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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGGCCTTGATTCATCCTTTGAGGTCTTGGCCTTTATCCCAGTTAATCTTGGCCCTTTATTATCCGCCACGGTAAACAATCTCTGGGCCTGGCTCGCCGTCATCACCGCCGCCTTTAGCTTCTGGCGCCTCCGTTCCTCCTCCTCCCACGTTATTTTCCCTCCTCCACCTCCACCACCATCAAAACCAATAGAACCAACTCCGACGACGTCGTTTGACGGAAATGGCATTGCGGAGGAGAGCGAAAATGTAGAAGAAGAAGAAGAAAAGGAGGAGGAAAGGGTGTTGACGAGGGGTAACAGTAAAAAGTTTTTTACTGTTTTCGAAGAGGATAGAGAAAATGATCAAGAGGATGACGATGATAATCATCACGATGAGATGGACGGTCAGGATGAAGTTGAGGAGGAGAAGAATGAATGGGTGGTGATTAAGAGGTGGGGATCATCATCAGAATTAACGGTAGAGATGAGAGGTGGTGATTTTGGTTGGTATAGTTACCAAAATAGGAAAGTGATTGATGGGAGTGTGGTTAGATTGTGGAGGGAGGAGAGAGAAAATGTTACCGTCCGTAAAAACTTTGTCTACTCACCGCGTAAATTATCCACCTCTAATAGCTTCTAAATGAACGGCCTTGATTCATCCTTTGAGGTCTTGGCCTTTATCCCAGTTAATCTTGGCCCTTTATTATCCGCCACGGTAAACAATCTCTGGGCCTGGCTCGCCGTCATCACCGCCGCCTTTAGCTTCTGGCGCCTCCGTTCCTCCTCCTCCCACGTTATTTTCCCTCCTCCACCTCCACCACCATCAAAACCAATAGAACCAACTCCGACGACGTCGTTTGACGGAAATGGCATTGCGGAGGAGAGCGAAAATGTAGAAGAAGAAGAAGAAAAGGAGGAGGAAAGGGTGTTGACGAGGGGTAACAGTAAAAAGTTTTTTACTGTTTTCGAAGAGGATAGAGAAAATGATCAAGAGGATGACGATGATAATCATCACGATGAGATGGACGGTCAGGATGAAGTTGAGGAGGAGAAGAATGAATGGGTGGTGATTAAGAGGTGGGGATCATCATCAGAATTAACGGTAGAGATGAGAGGTGGTGATTTTGGTTGGTATAGTTACCAAAATAGGAAAGTGATTGATGGGAGTGTGGTTAGATTGTGGAGGGAGGAGAGAGAAAATGTTACCGTCCGTAAAAACTTTGTCTACTCACCGCGTAAATTATCCACCTCTAATAGCTTCTAA ATGAACGGCCTTGATTCATCCTTTGAGGTCTTGGCCTTTATCCCAGTTAATCTTGGCCCTTTATTATCCGCCACGGTAAACAATCTCTGGGCCTGGCTCGCCGTCATCACCGCCGCCTTTAGCTTCTGGCGCCTCCGTTCCTCCTCCTCCCACGTTATTTTCCCTCCTCCACCTCCACCACCATCAAAACCAATAGAACCAACTCCGACGACGTCGTTTGACGGAAATGGCATTGCGGAGGAGAGCGAAAATGTAGAAGAAGAAGAAGAAAAGGAGGAGGAAAGGGTGTTGACGAGGGGTAACAGTAAAAAGTTTTTTACTGTTTTCGAAGAGGATAGAGAAAATGATCAAGAGGATGACGATGATAATCATCACGATGAGATGGACGGTCAGGATGAAGTTGAGGAGGAGAAGAATGAATGGGTGGTGATTAAGAGGTGGGGATCATCATCAGAATTAACGGTAGAGATGAGAGGTGGTGATTTTGGTTGGTATAGTTACCAAAATAGGAAAGTGATTGATGGGAGTGTGGTTAGATTGTGGAGGGAGGAGAGAGAAAATGTTACCGTCCGTAAAAACTTTGTCTACTCACCGCGTAAATTATCCACCTCTAATAGCTTCTAA MNGLDSSFEVLAFIPVNLGPLLSATVNNLWAWLAVITAAFSFWRLRSSSSHVIFPPPPPPPSKPIEPTPTTSFDGNGIAEESENVEEEEEKEEERVLTRGNSKKFFTVFEEDRENDQEDDDDNHHDEMDGQDEVEEEKNEWVVIKRWGSSSELTVEMRGGDFGWYSYQNRKVIDGSVVRLWREERENVTVRKNFVYSPRKLSTSNSF Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo21194.1 vs. NCBI nr
Match: gi|902178341|gb|KNA09118.1| (hypothetical protein SOVF_156300, partial [Spinacia oleracea]) HSP 1 Score: 316.2 bits (809), Expect = 4.100e-83 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Spo21194.1 vs. NCBI nr
Match: gi|731376375|ref|XP_010667546.1| (PREDICTED: testis-specific Y-encoded-like protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 179.5 bits (454), Expect = 6.100e-42 Identity = 117/219 (53.42%), Postives = 139/219 (63.47%), Query Frame = 1
BLAST of Spo21194.1 vs. NCBI nr
Match: gi|870841673|gb|KMS95309.1| (hypothetical protein BVRB_009490 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 99.0 bits (245), Expect = 1.000e-17 Identity = 62/112 (55.36%), Postives = 71/112 (63.39%), Query Frame = 1
BLAST of Spo21194.1 vs. NCBI nr
Match: gi|697094927|ref|XP_009608776.1| (PREDICTED: uncharacterized protein LOC104102694 [Nicotiana tomentosiformis]) HSP 1 Score: 82.4 bits (202), Expect = 1.000e-12 Identity = 68/199 (34.17%), Postives = 100/199 (50.25%), Query Frame = 1
BLAST of Spo21194.1 vs. NCBI nr
Match: gi|747092254|ref|XP_011093879.1| (PREDICTED: uncharacterized protein LOC105173717 [Sesamum indicum]) HSP 1 Score: 79.3 bits (194), Expect = 8.500e-12 Identity = 66/194 (34.02%), Postives = 98/194 (50.52%), Query Frame = 1
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQZ7_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_156300 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 2.900e-83 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B2G5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_009490 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.300e-18 Identity = 62/112 (55.36%), Postives = 71/112 (63.39%), Query Frame = 1
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Match: A0A022QEW1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020072mg PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.600e-10 Identity = 68/198 (34.34%), Postives = 92/198 (46.46%), Query Frame = 1
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Match: U5G7G5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s14000g PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.700e-9 Identity = 65/186 (34.95%), Postives = 86/186 (46.24%), Query Frame = 1
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q8Q9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G037400 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.100e-8 Identity = 67/196 (34.18%), Postives = 90/196 (45.92%), Query Frame = 1
BLAST of Spo21194.1 vs. TAIR (Arabidopsis)
Match: AT3G43110.1 (unknown protein) HSP 1 Score: 62.4 bits (150), Expect = 3.800e-10 Identity = 66/200 (33.00%), Postives = 92/200 (46.00%), Query Frame = 1
BLAST of Spo21194.1 vs. TAIR (Arabidopsis)
Match: AT5G20790.1 (unknown protein) HSP 1 Score: 48.9 bits (115), Expect = 4.400e-6 Identity = 60/200 (30.00%), Postives = 90/200 (45.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21194.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21194.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21194.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo21194.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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