330 (59.70%), Query Frame = 1
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 4.500e-63 Identity = 140/329 (42.55%), Postives = 198/329 (60.18%), Query Frame = 1
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.300e-62 Identity = 133/332 (40.06%), Postives = 196/332 (59.04%), Query Frame = 1
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Match: AT2G24800.1 (Peroxidase superfamily protein) HSP 1 Score: 385.2 bits (988), Expect = 4.100e-107 Identity = 190/319 (59.56%), Postives = 235/319 (73.67%), Query Frame = 1
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Match: AT4G31760.1 (Peroxidase superfamily protein) HSP 1 Score: 359.8 bits (922), Expect = 1.900e-99 Identity = 178/301 (59.14%), Postives = 220/301 (73.09%), Query Frame = 1
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Match: AT4G33420.1 (Peroxidase superfamily protein) HSP 1 Score: 243.0 bits (619), Expect = 2.500e-64 Identity = 140/329 (42.55%), Postives = 198/329 (60.18%), Query Frame = 1
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Match: AT5G14130.1 (Peroxidase superfamily protein) HSP 1 Score: 241.5 bits (615), Expect = 7.400e-64 Identity = 133/332 (40.06%), Postives = 196/332 (59.04%), Query Frame = 1
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Match: AT5G51890.1 (Peroxidase superfamily protein) HSP 1 Score: 234.2 bits (596), Expect = 1.200e-61 Identity = 122/311 (39.23%), Postives = 187/311 (60.13%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22120.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22120.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22120.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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