Spo21361.1 (mRNA) | SpinachBase

Overview


Name	Spo21361.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	NAD(P)H-quinone oxidoreductase subunit S, chloroplastic (1.6.5.-) (NAD(P)H dehydrogenase subunit S) (NDH subunit S) (NADH-plastoquinone oxidoreductase subunit S) (Protein CHLORORESPIRATORY REDUCTION 31) (Precursor)
Location	chr6 : 39370179 .. 39370940 (-)
Sequence length	762

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

mRNA sequence

ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

Coding sequence (CDS)

ATGGCATCTTCTTCCTTATCACCCCCAAGCTTCCAAGGTGCCCTTCTTCACAAATCCCAATTTCTTGGCCAAAACCACATCAAACTACTAACTCAAAGATCAATCTCCACTTCATGTCCCAAAACAACAATCACAGTTTCTGCTAAATTTGATCTGTACGGAATCTTAGGTGGCAGAGGTTTATGCAACGGCGAAACTGGCATCATTGAAGAGCTAAAGAAAGAAAGTCCAATCCCACCACAACAAAAAACCGAGAAAAACAAAGAGGAAGATTTGGATGACAAAGCAGTTGAAACCTCAAAAATTGATGAGAAAATACCAGAAGGTGCTTTCGATAAGGAGCTTTTAGGCCTTACTGGTGGATTTCCTGGTGGCGAAACAGGCCTCAGGAAATTCATCGAGAAAAACCCACCACCACCTAAAAAGAATAAAGGAGATGAAGAAATGAAGATGGTAATGAATTCAAAGAAGTCGAAACCACCTGAATTGCCATTGTTGTTGCCGGGAATGATCGCCCTTGTTAAGAACCCGAACAATCCATACTATATGTATTGTGGTATTGTGCAGAGGATTACTGATGGTAAAGCTGGAGTGCTGTTTGAAGGAGGGAATTGGGATAGGCTGATTACCTTCAGGCTTGAGGAGCTTGAGAGGAGAGAGAAGGGCCCACCAATGACGAATCCAAAGTCTGTTGTGCTTGAACCTATGATTGAAATGCTTGAAAAACAATCATCAACAACAAGTAGTGACATACCTCAGTAA

Protein sequence

MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEMLEKQSSTTSSDIPQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21361	Spo21361	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21361.1	Spo21361.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21361.1.CDS.1	Spo21361.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21361.1.exon.1	Spo21361.1.exon.1	exon

Homology

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BLAST of Spo21361.1 vs. NCBI nr
Match: gi|902225773|gb|KNA20189.1| (hypothetical protein SOVF_054670 [Spinacia oleracea])

HSP 1 Score: 502.7 bits (1293), Expect = 3.800e-139
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG
Sbjct: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG
Sbjct: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180
           GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180

Query: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240
           YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML
Sbjct: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240

Query: 241 EKQSSTTSSDIPQ 254
           EKQSSTTSSDIPQ
Sbjct: 241 EKQSSTTSSDIPQ 253

[Close]

BLAST of Spo21361.1 vs. NCBI nr
Match: gi|731330729|ref|XP_010676290.1| (PREDICTED: uncharacterized protein LOC104892149 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 384.8 bits (987), Expect = 1.200e-103
Identity = 197/249 (79.12%), Postives = 217/249 (87.15%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTI---TVSAKFDLYGILG 60
           MA SSLSPPSFQGALLHKS FLGQNHIKL TQ+SIST CPKT     T++AKFDLY ILG
Sbjct: 1   MAVSSLSPPSFQGALLHKSHFLGQNHIKLSTQKSISTLCPKTISNKPTITAKFDLYQILG 60

Query: 61  GRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLG 120
           GRGLCNGE GIIEELKK++  PPQ+   +  EED D+KA+  S I+E IPE AF+KELLG
Sbjct: 61  GRGLCNGEAGIIEELKKDTQNPPQKS--EGSEEDFDNKAITASNIEEIIPENAFEKELLG 120

Query: 121 LTGGFPGGETGLRKFIEKNPPPPK-KNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           LTGGFPGGE GL+KFIEKNPPPPK +NK +E+MKMV++SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 LTGGFPGGEKGLKKFIEKNPPPPKTENKQNEDMKMVLSSKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 240
           PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRE GPPMTN KS VLEP+
Sbjct: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRENGPPMTNAKSAVLEPL 240

Query: 241 IEMLEKQSS 246
           IEMLE QS+
Sbjct: 241 IEMLENQST 247

[Close]

BLAST of Spo21361.1 vs. NCBI nr
Match: gi|734322697|gb|KHN04639.1| (hypothetical protein glysoja_021938 [Glycine soja])

HSP 1 Score: 271.2 bits (692), Expect = 1.900e-69
Identity = 143/242 (59.09%), Postives = 181/242 (74.79%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPK--TTITVSAKFDLYGILGG 60
           M SS +      G+LL +SQFLGQ+ +  L  R+ +++     TT    AKFD+  +LGG
Sbjct: 1   MMSSFVVLHGLHGSLL-RSQFLGQDTLTHLYPRNKASTIHNKPTTAQPRAKFDMLQVLGG 60

Query: 61  RGLCNGETGIIEELKKESPIPPQQKTE--KNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           RGLCNGE G+ +ELK+E  +  +       +KE++L++++  T  +     E  F+KEL+
Sbjct: 61  RGLCNGEAGLKQELKRELGVDEKAPASATSDKEQELEEESSTTQSLASVAAEDGFEKELM 120

Query: 121 GLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           GLTGGFPGGE GL+KFI++NPPP K ++G + +K+ + SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 GLTGGFPGGEKGLKKFIQENPPPLKPSQGSKSLKLAL-SKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 239
           PNNP+YMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPM NPKS VLEP 
Sbjct: 181 PNNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSAVLEPF 240

[Close]

BLAST of Spo21361.1 vs. NCBI nr
Match: gi|351725529|ref|NP_001235560.1| (uncharacterized protein LOC100527145 [Glycine max])

HSP 1 Score: 269.2 bits (687), Expect = 7.100e-69
Identity = 142/242 (58.68%), Postives = 180/242 (74.38%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPK--TTITVSAKFDLYGILGG 60
           M SS +      G+LL +SQFLGQ+ +  L  R+ +++     TT    AKFD+  +LGG
Sbjct: 1   MMSSFVVLHGLHGSLL-RSQFLGQDTLTHLYPRNKASTIHNKPTTAQPRAKFDMLQVLGG 60

Query: 61  RGLCNGETGIIEELKKESPIPPQQKTE--KNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           RGLCNGE G+ +ELK+E  +  +       +KE++L++++  T  +     E  F+KEL+
Sbjct: 61  RGLCNGEAGLKQELKRELGVDEKAPASATSDKEQELEEESSTTQSLASVAAEDGFEKELM 120

Query: 121 GLTGGFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           GLTGGFPGGE GL+KFI++NPPP K ++G + +K+ +  KK KPPELPLLLPGMIA+VKN
Sbjct: 121 GLTGGFPGGEKGLKKFIQENPPPLKPSQGSKSLKLAL-PKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 239
           PNNP+YMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPM NPKS VLEP 
Sbjct: 181 PNNPFYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSAVLEPF 240

[Close]

BLAST of Spo21361.1 vs. NCBI nr
Match: gi|147767601|emb|CAN73381.1| (hypothetical protein VITISV_003162 [Vitis vinifera])

HSP 1 Score: 268.1 bits (684), Expect = 1.600e-68
Identity = 140/235 (59.57%), Postives = 172/235 (73.19%), Query Frame = 1


		  
Query: 5   SLSPPSFQGALLHKSQFLGQNHIKLLTQR-SISTSCPKTTITVSAKFDLYGILGGRGLCN 64
           S + PS Q  L HKS FLGQ H     Q+ S+S +     +  SAKFDL+GI+GGRGLCN
Sbjct: 4   SFTVPSLQRPLPHKSHFLGQGHFPNNIQKASLSRTRTPLPVKASAKFDLFGIMGGRGLCN 63

Query: 65  GETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTGGFP 124
           GE G+ +ELK+     P   + K++E+         + +D+ +PE  FDKELLGLTGGFP
Sbjct: 64  GEEGLQQELKRNIEPAPSPDSVKDEEKPA------LAAVDD-VPEDGFDKELLGLTGGFP 123

Query: 125 GGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNPYYM 184
           GGE GL++F+EKNPPP K +    E   +   +K KPPELPLL+PGMIA+VKNPNNP+YM
Sbjct: 124 GGEKGLKQFLEKNPPPEKTSGNIIENARL---RKPKPPELPLLMPGMIAIVKNPNNPFYM 183

Query: 185 YCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIE 239
           YCGIVQRITDGKAGVLFEGGNWDRLITFRLEEL+RR+KGPPM NPKS +LE ++E
Sbjct: 184 YCGIVQRITDGKAGVLFEGGNWDRLITFRLEELQRRDKGPPMKNPKSAILETLLE 228

[Close]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054670 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.700e-139
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG
Sbjct: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG
Sbjct: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180
           GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKNPNNP 180

Query: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240
           YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML
Sbjct: 181 YYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMIEML 240

Query: 241 EKQSSTTSSDIPQ 254
           EKQSSTTSSDIPQ
Sbjct: 241 EKQSSTTSSDIPQ 253

[Close]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIK5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098780 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.100e-104
Identity = 197/249 (79.12%), Postives = 217/249 (87.15%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTI---TVSAKFDLYGILG 60
           MA SSLSPPSFQGALLHKS FLGQNHIKL TQ+SIST CPKT     T++AKFDLY ILG
Sbjct: 1   MAVSSLSPPSFQGALLHKSHFLGQNHIKLSTQKSISTLCPKTISNKPTITAKFDLYQILG 60

Query: 61  GRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLG 120
           GRGLCNGE GIIEELKK++  PPQ+   +  EED D+KA+  S I+E IPE AF+KELLG
Sbjct: 61  GRGLCNGEAGIIEELKKDTQNPPQKS--EGSEEDFDNKAITASNIEEIIPENAFEKELLG 120

Query: 121 LTGGFPGGETGLRKFIEKNPPPPK-KNKGDEEMKMVMNSKKSKPPELPLLLPGMIALVKN 180
           LTGGFPGGE GL+KFIEKNPPPPK +NK +E+MKMV++SKK KPPELPLLLPGMIA+VKN
Sbjct: 121 LTGGFPGGEKGLKKFIEKNPPPPKTENKQNEDMKMVLSSKKPKPPELPLLLPGMIAIVKN 180

Query: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPM 240
           PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRE GPPMTN KS VLEP+
Sbjct: 181 PNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERRENGPPMTNAKSAVLEPL 240

Query: 241 IEMLEKQSS 246
           IEMLE QS+
Sbjct: 241 IEMLENQST 247

[Close]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZW5_EROTE (Chlororespiratory reduction31 OS=Erodium texanum GN=NDHS PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.700e-72
Identity = 155/248 (62.50%), Postives = 180/248 (72.58%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITV----SAKFDLYGIL 60
           MASSSL+ PS QG  L KS FLG   +   +Q+    S PK   T     SAKFDL+ IL
Sbjct: 1   MASSSLTLPSLQGPQL-KSHFLGTKILPRNSQKPFF-SVPKQRSTTYPKASAKFDLFQIL 60

Query: 61  GGRGLCNGETGIIEELKK---ESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDK 120
           GGRGLCNGE GI +ELKK   ++   P   TE            E S    ++PE  FDK
Sbjct: 61  GGRGLCNGEKGIEQELKKSIEQASTSPSASTE-----------TEQSSGSVQVPEDGFDK 120

Query: 121 ELLGLTGGFPGGETGLRKFIEKNPPPPKKNK---GDEEMKMVMNSKKSKPPELPLLLPGM 180
           EL+GLTGGFPGGETGL+KFIEKNPPPPKK K   G+++M  +  SKK+K PELPLL+PGM
Sbjct: 121 ELMGLTGGFPGGETGLKKFIEKNPPPPKKTKSAKGEDDMVALATSKKAKAPELPLLMPGM 180

Query: 181 IALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKS 239
           IA+VKNPNNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRL+ELERREKGPP  NPKS
Sbjct: 181 IAIVKNPNNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLDELERREKGPPAKNPKS 235

[Close]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZA4_9ROSI (Chlororespiratory reduction31 OS=Erodium trifolium GN=NDHS PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.300e-72
Identity = 147/241 (61.00%), Postives = 177/241 (73.44%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTTITVSAKFDLYGILGGRG 60
           MASSS++ P+ QG  L KS FLG+  +   +  S+S     +    SAKFDL+ ILGGRG
Sbjct: 1   MASSSITLPTLQGPQL-KSHFLGRKILPTNSFFSVSKHRSASYPKASAKFDLFQILGGRG 60

Query: 61  LCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELLGLTG 120
           LCNGE GI +ELKK     P      + E+        +   +  +P+  FDKEL+GLTG
Sbjct: 61  LCNGEKGIEQELKKSIEEQPSPSASTDTEQS-------SGSAEVPVPDDGFDKELMGLTG 120

Query: 121 GFPGGETGLRKFIEKNPPPPKKNK---GDEEMKMVMNSKKSKPPELPLLLPGMIALVKNP 180
           GFPGGETGLRKFIEKNPPPPKK K   G+++M  +  SKK+K PELPLL+PGMIA+VKNP
Sbjct: 121 GFPGGETGLRKFIEKNPPPPKKTKSAKGEDDMVALATSKKAKAPELPLLMPGMIAIVKNP 180

Query: 181 NNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVLEPMI 239
           NNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRLEELERREKGPP  NPKSVVLE ++
Sbjct: 181 NNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLEELERREKGPPAKNPKSVVLEALV 233

[Close]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZW0_9ROSI (Chlororespiratory reduction31 OS=California macrophylla GN=NDHS PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.900e-71
Identity = 158/248 (63.71%), Postives = 178/248 (71.77%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQ-----NHIKLL--TQRSISTSCPKTTITVSAKFDLY 60
           MASSS++ PS QG  L KS FLG+     N  KL     +  STS PK     SAKFDL+
Sbjct: 1   MASSSITLPSLQGPQL-KSHFLGRKILPGNSHKLFFSVSKQRSTSYPKA----SAKFDLF 60

Query: 61  GILGGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDK 120
            ILGGRGLCNGE GI EELKK   I     +     E       E S +  K PE  FDK
Sbjct: 61  QILGGRGLCNGEKGIEEELKKS--IEETAPSLSASAETEQSSGSEESSV--KAPEDGFDK 120

Query: 121 ELLGLTGGFPGGETGLRKFIEKNPPPPKKN---KGDEEMKMVMNSKKSKPPELPLLLPGM 180
           EL+GLTGGFPGGETGLRKFIEKNPPPPKK    KG+++   +  SKK K PELPLL+PGM
Sbjct: 121 ELMGLTGGFPGGETGLRKFIEKNPPPPKKATPAKGEDKTVALATSKKMKAPELPLLMPGM 180

Query: 181 IALVKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKS 239
           IA+VKNPNNP+YMYCGIVQRITDG+AGVLFEGGNWD+LITFRLEELERREKGPP  NP+S
Sbjct: 181 IAIVKNPNNPFYMYCGIVQRITDGRAGVLFEGGNWDKLITFRLEELERREKGPPAKNPRS 239

[Close]

BLAST of Spo21361.1 vs. ExPASy Swiss-Prot
Match: NDHS_ARATH (NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana GN=ndhS PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.900e-67
Identity = 136/252 (53.97%), Postives = 179/252 (71.03%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTT----ITVSAKFDLYGIL 60
           MA+SS++ P+ +  + H+S+FLGQ H      RS+     + +    +    KF+L+ ++
Sbjct: 1   MATSSITIPTIRTPI-HRSKFLGQTHQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVM 60

Query: 61  GGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           GGRGLCNGE GI +EL++   I  +Q+T K  E +  ++  + S +  K+PE  F+KE++
Sbjct: 61  GGRGLCNGEKGIEKELQRN--IEDEQETSK-AENNETERESDDSNLSFKVPEDGFEKEMM 120

Query: 121 GLTGGFPGGETGLRKFIEKN---PPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIAL 180
           GLTGGFPGGE GL+ FIEKN   PPPP   K   +   V   KK K P+LPLL+PGMIA+
Sbjct: 121 GLTGGFPGGEKGLKTFIEKNPPPPPPPPPAKQGSDASAVATDKKPKAPKLPLLMPGMIAI 180

Query: 181 VKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVL 240
           VKN N+PY+MYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPP  NPKS +L
Sbjct: 181 VKNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSCIL 240

Query: 241 EPMIEMLEKQSS 246
           EP+IE ++K+ +
Sbjct: 241 EPLIEQMQKEEA 248

[Close]

BLAST of Spo21361.1 vs. TAIR (Arabidopsis)
Match: AT4G23890.1 (unknown protein)

HSP 1 Score: 256.1 bits (653), Expect = 2.200e-68
Identity = 136/252 (53.97%), Postives = 179/252 (71.03%), Query Frame = 1


		  
Query: 1   MASSSLSPPSFQGALLHKSQFLGQNHIKLLTQRSISTSCPKTT----ITVSAKFDLYGIL 60
           MA+SS++ P+ +  + H+S+FLGQ H      RS+     + +    +    KF+L+ ++
Sbjct: 1   MATSSITIPTIRTPI-HRSKFLGQTHQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVM 60

Query: 61  GGRGLCNGETGIIEELKKESPIPPQQKTEKNKEEDLDDKAVETSKIDEKIPEGAFDKELL 120
           GGRGLCNGE GI +EL++   I  +Q+T K  E +  ++  + S +  K+PE  F+KE++
Sbjct: 61  GGRGLCNGEKGIEKELQRN--IEDEQETSK-AENNETERESDDSNLSFKVPEDGFEKEMM 120

Query: 121 GLTGGFPGGETGLRKFIEKN---PPPPKKNKGDEEMKMVMNSKKSKPPELPLLLPGMIAL 180
           GLTGGFPGGE GL+ FIEKN   PPPP   K   +   V   KK K P+LPLL+PGMIA+
Sbjct: 121 GLTGGFPGGEKGLKTFIEKNPPPPPPPPPAKQGSDASAVATDKKPKAPKLPLLMPGMIAI 180

Query: 181 VKNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMTNPKSVVL 240
           VKN N+PY+MYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPP  NPKS +L
Sbjct: 181 VKNQNSPYHMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPGKNPKSCIL 240

Query: 241 EPMIEMLEKQSS 246
           EP+IE ++K+ +
Sbjct: 241 EPLIEQMQKEEA 248

The following BLAST results are available for this feature:

BLAST of Spo21361.1 vs. NCBI nr
BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
BLAST of Spo21361.1 vs. ExPASy Swiss-Prot
BLAST of Spo21361.1 vs. TAIR (Arabidopsis)

BLAST of Spo21361.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902225773\|gb\|KNA20189.1\|	3.8e-139	100.	hypothetical protein SOVF_0546...	[more]
gi\|731330729\|ref\|XP_010676290.1\|	1.2e-103	79.1	PREDICTED: uncharacterized pro...	[more]
gi\|734322697\|gb\|KHN04639.1\|	1.9e-69	59.0	hypothetical protein glysoja_0...	[more]
gi\|351725529\|ref\|NP_001235560.1\|	7.1e-69	58.6	uncharacterized protein LOC100...	[more]
gi\|147767601\|emb\|CAN73381.1\|	1.6e-68	59.5	hypothetical protein VITISV_00...	[more]

BLAST of Spo21361.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RMQ4_SPIOL	2.7e-139	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CIK5_BETVU	8.1e-104	79.1	Uncharacterized protein OS=Bet...	[more]
A0A0F7GZW5_EROTE	3.7e-72	62.5	Chlororespiratory reduction31 ...	[more]
A0A0F7GZA4_9ROSI	6.3e-72	61.0	Chlororespiratory reduction31 ...	[more]
A0A0F7GZW0_9ROSI	6.9e-71	63.7	Chlororespiratory reduction31 ...	[more]

BLAST of Spo21361.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
NDHS_ARATH	3.9e-67	53.9	NAD(P)H-quinone oxidoreductase...	[more]

BLAST of Spo21361.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G23890.1	2.2e-68	53.9	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021659	Protein of unknown function DUF3252	PFAM	PF11623	DUF3252	coord: 166..217 score: 2.1
None	No IPR available	PANTHER	PTHR35494	FAMILY NOT NAMED	coord: 1..251 score: 3.8E
None	No IPR available	PANTHER	PTHR35494:SF1	SUBFAMILY NOT NAMED	coord: 1..251 score: 3.8E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009637	response to blue light
cellular_component	GO:0009535	chloroplast thylakoid membrane