Spo19642.1 (mRNA)

Overview
NameSpo19642.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUBIQUITIN-CONJUGATING ENZYME 17 family protein
LocationSpoScf_00990 : 125666 .. 129137 (+)
Sequence length1205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCACATTTACAAGAGTATAATTAATTAAGGAATAAAACCAAATCCATAAATACAATTTTCTTTCTTTCTTTCTCCGATTATTGAAAATTCCTGTTTCCCCTCTCTCTCTCCGGAACGAAGATGACCACCTCCTCCGCCACCTCTCGCAAGGTCATTTTCTTGATCTCTTTCGTCCTTTAATTACCTTATGATTTTAATTTTAATTTTAATTTTAATTTCAATTTCTTCGAAATTCAATTTCAATTCGATTGATCTTAATTTTCCAGCTTTTAATTTTTCACATATTGACTAATATGAACTTTTTTTGGTTTTGGAATTGATTTGAAAAGACACTTAGCAAAATAGCAAGCAATAGGCTTCAAAAGGAACTCGTTGAGTGGCAACTCAATCCTCCTACTGGTTTCAAGCACAAAGTCACTGATAATCTCCAAAGGTGTTTCCTCTTTTTCCAAATTTAATTTTAAAGTTTCAATTTTTTTAGGGTTTTGGTTGAATAATGATCAAATTGGAAGTTGGGTTTGTTTCCTTCTTCGATTTTGGAGTCTGGGTATTCTTTAATTTTCCTTTGATTTAATTGGATTTTGTAAAAAAAGGTGGATAATAGAAGTAATTGGAGCACCAGGAACACTGTATACAAATGAGATATACCAACTTCAAGTTGATTTTCCTGAGCATTACCCCATGGAAGCCCCTCAGGTCTTTTTTCTTTTCTGGTCAATCTTTTGTTGTTTCAATGATCAATTGAATTTGTATGGGAATGAGGTAATTTCTATTGTGCAACCATGACTAGTTTTTGCTTATTTGTTCTTATGGAGGAGTTCTAAAAGAGCAAATGAGCAAAGAATGAGTACAACCTATGCAATTGATGATTAATGGTACTGATGATTTGAAATTGATTGATTGATTGTTGTTGTTGTTGTTGTTGTTGGTACAGGTGATATTTGTGAATCCGGCTCCAATTCACCCTCATATTTATAGTAACGGCCATATATGCTTAGGTAATTTTTTTCCTTTTTGTACTTGTTTATACTTCTTATGGTATTTTACATTGGTTTCAGATCGATATGGCTCCAATTTCTCGAAATGGGTATTAAGCTTTGCTTTGTTTTATGACTTTTATCTCAAGTTTGGTTGTTGTTGGATTAAGTAGAGCAGGATTAGTCCTCATGCGCATTTTTTTACTTCCCTTCTCCGCTCCCCCTTCGCCGTCACTCTATTTTAGTGATTGATTGTTTCTAGTACGAAAGGGGGTTATTCTTATTGGTGTTGTAGATTGTTAAATCGCTTCTGTTCCTTGTTGGATTGGTCTTCAGTTTATTAGGTCTCTCTGTCATACCGATTAATTGATCATTATACCCATATCAAGAGTTTATACTCTGTGATTGTGGTTATTTCCATACTGAAATTTAGTTTTGATATTCATGCAGCGAACTGACACAGTATCACCTGGATTAGTCTTAACTCTTAAAGATTTTTTCTTTTCTTTTCCGTGACTTCATAAGTTTATTGTGCCTTTTGTTATGTGTATGTTTCTCATTGATTATTTATGGACCATTGTACTCAATTTTAGTTCAAATGTCTCATGGTGTGGGTTTATCCACCAATCACCTGATAAGTTTTAGAGCTCTGAGCTCTTTTCATAACTTCATAATTCCATTATGCAGCAATTAGGCTTACATTTTTGGGTTTACCATGGCATCCTTAACCTGGTGCCTGGTGATAACCTCAGTAATGATGGATTTATTGCGAGTCATTATCGTTGACTTGTTGAACCGATGGAACTAAAAACAGTCACCGAATACGTCACTTTGTGAATACAACTTTCATATCTCAGTAAGATATTGATGTTGTGAATCTTGTTATCACATTATTGGCTGGGGGTTAGTTATTTTTGAAGATAAGTGTTGTATATGTCCATTGCACTAACATATTATATAGGTCAATGCTGCAAACTGATTCCTTATGTTTAAAAATATTCTAGATTTAAAAATAAATAAATCTATTTGACCATTTTCTAAACAATTTGATGTTTTAATATATTAATCTTATTCCCTGATGGCATTCTATGAGGAGGTTTACAATTTTGGTTGTTATTATTGCAGATATTCTGTATGACTCATGGTCTCCAGCTATGACAGTGAGTTCTATCTGCATTAGCATCCTTTCGATGCTATCAAGCTCTACGGTGAAGGTGTGCCATCTGTTTCTTTTAAAGAATTAGCTTTTGGAAAATATAATTGTGAGGTTCAAAATGTTTACGAGATTGCATGGAGATATGTACTTGTAAAATAGTTGTATCACTGAAGAGAGTCTGGCTAAAGATGGCCGTGGGCGGGTCAGGCTTCAGGCCGAGCCTACGGGCCCACGCCAATCCCACTCTGCATTGTGCCGGGTCGGGCTGAAAAGTTCAAAACAGGGCCCTTGTCTGGCTGTCAGGACTGGTCGGGCAGTCGTGCCTAAGCCTAATTTTACTAAATTTAGCGTGTTGGGTCGAGTCGTGTCGTTCTTTTTCCAAAAAAATGCGGCCCAGGCCCGGTCTACGGCCCACGACTTTGTGCTCGTGCCGGACCGTGTTTTTTCATGCCTGTGCCATACCAGGATTTTTTCATGTCTCACAGCCATCTTTAAGTCTGAATTCCTAGTGATGTCTCTGTCTGTAGTGATCATTTGGATGAATTATTATCTGCTGTTTTTTTGCCATTTCTGTTTCCAGACTATAAAATTTTTTATCGACTTCCGATCAATAGAGAAAACTAATATTGAATTTGACCAAGCAGGAAAGGCCCGAGGATAATGATCGCTACGTGAAGAATTGTAGAAACGGAAGATCTCCAAAGGAGACTAGATGGTGGTTCCATGATGACAAAGTATGAAGGTCTAGTTAAGCAAATCTCTGTCATAATTTGTTCATGACACCAGATTAGTCTTCTAACTCTTCTAAGATTATATAAATGAACGGAAGCTTTCTTGGAAAATCAGATTAATCGTTGTCCTTTTCTGTTTGATAGTAACTTATTTGAGGAAGGCTTCGGTTTTTTGTATAGGAGAGAACCTTGTATCATTGTATGTACTACTTCATAATATGTGTGATGGTGAATAAAGCTGGGTTTTCAATGGGTTGTTCGGGGTTGCTCAAATACTCGAGTTTTATGCTCATTTGATTAAACAACCCCCTTCAATTTCACCCATGAATAAGGCTATGAAAAAAAGGAGAAAAATGTACTTGTTCATTGTTGTTTATCTGGCTTTATTTCAGTGATGTTTTCAGGTATGAGAATTGTGATTTGCGATATTAGTATAGTTAGAGCTGTGTTTGCTCCACGGCCTATGATACTGTATGAGCTTGTATTTGGTGCATTGACTGTTTTGGTGTAATCTTTCGCTACATAAAGCGGAGTCTTCGTTATGCGATGTTCGATTTGTATGAACTTTGATGTTGCTAGATTATCCAAAGAAACAAATAAGGGGCA

mRNA sequence

GGCCACATTTACAAGAGTATAATTAATTAAGGAATAAAACCAAATCCATAAATACAATTTTCTTTCTTTCTTTCTCCGATTATTGAAAATTCCTGTTTCCCCTCTCTCTCTCCGGAACGAAGATGACCACCTCCTCCGCCACCTCTCGCAAGACACTTAGCAAAATAGCAAGCAATAGGCTTCAAAAGGAACTCGTTGAGTGGCAACTCAATCCTCCTACTGGTTTCAAGCACAAAGTCACTGATAATCTCCAAAGGTGGATAATAGAAGTAATTGGAGCACCAGGAACACTGTATACAAATGAGATATACCAACTTCAAGTTGATTTTCCTGAGCATTACCCCATGGAAGCCCCTCAGGTGATATTTGTGAATCCGGCTCCAATTCACCCTCATATTTATAGTAACGGCCATATATGCTTAGATATTCTGTATGACTCATGGTCTCCAGCTATGACAGTGAGTTCTATCTGCATTAGCATCCTTTCGATGCTATCAAGCTCTACGGTGAAGGAAAGGCCCGAGGATAATGATCGCTACGTGAAGAATTGTAGAAACGGAAGATCTCCAAAGGAGACTAGATGGTGGTTCCATGATGACAAAGTATGAAGGTCTAGTTAAGCAAATCTCTGTCATAATTTGTTCATGACACCAGATTAGTCTTCTAACTCTTCTAAGATTATATAAATGAACGGAAGCTTTCTTGGAAAATCAGATTAATCGTTGTCCTTTTCTGTTTGATAGTAACTTATTTGAGGAAGGCTTCGGTTTTTTGTATAGGAGAGAACCTTGTATCATTGTATGTACTACTTCATAATATGTGTGATGGTGAATAAAGCTGGGTTTTCAATGGGTTGTTCGGGGTTGCTCAAATACTCGAGTTTTATGCTCATTTGATTAAACAACCCCCTTCAATTTCACCCATGAATAAGGCTATGAAAAAAAGGAGAAAAATGTACTTGTTCATTGTTGTTTATCTGGCTTTATTTCAGTGATGTTTTCAGGTATGAGAATTGTGATTTGCGATATTAGTATAGTTAGAGCTGTGTTTGCTCCACGGCCTATGATACTGTATGAGCTTGTATTTGGTGCATTGACTGTTTTGGTGTAATCTTTCGCTACATAAAGCGGAGTCTTCGTTATGCGATGTTCGATTTGTATGAACTTTGATGTTGCTAGATTATCCAAAGAAACAAATAAGGGGCA

Coding sequence (CDS)

ATGACCACCTCCTCCGCCACCTCTCGCAAGACACTTAGCAAAATAGCAAGCAATAGGCTTCAAAAGGAACTCGTTGAGTGGCAACTCAATCCTCCTACTGGTTTCAAGCACAAAGTCACTGATAATCTCCAAAGGTGGATAATAGAAGTAATTGGAGCACCAGGAACACTGTATACAAATGAGATATACCAACTTCAAGTTGATTTTCCTGAGCATTACCCCATGGAAGCCCCTCAGGTGATATTTGTGAATCCGGCTCCAATTCACCCTCATATTTATAGTAACGGCCATATATGCTTAGATATTCTGTATGACTCATGGTCTCCAGCTATGACAGTGAGTTCTATCTGCATTAGCATCCTTTCGATGCTATCAAGCTCTACGGTGAAGGAAAGGCCCGAGGATAATGATCGCTACGTGAAGAATTGTAGAAACGGAAGATCTCCAAAGGAGACTAGATGGTGGTTCCATGATGACAAAGTATGA

Protein sequence

MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTNEIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo19642Spo19642gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo19642.1Spo19642.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19642.1.exon.1Spo19642.1.exon.1exon
Spo19642.1.exon.2Spo19642.1.exon.2exon
Spo19642.1.exon.3Spo19642.1.exon.3exon
Spo19642.1.exon.4Spo19642.1.exon.4exon
Spo19642.1.exon.5Spo19642.1.exon.5exon
Spo19642.1.exon.6Spo19642.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19642.1.utr5p.1Spo19642.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19642.1.CDS.1Spo19642.1.CDS.1CDS
Spo19642.1.CDS.2Spo19642.1.CDS.2CDS
Spo19642.1.CDS.3Spo19642.1.CDS.3CDS
Spo19642.1.CDS.4Spo19642.1.CDS.4CDS
Spo19642.1.CDS.5Spo19642.1.CDS.5CDS
Spo19642.1.CDS.6Spo19642.1.CDS.6CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo19642.1.utr3p.1Spo19642.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo19642.1 vs. NCBI nr
Match: gi|902239851|gb|KNA25759.1| (hypothetical protein SOVF_003950 [Spinacia oleracea])

HSP 1 Score: 336.3 bits (861), Expect = 3.000e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN
Sbjct: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. NCBI nr
Match: gi|731337467|ref|XP_010679804.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.4 bits (825), Expect = 4.500e-85
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MTTSS TSRKTLSKIASNRLQKEL EWQLNPPTGFKHKVTDNLQRWIIEV GAPGTLY N
Sbjct: 1   MTTSSTTSRKTLSKIASNRLQKELAEWQLNPPTGFKHKVTDNLQRWIIEVNGAPGTLYVN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIF+ PAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLPPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. NCBI nr
Match: gi|1009144626|ref|XP_015889904.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba])

HSP 1 Score: 317.8 bits (813), Expect = 1.100e-83
Identity = 149/161 (92.55%), Postives = 156/161 (96.89%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSATSRK LSKIA NRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEV GAPGTLY N
Sbjct: 1   MTSSSATSRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. NCBI nr
Match: gi|702467481|ref|XP_010029738.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Eucalyptus grandis])

HSP 1 Score: 317.4 bits (812), Expect = 1.400e-83
Identity = 149/161 (92.55%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSA SRK LSKIASNRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEV GAPGTLY N
Sbjct: 1   MTSSSAASRKVLSKIASNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIFV PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. NCBI nr
Match: gi|566170926|ref|XP_006383151.1| (UBIQUITIN-CONJUGATING ENZYME 17 family protein [Populus trichocarpa])

HSP 1 Score: 317.4 bits (812), Expect = 1.400e-83
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS T+RK LSKIA NRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEVIGAPGTLY N
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3F9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003950 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.100e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN
Sbjct: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7E0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g129530 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.100e-85
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MTTSS TSRKTLSKIASNRLQKEL EWQLNPPTGFKHKVTDNLQRWIIEV GAPGTLY N
Sbjct: 1   MTTSSTTSRKTLSKIASNRLQKELAEWQLNPPTGFKHKVTDNLQRWIIEVNGAPGTLYVN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIF+ PAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLPPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Match: A0A059ARU5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02390 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.000e-83
Identity = 149/161 (92.55%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSA SRK LSKIASNRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEV GAPGTLY N
Sbjct: 1   MTSSSAASRKVLSKIASNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIFV PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Match: B9MXK5_POPTR (UBIQUITIN-CONJUGATING ENZYME 17 family protein OS=Populus trichocarpa GN=POPTR_0005s12060g PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.000e-83
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS T+RK LSKIA NRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEVIGAPGTLY N
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPEHYPMEAPQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Match: I3SRG0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 5.000e-83
Identity = 147/161 (91.30%), Postives = 157/161 (97.52%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSA +RKTLSKIA NRLQKELVEWQ+NPPTGFKHKVTDNLQRW+IEV GAPGTLY+N
Sbjct: 1   MTSSSAAARKTLSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVAGAPGTLYSN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQVDFPE+YPMEAPQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTVK+RPEDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.100e-83
Identity = 144/161 (89.44%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           M++S A SRKTLSKIA+NRLQKELVEWQ+NPPTGFKHKVTDNLQRWIIEVIGAPGTLY N
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           + YQLQVDFPEHYPME+PQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 3.300e-80
Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSA SRK LSKIA NRLQKEL EWQLNPPTGF+HKVTDNLQ+W I+V GAPGTLY N
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQV+FPEHYPMEAPQV+FV+PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 9.700e-80
Identity = 137/161 (85.09%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS+ SRK LSKIA NRLQKEL EWQ+NPPTGFKH+VTDNLQ+W+IEV GAPGTLY N
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E Y LQV+FP+HYPMEAPQVIFV PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.600e-74
Identity = 127/161 (78.88%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS ++RK L+KIA+NRLQKE +EWQ NPP+GFKH+V+DNLQRWIIEV G PGTLY N
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQV+FPEHYPMEAPQVIF +PAP+HPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+VK++P+DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.100e-42
Identity = 81/145 (55.86%), Postives = 103/145 (71.03%), Query Frame = 1 

		  

Query: 17  SNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTNEIYQLQVDFPEHYPME 76
           + RLQKEL++ + NPP        DNL +W+I V G  G++Y  E ++LQ  F   YP++
Sbjct: 6   AKRLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLD 65

Query: 77  APQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKERPEDN 136
           +P+VIF+   PIHPHIYSNGHICL ILYD+WSPA+TVSS+C+SILSMLS  T K RP D+
Sbjct: 66  SPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDD 125

Query: 137 DRYVKNCRNGRSPKETRWWFHDDKV 162
            +YV    N +SPKE RW FHDD V
Sbjct: 126 SKYVSRVLN-KSPKEVRWMFHDDTV 149
[Close]
BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16)

HSP 1 Score: 310.5 bits (794), Expect = 6.200e-85
Identity = 144/161 (89.44%), Postives = 155/161 (96.27%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           M++S A SRKTLSKIA+NRLQKELVEWQ+NPPTGFKHKVTDNLQRWIIEVIGAPGTLY N
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           + YQLQVDFPEHYPME+PQVIF++PAP+HPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 298.9 bits (764), Expect = 1.900e-81
Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SSA SRK LSKIA NRLQKEL EWQLNPPTGF+HKVTDNLQ+W I+V GAPGTLY N
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQV+FPEHYPMEAPQV+FV+PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18)

HSP 1 Score: 297.4 bits (760), Expect = 5.500e-81
Identity = 137/161 (85.09%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS+ SRK LSKIA NRLQKEL EWQ+NPPTGFKH+VTDNLQ+W+IEV GAPGTLY N
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E Y LQV+FP+HYPMEAPQVIFV PAP+HPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  K+RP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Match: AT4G36410.1 (ubiquitin-conjugating enzyme 17)

HSP 1 Score: 280.0 bits (715), Expect = 9.000e-76
Identity = 127/161 (78.88%), Postives = 149/161 (92.55%), Query Frame = 1 

		  

Query: 1   MTTSSATSRKTLSKIASNRLQKELVEWQLNPPTGFKHKVTDNLQRWIIEVIGAPGTLYTN 60
           MT+SS ++RK L+KIA+NRLQKE +EWQ NPP+GFKH+V+DNLQRWIIEV G PGTLY N
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  EIYQLQVDFPEHYPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           E YQLQV+FPEHYPMEAPQVIF +PAP+HPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTVKERPEDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+VK++P+DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161
[Close]
BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 88.2 bits (217), Expect = 5.000e-18
Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 1 

		  

Query: 15  IASNRLQKELVEWQLNPPTG--FKHKVTDNLQRWIIEVIGAPGTLYTNEIYQLQVDFPEH 74
           +AS R+ KEL + Q +PPT   F   V +++  W   ++G   + Y+  ++ + + FP  
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 75  YPMEAPQVIFVNPAPIHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 126
           YP + P+V F      HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+
Sbjct: 61  YPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 112
The following BLAST results are available for this feature:
BLAST of Spo19642.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239851|gb|KNA25759.1|3.0e-89100.hypothetical protein SOVF_0039... [more]
gi|731337467|ref|XP_010679804.1|4.5e-8595.6PREDICTED: probable ubiquitin-... [more]
gi|1009144626|ref|XP_015889904.1|1.1e-8392.5PREDICTED: probable ubiquitin-... [more]
gi|702467481|ref|XP_010029738.1|1.4e-8392.5PREDICTED: probable ubiquitin-... [more]
gi|566170926|ref|XP_006383151.1|1.4e-8391.3UBIQUITIN-CONJUGATING ENZYME 1... [more]
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BLAST of Spo19642.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S3F9_SPIOL2.1e-89100.Uncharacterized protein OS=Spi... [more]
A0A0J8C7E0_BETVU3.1e-8595.6Uncharacterized protein OS=Bet... [more]
A0A059ARU5_EUCGR1.0e-8392.5Uncharacterized protein OS=Euc... [more]
B9MXK5_POPTR1.0e-8391.3UBIQUITIN-CONJUGATING ENZYME 1... [more]
I3SRG0_LOTJA5.0e-8391.3Uncharacterized protein OS=Lot... [more]
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BLAST of Spo19642.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UBC16_ARATH1.1e-8389.4Probable ubiquitin-conjugating... [more]
UBC15_ARATH3.3e-8085.7Ubiquitin-conjugating enzyme 1... [more]
UBC18_ARATH9.7e-8085.0Probable ubiquitin-conjugating... [more]
UBC17_ARATH1.6e-7478.8Probable ubiquitin-conjugating... [more]
UBE2W_DICDI2.1e-4255.8Probable ubiquitin-conjugating... [more]
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BLAST of Spo19642.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G75440.16.2e-8589.4ubiquitin-conjugating enzyme 1... [more]
AT1G45050.11.9e-8185.7Ubiquitin-conjugating enzyme f... [more]
AT5G42990.15.5e-8185.0ubiquitin-conjugating enzyme 1... [more]
AT4G36410.19.0e-7678.8ubiquitin-conjugating enzyme 1... [more]
AT5G41700.45.0e-1838.9ubiquitin conjugating enzyme 8[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 19..154
score: 1.4
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 18..137
score: 28
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 4..129
score: 9.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 6..126
score: 3.22
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..161
score: 4.2E
NoneNo IPR availablePANTHERPTHR24067:SF125UBIQUITIN-CONJUGATING ENZYME E2 18-RELATEDcoord: 1..161
score: 4.2E
NoneNo IPR availableSMARTSM00212ubc_7coord: 18..161
score: 1.7

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016874 ligase activity