Spo21631.1 (mRNA) | SpinachBase

Overview


Name	Spo21631.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	PsbP domain-containing protein 4, chloroplastic
Location	chr2 : 55909645 .. 55915355 (-)
Sequence length	3502

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGTGTCAGGTCAGCAAGGATGGAACATAAGACAACTTAGATGTTGTTTACTCAACTTCCTATCCTCATGTACTGTCCACAACAATATGGTACACACACCCAATAAGAATTAGGAAATAAGAACATTTCCAATTTGTAGCAGAATTCTCCACTTAAACCTCAAACAGATTACAATATATCAGCAACACACAAAATTTGCAGATAAAATCAGAGCATAAGAAACAAATATCTGCATTACAACCAATCATCAACATTAACTTATACATAATTGATAATTCCCCTCAAGTTTCCTGTAACCTGTTCCTGTAATACTACTACCAGAGAAAAATGGCATCAACTATGTTCAGTAGCTCTTCTTGTATCGCCTCAAATACTTATCGGCGAAAACATGGTCTTAATTGTAACCTACAAATTCGGAACGACTTTGTTCTAGAAGAGACATCTTCCAATGACAGAGATGATCATGAGAAGCTTGTTTCTGGATTATTGAAGAGAAGATCACTAGTTCTGCAATCTGGGTTTGTTCCTCTGGTTACCTCTGTAACAGCTTTTGGATTTCCAGCACCGGGTTTGGCTGTAATTAAGCAAGGGCCTCTAGCAGGAAGAGTACCTGGATTATCTGAGCCGGATGAACAAGGTTAAATTGCTTTTGTGTGCTAATTTCTTGTAGTTTTTGCTTTTTTACTTAATTAGACAATATATTTTCTTCTGCTCATCATCTGACAATTACTCAGACAATTTTCTCATGGTAAAATATGAACAAAAGTACATGGCCAGAATATTCTCCAAGTGCATAGAAACTTATTTCAAAAAGAGAAATCAGTAGAAAGAGAGAAAGAAAGACCATAAACAAGAATATAATCTTATGATCAAGTTCATTTTCATATCCACATTAATTGAAGAGAAAGGTCTCAGGATAAGAAATGAACACAAGACCAGAAACTAGAAAAATCAGACCAGAAAAAAGCAAAAAGCACTCACCGAAAACATCCAGAACAGATCAGGCCAGACCAAAAAGTAGAAAAATCAGACCAGATCACCACGTAAAGAGAACAAAGCAATTACTTGATTAGTTCTTGCAAACAAAATTGTTTGGGGATACAGTTTAAGCATATTAGCAATTGAGATGTTGTTAGTTGTTACCTCATAATATCTGACCAGGCAAGTTCAGCTTCTAAATTTGCTTCAGAAACATAAAATGCATAATTCATTAGGCTGATAGAACATAGAACATAAAAAAATCTTTGGTGAATGTGATGGCTAAGCTTGTTGAAAGACTGAATCAAGGATCTCCATTCCTGGAAAAGTAATACCAAAAAAGAAGGAAAATTAGGGTTTAGATCTTTCACGAAGGATGTAACAGAACAAACAAAAAAAAAGACTTACAACCTGTCAAGCCAGTTCATCCCAGTTAGGTGTATCGAATAAGTAATAAACATCGTTATCATCCATAATGTGCGACCAATACAGCTCTTCAGCATGCTCAGTTTGTAATCCTCAAAAACTGAGATGTTCTGTGGTGCAGAGGAATAGTCTTTCAGTTTGCCACATCCACAAATTTGAAGTTGCTGGAGAGAGGTCTGCAATTGCACAACCAATTGATCAATTCTTTCCATTTTGTTATAGCTATTAGCTAATGACTCTAGGACAACTACATTGAGTGAAAGAAAATAGCATCCATGTACTTATCATGTAGGCACTTGAGAATATACTGGTCATGCACTACTTTTGGTGTGACTGCTTGACAGCATACGACTGTGGTTTAAATAGCAGCAATGAGTTTGTTATGAAGCTGAAAGTTGTTCATTGCTGCATATTTCGTGGGGAATATGTATGCAAATTTGTGAAAACAAACCAATGAACACTATGTACCCTGTAAATTTGTGAAAACAAACCAATGAACACTAAATACCCTGTAAAATTTGTGAAAACAAACCGATGAACACTAAATACCCTGTATTTGCACAAAGAGGTTGTTTAGATTACTAATGCAATTTGATTATGAAGGAAATTACAAAGCCAGATTTTCCTATCTCTTTTATGTAAGTCTCTACCTATGGGGTTTGCCCTGGCTACTGCAGGGATAGACACTCTTTGCAGCAAAGAAGACAACATGTAGTAGGTTTTGGTCTTGGATGGTTAACATTGTTGAAAAGTCGGTGTGCAAGTAAGTTACATGTTTCATGTGACCTGTAAACTCTAAGCATCACTACTATCATAAGTCTAACCTTGTTTACAGTAATATTACGGACCATAGAAAATGAGAACAAAGGTGGCATCCTAAAATAAATCCTTCTCAATTTAAGATGCATGGTCACAGTTCCAACTGAAAATCATGACAGAATTGGTTTCATATTTGTAATATCCAATAAAGCAATTATATTCCTAAAACTTCTGAATAATTATATTGCTAGTTGATAAGATGCTAATAAGCCATAGAACGCTCAGACAGGTTGGAGAACATACCAGAGGCCAGATGACAAGTCTGGAGGCCATGGGGTTGGGTGGAGTCCCATTATTCCTTACCTTTTCAAAGTCTCTGGAGACTGGGACGAGGTAAAGAAAATCAACCATTTTCATTAGGACTAAGCTTGCTTTGACTATTTAAATATTTAACACAAACTGTATTGTCAATAAAATAAAATAAAATAAAATATAAAGTTCAATACCCTTACAGAATAATTTCCCTGAAGTTGTTTTGTGATCACATATGCAGGTTCCTGTATCTATTGCAGACCTAGGCGGCACAGAAATTGATCTCAGATTTGCAAACCCCAAACAAGGCCGTTTATTTGTCATAGTTGCTCCTGTCCGTAGATTTTCAGATGGTGAGTATCCCTGCACATTGGCATTGTTATTGTAAGTATCAGCATAACTATAATAACAGGAAAACAACACTTCGGCTGAAATAAACACCCAACTGTATTGCATCCACATACTAGGATCAATTATTATTTACTTTTATGTGCACAGTACTTGGGGACAATACCACAATCCAAGAAATTGGAACACCTGAGAAGGTGATTAGTGCCTTTGGACCAGAAGTAACAGGAGAAAATGTAGAAGGGAAAGTTTTAAGCATGGAAGTAGCAGAGCATTCAGGAAGAAGATATTACCAGTATGAATTGGAGCCACCTCATGTTTTTATCACAGCTACTGCAGCTGGAAATCGGCTTTATCTATTCTGTGTTACTGGAAGTGGTAGGCAACCTCTGTTGGTGGACAATTCTTTCATACATTTCAGGAAGCCAAACTACATTTTTTTTCATATGATTCTATCATTGATGCAGGTCTTCAATGGAAGAGAAATTACCAGGATCTGAAACGAATAGCTCAATCTTTCCGTATTGTTTGAGTTGGCTAGTTCAAAGGAGTCCAACAAATGCCACAATGGAGGATCATTTCCTTCTTCATCATGCAGTTTAGTAGAGGACTAAACATATTGTAAAGTAGACATAAAAAGTTCAAGTCACAAATTTAGACCTTCTCGAGTGCAGAATGTTTATCAGGTCTGACTGCTAGCTTCATCAGACAAGGTGAACAATGATCAACTACTCATTTTGCAACAGTCTGTATTTATCTATAAAGAGCTTCAGTGGAAATATCATTTATAGACAGATCACAGATAACTGACTCACAGGTGAAAAGCTGCTTTTTCACTAAGGAACATGAATGACCTAGGGCTCTATTTGGTAAGGCTTAAAACATTTTCATGGAAAACAGTTTTCCTCTATTTTCAATTTTACATTGTTTGGTTTGCAAAGGAGTGTAAAACCATTTTCCCTAGGAGTAAAATTGTTCTCTCAATAATGGAAAACCATTTTCCCTTCAAAATGAAAGGAAAACTGCTTTCCTTCCTTTTCCTCATCTCTCTTGTACACTCCTCGCACTAACTGCTTACTTTCTCTTTCATTTCATCATCTTTCTTACATGGAAACCAAACAACGGATAACTAATTGTGGAATTGTGTTTACCGTTGTAAATTGTTTTCCATGAAAATCATTTTACACTAAAAATGTTTTACACCCAACCAAACGGAGCCCTAGATGCAGGAGTTTTAGCTTTTGTCAATCATGGCAGTTCTTATTTCCTCAGCCTTCTCCCATTGTTCTGAATCAGCATAGATGTTGGACATGAGAACATAATGTGAATTTCTAGAATCAATGTGGCTACTTTCTTCGAGTGCCTCCTCAGCCAAAGTGGCTTCTGAATGAACCCGACAAGCTCCAAGTAGTGTTCTCCAAATTGCATCATTTGGTCTCATAGGCATACTCTTGACCAAATCAAATGCCTCCTTTAACCTCCCTCCTCTTCCCAATAGGTCTATAACGCAACCATAGTGCTTAACTCCTGGTTTTAGTCCGTACTTTTCCATCTTCGAGAATATGTTTAAACCTTCTTGCAAAAGCCCACCATGAGCACAAGCTGAAAGAACAGAAAGAAAAGATATTACATCTGGCTTCACACCAGCATCCTCCATCTGATAAAAGAGTTCAACAGATTCCTGACATTTTCCATGAACAGCTAAACCAGTAATCATAGAATTCCAGCAACTGTGATTCCTTCGACTCATCCCCTCAAAAATCGACCTTGCAGTATTCAAATCACCACATTTTGCATACATGTCAACTAATCCGTTGAGAACAAAGTGGTTAAGCTCAATCCCCTTCTCAAAAATCAATGAATGAACCCCTTTACCAACCTCCAAACAACCCAACTGCGAACAAGCAGATAACACACTGGTTACCGTCACTTCATCAGGCTCAAACCCGTCCACCTGCATTTCTCTATATGCTACAATCGCTTCTTCACAAAACCCATTTCGAGCCAACCCAGACACTAATGAATTCCAAATCACCAAGTTCCTTACGGGAGTTCGATTAAATATACCCTTGGCTTCCTCAACTTCACCCATCTTGCAATACCCCGAAATCATCACTGACCAAACAAAACAGTTTCTTTTCGGCATAACCTCCAATACTTCCCTTGCATCCCCCATTAACCCATTCCTAGCATACCCATCAACCATCACAGTCCAAGTTACAACAGTCTTCATCTTCACTGGAACCTCATCAAACAACTCCCTAGCCATAGCCATATTCCCAATCTTCGCAAACCCACGAATCATTTCATTCCATGTAACCACTGTCCTCTCCGGCATAGCCTTAAACAACGACAATGCAGATGCAGAATCTCCAGAAAACAAGTACCCAGCTACCATTGCATTCCATGTGGTCACATTTCTCTGAGGCATATAATCAAACACCTTGCGTGCATATATAATGTCCCTGCATTTTGCGTACATACCCAACAACGAGGTTCCGATTGTAACATCAATATCAACCCCGTGTTTCAATGATTCAGCGTGAAGAGATTTCCCATGATTTAACAATGAAAGATTAGAACAAGCTTTAAGGATTAAAGGGATTACTCCTGAATTGCATTCTTTTTGGCGGCGAAACTGGGGATAGAGAAGAAGGGCTTTTCTTGGTGATTTTTGTGCAAGAAGGTCTCTTATGGTGTGAATCAAATTTGTGGTGTTTGACATAACATGCATAATTGTGTTAGTTTTAGAGTTTTAGTTCATAATGTTGTTGTTTTAGTGCAATCACTTAATACGGAGTACTAGTAGCTAAGTGTTTGTGTAGAGTGTAGACTCGTTGTTGGCGCGAGTACTTCGTAATTTGCCATTTTAATTTGTAATTCCCCAG

mRNA sequence

ACGTGTCAGGTCAGCAAGGATGGAACATAAGACAACTTAGATGTTGTTTACTCAACTTCCTATCCTCATGTACTGTCCACAACAATATGGTACACACACCCAATAAGAATTAGGAAATAAGAACATTTCCAATTTGTAGCAGAATTCTCCACTTAAACCTCAAACAGATTACAATATATCAGCAACACACAAAATTTGCAGATAAAATCAGAGCATAAGAAACAAATATCTGCATTACAACCAATCATCAACATTAACTTATACATAATTGATAATTCCCCTCAAGTTTCCTGTAACCTGTTCCTGTAATACTACTACCAGAGAAAAATGGCATCAACTATGTTCAGTAGCTCTTCTTGTATCGCCTCAAATACTTATCGGCGAAAACATGGTCTTAATTGTAACCTACAAATTCGGAACGACTTTGTTCTAGAAGAGACATCTTCCAATGACAGAGATGATCATGAGAAGCTTGTTTCTGGATTATTGAAGAGAAGATCACTAGTTCTGCAATCTGGGTTTGTTCCTCTGGTTACCTCTGTAACAGCTTTTGGATTTCCAGCACCGGGTTTGGCTGTAATTAAGCAAGGGCCTCTAGCAGGAAGAGTACCTGGATTATCTGAGCCGGATGAACAAGGTTGGAGAACATACCAGAGGCCAGATGACAAGTCTGGAGGCCATGGGGTTGGGTGGAGTCCCATTATTCCTTACCTTTTCAAAGTCTCTGGAGACTGGGACGAGGTTCCTGTATCTATTGCAGACCTAGGCGGCACAGAAATTGATCTCAGATTTGCAAACCCCAAACAAGGCCGTTTATTTGTCATAGTTGCTCCTGTCCGTAGATTTTCAGATGTACTTGGGGACAATACCACAATCCAAGAAATTGGAACACCTGAGAAGGTGATTAGTGCCTTTGGACCAGAAGTAACAGGAGAAAATGTAGAAGGGAAAGTTTTAAGCATGGAAGTAGCAGAGCATTCAGGAAGAAGATATTACCAGTATGAATTGGAGCCACCTCATGTTTTTATCACAGCTACTGCAGCTGGAAATCGGCTTTATCTATTCTGTGTTACTGGAAGTGGTCTTCAATGGAAGAGAAATTACCAGGATCTGAAACGAATAGCTCAATCTTTCCGTATTGTTTGAGTTGGCTAGTTCAAAGGAGTCCAACAAATGCCACAATGGAGGATCATTTCCTTCTTCATCATGCAGTTTAGTAGAGGACTAAACATATTGTAAAGTAGACATAAAAAGTTCAAGTCACAAATTTAGACCTTCTCGAGTGCAGAATGTTTATCAGGTCTGACTGCTAGCTTCATCAGACAAGGTGAACAATGATCAACTACTCATTTTGCAACAGTCTGTATTTATCTATAAAGAGCTTCAGTGGAAATATCATTTATAGACAGATCACAGATAACTGACTCACAGGTGAAAAGCTGCTTTTTCACTAAGGAACATGAATGACCTAGGGCTCTATTTGGTAAGGCTTAAAACATTTTCATGGAAAACAGTTTTCCTCTATTTTCAATTTTACATTGTTTGGTTTGCAAAGGAGTGTAAAACCATTTTCCCTAGGAGTAAAATTGTTCTCTCAATAATGGAAAACCATTTTCCCTTCAAAATGAAAGGAAAACTGCTTTCCTTCCTTTTCCTCATCTCTCTTGTACACTCCTCGCACTAACTGCTTACTTTCTCTTTCATTTCATCATCTTTCTTACATGGAAACCAAACAACGGATAACTAATTGTGGAATTGTGTTTACCGTTGTAAATTGTTTTCCATGAAAATCATTTTACACTAAAAATGTTTTACACCCAACCAAACGGAGCCCTAGATGCAGGAGTTTTAGCTTTTGTCAATCATGGCAGTTCTTATTTCCTCAGCCTTCTCCCATTGTTCTGAATCAGCATAGATGTTGGACATGAGAACATAATGTGAATTTCTAGAATCAATGTGGCTACTTTCTTCGAGTGCCTCCTCAGCCAAAGTGGCTTCTGAATGAACCCGACAAGCTCCAAGTAGTGTTCTCCAAATTGCATCATTTGGTCTCATAGGCATACTCTTGACCAAATCAAATGCCTCCTTTAACCTCCCTCCTCTTCCCAATAGGTCTATAACGCAACCATAGTGCTTAACTCCTGGTTTTAGTCCGTACTTTTCCATCTTCGAGAATATGTTTAAACCTTCTTGCAAAAGCCCACCATGAGCACAAGCTGAAAGAACAGAAAGAAAAGATATTACATCTGGCTTCACACCAGCATCCTCCATCTGATAAAAGAGTTCAACAGATTCCTGACATTTTCCATGAACAGCTAAACCAGTAATCATAGAATTCCAGCAACTGTGATTCCTTCGACTCATCCCCTCAAAAATCGACCTTGCAGTATTCAAATCACCACATTTTGCATACATGTCAACTAATCCGTTGAGAACAAAGTGGTTAAGCTCAATCCCCTTCTCAAAAATCAATGAATGAACCCCTTTACCAACCTCCAAACAACCCAACTGCGAACAAGCAGATAACACACTGGTTACCGTCACTTCATCAGGCTCAAACCCGTCCACCTGCATTTCTCTATATGCTACAATCGCTTCTTCACAAAACCCATTTCGAGCCAACCCAGACACTAATGAATTCCAAATCACCAAGTTCCTTACGGGAGTTCGATTAAATATACCCTTGGCTTCCTCAACTTCACCCATCTTGCAATACCCCGAAATCATCACTGACCAAACAAAACAGTTTCTTTTCGGCATAACCTCCAATACTTCCCTTGCATCCCCCATTAACCCATTCCTAGCATACCCATCAACCATCACAGTCCAAGTTACAACAGTCTTCATCTTCACTGGAACCTCATCAAACAACTCCCTAGCCATAGCCATATTCCCAATCTTCGCAAACCCACGAATCATTTCATTCCATGTAACCACTGTCCTCTCCGGCATAGCCTTAAACAACGACAATGCAGATGCAGAATCTCCAGAAAACAAGTACCCAGCTACCATTGCATTCCATGTGGTCACATTTCTCTGAGGCATATAATCAAACACCTTGCGTGCATATATAATGTCCCTGCATTTTGCGTACATACCCAACAACGAGGTTCCGATTGTAACATCAATATCAACCCCGTGTTTCAATGATTCAGCGTGAAGAGATTTCCCATGATTTAACAATGAAAGATTAGAACAAGCTTTAAGGATTAAAGGGATTACTCCTGAATTGCATTCTTTTTGGCGGCGAAACTGGGGATAGAGAAGAAGGGCTTTTCTTGGTGATTTTTGTGCAAGAAGGTCTCTTATGGTGTGAATCAAATTTGTGGTGTTTGACATAACATGCATAATTGTGTTAGTTTTAGAGTTTTAGTTCATAATGTTGTTGTTTTAGTGCAATCACTTAATACGGAGTACTAGTAGCTAAGTGTTTGTGTAGAGTGTAGACTCGTTGTTGGCGCGAGTACTTCGTAATTTGCCATTTTAATTTGTAATTCCCCAG

Coding sequence (CDS)

ATGGCATCAACTATGTTCAGTAGCTCTTCTTGTATCGCCTCAAATACTTATCGGCGAAAACATGGTCTTAATTGTAACCTACAAATTCGGAACGACTTTGTTCTAGAAGAGACATCTTCCAATGACAGAGATGATCATGAGAAGCTTGTTTCTGGATTATTGAAGAGAAGATCACTAGTTCTGCAATCTGGGTTTGTTCCTCTGGTTACCTCTGTAACAGCTTTTGGATTTCCAGCACCGGGTTTGGCTGTAATTAAGCAAGGGCCTCTAGCAGGAAGAGTACCTGGATTATCTGAGCCGGATGAACAAGGTTGGAGAACATACCAGAGGCCAGATGACAAGTCTGGAGGCCATGGGGTTGGGTGGAGTCCCATTATTCCTTACCTTTTCAAAGTCTCTGGAGACTGGGACGAGGTTCCTGTATCTATTGCAGACCTAGGCGGCACAGAAATTGATCTCAGATTTGCAAACCCCAAACAAGGCCGTTTATTTGTCATAGTTGCTCCTGTCCGTAGATTTTCAGATGTACTTGGGGACAATACCACAATCCAAGAAATTGGAACACCTGAGAAGGTGATTAGTGCCTTTGGACCAGAAGTAACAGGAGAAAATGTAGAAGGGAAAGTTTTAAGCATGGAAGTAGCAGAGCATTCAGGAAGAAGATATTACCAGTATGAATTGGAGCCACCTCATGTTTTTATCACAGCTACTGCAGCTGGAAATCGGCTTTATCTATTCTGTGTTACTGGAAGTGGTCTTCAATGGAAGAGAAATTACCAGGATCTGAAACGAATAGCTCAATCTTTCCGTATTGTTTGA

Protein sequence

MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21631	Spo21631	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21631.1	Spo21631.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21631.1.utr5p.1	Spo21631.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21631.1.CDS.5	Spo21631.1.CDS.5	CDS
Spo21631.1.CDS.4	Spo21631.1.CDS.4	CDS
Spo21631.1.CDS.3	Spo21631.1.CDS.3	CDS
Spo21631.1.CDS.2	Spo21631.1.CDS.2	CDS
Spo21631.1.CDS.1	Spo21631.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21631.1.utr3p.1	Spo21631.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21631.1.exon.5	Spo21631.1.exon.5	exon
Spo21631.1.exon.4	Spo21631.1.exon.4	exon
Spo21631.1.exon.3	Spo21631.1.exon.3	exon
Spo21631.1.exon.2	Spo21631.1.exon.2	exon
Spo21631.1.exon.1	Spo21631.1.exon.1	exon

Homology

[Close]

BLAST of Spo21631.1 vs. NCBI nr
Match: gi|902192979|gb|KNA12169.1| (hypothetical protein SOVF_128350 [Spinacia oleracea])

HSP 1 Score: 555.4 bits (1430), Expect = 5.300e-155
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1


		  
Query: 1   MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV 60
           MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV
Sbjct: 1   MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV 60

Query: 61  LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV 120
           LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV
Sbjct: 61  LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV 120

Query: 121 GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN 180
           GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN
Sbjct: 121 GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN 180

Query: 181 TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG 240
           TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG
Sbjct: 181 TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG 240

Query: 241 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV
Sbjct: 241 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 272

[Close]

BLAST of Spo21631.1 vs. NCBI nr
Match: gi|731313352|ref|XP_010679853.1| (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 437.6 bits (1124), Expect = 1.600e-119
Identity = 222/279 (79.57%), Postives = 243/279 (87.10%), Query Frame = 1


		  
Query: 1   MASTMFSSSS-CIASNTYRRKHGLNCNLQIRNDFVLE------ETSSNDRDDHEKLVSGL 60
           MASTM SSSS C A   Y +KH LN  +Q  N+F+        ETS  D D   KL S L
Sbjct: 1   MASTMCSSSSSCFAWKNYSQKHSLNHRIQ--NEFIHSSSLNPPETSVVD-DGAAKLSSSL 60

Query: 61  LKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDD 120
           LKRRS+VLQSG VPLV+S+TA GFP  GLAV+KQGPLAGRVPGLSEPDEQGWRTY+RPDD
Sbjct: 61  LKRRSVVLQSGLVPLVSSLTALGFPEQGLAVVKQGPLAGRVPGLSEPDEQGWRTYRRPDD 120

Query: 121 KSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRF 180
           KSGGHGVGWSPIIPYLFKV GDWDEVPVSIADLGGTEIDLRFA+PKQGRLFV+VAPVRRF
Sbjct: 121 KSGGHGVGWSPIIPYLFKVYGDWDEVPVSIADLGGTEIDLRFASPKQGRLFVVVAPVRRF 180

Query: 181 SDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVF 240
           +D LGDNTTI+EIGTPEKVI+AFGPEV GENVEGKVLSMEVAEHSGR+YYQ+ELEPPHV 
Sbjct: 181 ADELGDNTTIEEIGTPEKVINAFGPEVIGENVEGKVLSMEVAEHSGRKYYQFELEPPHVL 240

Query: 241 ITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           ITATAAGNRLYLFCVTGSGLQWKR+Y+DLK+I++SFRIV
Sbjct: 241 ITATAAGNRLYLFCVTGSGLQWKRHYKDLKQISESFRIV 276

[Close]

BLAST of Spo21631.1 vs. NCBI nr
Match: gi|731313350|ref|XP_010679845.1| (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 421.8 bits (1083), Expect = 9.200e-115
Identity = 222/309 (71.84%), Postives = 243/309 (78.64%), Query Frame = 1


		  
Query: 1   MASTMFSSSS-CIASNTYRRKHGLNCNLQIRNDFVLE------ETSSNDRDDHEKLVSGL 60
           MASTM SSSS C A   Y +KH LN  +Q  N+F+        ETS  D D   KL S L
Sbjct: 1   MASTMCSSSSSCFAWKNYSQKHSLNHRIQ--NEFIHSSSLNPPETSVVD-DGAAKLSSSL 60

Query: 61  LKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDD 120
           LKRRS+VLQSG VPLV+S+TA GFP  GLAV+KQGPLAGRVPGLSEPDEQGWRTY+RPDD
Sbjct: 61  LKRRSVVLQSGLVPLVSSLTALGFPEQGLAVVKQGPLAGRVPGLSEPDEQGWRTYRRPDD 120

Query: 121 KSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRF 180
           KSGGHGVGWSPIIPYLFKV GDWDEVPVSIADLGGTEIDLRFA+PKQGRLFV+VAPVRRF
Sbjct: 121 KSGGHGVGWSPIIPYLFKVYGDWDEVPVSIADLGGTEIDLRFASPKQGRLFVVVAPVRRF 180

Query: 181 SDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVF 240
           +D LGDNTTI+EIGTPEKVI+AFGPEV GENVEGKVLSMEVAEHSGR+YYQ+ELEPPHV 
Sbjct: 181 ADELGDNTTIEEIGTPEKVINAFGPEVIGENVEGKVLSMEVAEHSGRKYYQFELEPPHVL 240

Query: 241 ITATAAGNRLYLFCVTGS------------------------------GLQWKRNYQDLK 273
           ITATAAGNRLYLFCVTGS                              GLQWKR+Y+DLK
Sbjct: 241 ITATAAGNRLYLFCVTGSGRQLKLVHNSFFVSRNINTIYFSYASIILTGLQWKRHYKDLK 300

[Close]

BLAST of Spo21631.1 vs. NCBI nr
Match: gi|848909187|ref|XP_012853413.1| (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Erythranthe guttata])

HSP 1 Score: 362.8 bits (930), Expect = 5.100e-97
Identity = 174/216 (80.56%), Postives = 192/216 (88.89%), Query Frame = 1


		  
Query: 57  RSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSG 116
           R  V+ SG V L++S   FGFP  GLAVIKQG LAGR+PGLSEPDEQGWRTYQRPDDKSG
Sbjct: 52  RRAVIASG-VALLSSAAGFGFPGNGLAVIKQGLLAGRIPGLSEPDEQGWRTYQRPDDKSG 111

Query: 117 GHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDV 176
           GHGVGWSPIIPY F V  +W+EVPVSIADLGGTEIDLRFANPKQGR+ VIVAPV RFSD 
Sbjct: 112 GHGVGWSPIIPYAFSVPQNWEEVPVSIADLGGTEIDLRFANPKQGRVSVIVAPVLRFSDN 171

Query: 177 LGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITA 236
           LGDNTTI++IGTPEKVISAFGPEV G+NVEGKVLS  VAEHSGR+YYQ+ELEPPHV ITA
Sbjct: 172 LGDNTTIEQIGTPEKVISAFGPEVIGQNVEGKVLSSNVAEHSGRKYYQFELEPPHVLITA 231

Query: 237 TAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           TAAGNRLYLF VTG+GLQWK++Y+DLKRI+ SFR+V
Sbjct: 232 TAAGNRLYLFSVTGNGLQWKKHYKDLKRISDSFRVV 266

[Close]

BLAST of Spo21631.1 vs. NCBI nr
Match: gi|747056994|ref|XP_011074779.1| (PREDICTED: psbP domain-containing protein 4, chloroplastic [Sesamum indicum])

HSP 1 Score: 359.0 bits (920), Expect = 7.300e-96
Identity = 173/222 (77.93%), Postives = 198/222 (89.19%), Query Frame = 1


		  
Query: 51  SGLLKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQR 110
           SGL+ RR+  + SG V LV+S    GFP  GLA++KQG LAGR+PGLSEPDEQGWRTY+R
Sbjct: 58  SGLMSRRA-AMASG-VALVSSAVV-GFPGDGLALVKQGLLAGRIPGLSEPDEQGWRTYRR 117

Query: 111 PDDKSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPV 170
           PD+KSGGHGVGWSPIIPYLF V  DW+EVPVSIADLGGTEIDLRFA+PK+GR+FVIVAPV
Sbjct: 118 PDEKSGGHGVGWSPIIPYLFSVPQDWEEVPVSIADLGGTEIDLRFASPKEGRIFVIVAPV 177

Query: 171 RRFSDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPP 230
            RF+D LGDN TI++IGTPEKVI+AFGPEV GENVEGKVLS EVAEHSGR+YYQ+ELEPP
Sbjct: 178 LRFADNLGDNATIEQIGTPEKVINAFGPEVIGENVEGKVLSAEVAEHSGRKYYQFELEPP 237

Query: 231 HVFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           HV ITATAAGNRLYLF VTG+GLQWK++Y+DLKRIA SFR++
Sbjct: 238 HVLITATAAGNRLYLFSVTGNGLQWKKHYKDLKRIAGSFRVI 276

[Close]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128350 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 3.700e-155
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1


		  
Query: 1   MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV 60
           MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV
Sbjct: 1   MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV 60

Query: 61  LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV 120
           LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV
Sbjct: 61  LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV 120

Query: 121 GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN 180
           GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN
Sbjct: 121 GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN 180

Query: 181 TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG 240
           TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG
Sbjct: 181 TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG 240

Query: 241 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV
Sbjct: 241 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 272

[Close]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0X6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g010720 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.100e-119
Identity = 222/279 (79.57%), Postives = 243/279 (87.10%), Query Frame = 1


		  
Query: 1   MASTMFSSSS-CIASNTYRRKHGLNCNLQIRNDFVLE------ETSSNDRDDHEKLVSGL 60
           MASTM SSSS C A   Y +KH LN  +Q  N+F+        ETS  D D   KL S L
Sbjct: 1   MASTMCSSSSSCFAWKNYSQKHSLNHRIQ--NEFIHSSSLNPPETSVVD-DGAAKLSSSL 60

Query: 61  LKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDD 120
           LKRRS+VLQSG VPLV+S+TA GFP  GLAV+KQGPLAGRVPGLSEPDEQGWRTY+RPDD
Sbjct: 61  LKRRSVVLQSGLVPLVSSLTALGFPEQGLAVVKQGPLAGRVPGLSEPDEQGWRTYRRPDD 120

Query: 121 KSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRF 180
           KSGGHGVGWSPIIPYLFKV GDWDEVPVSIADLGGTEIDLRFA+PKQGRLFV+VAPVRRF
Sbjct: 121 KSGGHGVGWSPIIPYLFKVYGDWDEVPVSIADLGGTEIDLRFASPKQGRLFVVVAPVRRF 180

Query: 181 SDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVF 240
           +D LGDNTTI+EIGTPEKVI+AFGPEV GENVEGKVLSMEVAEHSGR+YYQ+ELEPPHV 
Sbjct: 181 ADELGDNTTIEEIGTPEKVINAFGPEVIGENVEGKVLSMEVAEHSGRKYYQFELEPPHVL 240

Query: 241 ITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           ITATAAGNRLYLFCVTGSGLQWKR+Y+DLK+I++SFRIV
Sbjct: 241 ITATAAGNRLYLFCVTGSGLQWKRHYKDLKQISESFRIV 276

[Close]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Match: A0A022Q594_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011942mg PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.500e-97
Identity = 174/216 (80.56%), Postives = 192/216 (88.89%), Query Frame = 1


		  
Query: 57  RSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSG 116
           R  V+ SG V L++S   FGFP  GLAVIKQG LAGR+PGLSEPDEQGWRTYQRPDDKSG
Sbjct: 52  RRAVIASG-VALLSSAAGFGFPGNGLAVIKQGLLAGRIPGLSEPDEQGWRTYQRPDDKSG 111

Query: 117 GHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDV 176
           GHGVGWSPIIPY F V  +W+EVPVSIADLGGTEIDLRFANPKQGR+ VIVAPV RFSD 
Sbjct: 112 GHGVGWSPIIPYAFSVPQNWEEVPVSIADLGGTEIDLRFANPKQGRVSVIVAPVLRFSDN 171

Query: 177 LGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITA 236
           LGDNTTI++IGTPEKVISAFGPEV G+NVEGKVLS  VAEHSGR+YYQ+ELEPPHV ITA
Sbjct: 172 LGDNTTIEQIGTPEKVISAFGPEVIGQNVEGKVLSSNVAEHSGRKYYQFELEPPHVLITA 231

Query: 237 TAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           TAAGNRLYLF VTG+GLQWK++Y+DLKRI+ SFR+V
Sbjct: 232 TAAGNRLYLFSVTGNGLQWKKHYKDLKRISDSFRVV 266

[Close]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Match: V4T374_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002228mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.500e-95
Identity = 189/272 (69.49%), Postives = 217/272 (79.78%), Query Frame = 1


		  
Query: 1   MASTMFSSSSCIASNTYRRKHGLNCNLQIRNDFVLEETSSNDRDDHEKLVSGLLKRRSLV 60
           M +T+FSS S +A  +   ++G++     R   V   T S+        V G++KRRS V
Sbjct: 1   MGTTLFSSCSFLAQIS-SVENGIS-----RVKAVACSTGSDS-------VDGVMKRRS-V 60

Query: 61  LQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRPDDKSGGHGV 120
           L SG   L++S    GFPA GLAV+KQG LAGRVPGLSEPDEQGWRTY+RPDDKSGGHGV
Sbjct: 61  LVSG-ASLISSAV-LGFPADGLAVVKQGLLAGRVPGLSEPDEQGWRTYRRPDDKSGGHGV 120

Query: 121 GWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVRRFSDVLGDN 180
           GWSPIIPYLF V  +WDEVPVSIADLGGTEIDLRFA+PK+GRLFVIVAPV RF+D LGD+
Sbjct: 121 GWSPIIPYLFSVPQEWDEVPVSIADLGGTEIDLRFASPKKGRLFVIVAPVLRFADNLGDD 180

Query: 181 TTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPHVFITATAAG 240
            TI++IG PEKVI+AFGPEV GENVEGKVLSM V EHSGR YY+YELEPPHV ITATAAG
Sbjct: 181 ATIEKIGPPEKVINAFGPEVIGENVEGKVLSMNVEEHSGRTYYRYELEPPHVLITATAAG 240

Query: 241 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           NRLYLF VTG+GLQWKR+Y DLK+IA SFR+V
Sbjct: 241 NRLYLFSVTGNGLQWKRHYTDLKKIADSFRVV 256

[Close]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Match: B9SJK7_RICCO (Thylakoid lumenal 29.8 kDa protein, chloroplast, putative OS=Ricinus communis GN=RCOM_0138880 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.500e-95
Identity = 174/221 (78.73%), Postives = 192/221 (86.88%), Query Frame = 1


		  
Query: 52  GLLKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGPLAGRVPGLSEPDEQGWRTYQRP 111
           GLLKRRS  L SG    + S T  GFP  GLA +KQG LAGR+PGLSEPDEQGWRTY+RP
Sbjct: 53  GLLKRRS-ALVSGIS--LASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQGWRTYRRP 112

Query: 112 DDKSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGTEIDLRFANPKQGRLFVIVAPVR 171
           DDKSGGHGVGWSPIIPY FKV  +W+EVPVSIADLGGTEIDLRF++ K+GRLFVIVAPV 
Sbjct: 113 DDKSGGHGVGWSPIIPYAFKVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVL 172

Query: 172 RFSDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELEPPH 231
           RF+D LGDN TI+ IG PEKVI+AFGPEV GENVEGKVLSM VAEHSGR YYQ+ELEPPH
Sbjct: 173 RFADDLGDNATIERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHSGRMYYQFELEPPH 232

Query: 232 VFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           V ITATAAGNRLYLF VTG+GLQWKR+Y+DLKRIA+SFR+V
Sbjct: 233 VLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIAESFRVV 270

[Close]

BLAST of Spo21631.1 vs. ExPASy Swiss-Prot
Match: PPD4_ARATH (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=PPD4 PE=1 SV=2)

HSP 1 Score: 344.7 bits (883), Expect = 9.000e-94
Identity = 174/243 (71.60%), Postives = 199/243 (81.89%), Query Frame = 1


		  
Query: 30  RNDFVLEETSSNDRDDHEKLVSGLLKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGP 89
           R++  + +TS    +D  +  + +L RRS V+ SG   LV+S TA  FP  GLAV+KQG 
Sbjct: 24  RSNSEIPKTSPGGCED--EWCARVLSRRS-VMASG---LVSSTTALAFPREGLAVVKQGL 83

Query: 90  LAGRVPGLSEPDEQGWRTYQRPDDKSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGT 149
           LAGRVPGLSEPDE+GWRTY+RPD+KSGGHGVGWSPIIPY F V  DW+EVPVSIADLGGT
Sbjct: 84  LAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGT 143

Query: 150 EIDLRFANPKQGRLFVIVAPVRRFSDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKV 209
           EIDLRFA+PK+GRL VIVAPV RF+D LGD+  I+ IG P KVI+AFGPEV GENVEGKV
Sbjct: 144 EIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKV 203

Query: 210 LSMEVAEHSGRRYYQYELEPPHVFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSF 269
           LS  VAEH GR YYQ+ELEPPHV ITATAAGNRLYLF VTG+GLQWKR+Y+DLKRIA SF
Sbjct: 204 LSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSF 260

Query: 270 RIV 273
           RIV
Sbjct: 264 RIV 260

[Close]

BLAST of Spo21631.1 vs. ExPASy Swiss-Prot
Match: PPD6_ARATH (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana GN=PPD6 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.400e-16
Identity = 49/160 (30.63%), Postives = 88/160 (55.00%), Query Frame = 1


		  
Query: 127 PYLFKVSGDWDEVPVSIADLGG--------TEIDLRFANPKQGRLFVIVAPVRRFSDVLG 186
           PY F +  +W ++ ++    G           I+++F N KQG++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNK-- 164

Query: 187 DNTTIQEIGTPEKVISAFGPEVTGENVEG-KVLSMEVAEHSGRRYYQYELEPP------H 246
            N TI+++G PEKVI++ GP VTG + +  ++L   + +   + YY+Y LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 247 VFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRI 272
               ATA G+ + LF V+ +  QW+ + + L+ I  SF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of Spo21631.1 vs. ExPASy Swiss-Prot
Match: TL19_ARATH (Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At3g63540 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.800e-9
Identity = 42/152 (27.63%), Postives = 68/152 (44.74%), Query Frame = 1


		  
Query: 128 YLFKVSGDWDEVPVSIADLGGTEIDLRFANPK---QGRLFVIVAPVRRFS--DVLGDNTT 187
           Y++ V   W E  VS  + G    D  F NPK   +      +A  R+ +  DV+ +N  
Sbjct: 86  YVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLA 145

Query: 188 IQEIGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELE--PPHVFITATAAG 247
           + ++   + +  A            KV+S E  + +G+ YY YE++    H  IT T + 
Sbjct: 146 LSDVELQDLIAGA-----------DKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSK 205

Query: 248 NRLYLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           NRLY   V     +W R++  L  +  SF+ V
Sbjct: 206 NRLYAHFVNAPAPEWNRDHDTLTHLRDSFKTV 226

[Close]

BLAST of Spo21631.1 vs. TAIR (Arabidopsis)
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 344.7 bits (883), Expect = 5.000e-95
Identity = 174/243 (71.60%), Postives = 199/243 (81.89%), Query Frame = 1


		  
Query: 30  RNDFVLEETSSNDRDDHEKLVSGLLKRRSLVLQSGFVPLVTSVTAFGFPAPGLAVIKQGP 89
           R++  + +TS    +D  +  + +L RRS V+ SG   LV+S TA  FP  GLAV+KQG 
Sbjct: 24  RSNSEIPKTSPGGCED--EWCARVLSRRS-VMASG---LVSSTTALAFPREGLAVVKQGL 83

Query: 90  LAGRVPGLSEPDEQGWRTYQRPDDKSGGHGVGWSPIIPYLFKVSGDWDEVPVSIADLGGT 149
           LAGRVPGLSEPDE+GWRTY+RPD+KSGGHGVGWSPIIPY F V  DW+EVPVSIADLGGT
Sbjct: 84  LAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGT 143

Query: 150 EIDLRFANPKQGRLFVIVAPVRRFSDVLGDNTTIQEIGTPEKVISAFGPEVTGENVEGKV 209
           EIDLRFA+PK+GRL VIVAPV RF+D LGD+  I+ IG P KVI+AFGPEV GENVEGKV
Sbjct: 144 EIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKV 203

Query: 210 LSMEVAEHSGRRYYQYELEPPHVFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSF 269
           LS  VAEH GR YYQ+ELEPPHV ITATAAGNRLYLF VTG+GLQWKR+Y+DLKRIA SF
Sbjct: 204 LSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSF 260

Query: 270 RIV 273
           RIV
Sbjct: 264 RIV 260

[Close]

BLAST of Spo21631.1 vs. TAIR (Arabidopsis)
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.900e-17
Identity = 49/160 (30.63%), Postives = 88/160 (55.00%), Query Frame = 1


		  
Query: 127 PYLFKVSGDWDEVPVSIADLGG--------TEIDLRFANPKQGRLFVIVAPVRRFSDVLG 186
           PY F +  +W ++ ++    G           I+++F N KQG++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNK-- 164

Query: 187 DNTTIQEIGTPEKVISAFGPEVTGENVEG-KVLSMEVAEHSGRRYYQYELEPP------H 246
            N TI+++G PEKVI++ GP VTG + +  ++L   + +   + YY+Y LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 247 VFITATAAGNRLYLFCVTGSGLQWKRNYQDLKRIAQSFRI 272
               ATA G+ + LF V+ +  QW+ + + L+ I  SF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of Spo21631.1 vs. TAIR (Arabidopsis)
Match: AT3G63540.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 59.7 bits (143), Expect = 3.200e-9
Identity = 40/149 (26.85%), Postives = 66/149 (44.30%), Query Frame = 1


		  
Query: 131 KVSGDWDEVPVSIADLGGTEIDLRFANPK---QGRLFVIVAPVRRFS--DVLGDNTTIQE 190
           +V   W E  VS  + G    D  F NPK   +      +A  R+ +  DV+ +N  + +
Sbjct: 3   EVEEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFLAGFRQLAPRDVILNNLALSD 62

Query: 191 IGTPEKVISAFGPEVTGENVEGKVLSMEVAEHSGRRYYQYELE--PPHVFITATAAGNRL 250
           +   + +  A            KV+S E  + +G+ YY YE++    H  IT T + N+L
Sbjct: 63  VELQDLIAGA-----------DKVVSEERKDETGQVYYLYEIDGVGKHSLITVTCSKNKL 122

Query: 251 YLFCVTGSGLQWKRNYQDLKRIAQSFRIV 273
           Y   V     +W R++  L  +  SF+ V
Sbjct: 123 YAHFVNAPAPEWNRDHDTLTHLRDSFKTV 140

The following BLAST results are available for this feature:

BLAST of Spo21631.1 vs. NCBI nr
BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
BLAST of Spo21631.1 vs. ExPASy Swiss-Prot
BLAST of Spo21631.1 vs. TAIR (Arabidopsis)

BLAST of Spo21631.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902192979\|gb\|KNA12169.1\|	5.3e-155	100.	hypothetical protein SOVF_1283...	[more]
gi\|731313352\|ref\|XP_010679853.1\|	1.6e-119	79.5	PREDICTED: psbP domain-contain...	[more]
gi\|731313350\|ref\|XP_010679845.1\|	9.2e-115	71.8	PREDICTED: psbP domain-contain...	[more]
gi\|848909187\|ref\|XP_012853413.1\|	5.1e-97	80.5	PREDICTED: psbP domain-contain...	[more]
gi\|747056994\|ref\|XP_011074779.1\|	7.3e-96	77.9	PREDICTED: psbP domain-contain...	[more]

BLAST of Spo21631.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QY22_SPIOL	3.7e-155	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D0X6_BETVU	1.1e-119	79.5	Uncharacterized protein OS=Bet...	[more]
A0A022Q594_ERYGU	3.5e-97	80.5	Uncharacterized protein OS=Ery...	[more]
V4T374_9ROSI	1.5e-95	69.4	Uncharacterized protein OS=Cit...	[more]
B9SJK7_RICCO	1.5e-95	78.7	Thylakoid lumenal 29.8 kDa pro...	[more]

BLAST of Spo21631.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
PPD4_ARATH	9.0e-94	71.6	PsbP domain-containing protein...	[more]
PPD6_ARATH	3.4e-16	30.6	PsbP domain-containing protein...	[more]
TL19_ARATH	1.8e-9	27.6	Thylakoid lumenal 19 kDa prote...	[more]

BLAST of Spo21631.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G77090.1	5.0e-95	71.6	Mog1/PsbP/DUF1795-like photosy...	[more]
AT3G56650.1	1.9e-17	30.6	Mog1/PsbP/DUF1795-like photosy...	[more]
AT3G63540.1	3.2e-9	26.8	Mog1/PsbP/DUF1795-like photosy...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP family	PFAM	PF01789	PsbP	coord: 130..271 score: 1.
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	GENE3D	3.40.1000.10		coord: 115..271 score: 1.4
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	unknown	SSF55724	Mog1p/PsbP-like	coord: 121..271 score: 6.28
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 36..272 score: 1.2E
None	No IPR available	PANTHER	PTHR31407:SF18	PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 36..272 score: 1.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009543	chloroplast thylakoid lumen
molecular_function	GO:0005509	calcium ion binding