Spo20133.1 (mRNA) | SpinachBase

Overview


Name	Spo20133.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Splicing factor SF2-like protein
Location	SpoScf_02312 : 53159 .. 60313 (+)
Sequence length	1363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTTTTCAGGTAGTCCACCTGCTGTTTTCTTTTCTAATAAAAAAAAAAAACAAACGCTCTCACTAATGAGATCTCGACAAAATGGTTAAAAGTCTCAGCTTCAAAACCCCTCCACAAAAGCCGCTCTCAAGATGGTGGCGCGTGGATGAAAGCTTTAAGATCCCCAAAGATCAAACGTATGGTACACAATAAAAGCGTAGAGCAGTGAAGCACCGAACCAAGTCTCTACATTTTTGTCACATACTCCGTATTAATATAACCCTACTTTCTCTCTCCTCTCGAAACTACTTTCCAGAGACTTCCAATTTCTAATTTTTCACGGTACGCTCTACACGTCTTCTTCTCGTTTTTCCTGTTTTTCAATCTCCTCATTCTTTCGTGCTCAAAACTATAATTTCAACTTCGATATATTTTTTTTCCGATTATTTTTTTAAAAATTGATTAGTGATTCAGTTAACTCTTTCATCGTACTAGTAGTTTAGTTCGGTAATTTCTCTTCTGATTTATTGTCGGATGTTTGATTAACAATATTTGTAATTTGATTCCTCTGTTTCTTATCTTGGTTGCAGAAAAGTTAGGTTTTTTTTAATATCGTTGATTAGAATTAATCGGATTCTATGTCATATTTTGATTTGATTTTGTGATTTGTTTCTTGTACCTTGATTTCTATTTGATATATCATAATTTTCAATTTTTGGTGGTTAATTTTAATTTTTCAATTTTATTTGTTTATTGTAATTGGCTGAATTATGCAAATTTTTTATGTTTGAATTGATCTTTCTGAATGTGGATTGCCCAATTTATTACCCTTAAACCTAATAACATTAATTAGAATTACTGAGAACTAGTTTTCGACAAGAGCTTAGCTCCGAATATTGATACAAATGTATTCTTGGTTTTATTTTTGTTGGATTAACTTCCAGTTTTCGAATTTAAAATCGTAATAGGTAATTCGATTTTCGAACAATTAGTTTATTAAAAAATAAATTCTTTGAAGTTCTTTTAAATTTTGGTTTAAAGGATTTATTTCCCCGAAATGTAGTTTTTGTGGGAAAAAATTTCTCAGGATTCTGTCAAGTGTTCATTGCGGTTATAACATTAGTAGTATGTGTATAGAGGACTAGTGTTTTTTTTTCCTTCTTCCATGTCCCCTCTTGGAACTTTGCAATAGTTGACTGTATTTTTGTTGTGCAGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGGTTGGTCTTTATAATGTATTATGTGGTTCCTTTGTGGCGATTCCAGCCCGAACTGACAATGTAGTATTTTGTATGAGTGTTGGTCAATTTTGTTATGTGAATTGCTCTAGGTTTTGATAATGGTACCTGAAATGAAATATAATCTCTTACAAATTGAGAACTTCTTGCCCTTCATGTTAGACTTGAATACTTTATGATTTAGTTTCTTTGAGCTTGAGGATTGGGGATATGTATGACTTTATATACATGTGAAGTCCGTAGAAAAAAAAAAAATCCGTGCAGTAGGTTCATAATGCTTTGAGTACAATTTCAATAAGGAATGGCTGAATGATGATCCTACCTTTGCCAAAATAAAATAGAGAAGATTTGGGACCTTGCATCTCAATCAAGAAATTTTCAACATGAGAGACAAATTTATAGACTTATAGTGTGTACGCGGGTGTTTTTTTGGGTAGGTAGGGTTTGTTTGTGTTGGAGGGGGGGGGGGGAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGAATTACCTGTGTTAAGTTATTGTTCTTAGCATTAAAACATACCTGTTAGTGGCAGACCACCTCAGTATATAGAGTCTAGTTTGTGGTTCTTTATCAGACCTTCAATGATATAACTATTTTCTGGTAGCTGAGTAAAATAAGCTTCATCAGTGCCGCTAATTCTTTATGCTCTGATGCAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGGTGAGGACAATTATGAAAAGAAGATAAACATCTAGGATTAGATTGATGAATTGTTTGTGTAACTCATAGCTTCTTTCTCTAATTTGTTGGATTGTTATTGTTTATTTTTAACCATATTTTACAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTAGGTATTCTTGGAACCTTGTTTCTGCTGCCTGTCTACATGTGCTTCTTTTTCTGGCTGATGAGACTTGCATCACTTACATTGGTGTTTTAAACTTCAGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGGTTAGTCTTGCTTTGCTAGTGACATCTTTTTGGTTATTTCACAGCTATGCAAAATTCTTATATTGGTGTTTCTGCAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGTCAGTGTTAACAGTCTTTTTAAACTAGAGGGAATTTGGGGATCATTGTGCTGTGCAGTTTGTGTCTCGCATGAGTTCGATGTTCCCATTCCCATTATATTTTTTCTATCTATTATTCATGTTGTTTTATTGATTTGTGTATTGTATCATAATCAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGTAAGTTGGCGCTTATGATGATCCTTGAGTTTCTTCTTACCTAGTGTTTCTTTCATTAGTGGCAGTGATTGATTGTTCAATATGTGGTTTGGCTATGTGTGTGATTTTTATTAATTTTTTCATATTGTTCTGTAAGTCTAGGTAGCAACTGTAAAGTTAAATCGACTTAAAAACTCTTTAGCATTTTGTGTTAGGTTTTGACATTTTCCTAGTATTATCTGGAATGCATCACGGTACTCAAGTTCCACAATGATAACTGCCTTTACTGGGTATATCCATCTTTCTACCCGTCCGATAAAGTCCCATAGTCCTTATGCAAGCTAGCATGTGACAGATGCTGACGACCATGCATATTGGAGATGAGCTAACTATCTTGCGGCATTAAGTTGATTCAAGCCTAAGTCTTGAAATTTGGACCAGAAAATCTGAAAGTTCACATTTTTTTTGAACTTATGTTGGTTGTCTAATATGTGGTGTAGGCCTTTAGGGTCATCCTCAAAAGTTGAGATGTTTTGTTCACTGCATACTTCTAGTTGTACAGTTGTGCCTTTTGACCTGATAAAGCGTTCTTTTTGCAGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTAAGATGTTTTGTTCTGTTTGTTGTTTAGTGGTAATTTTGTTTAGTGCCTTTTTTCCTTGTAGATTATGAGGCGTTCCCTTTTATGCAGGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTACGTCTCAAAAAAAATTGATTCTCAAATTGAGCATTTACTGTTTTCTTATAGTTTTTCACATTAATTTTACATCTCCAGGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGGTGCTGTTATTTGTTTTAAGATGGATTTTGTGCTAAGGTTTTATGATAATGAAACTATGCTGAAAAGTCTCCTTTGATGCAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGGTATGCTGTTGCTCCTGTTACTCTTGCTCATCAATCACCTTAAGGAAGTATAATGACTAATCATATATGGTTAACAAGATTGCATAATATTGCGTCATATATCTGGTTCATTTCCGTAAACTGCTTAGCTTATACCAACATCTGGTTATAGTTCATCAACGAAGCTAGGTTGTATATGTCTAGCTTCTATTGGCCATCCAGATTCATGTGGCTGCATTATTATGTATTTACGAAGTATCCCTGATTTAACCTCGGTTGAAGGATACATATGTTGTATGATTTAGCTTCTAGTGATGAGCCAGACGTACCAGTCATTTTACACTAATTGCCCCTGATTTGACCTTGGTTAAACATGTAATGTAATTTATTTTTTCCTGATATGCGGAGTAAGATCGTCCTATTATTTCCGGGAGTACAACAGCCGATTAACAGGAATACAGTAGGCCTTCTTACTTGTTTCTGTGTGAAAGATGTTAAGAGGGTATAATACCAGACAGCCAGTTACAGACTTACAGATAATGGAATAAACTAGACTGGAGCAGCAATTAAACCGTATGCACCTGTATATTAAAAGTGTTGGTCGTATTTTTTGGTCTTGGGTGCTGCAAGAGTGGATCGTCGAGAATACGTGGATCTTTTTACGAAGCCTTAGAGGAAGGGAGAAGTCAGAAAACCATTATTTAGCAATTCTTGCTAGATTGTTCCTATTTTTTGAAACCTCTTCCGAGGCTTCCCTCTTCATTTTGTCTATTTATGCTCACATTTTGTCCGACTTTATTTGGTAAATTTCCCTGTTCACATTTTTCTTCAAGCAACTGCATAATGGGTGCTTCTGGAGTGGAATATGGAAGATTATGTAGATTAGTTTTAAAGACTATAGAAGAATGATCGACCATTTTTATTGCCTTTTTTTTATCACTTGACTTCTGCATGGAATCAGTTTGCTTCCTCTTGTCTTTCCCCTTCTCGGATTATCTTCGTCCATTTTCAAAGCATGCCTGTTAGATGCGTTTATTTGCAGTTGGGTGGCTCTGTTGTAGTTTGGAGTCTGGTAGTTAAAGCGTTGACCTGTTAATGTTACCAATGGTTGCATTTCTTCTGTCAATAAGTAGAAAAGGCATAGGGAAGTGCCAAGTTACTTTTTGATGTCTTAACTTATTTTGTAGTGTAATACTATAATTGGTGAGAAAAGAGGGGTTATTGGAGACATGAAGGTAGTTCATTTGTATATGCCATACCAAACTATAAGCTGTGTCTGACACTTGGATGCATAGAGAGGGAGGAGGTTAGATGCTTAAAAACTTCATATTTGGGCAAAAATTAGGTAAAATTTAGACATTTCATATAAGATGCGTATCTGTCTCTGACACTTCTAGCTGCATTCGAGTAACATAGACGTGGCATGCATGTGCTACCGTATCTAATCACATTGTGCTTTCCCACTTCAGATCTGTTGAATTTGGAACTTAATTAAAAACAAAAACTTAGCCTCTTAATTCACGTTAGTTAGTGCAGAGTTCCCAAAATAAAAGCGTGTATTTCTAGGGATAAGTTGTAACTTGTAAGTGATCATATGGGGAAATCAGATAAATTTTCCCATATTAGATATATCAGGAATTAACCATGCCTTTTGATGGTTTTTGAGACACGATCGATCATATTTGAAACAGATGAGTGTTGCCAAATTGTTTTAACATGTTTATGAAGGCTGTCTTCTTTGTTTCTTTAATCCAGCTCTTTGCGGCAGTCTGGGGATTGGACAAAGGGGGCTTGGATCTCTTTGCACGTCAAACATGCTCATTTCCATCCAAGGTGGACAAATTTTAGTAAATATAACAAGACCCAGGCTGGTATTTTGTTATTTTTTGGACATGTTTAATATTGGGAAGCATGTCTGGATATGTGTTTAAGGTATAATATTTGGCGGAGGTTCTTGGGTGTTAGCTGACGGAATCTTTGGTTCAATAAGAAAGAGCCGGATTCTTCTCGTAACTCATAAGTGCTCTAGTGTCTTGGAACACAAAGCATATCATAGCCAAATTGCAAACTTAAAGGATATTGGTAGATACATTGTTCAGTGCATTTTAAGTGCGAAACTTGGTTTTGGGACTTGTTGCTTCTCTCGTTGGTGAACATGAGATTCCACTACGAGCTGACTTGATGGTAAGGTTGGGATTTCTTGCTCTGGTCCAAAATAGCTCTCCCCTCACTCCCCCTTCTGGTGTTTTCACTTATAATTTTGAGTGTGAAGGTCCAAAATCATCCTGTTGAATGCTTGTCAGAATGAATCATCATGACTATTTGGTAGAGCAGTCAATCCCTCAACACTGACTTTGGATTGTTTTGCTCTATTTTGTTTACAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGTATGATACTTTTGTTGATGTTCCATATTAGTCTCTACTTGTGTTGTTTGTGTTTTTTAGTTCACTGAACAAACAATATGTTATGTGTATTGCAGGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGAGTGAAGGAGATTATTGCCGGACAAACTAGTGGATGTCGTGTTACATTAAGTGTTATGTGGTAGGCGTATAATTGACGTAGATTTTCTCAGTTTAAGCTGATAATTCGGACCTCTGATTAGATATTGGTGTATTTATAATGCTGGCCGATTGTCCTTGATAATTTTCATAAATTTGTCTTTTGAGGACTAGAGTGAAAGCGGGTTCACGTATGAACTCAAAGTAGCGAATCTTTCATAGCTGCGCTGTGTAATTTGGGATCTGAATTTTATTGTTTTAGGGTTCTAGACTTCTAGTGTAATGTGACAATGAACTTTGAGGTTTAGCTTTCCTAGTAAAGAGCTCATAAGTGATATTCTCCGTAGTATGATTCATAGTATCTGAAATTATGCGTGGTTTTCAATTTTGAATAATGTTTTTTTTTTGTGCATTTTAGCTTTTAGA

mRNA sequence

ATGATGCTTTTTCAGTTTAGTTCGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGAGTGAAGGAGATTATTGCCGGACAAACTAGTGGATGTCGTGTTACATTAAGTGTTATGTGGTAGGCGTATAATTGACGTAGATTTTCTCAGTTTAAGCTGATAATTCGGACCTCTGATTAGATATTGGTGTATTTATAATGCTGGCCGATTGTCCTTGATAATTTTCATAAATTTGTCTTTTGAGGACTAGAGTGAAAGCGGGTTCACGTATGAACTCAAAGTAGCGAATCTTTCATAGCTGCGCTGTGTAATTTGGGATCTGAATTTTATTGTTTTAGGGTTCTAGACTTCTAGTGTAATGTGACAATGAACTTTGAGGTTTAGCTTTCCTAGTAAAGAGCTCATAAGTGATATTCTCCGTAGTATGATTCATAGTATCTGAAATTATGCGTGGTTTTCAATTTTGAATAATGTTTTTTTTTTGTGCATTTTAGCTTTTAGA

Coding sequence (CDS)

ATGATGCTTTTTCAGTTTAGTTCGCTTTTCTCAAGGTTGAAGACAGCTATGACGAAACGCATTTATCGTACTATTTATGTTGGAAATCTTCCCGGTGATATTCGGGAGAGAGAGGTGGAGGATATTTTTTACAAGTATGGCCCAATCGTTGAAATTGATTTGAAGGTTCCGCCAAGGCCTCCAGGTTATGCTTTTGTTGAGTTTGAAGATGAACGAGATGCTGAAGATGCTGTGCATGGCCGAAATGGTTATGATTTTGATGGGCATCGTCTACGGGTGGAATTCGCTCATGGTGGACGAGGTTCATCATCATCAGACCATCGCAGCAGTTACAGTGGTAGTAGTTATAGAGGGGGAGCACCCAAGCACACTGACTACAGAGTTATGGTCACTGGACTGCCATCATCTGCTTCTTGGCAAGACCTGAAGGATCACATGCGACGAGCTGGAGAAGTTTGTTTTTCAGATGTATTCAAGGATCGTCGTTATGGTGGCATGGCTGGAGTTGTCGAATATGCAAGTTATGATGATATGAAACGTGCTGTCAGGAAGCTGGATGATTCTGAATTTCGTAATGCATTCTCTCGCGCTTATATCCGAGTGAAGGAGGACTCGAGGAGTCTGAGTCCAGATGATAGGTCGAGAAGCAGAAGCAGAAGCTACAGCCGTGGCCGTAGTTATAGTCGAAGCCGCAGCCGCAGCCGCAGCCACAGTATATCTCCGCGAAGAAACTCACGCCGTTCTTATTCTAGATCTCCTTCGAAGTCCCGCTCGAGATCTCCCTCTCGTTCTCGCTCTAGATCCTTATCAAGATCCAGGTCCCCAGTTCGTCGCAGAGTTAGCAGGAGTGCTAGTCGATCACTTTCACCAGCTGCTCGATCTGATAGGAGTCAATCTGTGAAGTCTGAGGAGCGTTGCTGA

Protein sequence

MMLFQFSSLFSRLKTAMTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSRAYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQSVKSEERC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20133	Spo20133	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20133.1	Spo20133.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20133.1.exon.1	Spo20133.1.exon.1	exon
Spo20133.1.exon.2	Spo20133.1.exon.2	exon
Spo20133.1.exon.3	Spo20133.1.exon.3	exon
Spo20133.1.exon.4	Spo20133.1.exon.4	exon
Spo20133.1.exon.5	Spo20133.1.exon.5	exon
Spo20133.1.exon.6	Spo20133.1.exon.6	exon
Spo20133.1.exon.7	Spo20133.1.exon.7	exon
Spo20133.1.exon.8	Spo20133.1.exon.8	exon
Spo20133.1.exon.9	Spo20133.1.exon.9	exon
Spo20133.1.exon.10	Spo20133.1.exon.10	exon
Spo20133.1.exon.11	Spo20133.1.exon.11	exon
Spo20133.1.exon.12	Spo20133.1.exon.12	exon
Spo20133.1.exon.13	Spo20133.1.exon.13	exon
Spo20133.1.exon.14	Spo20133.1.exon.14	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20133.1.CDS.1	Spo20133.1.CDS.1	CDS
Spo20133.1.CDS.2	Spo20133.1.CDS.2	CDS
Spo20133.1.CDS.3	Spo20133.1.CDS.3	CDS
Spo20133.1.CDS.4	Spo20133.1.CDS.4	CDS
Spo20133.1.CDS.5	Spo20133.1.CDS.5	CDS
Spo20133.1.CDS.6	Spo20133.1.CDS.6	CDS
Spo20133.1.CDS.7	Spo20133.1.CDS.7	CDS
Spo20133.1.CDS.8	Spo20133.1.CDS.8	CDS
Spo20133.1.CDS.9	Spo20133.1.CDS.9	CDS
Spo20133.1.CDS.10	Spo20133.1.CDS.10	CDS
Spo20133.1.CDS.11	Spo20133.1.CDS.11	CDS
Spo20133.1.CDS.12	Spo20133.1.CDS.12	CDS
Spo20133.1.CDS.13	Spo20133.1.CDS.13	CDS
Spo20133.1.CDS.14	Spo20133.1.CDS.14	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20133.1.utr3p.1	Spo20133.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206684|gb|KNA15537.1| (hypothetical protein SOVF_097130 isoform B [Spinacia oleracea])

HSP 1 Score: 505.0 bits (1299), Expect = 9.300e-140
Identity = 284/318 (89.31%), Postives = 285/318 (89.62%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 307
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRSRSLSRSRSPVRRRVSRSASRSL
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 300

[Close]

BLAST of Spo20133.1 vs. NCBI nr
Match: gi|731326518|ref|XP_010674059.1| (PREDICTED: serine/arginine-rich splicing factor SR30 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 448.0 bits (1151), Expect = 1.400e-122
Identity = 252/291 (86.60%), Postives = 266/291 (91.41%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS--RSPVRRRVSRSASRSLSPAARSDRSQSVKSEER 306
            SRS SRSRS S SRS  R  +RR VSRSAS+S SP ARSDRS+SV SEER
Sbjct: 241 PSRSRSRSRSPSSSRSPVRRVIRRSVSRSASQSRSPVARSDRSRSVNSEER 285

[Close]

BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206685|gb|KNA15538.1| (hypothetical protein SOVF_097130 isoform C [Spinacia oleracea])

HSP 1 Score: 446.0 bits (1146), Expect = 5.100e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282

[Close]

BLAST of Spo20133.1 vs. NCBI nr
Match: gi|902206683|gb|KNA15536.1| (hypothetical protein SOVF_097130 isoform A [Spinacia oleracea])

HSP 1 Score: 446.0 bits (1146), Expect = 5.100e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282

[Close]

BLAST of Spo20133.1 vs. NCBI nr
Match: gi|731326522|ref|XP_010674061.1| (PREDICTED: serine/arginine-rich splicing factor SR30 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 419.5 bits (1077), Expect = 5.100e-114
Identity = 227/256 (88.67%), Postives = 239/256 (93.36%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS 273
            SRS SRSRS SL +S
Sbjct: 241 PSRSRSRSRSSSLRQS 250

[Close]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9T7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.500e-140
Identity = 284/318 (89.31%), Postives = 285/318 (89.62%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 307
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRSRSLSRSRSPVRRRVSRSASRSL
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSRSLSRSRSPVRRRVSRSASRSL 300

[Close]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g075880 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 9.400e-123
Identity = 252/291 (86.60%), Postives = 266/291 (91.41%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MT+RIYRTIYVGNLPGDIREREVEDIFYKYGPIV+IDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGR  SSSD  SSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRAYSSSDRHSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGM+GVV+YA+Y+DMKRA+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMSGVVDYANYEDMKRAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           A+IRVKE SRS SPDDRSRSRS  YSRGRSYSRSRS    +SISPRRNSRRSYSRS ++S
Sbjct: 181 AFIRVKEYSRSPSPDDRSRSRS--YSRGRSYSRSRS----YSISPRRNSRRSYSRSLTRS 240

Query: 257 RSRSPSRSRSRSLSRS--RSPVRRRVSRSASRSLSPAARSDRSQSVKSEER 306
            SRS SRSRS S SRS  R  +RR VSRSAS+S SP ARSDRS+SV SEER
Sbjct: 241 PSRSRSRSRSPSSSRSPVRRVIRRSVSRSASQSRSPVARSDRSRSVNSEER 285

[Close]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7N0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.600e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282

[Close]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7R2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097130 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.600e-122
Identity = 247/284 (86.97%), Postives = 249/284 (87.68%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED
Sbjct: 1   MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS
Sbjct: 61  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDR----------------------------SRSRSRSYSRGRSYS 256
           AYIRVKEDSRSLSPDDR                             RSRSRSY+RG SY 
Sbjct: 181 AYIRVKEDSRSLSPDDRKLDDSEFRNAFSRAYIRVREDSRSLSLDDRSRSRSYNRGCSY- 240

Query: 257 RSRSRSRSHSISPRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRS 273
            SRSRSRSHSISPRRNSRRSYSRSPSKS SRSPSRSRS SL +S
Sbjct: 241 -SRSRSRSHSISPRRNSRRSYSRSPSKSGSRSPSRSRSSSLRQS 282

[Close]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QW99_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134010 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.700e-90
Identity = 201/297 (67.68%), Postives = 240/297 (80.81%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+FYKYGPI  IDLK+PPRPPGYAFVEFE+ R A+D
Sbjct: 1   MSSRSRRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARHAQD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A+ GR+GYDFDGHRLRVE AHGGRG+SSS  R S S S  R G  KHT+YRV+++GLPSS
Sbjct: 61  AIDGRDGYDFDGHRLRVELAHGGRGNSSSTDRYS-SQSGGRRGVSKHTEYRVVISGLPSS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS VF+D   GG  G+V+Y +Y+DMK A+RKLDDSEFRNAFSR
Sbjct: 121 ASWQDLKDHMRKAGDVCFSQVFRDG--GGTTGIVDYTNYEDMKNAIRKLDDSEFRNAFSR 180

Query: 197 AYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSKS 256
           +Y+RVKE   S SP  +SRSRSRS SRGRSYSRSRS S+    SP++ SRRS +RSPS+S
Sbjct: 181 SYVRVKEYKGSRSPRGKSRSRSRSRSRGRSYSRSRSPSK----SPKKASRRSPARSPSRS 240

Query: 257 RSRSPSRSRSRSL----SRSRSPV---RRRVSRSASRSLSPAARSDRSQSV-KSEER 306
           RSRSPSRSRSRSL    SRSRSPV   ++ +S+S  + +SP+ R +RS+S+ KS  R
Sbjct: 241 RSRSPSRSRSRSLSRSRSRSRSPVPAQKKNLSKSPKKVVSPSPRRNRSKSLSKSPSR 290

[Close]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34_ARATH (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana GN=SR34 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.300e-80
Identity = 188/297 (63.30%), Postives = 221/297 (74.41%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+F KYGP+V+IDLKVPPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGA----------PKHTDY 136
           A+HGR+GYDFDGHRLRVE AHGGR  SS D R S++G    GG            + +++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 137 RVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLD 196
           RV+VTGLPSSASWQDLKDHMR+ G+VCFS V++D R  G  GVV+Y  Y+DMK A++KLD
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR--GTTGVVDYTCYEDMKYALKKLD 180

Query: 197 DSEFRNAFSRAYIRVKE-DSR--SLSPD-DRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           D+EFRNAFS  Y+RV+E DSR  S SP   RS S+SRS SRGRS SRSRSRSRS S SP+
Sbjct: 181 DTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPK 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQS 300
             S R   RSP+KS SRSP     RS SRS SP   R SRS SRS  P+ + + S+S
Sbjct: 241 AKSSR---RSPAKSTSRSPG---PRSKSRSPSP---RRSRSRSRSPLPSVQKEGSKS 285

[Close]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR30_ARATH (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana GN=SR30 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.100e-76
Identity = 181/271 (66.79%), Postives = 212/271 (78.23%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIR+ EVED+FYKYGPIV+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A++GR+GYDFDG RLRVE AHGGR  S S  R S S S+ R  + + +DYRV+VTGLP S
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPS-RRSDYRVLVTGLPPS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS+VF DR+  GM+GVV+Y++YDDMK A+RKLD +EFRNAFS 
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRK--GMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS 180

Query: 197 AYIRVKE-DSRSLS--PDDRSRSRSRSYSRGRSYS---RSRSRSRSHSISPRRNSRRSYS 256
           AYIRV+E +SRS+S  PDD    RSRS SRG S S   +SRS S + SISPR     S S
Sbjct: 181 AYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPL-SRS 240

Query: 257 RSPSKSRSRSPSRSRSRSLSRSRSPVRRRVS 282
           RS   S SRS SRS+SRS SRS SPV   +S
Sbjct: 241 RSLYSSVSRSQSRSKSRSRSRSNSPVSPVIS 267

[Close]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34B_ARATH (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana GN=SR34B PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.500e-76
Identity = 181/273 (66.30%), Postives = 206/273 (75.46%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIREREVED+F KYGP+V+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRG-----------GAPKHTD 136
           A++GR+GYDFDGH LRVE AHGGR  SS D R SYSG    G           G  + ++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 120

Query: 137 YRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKL 196
           YRV+V+GLPSSASWQDLKDHMR+ GEVCFS VF+D R  G  G+V+Y SY+DMK A   L
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR--GTTGIVDYTSYEDMKYA---L 180

Query: 197 DDSEFRNAFSRAYIRVKE-DSR--SLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           DD+EFRNAFS  Y+RV+E DSR  S SP  R RS S+S SRGRS SRSRSRSRS S S R
Sbjct: 181 DDTEFRNAFSHEYVRVREYDSRRDSRSP-SRGRSYSKSRSRGRSPSRSRSRSRSRSKS-R 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSP 276
               +S  RSP+KS SRSP RSRSRS SRS SP
Sbjct: 241 SPKAKSLRRSPAKSTSRSP-RSRSRSKSRSLSP 264

[Close]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SR34A_ARATH (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana GN=SR34A PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.800e-74
Identity = 175/294 (59.52%), Postives = 211/294 (71.77%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  R+IYVGNLPGDIRE E+EDIFYKYG IV+I+LKVPPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGS------------SYRGGAPKHT 136
           A+ GR+GY+ DG RLRVE AHGGRG SSSD R  Y G             S R G  +H+
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 137 DYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRK 196
           ++RV+V GLPSSASWQDLKDHMR+AG+VCF++V +D    G  GVV+Y +YDDMK A+RK
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDS--DGTYGVVDYTNYDDMKYAIRK 180

Query: 197 LDDSEFRNAFSRAYIRVKE----DSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSIS 256
           LDD+EFRN ++R +IRVK+     SRS SP   SRSRSRS SR RS  R RS SRS S+S
Sbjct: 181 LDDTEFRNPWARGFIRVKKYESSRSRSRSP---SRSRSRSRSRSRSRGRGRSHSRSRSLS 240

Query: 257 PRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVR---RRVSRSASRSLSPA 292
             ++ R+  S+SP +S SRS S+SRS S  + +SP R   R  SRS SRS SP+
Sbjct: 241 RSKSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPS 289

[Close]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Match: SRSF1_BOVIN (Serine/arginine-rich splicing factor 1 OS=Bos taurus GN=SRSF1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.300e-52
Identity = 136/245 (55.51%), Postives = 163/245 (66.53%), Query Frame = 1


		  
Query: 25  IYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGY 84
           IYVGNLP DIR +++ED+FYKYG I +IDLK     P +AFVEFED RDAEDAV+GR+GY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 85  DFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAP--------KHTDYRVMVTGLPSS 144
           D+DG+RLRVEF   GRG+          G    GGAP        + ++ RV+V+GLP S
Sbjct: 78  DYDGYRLRVEFPRSGRGTGRG------GGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPS 137

Query: 145 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFR-NAFS 204
            SWQDLKDHMR AG+VC++DV++D       GVVE+   +DM  AVRKLD+++FR +   
Sbjct: 138 GSWQDLKDHMREAGDVCYADVYRDG-----TGVVEFVRKEDMTYAVRKLDNTKFRSHEGE 197

Query: 205 RAYIRVKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPRRNSRRSYSRSPSK 261
            AYIRVK D     P   S  RSRS SR RS SRSRS SRS S SPRR SR S   SP  
Sbjct: 198 TAYIRVKVD----GPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRR-SRGSPRYSPRH 246

[Close]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 298.9 bits (764), Expect = 3.600e-81
Identity = 188/297 (63.30%), Postives = 221/297 (74.41%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RT+YVGNLPGDIREREVED+F KYGP+V+IDLKVPPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGA----------PKHTDY 136
           A+HGR+GYDFDGHRLRVE AHGGR  SS D R S++G    GG            + +++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 137 RVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLD 196
           RV+VTGLPSSASWQDLKDHMR+ G+VCFS V++D R  G  GVV+Y  Y+DMK A++KLD
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDAR--GTTGVVDYTCYEDMKYALKKLD 180

Query: 197 DSEFRNAFSRAYIRVKE-DSR--SLSPD-DRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           D+EFRNAFS  Y+RV+E DSR  S SP   RS S+SRS SRGRS SRSRSRSRS S SP+
Sbjct: 181 DTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPK 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVRRRVSRSASRSLSPAARSDRSQS 300
             S R   RSP+KS SRSP     RS SRS SP   R SRS SRS  P+ + + S+S
Sbjct: 241 AKSSR---RSPAKSTSRSPG---PRSKSRSPSP---RRSRSRSRSPLPSVQKEGSKS 285

[Close]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT1G09140.1 (SERINE-ARGININE PROTEIN 30)

HSP 1 Score: 288.1 bits (736), Expect = 6.300e-78
Identity = 181/271 (66.79%), Postives = 212/271 (78.23%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIR+ EVED+FYKYGPIV+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRGGAPKHTDYRVMVTGLPSS 136
           A++GR+GYDFDG RLRVE AHGGR  S S  R S S S+ R  + + +DYRV+VTGLP S
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPS-RRSDYRVLVTGLPPS 120

Query: 137 ASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKLDDSEFRNAFSR 196
           ASWQDLKDHMR+AG+VCFS+VF DR+  GM+GVV+Y++YDDMK A+RKLD +EFRNAFS 
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRK--GMSGVVDYSNYDDMKYAIRKLDATEFRNAFSS 180

Query: 197 AYIRVKE-DSRSLS--PDDRSRSRSRSYSRGRSYS---RSRSRSRSHSISPRRNSRRSYS 256
           AYIRV+E +SRS+S  PDD    RSRS SRG S S   +SRS S + SISPR     S S
Sbjct: 181 AYIRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPL-SRS 240

Query: 257 RSPSKSRSRSPSRSRSRSLSRSRSPVRRRVS 282
           RS   S SRS SRS+SRS SRS SPV   +S
Sbjct: 241 RSLYSSVSRSQSRSKSRSRSRSNSPVSPVIS 267

[Close]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT4G02430.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.400e-77
Identity = 181/273 (66.30%), Postives = 206/273 (75.46%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  RTIYVGNLPGDIREREVED+F KYGP+V+IDLK+PPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGSSYRG-----------GAPKHTD 136
           A++GR+GYDFDGH LRVE AHGGR  SS D R SYSG    G           G  + ++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 120

Query: 137 YRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRKL 196
           YRV+V+GLPSSASWQDLKDHMR+ GEVCFS VF+D R  G  G+V+Y SY+DMK A   L
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGR--GTTGIVDYTSYEDMKYA---L 180

Query: 197 DDSEFRNAFSRAYIRVKE-DSR--SLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSISPR 256
           DD+EFRNAFS  Y+RV+E DSR  S SP  R RS S+S SRGRS SRSRSRSRS S S R
Sbjct: 181 DDTEFRNAFSHEYVRVREYDSRRDSRSP-SRGRSYSKSRSRGRSPSRSRSRSRSRSKS-R 240

Query: 257 RNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSP 276
               +S  RSP+KS SRSP RSRSRS SRS SP
Sbjct: 241 SPKAKSLRRSPAKSTSRSP-RSRSRSKSRSLSP 264

[Close]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT3G49430.1 (SER/ARG-rich protein 34A)

HSP 1 Score: 280.8 bits (717), Expect = 1.000e-75
Identity = 175/294 (59.52%), Postives = 211/294 (71.77%), Query Frame = 1


		  
Query: 17  MTKRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAED 76
           M+ R  R+IYVGNLPGDIRE E+EDIFYKYG IV+I+LKVPPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 77  AVHGRNGYDFDGHRLRVEFAHGGRGSSSSDHRSSYSGS------------SYRGGAPKHT 136
           A+ GR+GY+ DG RLRVE AHGGRG SSSD R  Y G             S R G  +H+
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 137 DYRVMVTGLPSSASWQDLKDHMRRAGEVCFSDVFKDRRYGGMAGVVEYASYDDMKRAVRK 196
           ++RV+V GLPSSASWQDLKDHMR+AG+VCF++V +D    G  GVV+Y +YDDMK A+RK
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDS--DGTYGVVDYTNYDDMKYAIRK 180

Query: 197 LDDSEFRNAFSRAYIRVKE----DSRSLSPDDRSRSRSRSYSRGRSYSRSRSRSRSHSIS 256
           LDD+EFRN ++R +IRVK+     SRS SP   SRSRSRS SR RS  R RS SRS S+S
Sbjct: 181 LDDTEFRNPWARGFIRVKKYESSRSRSRSP---SRSRSRSRSRSRSRGRGRSHSRSRSLS 240

Query: 257 PRRNSRRSYSRSPSKSRSRSPSRSRSRSLSRSRSPVR---RRVSRSASRSLSPA 292
             ++ R+  S+SP +S SRS S+SRS S  + +SP R   R  SRS SRS SP+
Sbjct: 241 RSKSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPS 289

[Close]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-11
Identity = 87/246 (35.37%), Postives = 117/246 (47.56%), Query Frame = 1


		  
Query: 25  IYVGNLPGDIREREVEDIFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDAEDAVHGRNGY 84
           +YVG L    R R++E +F +YG + ++D+K       YAFVEF D RDA+DA H  +G 
Sbjct: 13  LYVGRLSSRTRTRDLERLFSRYGRVRDVDMK-----RDYAFVEFGDPRDADDARHYLDGR 72

Query: 85  DFDGHRLRVEFAHGG-RGSSSSDHRSSYSGSS--YRGGAPKHTDYRVMVTGLPSSASWQD 144
           DFDG R+ VEF+ G  RGS   D R    G+   +  G   H               W  
Sbjct: 73  DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAGRCFNCGVDGH---------------W-- 132

Query: 145 LKDHMRRAGEVCFSDVFKDRRYG-GMAGVVEYASYDDMKRAVRKLDDSEFRNAFSRAYIR 204
                      C +  +K++ Y  G  G +E     + K + +KL  S    ++SR+ +R
Sbjct: 133 --------ARDCTAGDWKNKCYRCGERGHIE----RNCKNSPKKLRRS---GSYSRSPVR 192

Query: 205 VKEDSRSLSPDDRSRSRSRSYSRGRSYSRSRSRS-RSHSISPRRN----SRRSYSRSPSK 262
            +   R  SP  RS SRSRSYSR RS  R R RS    S SP+R     S R+  RSP  
Sbjct: 193 SRSPRRRRSP-SRSLSRSRSYSRSRSPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVL 220

The following BLAST results are available for this feature:

BLAST of Spo20133.1 vs. NCBI nr
BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
BLAST of Spo20133.1 vs. TAIR (Arabidopsis)

BLAST of Spo20133.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902206684\|gb\|KNA15537.1\|	9.3e-140	89.3	hypothetical protein SOVF_0971...	[more]
gi\|731326518\|ref\|XP_010674059.1\|	1.4e-122	86.6	PREDICTED: serine/arginine-ric...	[more]
gi\|902206685\|gb\|KNA15538.1\|	5.1e-122	86.9	hypothetical protein SOVF_0971...	[more]
gi\|902206683\|gb\|KNA15536.1\|	5.1e-122	86.9	hypothetical protein SOVF_0971...	[more]
gi\|731326522\|ref\|XP_010674061.1\|	5.1e-114	88.6	PREDICTED: serine/arginine-ric...	[more]

BLAST of Spo20133.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R9T7_SPIOL	6.5e-140	89.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQF1_BETVU	9.4e-123	86.6	Uncharacterized protein OS=Bet...	[more]
A0A0K9R7N0_SPIOL	3.6e-122	86.9	Uncharacterized protein OS=Spi...	[more]
A0A0K9R7R2_SPIOL	3.6e-122	86.9	Uncharacterized protein OS=Spi...	[more]
A0A0K9QW99_SPIOL	4.7e-90	67.6	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo20133.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SR34_ARATH	6.3e-80	63.3	Serine/arginine-rich-splicing ...	[more]
SR30_ARATH	1.1e-76	66.7	Serine/arginine-rich splicing ...	[more]
SR34B_ARATH	2.5e-76	66.3	Serine/arginine-rich splicing ...	[more]
SR34A_ARATH	1.8e-74	59.5	Serine/arginine-rich splicing ...	[more]
SRSF1_BOVIN	4.3e-52	55.5	Serine/arginine-rich splicing ...	[more]

BLAST of Spo20133.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G02840.1	3.6e-81	63.3	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G09140.1	6.3e-78	66.7	SERINE-ARGININE PROTEIN 30	[more]
AT4G02430.2	1.4e-77	66.3	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G49430.1	1.0e-75	59.5	SER/ARG-rich protein 34A	[more]
AT2G37340.1	1.0e-11	35.3	arginine/serine-rich zinc knuc...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 128..192 score: 1.3E-9coord: 25..92 score: 3.1
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 127..198 score: 2.7E-6coord: 24..94 score: 2.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 23..98 score: 18.973coord: 126..206 score: 9
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 17..103 score: 1.1E-26coord: 123..220 score: 1.4
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 23..200 score: 1.57
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 259..275 score: 5.9E-42coord: 1..213 score: 5.9
None	No IPR available	PANTHER	PTHR24012:SF487	SUBFAMILY NOT NAMED	coord: 259..275 score: 5.9E-42coord: 1..213 score: 5.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006376	mRNA splice site selection
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0035061	interchromatin granule
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003729	mRNA binding