Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAGGGAATTTGGGGGAAATTCAAAATCAAAAGAGGCGCTCCTTTCTGTGTGTAATAATTTAGGTCTAGGGTTTGCAGGAGCGGAAGTTGAGATTAAAGTGGGAAGGATCACAGACGAAGAATCGGAGAAGAAGGATTTTTCAGAAAAATGGACAAGTACGAGAAATTGGAGAAGGTTGGGGAAGGAACTTACGGTAAGGTGTACAAGGCAAAAGAGAAAACGACGGGGCAACTGGTGGCTTTGAAGAAGACTCGGTTGGAGATGGATGAGGAAGGTGTTCCTCCGACGGCGCTTAGGGAGGTTTCTCTTTTACAGATGCTTTCTCAGTCACTGTATGTAGTGAGGCTACTGTGTGTTGAACATGTTGATAAGAAGAACACCACCACCGGAATCTCAAAACCACTTCTTTACCTAGTGTTTGAATATCTCGACACCGATCTTAAGAAATTCATCGATTCTCACCGCAAAGGCTCCAATCCCCGTCCTCTTCCCCCTTCTCAGGTTCACCTCTTGATCTTTAACATCCCTCTATCCTGTTTGAATGACAGAGTAATTATTATATGAATCACAGGTTCAGTTCTCATCTTCAGATATTCCTCTATCCTGTTTGAATGACATAAAGATTCAGTTCTTGATCTTCGGATATTCTCCTATCCTGTTTGAATCACATAGTACATGAATTTCAGGTTCAGTGCTTTCTCTTTCAACTTCTCAAGGGAGTTTCTCATTGCCATAGCCATGGTGTCCTTCACAGAGATCTCAAGCCTCAGAATCTTTTAGTTGACAAAGATAAGGGTATTCTCAAGATTGCTGATCTCGGTTTGGGCAGGTCTTTTACTGTTCCTATGAAGAGCTATACTCACGAGGTCTATTTCTTTTTCTTTCAATTCCATTCAATTCAATTCTTAGAGATTTTAATTGAATTATTAATTACTTATGAAGATCGTCACCCTCTGGTATCGAGCACCCGAGGTTTTACTTGGTTCCACCCATTACTCTACTGGTGTCGATATTTGGTCTGTTGGTTGCATCTTTGGTAATAATCTATCCCATTCTTATTCAAGTTTCATCATCCCTTGATCATTTTCTGATTCATTTCAATCCAATTTCCCTTTTGCAGCTGAAATGGTCAGAAGACAAGCTTTGTTTCCTGGAGATTCTGAATTTCAACAGCTTTTACACATCTTTAGGTACATACTCTCACCCCATTCAGTCTTAATAATAGTTATTACTTCATTTTTTGCACTTGTAGTCCTTGGTTTTATGGCTGTGAATTATTCATATATTGGTTGGTTGATCATGTAAGGTTGTTGGGAACACCAACTGATGAGCAGTGGCCTGGAGTAAGTTCTCTAAGGGACTGGCATGTGTATCCACAGTGGGAGGCTCAGAATCTTGCTCGTGCAGTTCCATCGTTGGGACCTGATGGTGTTGATCTCTTATCTGTGAGTCCCCCACTTCAGTTCTTGTTTATTACGTTTTCTATGGCTGTTTATCTATCCTGTTTTGATATAGTGACATAGTTTAGAATGGAGTTCCAGTGCAAGTCACATATAACACCAACCAGTAGAATAGTAGATACCCAATTTGAGAAATTGCTGAGGATTTAGAAACTTCTGAATGAACAGAGAGACAGTTGTGGACTTGTGGTGATACAAACTAATTATAGTGAAGTAGCGAGTTAACATAGGTTACAAACTTGGAAATTTAGCTAATTTTGGTACGCTGAATTGCCTATGATATGACTTAAGGGTCATTCCCTGTCGATTGGTTCTGGGTTAACAATATATGAGAAATTCCCAATTTCTTTACATAATAATATTGATTACTTGTTTATTTCCTCCTATCTCTAACCTGTACAAGCCACCTGCATTTTCCCCTCTCATTTTACTTACCCAGCAAATTTGAAATGCTATCAGCTTTTCTGGGTACATGTAAATGTTGCTTATCATGGAAAGGAGGAAGGAATTAGATTGTTTCCTTGATTATGATATAATGGATCTAGAGTATTCACTGGAAGCATATCATTGTATCCGTCAGTTGCCACTGCAATAAGTATGCTTTTGATAAATAGACTTCCCTCTATTTCACAATAAGCTACAATAAGTATGCTTTTGATAAATAGAATTCCCTGTATTTCATAATAAACTTCACACTGGCTTTACCACGGTTGCCAAGACATTTCTTTATCATTATATATGATTGTGCATTAACCAAATTGTAGAAAGCTGGTAGTTGAAACTACACACTAACTAGATCCCACGATTCAAATAATATTTAGAAATTAGGTTTGCAAGAGCATGTAGCACTAGATAGAAGTGAATTGAGAAAGAGGGTCTTTGTGAATGATCACTAGAGTTCATGCCAAACGAGTGAACAATACCCATCCATATGGGGATAAGGCTTTGGTTATATCAAGCTACTGTTAAGGTTGCATTTCTGGATGTTTTTTAGTGTTTTTGTTGCTCCACTGTTGACGAGAGAATGCTATTACTTGTAAACTATGGGTCTGACTCTGGCTCCTCGCAGCAAACCAAAATCTGATGCTCTCATTATAAAACAGACCGAGAAATTGGAGTTCCAATTTCATACTGCACTTTTTTCTTTTTCTTTTGTCTTTTGACATGTTCATACAGAACAAGTGTATGAATCTGATTGACTCTTGTGTCCTGTGACTGAATGACTCCTGTCCTTGTCATTTCAGACTAACTTTATATCAAGATAAATAACATTGATGTTCCTTGTTCTGTCCAAGTATATACAGTATATGAACTATGAAGTCAATCCTAATTTTTATTTTAACCACCACAGCCCATAAGGGGGACCAGAAACTAGTAGTTCTAGTAGTTAGCACTTGATATAACGACCTTGGTTGAGAAATGCTTACTTGTAAATTATGACCAACGTACAAGTTATTGAAAAGGAGTTTGTTAGTTTGGTACTTTTTGAACTGTTTCGTTTAATGTATGTTTAAGCCTATGTCCAAAAAAAAAACAGAAATAAAGATAAGGAGTTTGTTTTATGCATAATGCAAATCTGTCCTAGCTCCATGAAAGATCGGATATCCTTTTCAAGTTTGGGTTTGATCCTAATGTAAACCTTCTGGGGATATAATTTAAGAAATGTGATGAGAGTTAGAATTTTGTTGACGTTGTTGTGCCCCAAATATATCGTCAGTTTAATATGATTATGTCTTGAGAGGTACACTGAGATGCTTTGTTTTGATTTTGTAGAAAATGCTGAAATATGATCCAGCAGAAAGGATCTCGGCCAAAGCAGCACTGGACCATCCTTACTTTGATAACCTTGATAAGTCTCAATTCTAAGAATGGTATGGGATCTATCTAACTGAAGAGGGACTTGTGTAAGTTGTGTTTGTGTGATTTATTCAATGTATTTGATCACTGTGGAATGTGTCATCTTCTTGGTGATATTTTCATTAACAAGCTGAAATGTTTGTGAGAACTCTGGTTTGTAAAGAGATATATGTTGAGGATATTTCCACATACTTGATTAATTAACTGACCCGATACTTTCTACTTATTACCTGACCCA ATTAGGGAATTTGGGGGAAATTCAAAATCAAAAGAGGCGCTCCTTTCTGTGTGTAATAATTTAGGTCTAGGGTTTGCAGGAGCGGAAGTTGAGATTAAAGTGGGAAGGATCACAGACGAAGAATCGGAGAAGAAGGATTTTTCAGAAAAATGGACAAGTACGAGAAATTGGAGAAGGTTGGGGAAGGAACTTACGGTAAGGTGTACAAGGCAAAAGAGAAAACGACGGGGCAACTGGTGGCTTTGAAGAAGACTCGGTTGGAGATGGATGAGGAAGGTGTTCCTCCGACGGCGCTTAGGGAGGTTTCTCTTTTACAGATGCTTTCTCAGTCACTGTATGTAGTGAGGCTACTGTGTGTTGAACATGTTGATAAGAAGAACACCACCACCGGAATCTCAAAACCACTTCTTTACCTAGTGTTTGAATATCTCGACACCGATCTTAAGAAATTCATCGATTCTCACCGCAAAGGCTCCAATCCCCGTCCTCTTCCCCCTTCTCAGGTTCAGTGCTTTCTCTTTCAACTTCTCAAGGGAGTTTCTCATTGCCATAGCCATGGTGTCCTTCACAGAGATCTCAAGCCTCAGAATCTTTTAGTTGACAAAGATAAGGGTATTCTCAAGATTGCTGATCTCGGTTTGGGCAGGTCTTTTACTGTTCCTATGAAGAGCTATACTCACGAGATCGTCACCCTCTGGTATCGAGCACCCGAGGTTTTACTTGGTTCCACCCATTACTCTACTGGTGTCGATATTTGGTCTGTTGGTTGCATCTTTGCTGAAATGGTCAGAAGACAAGCTTTGTTTCCTGGAGATTCTGAATTTCAACAGCTTTTACACATCTTTAGGTTGTTGGGAACACCAACTGATGAGCAGTGGCCTGGAGTAAGTTCTCTAAGGGACTGGCATGTGTATCCACAGTGGGAGGCTCAGAATCTTGCTCGTGCAGTTCCATCGTTGGGACCTGATGGTGTTGATCTCTTATCTAAAATGCTGAAATATGATCCAGCAGAAAGGATCTCGGCCAAAGCAGCACTGGACCATCCTTACTTTGATAACCTTGATAAGTCTCAATTCTAAGAATGGTATGGGATCTATCTAACTGAAGAGGGACTTGTGTAAGTTGTGTTTGTGTGATTTATTCAATGTATTTGATCACTGTGGAATGTGTCATCTTCTTGGTGATATTTTCATTAACAAGCTGAAATGTTTGTGAGAACTCTGGTTTGTAAAGAGATATATGTTGAGGATATTTCCACATACTTGATTAATTAACTGACCCGATACTTTCTACTTATTACCTGACCCA ATGGACAAGTACGAGAAATTGGAGAAGGTTGGGGAAGGAACTTACGGTAAGGTGTACAAGGCAAAAGAGAAAACGACGGGGCAACTGGTGGCTTTGAAGAAGACTCGGTTGGAGATGGATGAGGAAGGTGTTCCTCCGACGGCGCTTAGGGAGGTTTCTCTTTTACAGATGCTTTCTCAGTCACTGTATGTAGTGAGGCTACTGTGTGTTGAACATGTTGATAAGAAGAACACCACCACCGGAATCTCAAAACCACTTCTTTACCTAGTGTTTGAATATCTCGACACCGATCTTAAGAAATTCATCGATTCTCACCGCAAAGGCTCCAATCCCCGTCCTCTTCCCCCTTCTCAGGTTCAGTGCTTTCTCTTTCAACTTCTCAAGGGAGTTTCTCATTGCCATAGCCATGGTGTCCTTCACAGAGATCTCAAGCCTCAGAATCTTTTAGTTGACAAAGATAAGGGTATTCTCAAGATTGCTGATCTCGGTTTGGGCAGGTCTTTTACTGTTCCTATGAAGAGCTATACTCACGAGATCGTCACCCTCTGGTATCGAGCACCCGAGGTTTTACTTGGTTCCACCCATTACTCTACTGGTGTCGATATTTGGTCTGTTGGTTGCATCTTTGCTGAAATGGTCAGAAGACAAGCTTTGTTTCCTGGAGATTCTGAATTTCAACAGCTTTTACACATCTTTAGGTTGTTGGGAACACCAACTGATGAGCAGTGGCCTGGAGTAAGTTCTCTAAGGGACTGGCATGTGTATCCACAGTGGGAGGCTCAGAATCTTGCTCGTGCAGTTCCATCGTTGGGACCTGATGGTGTTGATCTCTTATCTAAAATGCTGAAATATGATCCAGCAGAAAGGATCTCGGCCAAAGCAGCACTGGACCATCCTTACTTTGATAACCTTGATAAGTCTCAATTCTAA MDKYEKLEKVGEGTYGKVYKAKEKTTGQLVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLCVEHVDKKNTTTGISKPLLYLVFEYLDTDLKKFIDSHRKGSNPRPLPPSQVQCFLFQLLKGVSHCHSHGVLHRDLKPQNLLVDKDKGILKIADLGLGRSFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTDEQWPGVSSLRDWHVYPQWEAQNLARAVPSLGPDGVDLLSKMLKYDPAERISAKAALDHPYFDNLDKSQF Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo19684.1 vs. NCBI nr
Match: gi|902189324|gb|KNA11349.1| (hypothetical protein SOVF_136010 [Spinacia oleracea]) HSP 1 Score: 638.6 bits (1646), Expect = 5.400e-180 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
BLAST of Spo19684.1 vs. NCBI nr
Match: gi|731371371|ref|XP_010666022.1| (PREDICTED: cell division control protein 2 homolog C [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 605.9 bits (1561), Expect = 3.900e-170 Identity = 292/309 (94.50%), Postives = 300/309 (97.09%), Query Frame = 1
BLAST of Spo19684.1 vs. NCBI nr
Match: gi|747094688|ref|XP_011095191.1| (PREDICTED: cell division control protein 2 homolog C [Sesamum indicum]) HSP 1 Score: 583.2 bits (1502), Expect = 2.700e-163 Identity = 281/309 (90.94%), Postives = 292/309 (94.50%), Query Frame = 1
BLAST of Spo19684.1 vs. NCBI nr
Match: gi|1009159385|ref|XP_015897783.1| (PREDICTED: cell division control protein 2 homolog C [Ziziphus jujuba]) HSP 1 Score: 582.8 bits (1501), Expect = 3.500e-163 Identity = 276/309 (89.32%), Postives = 296/309 (95.79%), Query Frame = 1
BLAST of Spo19684.1 vs. NCBI nr
Match: gi|661890115|emb|CDP06337.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 582.8 bits (1501), Expect = 3.500e-163 Identity = 280/312 (89.74%), Postives = 297/312 (95.19%), Query Frame = 1
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVR0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136010 PE=3 SV=1) HSP 1 Score: 638.6 bits (1646), Expect = 3.800e-180 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B5X5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225480 PE=3 SV=1) HSP 1 Score: 605.9 bits (1561), Expect = 2.700e-170 Identity = 292/309 (94.50%), Postives = 300/309 (97.09%), Query Frame = 1
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Match: A0A068UDI8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023137001 PE=3 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 2.500e-163 Identity = 280/312 (89.74%), Postives = 297/312 (95.19%), Query Frame = 1
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Match: C5DB66_VITVI (Kinase cdc2 homolog B OS=Vitis vinifera GN=VIT_08s0056g00210 PE=3 SV=1) HSP 1 Score: 580.1 bits (1494), Expect = 1.600e-162 Identity = 278/309 (89.97%), Postives = 294/309 (95.15%), Query Frame = 1
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Match: A0A068VN88_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00008820001 PE=3 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 3.600e-162 Identity = 281/314 (89.49%), Postives = 297/314 (94.59%), Query Frame = 1
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 8.500e-157 Identity = 272/310 (87.74%), Postives = 287/310 (92.58%), Query Frame = 1
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2) HSP 1 Score: 553.5 bits (1425), Expect = 1.400e-156 Identity = 263/311 (84.57%), Postives = 290/311 (93.25%), Query Frame = 1
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2) HSP 1 Score: 540.8 bits (1392), Expect = 9.700e-153 Identity = 257/309 (83.17%), Postives = 284/309 (91.91%), Query Frame = 1
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 5.000e-149 Identity = 250/309 (80.91%), Postives = 281/309 (90.94%), Query Frame = 1
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2) HSP 1 Score: 424.1 bits (1089), Expect = 1.300e-117 Identity = 203/308 (65.91%), Postives = 250/308 (81.17%), Query Frame = 1
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Match: AT2G38620.2 (cyclin-dependent kinase B1;2) HSP 1 Score: 553.5 bits (1425), Expect = 8.100e-158 Identity = 263/311 (84.57%), Postives = 290/311 (93.25%), Query Frame = 1
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Match: AT3G54180.1 (cyclin-dependent kinase B1;1) HSP 1 Score: 540.8 bits (1392), Expect = 5.500e-154 Identity = 257/309 (83.17%), Postives = 284/309 (91.91%), Query Frame = 1
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Match: AT1G20930.1 (cyclin-dependent kinase B2;2) HSP 1 Score: 424.1 bits (1089), Expect = 7.400e-119 Identity = 203/308 (65.91%), Postives = 250/308 (81.17%), Query Frame = 1
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Match: AT1G76540.1 (cyclin-dependent kinase B2;1) HSP 1 Score: 413.3 bits (1061), Expect = 1.300e-115 Identity = 196/304 (64.47%), Postives = 243/304 (79.93%), Query Frame = 1
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Match: AT3G48750.1 (cell division control 2) HSP 1 Score: 356.3 bits (913), Expect = 1.900e-98 Identity = 172/305 (56.39%), Postives = 230/305 (75.41%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19684.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19684.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19684.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19684.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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