Spo18846.1 (mRNA) | SpinachBase

Overview


Name	Spo18846.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	LOB domain protein 18
Location	chr2 : 47957553 .. 47962114 (+)
Sequence length	1248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTAAAGATTTGTCCTCCTACTTTCTTCTTCTTCTTCGTCTCCTCCTCTTTCTCTCTCCTCTTCTTCTCCTTCATCATCTTCTCCATTTCTCACAACCCCCCAATAAAAATAAAAATAAAAATAAAATCATCCCTAGAAAAACAAACCAACCCAATGAAACACTCACCTACTTTTACACCCGCCTCCTCACTTATATCACCCCTCAAAAAAATCATATAAGAACAACCCTAACAAATTCCTTTAAAAAAAATAAAAAATAAAAAGTTTGGTGTGATCATATTTCATATATCATAATGAGTTGTGCAAACCCTGGTGGTGGTAGTAGTAGTAGTAGTGGAGGAGGAGGGAGTGGTGTTGGTAGCGGTGGCGGTGGCGGGGGACCGTGTGGTGCTTGTAAGTTTTTGCGTAGGAAGTGTGTGGTTGGGTGTATATTTGCCCCGTATTTCGATTCGGAGCAAGGTGCGGCCCATTTTGCAGCGGTGCATAAGGTGTTTGGAGCAAGTAATGTGTCAAAGTTGTTGTTACACATTCCTGCTCATAAGAGGCTTGATGCTGTTGTTACAATTTGTTATGAGGCTCAAGCTAGGCTTCGTGACCCCGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTACCCCTCGTATTTCACCTATACTTCCTCTGTTCTTTAATACTTTTTTATACATATATATCTCATGAAATTAAACACAAAAAATTTAACGTGTTATGCTGATTTTGTAAAATTTGTTTCCTTTTTACATAAATCGATCAACCTAGCTAAATTGATTGAAATTCGAGTTATTTCGATGAATTAAGGTCATTCGTAGTACTACGTATTATCTTTGTTGTTTCATTCAAGCTTCATATGGGTTCAAAACTCGTTTTCATATAAGTTTATAACTCATTTGTGCACATTTATTAATTAGTTTAGCTGGTAAAATCTCGTGAGTTAACACACCATCACTTGAAATTTCACTTCAAAATTTTCTATGAATAAAAATATTAATTGTCGATGTTGCATGTATTAATGTTCAGTTGTCAAGAGAAAATGTGGCATTCACATTCAACCGACTAGTTTGTTCGACTTTGTTGAGATTTATGGTGGATTTATGTTTAGAAGATATATTCTTTTTCATTCTTATAATTTGATTTCTTGCTTGTTGAGATTATATTTCATTCTTAATTTTGAGGGAATTGTAATTAGAATTGAGATTCAACTTATTATAATCGAAATCCTAATTAATTATATATGTCCTTTTCTTCATACATTAAAACCTTAGAATAATTAAAAATGAGTGTATTGTCCTTGTTATTTTAGGTGACACACAGGTCACATTATGTTGAGGTTCATCTAACATATATCTTCGAATTAAATGCAACTTAAATATCACTTATAAGATATATCTATAAATATATATAAAACATTGAATAAGGAAAATGCACATAGAATGAATGACCAATTATATGGTCTTAATTATAATTATATTTCATATCAAGCATAATTTAGGTGTTCCACATAGTACCATTATTAAATGAGGAATAAACTACACTAAGTAACTTCTAAGCAACCTATACCTAGCTAGCTTAGCTATAGTTCAAACTATATATATTAATTATAAGTATACAAGTTCAATTCTAGTTAACCTTGACAATTAAGAGAATCATTAACTTAAGACTTAACCATAGAGGGAAATAATAAACTTCCACAATTCGAACATGTAATCAATATTACTTGCCCCGCTAAGCTAAACTTTCTATAACGAGGGATATTTTAATTGTTTAATTTAATTTCAAAAACATCGTGTAATTTGGTGACGGGAATTTACTGTAATGAGGGTAACGCTGTCAAAACGTGTTACCTCGAGGGAAGAGGAGATCGAGGGAATAATAATAATAATAATGATTGTGGTTAAAGGAAACAAGTATTCAACTGCGTTACTGAAATTGAGGGTACATTTGGATTGCCATAAAACAAAGGAAAATACAAGTAGTATGTTTGGAGGATCGAAAACTGCAGCTAGCAGCATTAGTAATATTTGTCTGGGATTCTGGTGTTAAAGGTTGGTTAGCCAATTTTTTTGTGCTACGTGAATTTAGCAGGGATTAAGGAATTGGTCGGTTTCTTCCTTCTTTTTTTTCTTCTTTTTATTTTTCTAATTTATGTTTTATAAATATTATTAATCTTATTAGTTTTGTTGGAAAAAGAGGTAACCTTAACCTTGTTTTATATATTTATACATTTTTTTTTAATGTTTGTTGGCTTACCAATTATCCCCCCCACATGCTTCATCAATGGTAAGTATGTAGGGACATTATGTGTCCATTTGACTACTAACTCAAAATTTTTCATCCCCAATTTTCTTGGTCTTGAGTATGAACTAAGGTAAGTAATTACCTTGATTTTATAAAATAATTCAATATTATTTTGTAATACTAGTATGGACTAGTTGATTTCTTTTATCGATAGATCAATCCAGAATAGATTATGGCCTTGTTCTGTTCACTGTATTTCAGTTATTTTATGACTAGTAAGGATAATTAGTTAAGATAATTGCTGATACGGGATAGATAAATTCAATTTGATATAAGGTTTATAGTAAGTTCATGTGAACATAATACGTAGTACAACCGTATTACTTTCTCCGTTCCTTGAATATTGCACCATTGTTGATTTTAATTACGCTTACGTGCATACTTTGACTCTTAATATATTGAATTATGTATAAGTAAAATTTATTAAAGAAATTATATTTAAAAAATATATATCGATATGAATCTAACAAGATCTCACATGACTACAATTTTTCTTAGGTAGGAATCACAAAAATGAACAAATGTCTAATGTGAATTGTGTAAAAAATAAGATGTTGCGATATTTATGGAACGGGGAAAGTATTAAAATTAGCATATTCTAGAAAAATATATAGGTTTAAATATGATAAGTTTATGAAAAATAAGTGTTACCCACGTGCAATTTACAAGTAGAATAAGTTTGATAAATTCTATGAGTAATAAGTTCAAATAAGTAAAAACAAAGTGAAAAAACGCGCTCCTTTAGCCTGTTCAATTGATCTAATACTTGTGCTTGTAGCAAATATTATAAATGTATGAGAGTAATTTTATATCGAACGAATAAGTTCAATTCAACACAGTTATATACTTCGTGTTAAAAAAATAAAAATGTTCATAATGGTTGTACTATTGTATCATTATATGAATATGCATACATGTTGCTTTTATCTATCAACTTTATATTGTTTCCCATAAGAGGTGGATCGATGATCAATTTGTTTAAGGGATCAAAGTACAATGTTAGCGTATTTATGCGTCCAAGTTAAAATAAATAATTTGTATAGATTTTCCGCAAAGTAATTGAGAAAGAGATTGAAAACAAAACATGTATCATATGATTAACTTGGAAGTATACTCCAACTAGAGTTTTTATCAAGATTCTATTTTAATTAATCAAGAATTGGATGCACATACTGACCTACATAACTCCTTGTCTGAATTAGCTATCCAGCTTATCATACATCAAAATTAACGTGGTTGAGAGTTTCTTCAAACACGTTGGCCTCATACAGTCTAGTCATACTTGTAAAGTTAGTTGTCGCATTATTCCAAATCCTAGTAATAAAGAAAATATAAAATCCCCTTAATTTATGAAAGTTTTTACTTTTTTTTCCGCGTCATTCTATATAATAATAAGTTGGGTTTAATCGTGAAATATAGTATTCTAACATTTCAATCCCTAAAATTAAAAATCTAACATTTCGAAAATGATTTACTTTGTATAAATGTTGCTTTTACTAGATTGGAGAAGTAAAATATTTGTGAAACTTATATTATATACAGCTTAGATAGTTTCTCTAGATTCTAATAGTCATGGTTATACTAAGTTTGTTATTCCGTAATAATTAATGTTTGTCTCTCCTTATATACAAGGTTGTAAATTTACAAGCGGAGCTCTCATACTTACAAGCACATCTCGTAAGCCTAGAAGTCCCAACACCACCGCCGCCACCACCCCAACCACTAATGCCGCCACCGCAACTATCAATCTCCGACCTTCCGTCAGCATCAACCGTGCCCGCCACCTATGACTTATCCTCACTATTTGACCCAATGGTTCAACCACTATGGGCAATGCAGCAGCAACAACAACAGCAACGAGGCCCAATGGACCAACGCCCATATGGATCGGGTGATAGAGGCCCAAACATTGGTCCTACCTCTAACATTGGAGGGGTTGATCTTCAAGCAGTGGCACGTGAGCTGCTTCATAGACATGGATCTCCAACTTATGGGCACATGCATGATCCATCACCTTCATCATCCATGTCTAAATGAGATAAATTGACTCCCATAATTAACAACAAGTACTTGACCCGAAACCGTTTTGAGATGGTTCAGATTAGAGAATTTGGGTTTACATCAGTACAATTTGGATAACTGATCTGCCCTTTGTCGTAATTATTATTGTTACTATTAATTTCTTTTCTTTATTTATCTTTTCTCTTGCCTTACTGAATATTTTGTTATATAAACG

mRNA sequence

GCTTTAAAGATTTGTCCTCCTACTTTCTTCTTCTTCTTCGTCTCCTCCTCTTTCTCTCTCCTCTTCTTCTCCTTCATCATCTTCTCCATTTCTCACAACCCCCCAATAAAAATAAAAATAAAAATAAAATCATCCCTAGAAAAACAAACCAACCCAATGAAACACTCACCTACTTTTACACCCGCCTCCTCACTTATATCACCCCTCAAAAAAATCATATAAGAACAACCCTAACAAATTCCTTTAAAAAAAATAAAAAATAAAAAGTTTGGTGTGATCATATTTCATATATCATAATGAGTTGTGCAAACCCTGGTGGTGGTAGTAGTAGTAGTAGTGGAGGAGGAGGGAGTGGTGTTGGTAGCGGTGGCGGTGGCGGGGGACCGTGTGGTGCTTGTAAGTTTTTGCGTAGGAAGTGTGTGGTTGGGTGTATATTTGCCCCGTATTTCGATTCGGAGCAAGGTGCGGCCCATTTTGCAGCGGTGCATAAGGTGTTTGGAGCAAGTAATGTGTCAAAGTTGTTGTTACACATTCCTGCTCATAAGAGGCTTGATGCTGTTGTTACAATTTGTTATGAGGCTCAAGCTAGGCTTCGTGACCCCGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTAAATTTACAAGCGGAGCTCTCATACTTACAAGCACATCTCGTAAGCCTAGAAGTCCCAACACCACCGCCGCCACCACCCCAACCACTAATGCCGCCACCGCAACTATCAATCTCCGACCTTCCGTCAGCATCAACCGTGCCCGCCACCTATGACTTATCCTCACTATTTGACCCAATGGTTCAACCACTATGGGCAATGCAGCAGCAACAACAACAGCAACGAGGCCCAATGGACCAACGCCCATATGGATCGGGTGATAGAGGCCCAAACATTGGTCCTACCTCTAACATTGGAGGGGTTGATCTTCAAGCAGTGGCACGTGAGCTGCTTCATAGACATGGATCTCCAACTTATGGGCACATGCATGATCCATCACCTTCATCATCCATGTCTAAATGAGATAAATTGACTCCCATAATTAACAACAAGTACTTGACCCGAAACCGTTTTGAGATGGTTCAGATTAGAGAATTTGGGTTTACATCAGTACAATTTGGATAACTGATCTGCCCTTTGTCGTAATTATTATTGTTACTATTAATTTCTTTTCTTTATTTATCTTTTCTCTTGCCTTACTGAATATTTTGTTATATAAACG

Coding sequence (CDS)

ATGAGTTGTGCAAACCCTGGTGGTGGTAGTAGTAGTAGTAGTGGAGGAGGAGGGAGTGGTGTTGGTAGCGGTGGCGGTGGCGGGGGACCGTGTGGTGCTTGTAAGTTTTTGCGTAGGAAGTGTGTGGTTGGGTGTATATTTGCCCCGTATTTCGATTCGGAGCAAGGTGCGGCCCATTTTGCAGCGGTGCATAAGGTGTTTGGAGCAAGTAATGTGTCAAAGTTGTTGTTACACATTCCTGCTCATAAGAGGCTTGATGCTGTTGTTACAATTTGTTATGAGGCTCAAGCTAGGCTTCGTGACCCCGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTAAATTTACAAGCGGAGCTCTCATACTTACAAGCACATCTCGTAAGCCTAGAAGTCCCAACACCACCGCCGCCACCACCCCAACCACTAATGCCGCCACCGCAACTATCAATCTCCGACCTTCCGTCAGCATCAACCGTGCCCGCCACCTATGACTTATCCTCACTATTTGACCCAATGGTTCAACCACTATGGGCAATGCAGCAGCAACAACAACAGCAACGAGGCCCAATGGACCAACGCCCATATGGATCGGGTGATAGAGGCCCAAACATTGGTCCTACCTCTAACATTGGAGGGGTTGATCTTCAAGCAGTGGCACGTGAGCTGCTTCATAGACATGGATCTCCAACTTATGGGCACATGCATGATCCATCACCTTCATCATCCATGTCTAAATGA

Protein sequence

MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMHDPSPSSSMSK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo18846	Spo18846	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo18846.1	Spo18846.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18846.1.exon.1	Spo18846.1.exon.1	exon
Spo18846.1.exon.2	Spo18846.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18846.1.utr5p.1	Spo18846.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18846.1.CDS.1	Spo18846.1.CDS.1	CDS
Spo18846.1.CDS.2	Spo18846.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo18846.1.utr3p.1	Spo18846.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo18846.1 vs. NCBI nr
Match: gi|902175531|gb|KNA08613.1| (hypothetical protein SOVF_161040 [Spinacia oleracea])

HSP 1 Score: 484.6 bits (1246), Expect = 1.100e-133
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60
           MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF
Sbjct: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60

Query: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120
           AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL
Sbjct: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120

Query: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180
           QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP
Sbjct: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180

Query: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240
           LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH
Sbjct: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240

Query: 241 DPSPSSSMSK 251
           DPSPSSSMSK
Sbjct: 241 DPSPSSSMSK 250

[Close]

BLAST of Spo18846.1 vs. NCBI nr
Match: gi|731361280|ref|XP_010692269.1| (PREDICTED: LOB domain-containing protein 18 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 414.8 bits (1065), Expect = 1.000e-112
Identity = 221/250 (88.40%), Postives = 225/250 (90.00%), Query Frame = 1


		  
Query: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60
           MSCANPG     S G GG G G GGG GGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF
Sbjct: 1   MSCANPGSSGGGSGGVGGGGSGCGGGSGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60

Query: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120
           AAVHKVFGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL
Sbjct: 61  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120

Query: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180
           QAEL+YLQAHL +LEVPTPPPPPPQPLMPPPQLSI+DLPSASTVPATYDLSSLFDPMVQP
Sbjct: 121 QAELTYLQAHLATLEVPTPPPPPPQPLMPPPQLSIADLPSASTVPATYDLSSLFDPMVQP 180

Query: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240
           LWAM  QQQQQRGPMDQR +GS DRGP IG     GG DLQAVARELLHRHGSPT GHMH
Sbjct: 181 LWAM-HQQQQQRGPMDQRVFGSTDRGPTIGS----GGGDLQAVARELLHRHGSPTIGHMH 240

Query: 241 DPSPSSSMSK 251
           DPSPSSSMSK
Sbjct: 241 DPSPSSSMSK 245

[Close]

BLAST of Spo18846.1 vs. NCBI nr
Match: gi|1009168699|ref|XP_015902801.1| (PREDICTED: LOB domain-containing protein 18-like [Ziziphus jujuba])

HSP 1 Score: 326.2 bits (835), Expect = 4.800e-86
Identity = 190/249 (76.31%), Postives = 203/249 (81.53%), Query Frame = 1


		  
Query: 4   ANPG--GGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFA 63
           ANP   GG  SSSG GG G GSGGGG GPCGACKFLRRKCV GCIFAPYFDSEQGAAHFA
Sbjct: 3   ANPSSSGGGGSSSGSGGCGGGSGGGG-GPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 62

Query: 64  AVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQ 123
           AVHKVFGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQ
Sbjct: 63  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQ 122

Query: 124 AELSYLQAHLVSLEVPT-PPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 183
           AELSYLQAHL +LE+P+ PPPPPP  L+ PP L+I+DLPSAS+VP TYDLSSLF+PMVQP
Sbjct: 123 AELSYLQAHLATLELPSPPPPPPPTTLVTPPPLTIADLPSASSVPTTYDLSSLFEPMVQP 182

Query: 184 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 243
            W MQQ+      PMD R +GS   G + G T   GG DL A+ARELLHRHGSP +G M 
Sbjct: 183 -WVMQQR------PMDPRQFGS-STGSSSG-TGGSGGGDLHALARELLHRHGSPPHGSMT 241

Query: 244 DPSPSSSMS 250
            P  SSS S
Sbjct: 243 CPDASSSPS 241

[Close]

BLAST of Spo18846.1 vs. NCBI nr
Match: gi|224127394|ref|XP_002320063.1| (LOB domain protein 18 [Populus trichocarpa])

HSP 1 Score: 325.9 bits (834), Expect = 6.300e-86
Identity = 185/246 (75.20%), Postives = 198/246 (80.49%), Query Frame = 1


		  
Query: 7   GGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKV 66
           GGGS   SGGGG G G GGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKV
Sbjct: 14  GGGS---SGGGGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKV 73

Query: 67  FGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 126
           FGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY
Sbjct: 74  FGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 133

Query: 127 LQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQ 186
           LQAHL +LEVP+PPPPPP  L+ PP LSI+DLPSAS++PA YDLS LFDPM+QP W+  Q
Sbjct: 134 LQAHLAALEVPSPPPPPPPTLVTPPPLSIADLPSASSIPAAYDLSCLFDPMMQPSWSNMQ 193

Query: 187 QQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHM--HDPSP 246
            Q+Q    MD R +G        G +S  GG DLQA+ARELLHR GSP  G M   D   
Sbjct: 194 PQRQ----MDIRQFGGS------GGSSGTGGGDLQALARELLHRRGSPPPGFMSCSDTLA 246

Query: 247 SSSMSK 251
           S S+SK
Sbjct: 254 SPSISK 246

[Close]

BLAST of Spo18846.1 vs. NCBI nr
Match: gi|225453923|ref|XP_002279521.1| (PREDICTED: LOB domain-containing protein 18 [Vitis vinifera])

HSP 1 Score: 321.6 bits (823), Expect = 1.200e-84
Identity = 186/248 (75.00%), Postives = 200/248 (80.65%), Query Frame = 1


		  
Query: 10  SSSSSGGGGSGVGS---GGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKV 69
           SSS  GGGG G GS   GGGGGGPCGACKFLRRKCVVGCIFAPYFD EQGAAHFAAVHKV
Sbjct: 6   SSSGGGGGGGGGGSTSGGGGGGGPCGACKFLRRKCVVGCIFAPYFDPEQGAAHFAAVHKV 65

Query: 70  FGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 129
           FGASNVSKLL HIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY
Sbjct: 66  FGASNVSKLLGHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 125

Query: 130 LQAHLVSLEVPTPPPPPPQP---LMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP-LW 189
           LQAHL +LE+P+PPPPPP P   ++ PP LSISDLPSAS++P TYDLSSLFDPMVQP  W
Sbjct: 126 LQAHLATLELPSPPPPPPPPPPVMVTPPSLSISDLPSASSMPPTYDLSSLFDPMVQPSSW 185

Query: 190 AMQQQQQQQRGPMDQRPYGSGDRGPNIGPTS--NIGGVDLQAVARELLHRHGSPTYGHMH 249
            MQQ +Q     +D R +G G RGP   P++    GG DLQA+ARELLHRH S   GH+ 
Sbjct: 186 PMQQHRQ-----IDPRQFG-GSRGPTDLPSTAGGSGGGDLQALARELLHRHSSALGGHV- 245

[Close]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPJ9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161040 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 7.400e-134
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60
           MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF
Sbjct: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60

Query: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120
           AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL
Sbjct: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120

Query: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180
           QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP
Sbjct: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180

Query: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240
           LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH
Sbjct: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240

Query: 241 DPSPSSSMSK 251
           DPSPSSSMSK
Sbjct: 241 DPSPSSSMSK 250

[Close]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ82_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g019330 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 7.200e-113
Identity = 221/250 (88.40%), Postives = 225/250 (90.00%), Query Frame = 1


		  
Query: 1   MSCANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60
           MSCANPG     S G GG G G GGG GGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF
Sbjct: 1   MSCANPGSSGGGSGGVGGGGSGCGGGSGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHF 60

Query: 61  AAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120
           AAVHKVFGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL
Sbjct: 61  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120

Query: 121 QAELSYLQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP 180
           QAEL+YLQAHL +LEVPTPPPPPPQPLMPPPQLSI+DLPSASTVPATYDLSSLFDPMVQP
Sbjct: 121 QAELTYLQAHLATLEVPTPPPPPPQPLMPPPQLSIADLPSASTVPATYDLSSLFDPMVQP 180

Query: 181 LWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHMH 240
           LWAM  QQQQQRGPMDQR +GS DRGP IG     GG DLQAVARELLHRHGSPT GHMH
Sbjct: 181 LWAM-HQQQQQRGPMDQRVFGSTDRGPTIGS----GGGDLQAVARELLHRHGSPTIGHMH 240

Query: 241 DPSPSSSMSK 251
           DPSPSSSMSK
Sbjct: 241 DPSPSSSMSK 245

[Close]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Match: B9IC05_POPTR (LOB domain protein 18 OS=Populus trichocarpa GN=POPTR_0014s06600g PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.400e-86
Identity = 185/246 (75.20%), Postives = 198/246 (80.49%), Query Frame = 1


		  
Query: 7   GGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKV 66
           GGGS   SGGGG G G GGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKV
Sbjct: 14  GGGS---SGGGGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKV 73

Query: 67  FGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 126
           FGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY
Sbjct: 74  FGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 133

Query: 127 LQAHLVSLEVPTPPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQ 186
           LQAHL +LEVP+PPPPPP  L+ PP LSI+DLPSAS++PA YDLS LFDPM+QP W+  Q
Sbjct: 134 LQAHLAALEVPSPPPPPPPTLVTPPPLSIADLPSASSIPAAYDLSCLFDPMMQPSWSNMQ 193

Query: 187 QQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHM--HDPSP 246
            Q+Q    MD R +G        G +S  GG DLQA+ARELLHR GSP  G M   D   
Sbjct: 194 PQRQ----MDIRQFGGS------GGSSGTGGGDLQALARELLHRRGSPPPGFMSCSDTLA 246

Query: 247 SSSMSK 251
           S S+SK
Sbjct: 254 SPSISK 246

[Close]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Match: F6I373_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00830 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.300e-85
Identity = 186/248 (75.00%), Postives = 200/248 (80.65%), Query Frame = 1


		  
Query: 10  SSSSSGGGGSGVGS---GGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKV 69
           SSS  GGGG G GS   GGGGGGPCGACKFLRRKCVVGCIFAPYFD EQGAAHFAAVHKV
Sbjct: 6   SSSGGGGGGGGGGSTSGGGGGGGPCGACKFLRRKCVVGCIFAPYFDPEQGAAHFAAVHKV 65

Query: 70  FGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 129
           FGASNVSKLL HIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY
Sbjct: 66  FGASNVSKLLGHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSY 125

Query: 130 LQAHLVSLEVPTPPPPPPQP---LMPPPQLSISDLPSASTVPATYDLSSLFDPMVQP-LW 189
           LQAHL +LE+P+PPPPPP P   ++ PP LSISDLPSAS++P TYDLSSLFDPMVQP  W
Sbjct: 126 LQAHLATLELPSPPPPPPPPPPVMVTPPSLSISDLPSASSMPPTYDLSSLFDPMVQPSSW 185

Query: 190 AMQQQQQQQRGPMDQRPYGSGDRGPNIGPTS--NIGGVDLQAVARELLHRHGSPTYGHMH 249
            MQQ +Q     +D R +G G RGP   P++    GG DLQA+ARELLHRH S   GH+ 
Sbjct: 186 PMQQHRQ-----IDPRQFG-GSRGPTDLPSTAGGSGGGDLQALARELLHRHSSALGGHV- 245

[Close]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Match: B9RDE1_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1612280 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.000e-82
Identity = 181/250 (72.40%), Postives = 193/250 (77.20%), Query Frame = 1


		  
Query: 4   ANPGGGSSSSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAV 63
           ANP    S S G GG G G     GGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAV
Sbjct: 5   ANP----SCSGGSGGVGGGGSSSSGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAV 64

Query: 64  HKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAE 123
           HKVFGASNVSKLLLHIP HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAE
Sbjct: 65  HKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAE 124

Query: 124 LSYLQAHLVSLEVPT-PPPPPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQ--P 183
           LSYLQAHL +LE+P+ PPPPPPQ L+PPP LSI+DLPSAS+VPATYDLSSLFDPM Q  P
Sbjct: 125 LSYLQAHLATLELPSPPPPPPPQSLVPPPPLSIADLPSASSVPATYDLSSLFDPMTQPSP 184

Query: 184 LWAMQQQQQQQRGPMDQRPYGSGDR-GPNIGPTSNIGGVDLQAVARELLHRHGSPTYGHM 243
            WAMQQ+Q      MD R +G G   G +       GG DL ++ARELLHRH SP  G +
Sbjct: 185 SWAMQQRQ------MDPRQFGGGSSLGSSSATIGGCGGGDLHSLARELLHRHASPPRGSV 244

Query: 244 HDPSPSSSMS 250
                 SS S
Sbjct: 245 PCSGTLSSPS 244

[Close]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 4.900e-70
Identity = 167/258 (64.73%), Postives = 187/258 (72.48%), Query Frame = 1


		  
Query: 7   GGGSSSSSGGGGSGVG--SGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVH 66
           GGG     GGG SG G  SGGGGGGPCGACKFLRRKCV GCIFAPYFDSEQG+A+FAAVH
Sbjct: 12  GGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVH 71

Query: 67  KVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAEL 126
           KVFGASNVSKLLLHIP H+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQVVNLQAE+
Sbjct: 72  KVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEV 131

Query: 127 SYLQAHLVSLEVPTP-----PPPPPQPLM--PPPQLSISDLP-SASTVPATYDLSSLFDP 186
           SYLQAHL SLE+P P     P P PQPL   PPP L+I+DLP S S +P+TYDL+S+FD 
Sbjct: 132 SYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQ 191

Query: 187 MV-QPLWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGV---DLQAVARELLHRHG 246
                 WA QQ++     P  Q    S      +G    +GG    DLQA+A ELLHR G
Sbjct: 192 TTSSSAWATQQRRFID--PRHQYGVSSSSSSVAVG----LGGENSHDLQALAHELLHRQG 251

Query: 247 SPTYGHMHDPSPSSSMSK 251
           SP      D SPS +MS+
Sbjct: 252 SPPPA-ATDHSPSRTMSR 262

[Close]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.200e-62
Identity = 148/241 (61.41%), Postives = 171/241 (70.95%), Query Frame = 1


		  
Query: 12  SSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASN 71
           SSSG   S   S GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASN
Sbjct: 2   SSSGNPSS---SSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASN 61

Query: 72  VSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHL 131
           VSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQVV+LQ ELSYLQAHL
Sbjct: 62  VSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHL 121

Query: 132 VSLEVPTPPPP--PPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQQQQ 191
            +LE+P P PP  P         LSI+DLP+ S  P+ YDLSS+F+P++   WAMQQQ  
Sbjct: 122 ATLELPQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWAMQQQ-- 181

Query: 192 QQRGPMDQRPYGSGDRGPNIGPTSNI-GGVDLQAVARELLHRHGSPTYGHMHDPSPSSSM 250
                   RP    D    +  +SN+ GG +LQA+ARE +H    P       PSP +S 
Sbjct: 182 -------PRP---SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPA-----QPSPGTSG 220

[Close]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 3.000e-43
Identity = 113/213 (53.05%), Postives = 140/213 (65.73%), Query Frame = 1


		  
Query: 22  GSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPA 81
           GS  G GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASN SKLL+ IPA
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 82  HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPP 141
            +RLDAVVT+ YEA ARLRDPVYGCV HIFALQ QV+NLQAEL+Y+Q  L +L+    PP
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQ--GLPP 122

Query: 142 PPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQQQQQQRGPMDQRPYG 201
           P  Q        S S++P  S+V +  ++SS    +  P  + QQ+Q+Q +  ++  P  
Sbjct: 123 PNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEV-PTE 182

Query: 202 SGDRGPNIG---PTSNIGGVDLQAVARELLHRH 232
           S D     G   P    G  DL A+ARE   ++
Sbjct: 183 SVDLSTFFGLENPVDEDG--DLNALAREFFTKY 208

[Close]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.100e-42
Identity = 89/129 (68.99%), Postives = 105/129 (81.40%), Query Frame = 1


		  
Query: 22  GSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPA 81
           G G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +P 
Sbjct: 8   GGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPL 67

Query: 82  HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPP 141
           HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ QV+NLQAEL+++QA L +++    P 
Sbjct: 68  HKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ--RFPL 127

Query: 142 PPPQPLMPP 151
             PQ + PP
Sbjct: 128 QSPQQMQPP 134

[Close]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.400e-37
Identity = 79/124 (63.71%), Postives = 90/124 (72.58%), Query Frame = 1


		  
Query: 23  SGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPAH 82
           S    G PCGACKFLRRKC  GC+FAPYF  EQGA+HFAA+HKVFGASN SKLL H+P  
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 83  KRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPPP 142
            R +A +TI YEAQARL+DP+YGCV+HIFALQQQVVNLQAEL  L+       +    P 
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 143 PPQP 147
              P
Sbjct: 124 SENP 127

[Close]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Match: AT2G45420.1 (LOB domain-containing protein 18)

HSP 1 Score: 265.8 bits (678), Expect = 2.700e-71
Identity = 167/258 (64.73%), Postives = 187/258 (72.48%), Query Frame = 1


		  
Query: 7   GGGSSSSSGGGGSGVG--SGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVH 66
           GGG     GGG SG G  SGGGGGGPCGACKFLRRKCV GCIFAPYFDSEQG+A+FAAVH
Sbjct: 12  GGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVH 71

Query: 67  KVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAEL 126
           KVFGASNVSKLLLHIP H+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQVVNLQAE+
Sbjct: 72  KVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEV 131

Query: 127 SYLQAHLVSLEVPTP-----PPPPPQPLM--PPPQLSISDLP-SASTVPATYDLSSLFDP 186
           SYLQAHL SLE+P P     P P PQPL   PPP L+I+DLP S S +P+TYDL+S+FD 
Sbjct: 132 SYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQ 191

Query: 187 MV-QPLWAMQQQQQQQRGPMDQRPYGSGDRGPNIGPTSNIGGV---DLQAVARELLHRHG 246
                 WA QQ++     P  Q    S      +G    +GG    DLQA+A ELLHR G
Sbjct: 192 TTSSSAWATQQRRFID--PRHQYGVSSSSSSVAVG----LGGENSHDLQALAHELLHRQG 251

Query: 247 SPTYGHMHDPSPSSSMSK 251
           SP      D SPS +MS+
Sbjct: 252 SPPPA-ATDHSPSRTMSR 262

[Close]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 240.4 bits (612), Expect = 1.200e-63
Identity = 148/241 (61.41%), Postives = 171/241 (70.95%), Query Frame = 1


		  
Query: 12  SSSGGGGSGVGSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASN 71
           SSSG   S   S GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASN
Sbjct: 2   SSSGNPSS---SSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASN 61

Query: 72  VSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHL 131
           VSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQVV+LQ ELSYLQAHL
Sbjct: 62  VSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHL 121

Query: 132 VSLEVPTPPPP--PPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQQQQ 191
            +LE+P P PP  P         LSI+DLP+ S  P+ YDLSS+F+P++   WAMQQQ  
Sbjct: 122 ATLELPQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWAMQQQ-- 181

Query: 192 QQRGPMDQRPYGSGDRGPNIGPTSNI-GGVDLQAVARELLHRHGSPTYGHMHDPSPSSSM 250
                   RP    D    +  +SN+ GG +LQA+ARE +H    P       PSP +S 
Sbjct: 182 -------PRP---SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPA-----QPSPGTSG 220

[Close]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Match: AT4G00210.1 (LOB domain-containing protein 31)

HSP 1 Score: 176.8 bits (447), Expect = 1.700e-44
Identity = 113/213 (53.05%), Postives = 140/213 (65.73%), Query Frame = 1


		  
Query: 22  GSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPA 81
           GS  G GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASN SKLL+ IPA
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 82  HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPP 141
            +RLDAVVT+ YEA ARLRDPVYGCV HIFALQ QV+NLQAEL+Y+Q  L +L+    PP
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQ--GLPP 122

Query: 142 PPPQPLMPPPQLSISDLPSASTVPATYDLSSLFDPMVQPLWAMQQQQQQQRGPMDQRPYG 201
           P  Q        S S++P  S+V +  ++SS    +  P  + QQ+Q+Q +  ++  P  
Sbjct: 123 PNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEV-PTE 182

Query: 202 SGDRGPNIG---PTSNIGGVDLQAVARELLHRH 232
           S D     G   P    G  DL A+ARE   ++
Sbjct: 183 SVDLSTFFGLENPVDEDG--DLNALAREFFTKY 208

[Close]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Match: AT2G45410.1 (LOB domain-containing protein 19)

HSP 1 Score: 174.9 bits (442), Expect = 6.400e-44
Identity = 89/129 (68.99%), Postives = 105/129 (81.40%), Query Frame = 1


		  
Query: 22  GSGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPA 81
           G G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +P 
Sbjct: 8   GGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPL 67

Query: 82  HKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPP 141
           HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ QV+NLQAEL+++QA L +++    P 
Sbjct: 68  HKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ--RFPL 127

Query: 142 PPPQPLMPP 151
             PQ + PP
Sbjct: 128 QSPQQMQPP 134

[Close]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Match: AT3G58190.1 (lateral organ boundaries-domain 29)

HSP 1 Score: 156.0 bits (393), Expect = 3.100e-38
Identity = 79/124 (63.71%), Postives = 90/124 (72.58%), Query Frame = 1


		  
Query: 23  SGGGGGGPCGACKFLRRKCVVGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPAH 82
           S    G PCGACKFLRRKC  GC+FAPYF  EQGA+HFAA+HKVFGASN SKLL H+P  
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 83  KRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLVSLEVPTPPPP 142
            R +A +TI YEAQARL+DP+YGCV+HIFALQQQVVNLQAEL  L+       +    P 
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 143 PPQP 147
              P
Sbjct: 124 SENP 127

The following BLAST results are available for this feature:

BLAST of Spo18846.1 vs. NCBI nr
BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
BLAST of Spo18846.1 vs. TAIR (Arabidopsis)

BLAST of Spo18846.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902175531\|gb\|KNA08613.1\|	1.1e-133	100.	hypothetical protein SOVF_1610...	[more]
gi\|731361280\|ref\|XP_010692269.1\|	1.0e-112	88.4	PREDICTED: LOB domain-containi...	[more]
gi\|1009168699\|ref\|XP_015902801.1\|	4.8e-86	76.3	PREDICTED: LOB domain-containi...	[more]
gi\|224127394\|ref\|XP_002320063.1\|	6.3e-86	75.2	LOB domain protein 18 [Populus...	[more]
gi\|225453923\|ref\|XP_002279521.1\|	1.2e-84	75.0	PREDICTED: LOB domain-containi...	[more]

BLAST of Spo18846.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPJ9_SPIOL	7.4e-134	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BJ82_BETVU	7.2e-113	88.4	Uncharacterized protein OS=Bet...	[more]
B9IC05_POPTR	4.4e-86	75.2	LOB domain protein 18 OS=Popul...	[more]
F6I373_VITVI	8.3e-85	75.0	Putative uncharacterized prote...	[more]
B9RDE1_RICCO	1.0e-82	72.4	LOB domain-containing protein,...	[more]

BLAST of Spo18846.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
LBD18_ARATH	4.9e-70	64.7	LOB domain-containing protein ...	[more]
LBD30_ARATH	2.2e-62	61.4	LOB domain-containing protein ...	[more]
LBD31_ARATH	3.0e-43	53.0	LOB domain-containing protein ...	[more]
LBD19_ARATH	1.1e-42	68.9	LOB domain-containing protein ...	[more]
LBD29_ARATH	5.4e-37	63.7	LOB domain-containing protein ...	[more]

BLAST of Spo18846.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G45420.1	2.7e-71	64.7	LOB domain-containing protein ...	[more]
AT4G00220.1	1.2e-63	61.4	Lateral organ boundaries (LOB)...	[more]
AT4G00210.1	1.7e-44	53.0	LOB domain-containing protein ...	[more]
AT2G45410.1	6.4e-44	68.9	LOB domain-containing protein ...	[more]
AT3G58190.1	3.1e-38	63.7	lateral organ boundaries-domai...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 30..128 score: 3.8
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 29..131 score: 22
None	No IPR available	PANTHER	PTHR31529	FAMILY NOT NAMED	coord: 3..238 score: 1.2E
None	No IPR available	PANTHER	PTHR31529:SF3	LOB DOMAIN-CONTAINING PROTEIN 18-RELATED	coord: 3..238 score: 1.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010199	organ boundary specification between lateral organs and the meristem
biological_process	GO:0010089	xylem development