Spo20730.1 (mRNA) | SpinachBase

Overview


Name	Spo20730.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Grap2/cyclin-D-interacting protein
Location	chr3 : 100658166 .. 100660062 (-)
Sequence length	1044

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTCTATAGGTAATTTGTGGACTGATCTTGTGGTAATAGATGGGAGCAAATTAATTACACTAATGTCTTTTTTCCTCGGTTAGAAAAAAAGACATAAATATTCTAGGTTCTTTTTGATTGTCAGGGAGGGAGTGTTGCATCCTTGTATGTATCTTTGTGAACCTGTAGCATTTTGGCTTGCCATATGATTTTATCGTTTCCTAATAATCTGTTTGCAATCTCTTCTTCATCTCTTTAATTCAAAAGCTATCATGTCTAGTGATGTTGGAAGAGATTATGCTATTCAATTTGTCACTTTTTTGCTTTGGTCCAATTTATTTATTCTTGCATTCTTGTACCCCCCCCCTCCAGAAATGATAGAAGATGCTGTTGCAACTTTTGTGATCTTGTCAAGACTTGGTTAGCGATAAGAACTAGTTATTAATATGGCTATTAACCCACTCTAAGAATGTATATACGCCCGGCACCCTTCAAATGGGTAGTTTGTTTAGCACAGACTTTCGATCTTGTGATGCTGATATAAAACTGCTACTCAGTTAGGTCCTCTATTTACCTGTCACTTTATTGGTTACATTTATTAATTTCTTGCTCTGCTTCCTGCAATAGTTACAAATTACTGCTACCTTACTTCCCATTACTACATCTCTTACTTACGCCCTTGTAAACAATGAAATGTGTCCCTATCAAACATTTAATGGAGTTTGTATTTACGTCTCTGTGGAATCGCAGTTTGTGTTATCCTAAAGTGCCAGACTGCCAACATGTTTGTAGAGTTGTTGGCAATGTCGTTTTGGTTATTAGAATGTTAGGTTTAAAATACCGTTTAATGCTCTAACGGATCATTTTTATTTATTACCACCAGGGCCTAGTGGTAGTGAGAAGAAGTGCACCATTCCACAGTTAGCTGGCACAGTCTGGGAAGCATGTTCTTCTCTCAAGAAGACTCCTGCTACAAATATAGTTGCAATAGGGCGTGCGATAACACAAGTTGCTGTTTCAATTAAAGACGTATTACGTGAAATGAAAGAACTTGAGCCGTGTTCATCTGATCCAAACAGTGAAGCAGAAAGCCAAGGCCAGGAAAGCAATATCTCTGATGTTGATGCTGATGATGAGTTTGGTAAAGACTTATCACCTGAAGAGATGAAAGTTGCTCAATTAGCAGTAGTGATTGTGTCAGAACTGGTTACCGTCATCAAGGAACTTATACGATCAATTACTGGTTTACTGAAGAAGGAAACCCGTAATCATGAGCATGATGGAGTTGAGTCCTTGGAAAAGCTTTTGAAGCTTTGTCGTGGAATTGGGATTCAGGTAGATGAGCTTGGAGCTTGTCTATATCCACCACAAGAACTGTCAGCAATAACTAAATCATGCAAAGAATTATCTGATTTGATAGATGAAGTGAGTAAAGAATTGGACTGTTTAAATGGATCTACAGATGCTTTCTCTGAGAGATGCAACACATTGAAGACTGCCTTGGGAGTTTTGAAAATAGAAATTTCCGACTCTGTTGCTGCTGATGCTGTTCGGCAAAATTCTAGTGGCTTAAATGTAGTAGAGCAAATGCATAATCTTGCTGTAAACGATTGATAATCTTACGTTCTCCCTCTTAGCTCCTAATCTCCTACTGTCACCCTTATTGGTAGAGTTTATTGAACAGCATTATGATCACTGTCTCTACAAGACTTGAATGCCTGTATAAAATGTAACATGTGACCCAAAATTGTCACATTCATGATTTCCATCTCATATCAAAGTACCAACCTCCTAACATATTGATTCAAAACATATACGGAGTATTGCCTTTGTAACAGGTTGATGCTCCAATGGTGTTGGTGTTTCAATTTCTTGGATATACTTGTGTTCGATAGAGTTGAAATAATAGAC

mRNA sequence

ATGAAAGATTCTATAGGGCCTAGTGGTAGTGAGAAGAAGTGCACCATTCCACAGTTAGCTGGCACAGTCTGGGAAGCATGTTCTTCTCTCAAGAAGACTCCTGCTACAAATATAGTTGCAATAGGGCGTGCGATAACACAAGTTGCTGTTTCAATTAAAGACGTATTACGTGAAATGAAAGAACTTGAGCCGTGTTCATCTGATCCAAACAGTGAAGCAGAAAGCCAAGGCCAGGAAAGCAATATCTCTGATGTTGATGCTGATGATGAGTTTGGTAAAGACTTATCACCTGAAGAGATGAAAGTTGCTCAATTAGCAGTAGTGATTGTGTCAGAACTGGTTACCGTCATCAAGGAACTTATACGATCAATTACTGGTTTACTGAAGAAGGAAACCCGTAATCATGAGCATGATGGAGTTGAGTCCTTGGAAAAGCTTTTGAAGCTTTGTCGTGGAATTGGGATTCAGGTAGATGAGCTTGGAGCTTGTCTATATCCACCACAAGAACTGTCAGCAATAACTAAATCATGCAAAGAATTATCTGATTTGATAGATGAAGTGAGTAAAGAATTGGACTGTTTAAATGGATCTACAGATGCTTTCTCTGAGAGATGCAACACATTGAAGACTGCCTTGGGAGTTTTGAAAATAGAAATTTCCGACTCTGTTGCTGCTGATGCTGTTCGGCAAAATTCTAGTGGCTTAAATGTAGTAGAGCAAATGCATAATCTTGCTGTAAACGATTGATAATCTTACGTTCTCCCTCTTAGCTCCTAATCTCCTACTGTCACCCTTATTGGTAGAGTTTATTGAACAGCATTATGATCACTGTCTCTACAAGACTTGAATGCCTGTATAAAATGTAACATGTGACCCAAAATTGTCACATTCATGATTTCCATCTCATATCAAAGTACCAACCTCCTAACATATTGATTCAAAACATATACGGAGTATTGCCTTTGTAACAGGTTGATGCTCCAATGGTGTTGGTGTTTCAATTTCTTGGATATACTTGTGTTCGATAGAGTTGAAATAATAGAC

Coding sequence (CDS)

ATGAAAGATTCTATAGGGCCTAGTGGTAGTGAGAAGAAGTGCACCATTCCACAGTTAGCTGGCACAGTCTGGGAAGCATGTTCTTCTCTCAAGAAGACTCCTGCTACAAATATAGTTGCAATAGGGCGTGCGATAACACAAGTTGCTGTTTCAATTAAAGACGTATTACGTGAAATGAAAGAACTTGAGCCGTGTTCATCTGATCCAAACAGTGAAGCAGAAAGCCAAGGCCAGGAAAGCAATATCTCTGATGTTGATGCTGATGATGAGTTTGGTAAAGACTTATCACCTGAAGAGATGAAAGTTGCTCAATTAGCAGTAGTGATTGTGTCAGAACTGGTTACCGTCATCAAGGAACTTATACGATCAATTACTGGTTTACTGAAGAAGGAAACCCGTAATCATGAGCATGATGGAGTTGAGTCCTTGGAAAAGCTTTTGAAGCTTTGTCGTGGAATTGGGATTCAGGTAGATGAGCTTGGAGCTTGTCTATATCCACCACAAGAACTGTCAGCAATAACTAAATCATGCAAAGAATTATCTGATTTGATAGATGAAGTGAGTAAAGAATTGGACTGTTTAAATGGATCTACAGATGCTTTCTCTGAGAGATGCAACACATTGAAGACTGCCTTGGGAGTTTTGAAAATAGAAATTTCCGACTCTGTTGCTGCTGATGCTGTTCGGCAAAATTCTAGTGGCTTAAATGTAGTAGAGCAAATGCATAATCTTGCTGTAAACGATTGA

Protein sequence

MKDSIGPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEPCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHNLAVND

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20730	Spo20730	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20730.1	Spo20730.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20730.1.CDS.2	Spo20730.1.CDS.2	CDS
Spo20730.1.CDS.1	Spo20730.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20730.1.utr3p.1	Spo20730.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20730.1.exon.2	Spo20730.1.exon.2	exon
Spo20730.1.exon.1	Spo20730.1.exon.1	exon

Homology

[Close]

BLAST of Spo20730.1 vs. NCBI nr
Match: gi|902198656|gb|KNA13735.1| (hypothetical protein SOVF_114120 [Spinacia oleracea])

HSP 1 Score: 463.4 bits (1191), Expect = 2.500e-127
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 1


		  
Query: 4   SIGPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE 63
           S GPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE
Sbjct: 125 SYGPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE 184

Query: 64  PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS 123
           PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS
Sbjct: 185 PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS 244

Query: 124 ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL 183
           ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL
Sbjct: 245 ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL 304

Query: 184 IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN 243
           IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN
Sbjct: 305 IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN 364

Query: 244 LAVND 249
           LAVND
Sbjct: 365 LAVND 369

[Close]

BLAST of Spo20730.1 vs. NCBI nr
Match: gi|731341033|ref|XP_010681711.1| (PREDICTED: uncharacterized protein LOC104896639 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 342.4 bits (877), Expect = 6.500e-91
Identity = 189/244 (77.46%), Postives = 209/244 (85.66%), Query Frame = 1


		  
Query: 6   GPSGS-EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEP 65
           GP GS E++ TIP+LAGTVWEACS+LKKTPATNIVAIGRA+TQ+AVSIKDVLREMKELEP
Sbjct: 128 GPHGSSEQQTTIPRLAGTVWEACSALKKTPATNIVAIGRAMTQIAVSIKDVLREMKELEP 187

Query: 66  CSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSI 125
           CSSDP  EAESQ  ESN  DVDADDEFGKDLSPEEMKVAQLA+ +VSE + VIKELIRSI
Sbjct: 188 CSSDPTGEAESQALESN--DVDADDEFGKDLSPEEMKVAQLAIGVVSEAIIVIKELIRSI 247

Query: 126 TGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLI 185
           TGLLKKE    E DGVESLEKLLKL R IG+QVDELGACLYPPQE SAI KSCKE+S+LI
Sbjct: 248 TGLLKKENLRDEQDGVESLEKLLKLFRSIGVQVDELGACLYPPQEFSAIAKSCKEMSNLI 307

Query: 186 DEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHNL 245
           DEV KELD LNGST+AFS+ C +L  AL +L+IE S SVAADA+ QNSS  ++VEQM NL
Sbjct: 308 DEVGKELDSLNGSTEAFSKGCKSLHNALDMLQIETSASVAADAIPQNSS--DMVEQMQNL 367

Query: 246 AVND 249
           AV D
Sbjct: 368 AVQD 367

[Close]

BLAST of Spo20730.1 vs. NCBI nr
Match: gi|225424128|ref|XP_002280178.1| (PREDICTED: uncharacterized protein LOC100243961 [Vitis vinifera])

HSP 1 Score: 240.7 bits (613), Expect = 2.700e-60
Identity = 132/254 (51.97%), Postives = 176/254 (69.29%), Query Frame = 1


		  
Query: 1   MKDSIGPSGS---EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLR 60
           +K+S+   GS   ++K +IPQL G VWEACS+LKKTPATNI AIGR +TQVAVS+KDVLR
Sbjct: 119 LKESVSSYGSRNRDQKLSIPQLVGAVWEACSALKKTPATNITAIGRTMTQVAVSMKDVLR 178

Query: 61  EMKELEPCSSDPNSEAESQGQESNISDVDADD-----EFGKDLSPEEMKVAQLAVVIVSE 120
           EMKEL+P SSDP  E   +      S  + DD     + G DLSPEEMK+A   + +V+E
Sbjct: 179 EMKELKPASSDPTDETSDEASNKAESIPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTE 238

Query: 121 LVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSA 180
           ++ VIKELIR ITGL+K+E  N   + V+SLEKLLKLC+GIG+QVDELGACLYPPQE+ A
Sbjct: 239 ILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPA 298

Query: 181 ITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNS 240
           +  + +++S  +DE+  E++ L G+T+ F + CN L+++LG L   + DS  AD      
Sbjct: 299 MKAAAEKISGSVDEIQAEIENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTAD------ 358

Query: 241 SGLNVVEQMHNLAV 247
               +V +M NLAV
Sbjct: 359 ----LVPEMQNLAV 362

[Close]

BLAST of Spo20730.1 vs. NCBI nr
Match: gi|147819073|emb|CAN69812.1| (hypothetical protein VITISV_043108 [Vitis vinifera])

HSP 1 Score: 240.0 bits (611), Expect = 4.500e-60
Identity = 132/254 (51.97%), Postives = 175/254 (68.90%), Query Frame = 1


		  
Query: 1   MKDSIGPSGS---EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLR 60
           +K+S+   GS   ++K +IPQL G VWEACS LKKTPATNI AIGR +TQVAVS+KDVLR
Sbjct: 110 LKESVSSYGSRNRDQKLSIPQLVGAVWEACSXLKKTPATNITAIGRTMTQVAVSMKDVLR 169

Query: 61  EMKELEPCSSDPNSEAESQGQESNISDVDADD-----EFGKDLSPEEMKVAQLAVVIVSE 120
           EMKEL+P SSDP  E   +      S  + DD     + G DLSPEEMK+A   + +V+E
Sbjct: 170 EMKELKPASSDPTDETSDEASNKAESIPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTE 229

Query: 121 LVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSA 180
           ++ VIKELIR ITGL+K+E  N   + V+SLEKLLKLC+GIG+QVDELGACLYPPQE+ A
Sbjct: 230 ILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPA 289

Query: 181 ITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNS 240
           +  + +++S  +DE+  E++ L G+T+ F + CN L+++LG L   + DS  AD      
Sbjct: 290 MKAAAEKISGSVDEIQAEIENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTAD------ 349

Query: 241 SGLNVVEQMHNLAV 247
               +V +M NLAV
Sbjct: 350 ----LVPEMQNLAV 353

[Close]

BLAST of Spo20730.1 vs. NCBI nr
Match: gi|658008820|ref|XP_008339603.1| (PREDICTED: cyclin-D1-binding protein 1 homolog [Malus domestica])

HSP 1 Score: 230.7 bits (587), Expect = 2.700e-57
Identity = 128/236 (54.24%), Postives = 170/236 (72.03%), Query Frame = 1


		  
Query: 2   KDSI---GPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLRE 61
           K+SI   G    + K +IPQ  G VWEACS+LK TPATNI AIGRA+T+VAVS+KDVLRE
Sbjct: 121 KESISLYGARNKDGKLSIPQWVGAVWEACSALKMTPATNITAIGRAMTKVAVSVKDVLRE 180

Query: 62  MKELEPCSSDP--------NSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIV 121
           MKEL+P SSDP        ++EAE +  +  IS   +D + G DLSPEEM+V+QLA+ +V
Sbjct: 181 MKELKPASSDPTDGSSIEPSTEAEIEPDDDEIS---SDGDLGNDLSPEEMRVSQLAIAVV 240

Query: 122 SELVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQEL 181
           SE + VIKELIR+I+GLLK E  N   + V+SLEKLLK+C+ IGIQ+DELGACLYPPQE+
Sbjct: 241 SEALVVIKELIRTISGLLKLENPNGGSNLVDSLEKLLKMCKEIGIQIDELGACLYPPQEV 300

Query: 182 SAITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAAD 227
            AI  + +++S  +D++  EL  LNG+ +AFS+ CN LK++L  L+ E++     D
Sbjct: 301 PAIKAASEKISSFVDDMQSELQNLNGNLEAFSQACNCLKSSLRQLESEVASPNTVD 353

[Close]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2K3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114120 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.800e-127
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 1


		  
Query: 4   SIGPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE 63
           S GPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE
Sbjct: 125 SYGPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELE 184

Query: 64  PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS 123
           PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS
Sbjct: 185 PCSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRS 244

Query: 124 ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL 183
           ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL
Sbjct: 245 ITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDL 304

Query: 184 IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN 243
           IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN
Sbjct: 305 IDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHN 364

Query: 244 LAVND 249
           LAVND
Sbjct: 365 LAVND 369

[Close]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EYA2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g143090 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.500e-91
Identity = 189/244 (77.46%), Postives = 209/244 (85.66%), Query Frame = 1


		  
Query: 6   GPSGS-EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEP 65
           GP GS E++ TIP+LAGTVWEACS+LKKTPATNIVAIGRA+TQ+AVSIKDVLREMKELEP
Sbjct: 128 GPHGSSEQQTTIPRLAGTVWEACSALKKTPATNIVAIGRAMTQIAVSIKDVLREMKELEP 187

Query: 66  CSSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSI 125
           CSSDP  EAESQ  ESN  DVDADDEFGKDLSPEEMKVAQLA+ +VSE + VIKELIRSI
Sbjct: 188 CSSDPTGEAESQALESN--DVDADDEFGKDLSPEEMKVAQLAIGVVSEAIIVIKELIRSI 247

Query: 126 TGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLI 185
           TGLLKKE    E DGVESLEKLLKL R IG+QVDELGACLYPPQE SAI KSCKE+S+LI
Sbjct: 248 TGLLKKENLRDEQDGVESLEKLLKLFRSIGVQVDELGACLYPPQEFSAIAKSCKEMSNLI 307

Query: 186 DEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNSSGLNVVEQMHNL 245
           DEV KELD LNGST+AFS+ C +L  AL +L+IE S SVAADA+ QNSS  ++VEQM NL
Sbjct: 308 DEVGKELDSLNGSTEAFSKGCKSLHNALDMLQIETSASVAADAIPQNSS--DMVEQMQNL 367

Query: 246 AVND 249
           AV D
Sbjct: 368 AVQD 367

[Close]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Match: D7T8X3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04420 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.800e-60
Identity = 132/254 (51.97%), Postives = 176/254 (69.29%), Query Frame = 1


		  
Query: 1   MKDSIGPSGS---EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLR 60
           +K+S+   GS   ++K +IPQL G VWEACS+LKKTPATNI AIGR +TQVAVS+KDVLR
Sbjct: 119 LKESVSSYGSRNRDQKLSIPQLVGAVWEACSALKKTPATNITAIGRTMTQVAVSMKDVLR 178

Query: 61  EMKELEPCSSDPNSEAESQGQESNISDVDADD-----EFGKDLSPEEMKVAQLAVVIVSE 120
           EMKEL+P SSDP  E   +      S  + DD     + G DLSPEEMK+A   + +V+E
Sbjct: 179 EMKELKPASSDPTDETSDEASNKAESIPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTE 238

Query: 121 LVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSA 180
           ++ VIKELIR ITGL+K+E  N   + V+SLEKLLKLC+GIG+QVDELGACLYPPQE+ A
Sbjct: 239 ILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPA 298

Query: 181 ITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNS 240
           +  + +++S  +DE+  E++ L G+T+ F + CN L+++LG L   + DS  AD      
Sbjct: 299 MKAAAEKISGSVDEIQAEIENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTAD------ 358

Query: 241 SGLNVVEQMHNLAV 247
               +V +M NLAV
Sbjct: 359 ----LVPEMQNLAV 362

[Close]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Match: A5B8A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043108 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.200e-60
Identity = 132/254 (51.97%), Postives = 175/254 (68.90%), Query Frame = 1


		  
Query: 1   MKDSIGPSGS---EKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLR 60
           +K+S+   GS   ++K +IPQL G VWEACS LKKTPATNI AIGR +TQVAVS+KDVLR
Sbjct: 110 LKESVSSYGSRNRDQKLSIPQLVGAVWEACSXLKKTPATNITAIGRTMTQVAVSMKDVLR 169

Query: 61  EMKELEPCSSDPNSEAESQGQESNISDVDADD-----EFGKDLSPEEMKVAQLAVVIVSE 120
           EMKEL+P SSDP  E   +      S  + DD     + G DLSPEEMK+A   + +V+E
Sbjct: 170 EMKELKPASSDPTDETSDEASNKAESIPENDDNSSEGDLGNDLSPEEMKIAVSVISVVTE 229

Query: 121 LVTVIKELIRSITGLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSA 180
           ++ VIKELIR ITGL+K+E  N   + V+SLEKLLKLC+GIG+QVDELGACLYPPQE+ A
Sbjct: 230 ILAVIKELIRCITGLVKQEDANKSSNFVDSLEKLLKLCQGIGVQVDELGACLYPPQEIPA 289

Query: 181 ITKSCKELSDLIDEVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAVRQNS 240
           +  + +++S  +DE+  E++ L G+T+ F + CN L+++LG L   + DS  AD      
Sbjct: 290 MKAAAEKISGSVDEIQAEIENLGGTTETFIQACNVLRSSLGQLNSLVGDSSTAD------ 349

Query: 241 SGLNVVEQMHNLAV 247
               +V +M NLAV
Sbjct: 350 ----LVPEMQNLAV 353

[Close]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Match: W9RD38_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025856 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.400e-55
Identity = 120/220 (54.55%), Postives = 166/220 (75.45%), Query Frame = 1


		  
Query: 8   SGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEPCSS 67
           +G E + +IPQL G VWEACS+LKK P TN+ AIGR +TQVAVS+KDVLREMKEL+P S+
Sbjct: 129 TGKENESSIPQLVGAVWEACSALKKIPTTNVAAIGRVMTQVAVSMKDVLREMKELKPGST 188

Query: 68  DPNSE-AESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSITG 127
           D   E AES+ Q+    D   +D+ G DLSPEEMKVA+ A+V+VSE + ++KEL+RSITG
Sbjct: 189 DTTDENAESEAQDD---DGFNEDDLGSDLSPEEMKVARSAIVVVSEALVLVKELMRSITG 248

Query: 128 LLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLIDE 187
           LLK E+R+   D V+SLEKLLK C+GIG ++DELGA LYPPQE++ +  + +++S ++D+
Sbjct: 249 LLKLESRDDTGDFVDSLEKLLKHCQGIGTEIDELGASLYPPQEVAIMKGAVEKISSMVDD 308

Query: 188 VSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAAD 227
           + +E++ L G++DAF + C  LK++L  LK EI  S  +D
Sbjct: 309 MEREIESLKGTSDAFIQACGGLKSSLAQLKSEIDCSGPSD 345

[Close]

BLAST of Spo20730.1 vs. TAIR (Arabidopsis)
Match: AT1G22970.1 (unknown protein)

HSP 1 Score: 215.3 bits (547), Expect = 4.200e-56
Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 1


		  
Query: 6   GPSGSEKKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEPC 65
           G    +KK +IPQL+G VWEACSS KK PATNI AIGRAITQVAVS+KDVLREMKE++P 
Sbjct: 128 GSYEKDKKPSIPQLSGVVWEACSSFKKVPATNITAIGRAITQVAVSMKDVLREMKEVKPA 187

Query: 66  SSDPNSEAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSIT 125
              P SE E+ G   + SD D DD+ G DLSPEEM+VA +   IVSE + VIKELIR IT
Sbjct: 188 C--PLSECEASGDNMS-SDDDDDDDLGDDLSPEEMEVATMVTEIVSETIMVIKELIRVIT 247

Query: 126 GLLKKETRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLID 185
           G++K E        VESLEKLLKLC+G G+Q+DELGAC+YPPQE++ + ++ K +   +D
Sbjct: 248 GMIKMENPKDNSGFVESLEKLLKLCQGTGVQIDELGACVYPPQEMNKMKQTVKVIQGNLD 307

Query: 186 EVSKELDCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAV 229
           E   E++ L  S+D FS  C  L+ +L  ++ E+     A+ V
Sbjct: 308 EFETEVERLKSSSDGFSGACGKLRNSLKHMETELDKRCEAELV 347

[Close]

BLAST of Spo20730.1 vs. TAIR (Arabidopsis)
Match: AT1G71150.1 (unknown protein)

HSP 1 Score: 191.4 bits (485), Expect = 6.500e-49
Identity = 105/218 (48.17%), Postives = 145/218 (66.51%), Query Frame = 1


		  
Query: 12  KKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEPCSSDPNS 71
           +K TIPQLAG VWEACS+LK  P TNI AIGRA+  VAVS+KDVLREMKEL+P SS P  
Sbjct: 135 RKPTIPQLAGAVWEACSNLKNVPETNIKAIGRAMAHVAVSMKDVLREMKELKPASSSP-- 194

Query: 72  EAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSITGLLKKE 131
                  + N+S    DD+ G +LSPEE +VA++   IVSE + VIKELIR+IT ++K E
Sbjct: 195 -------DHNVSTNSDDDDLGDELSPEEFEVAKMVADIVSETLVVIKELIRAITCMIKLE 254

Query: 132 TRNHEHDGVESLEKLLKLCRGIGIQVDELGACLYPPQELSAITKSCKELSDLIDEVSKEL 191
                 + V+S EKLLKLC+GIG+Q+DELGAC+YPPQE   + ++ + + + I E+  ++
Sbjct: 255 NPKDNSEFVDSFEKLLKLCQGIGVQIDELGACVYPPQEFGLMKQTVENMRESIGEIESDV 314

Query: 192 -DCLNGSTDAFSERCNTLKTALGVLKIEISDSVAADAV 229
               N S++A S  C  L++ +  +  E+   + A+ V
Sbjct: 315 KSSKNSSSEALSGSCRRLQSLIEHMVTELDTRIEAEVV 343

[Close]

BLAST of Spo20730.1 vs. TAIR (Arabidopsis)
Match: AT1G22980.1 (unknown protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.100e-35
Identity = 88/207 (42.51%), Postives = 133/207 (64.25%), Query Frame = 1


		  
Query: 12  KKCTIPQLAGTVWEACSSLKKTPATNIVAIGRAITQVAVSIKDVLREMKELEPCSSDPNS 71
           +K +I QL+G V EACSS KK P TN++AIG AI+QV+V +KDVL EMK+++P    P+S
Sbjct: 134 EKPSISQLSGAVLEACSSFKKVPTTNLIAIGSAISQVSVIMKDVLNEMKKVKPAC--PSS 193

Query: 72  EAESQGQESNISDVDADDEFGKDLSPEEMKVAQLAVVIVSELVTVIKELIRSITGLLKKE 131
           E E+ G                D SPE+++VA++   IV E +TVI  +IR IT +++KE
Sbjct: 194 EGEASGD---------------DFSPEQIEVAKMVADIVYEAMTVI-IVIRVITRMMEKE 253

Query: 132 TRNHEHDGVESLEKLLKLCRGIGIQVDELGACLY-PPQELSAITKSCKELSDLIDEVSKE 191
             N     VESLEKLLKLC+  G+ ++ELG C+Y PP ++  IT++ K L   +DEV  +
Sbjct: 254 NSNENSVFVESLEKLLKLCQRSGVVIEELGTCVYHPPLKIDKITQTVKILEGNLDEVEAQ 313

Query: 192 LDCLNGSTDAFSERCNTLKTALGVLKI 218
           ++ +  S++AF   C  L+ A+ ++++
Sbjct: 314 VEYMKRSSNAFPGVCRKLRDAIKLMEV 322

The following BLAST results are available for this feature:

BLAST of Spo20730.1 vs. NCBI nr
BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
BLAST of Spo20730.1 vs. ExPASy Swiss-Prot
BLAST of Spo20730.1 vs. TAIR (Arabidopsis)

BLAST of Spo20730.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198656\|gb\|KNA13735.1\|	2.5e-127	99.5	hypothetical protein SOVF_1141...	[more]
gi\|731341033\|ref\|XP_010681711.1\|	6.5e-91	77.4	PREDICTED: uncharacterized pro...	[more]
gi\|225424128\|ref\|XP_002280178.1\|	2.7e-60	51.9	PREDICTED: uncharacterized pro...	[more]
gi\|147819073\|emb\|CAN69812.1\|	4.5e-60	51.9	hypothetical protein VITISV_04...	[more]
gi\|658008820\|ref\|XP_008339603.1\|	2.7e-57	54.2	PREDICTED: cyclin-D1-binding p...	[more]

BLAST of Spo20730.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2K3_SPIOL	1.8e-127	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8EYA2_BETVU	4.5e-91	77.4	Uncharacterized protein OS=Bet...	[more]
D7T8X3_VITVI	1.8e-60	51.9	Putative uncharacterized prote...	[more]
A5B8A1_VITVI	3.2e-60	51.9	Putative uncharacterized prote...	[more]
W9RD38_9ROSA	1.4e-55	54.5	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo20730.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo20730.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G22970.1	4.2e-56	53.8	unknown protein	[more]
AT1G71150.1	6.5e-49	48.1	unknown protein	[more]
AT1G22980.1	3.1e-35	42.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026907	Cyclin-D1-binding protein 1	PANTHER	PTHR15492	FAMILY NOT NAMED	coord: 15..229 score: 3.8
None	No IPR available	unknown	Coil	Coil	coord: 177..197 scor
None	No IPR available	PANTHER	PTHR15492:SF1	CYCLIN-D1-BINDING PROTEIN 1	coord: 15..229 score: 3.8
None	No IPR available	PFAM	PF13324	GCIP	coord: 7..187 score: 9.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051726	regulation of cell cycle