Spo18618.1 (mRNA)

Overview
NameSpo18618.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_05167 : 21 .. 5636 (+)
Sequence length1041
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCAGTAATTTTTCTGGAGCAGGTCTTAGTTCTGGAACATACCATGATTGTTAGTTGACCTTGGGATCCTAATGGAAGTTTGGATGAGATAAACTGCAGTCCCNCCCCCCCCCCCTCTCCCCGTGTATCCATGATACGATTGTTATCTTTTGTTACCTTTCTTTCTGTGAGTGCCTTTGTCTTTGATCCCGAGGTGGTTTGTATATGTTTGTACTATACTTGATATGAGCTTTCTCAAAATACTTCAACATGTATACTATTTTTGCTGATTAGTAAATTTATTCGACTATGACAAGGTTATGTGGTTGCTCAAGGAAGACCAATGAGAGAGGATCATGGCGATCGCCTTCCTTGCTGTGGTATTGGTTGTGGCTGGTTCTTGTAATGTCTCGCTCCCTTTCCCTTTGTTTCCCTCTGAGTTCATCCTTTGATTCGTGTTCGCTTCACTAAATAAGAATTAACTCACTTGAATACACATTAATGAGAGCTTCTAGGTGGTTGAATGGTGAAATAGAGAACAGAATATTTATGTATGAACTAATGGCCCATGAATGAAATCAATTGTTGTGTTAGTAATATAAAATCAGTCCACTAAGTGCCTGATTGGTCAATTTTCTAAAATAAGTGCTCAGTTGGTTGAATAGTCTTTGTAACAAGAAAAGAGAACATCAACAACCGCCTACTCAGTCACTAAGCTGAATTTTGGTATTTTCCTTATCCATGGGTCATGTCTCATAACATACATCCTCTCTCCATTCTTTAACATTCTTGTAACTTATTGTAGACTATTGTTTCTAGGAAAATGTGAAAATGGGGAATGGGGTGTAAGAAAAAGATAGATAAAGTAAGAGGGGACGGGTGTATAAAGAAGGTGGAAAGGTCTAAATATTATAGGGAATAGGGGTAACCGGGTAAGATGGTAAAATGTAAACTGCAAAAAGTAGAATAAAATAGGATTAGTACATTATTAAACACCCCAAGACGGGGAAGTAAATAGAACATTAAAGAACGGAGATAGAATTTGCTAAGCTTTGTCCAATACTAAAACGGAAGATGAAATAGGGAAGGATTTAAGAGAGCCTAAAACTAGTGCCCCCATATCACACCTTCCTGATCATTCACATAATAACATAAAGTGTTTTAATTTCTCCAATTGCAAAAAATAGGTCTCGGTTTCAATGGTGCTTATTAATTGTATTCTTTTGTTTGAAGGTTCATAATCGGGTTCTTCCTTGGTGGTATCCCTTGGTATATCGGGGCATTTTATCTGGTTTGTTGCAGAACTGATGTCGAACAAAGAGAGAAGCCAGGATATATTGCCTGTACAGTTGGTGTAAGTTTTGTCTCTCTTGCCTTGCCTCTTAATCCGTTTACTCAGTTCCATCATACATCTACTATATCTTCATCTTTTCAAATTTTTAGTAGATGATGAGTAATTTTGATTCCGTGAGAAGAAAGTATTTCCTTGTTGCTGCTTGTGCCTTGTGGAGTGACGATTCTTCTGAACATATGATCATTATACAGCGCATTGTCGGTTTTTGGTTAAGAAGTAGAGGAAATAGAAAATAGGAGTTGTTCATGTTGGAGAGAAATGTGCGGCTGAAAGTCCTTTCCCTACTATGGAAGTTTGATGATCTACTTGTGCTATGAGCTTTCATTAAAGTATTGGGAGAGCAAGTTTCATGAAAAGCCTATAGCTGTTTTGTGTTTAAACCAAAACTCTAAAGTGTTTAGGATTAGAATATTTGACCAGAACTCTATTTTGAGAACAGGGCTTTATTCTTAGGACGTGCTTGGAATAAGGGTTCAGTTAAACGGCTACATCCATTTGTCCATTGTGGAAACTACCGTGGATCTTAAGCTGTTATTTATAATAGTTAAAGAGGGTAGAAATCATCCCATGTTGCTGGTTAATAGGTTCTCCTACCGTCTCCTATAGTCGTAATTTACTCAGGTCATGAGGGTAAAGTGTTCTTTCACCAAGTTAACAACCATCAATATCATGCAAAATAAGAGCACTTATACCAAAGGTAAGGAGTAGTAAGGGCGAACTTAAGTTAATCTTCAAGGTATTTTCAAGATGCAAGTACGAGAAAAACTTGACCATTCATCATCTATTTTGATTTCCACAAGCAACTGCTTTAGGGAGCGTTATATTCACCTTTAAAAAATAAGTTAAGTTCAGATAAGTTCCAATAATTTCGGATAAGTTAAGATAAGCTCCAATAAGTTTGGATAATTTCAGATAAGTTCCAATAAGTTCGGATAAATTCAGATAAGTTACAATTAGGTCTAATAAATTTCAATATTATTAATATAATAATAATAATAATTATTACTCCATATGTCCCACATTACTTGTCACACTTTCCTTTTTCTTCCGTCTCAGATTACTTGTTACACTTTTAAATTAGGAATGACCCCACAATTATTATATTGTCTCTCTCTTCTCACTAAAAAAAAGTTTGCTCCCCACTCTCTCTCATTCAATTTTAAAATACCCCACTAACTACTATCACATCTATTTTTTCAATAAAATAACAACTGATAACCAAATAATCACTTATCACCTAAAACTTTATGCAAATGTAAGTGTAACGAGTAATGTGGGACGGAGGGAGTATTGTTATTTTGATTCTTATTGTTATATCATTATTATTATTATGATATTACAATTATAATTATAAATAACAAGATACGATATTAACTCGAACCTATAAGAACCCAAACCCGACGAAAATCGACCCGTTTCATTCCGCTACCCGATTAACCGGATCAGACATGAACATGACCTGATATGATTCCCGATCTGACAACCCAATCCGACATTACCCAATCCCATTCTATATGATCCCGAACAGTAAAAACCCGAATCAATTTTTAACCGAACCCGTTTCAACCCGGACCTGTTAAAAAGCGGAATCGTTTCAACCCGAACCCGCTTAAACTTGGGCCCATTTCAACCCGTACCGTATAAATCCAAACCCGTTCAAACTCGGACCTTTTCAACCCGGACCAGTATAACCCCTGACGCGTTTCAATTATTATTATTATTTATTATTTTATTATTTTATTTGAAGTATTATTTTTATTAATATTATTATTTTATTATTAATATTTATTATTATTATTATTATTATTATTATTTATTTTTATTATTTTTATTATTATTTATTATTTCCTCCGTTTGGAAATACTCACAACGGTGGTCACTCTCACGCATACGAATGCACAATTTTGATCGTTAGTATCTTGAATTTTGTTCAAGCAAAAATTATAAAAAGTTGATATTTTGAAAATACGCATTGAGACGATTTAGACGAATCTAACAAGACCCCATATGACTATGTTTTATCTGACATAGAACTTACCAAGAATAGTCAAGTAGAATATGTGAATAGTGTAAAAAGTTCAAACGTTGCGAACTTTTCTAAACGGAGGAAGTATTATTATTTATTATTATTGTAAATTATTTTCATTATTGTTATTTATTTATAATAATAATAAGTTCCAGTCAGGTCTAATAAGGTCAAAGCAGGTTTGATCAACTCCAATAAGTTCAGATAAGTTCCGATAAATTCCAACAAGTTTAGATAAGTTAAGATTAGATAAACTTAGGTCAGATAAGTTGAATAGAACACATGCTTAGTATCTTTCTTGTGCTCTTTTTACTGTTGTACAGTGCGACTAGCACACTATTTCTATACTTCATAGGGGGAGCCATGGTTTTCCACCAATTCTGTTTACTTTTATTTCACGGTGTCATCTTTCATAAGTAACATAACCGCACTTGTTGAATTTTCATGATCCATAATTTTTATTGATTCTTTATGCAAAATGAGTTTTTTTTATTAACCTGAAAGGTCCACTCACTACTGAATCACTGGTGACTCTGTTGGCAAATGTTATACAATTATAATGGACTAGATTGTCTCATGGTAGAACTTTTTAGCTGTTAAGTAGCAGAGAACTAATTTCTTCTCAATCTGTCATCTGACGAGTTTTGAACTTTTAAGAACTTTGGTGTTTTAGCTGTTAAGTAGCATACTTCAGACAATCGGACCCCCTTAAACCCACCTCCTGGCTCCTGCCACATATAACCCCGTGGTTTATACTTTGGCAAATGAGTTTTTAATAGGATATTGTGAAAGAATATTTTAGATCTTTAATGCTTCTTTTATAGGGTTTTGTATTGTTGCTCATCAAAATATATCACAAAAGTTGTACGCTGTATCAAGTATTAAATTTAGTACAATATGTAAGGAACGAGCTTACTGCTTACCAGATAGCTTCATGCAAATACTCGCTCCGTCCCTCAATACTCGCTCCGCTTTCCTGATAAAGCCGTATCTTAATATTCACCTCGTTTCTATAAATGACATACTTTTACTATTATAATATCATTTCTCTTACTTAACTATGGATCCACATATATTCTTATTTCCTAACAAAAACATTAAAAAATTCAACTCTCACCCCACCCCCACCAACACCCCTTTAGTTGACATACTTCCCACTAACTATATTAGAAAAATCCACACTATCAACTACCACCTAATAAATTAATAAGTCAACTAAGTTACCTAAAACTTTGTGCTGGTCAAACCGTGGCGAGTAAGGGACAGAGGGAGTACTAGAGAACTGATTCCAATAAATAGCCCTGAGTATGATATGATTTTTCTCCCCCTAGTGTTCCAGTTCTATTGGCAGTTCTTACTATATTCTTGAAGGTGTACAACTTAACATGGTTTTATGGACCTTCACTAGCCGATTCCTTAGGTATCTTTACTGTCTGTGGAAACTTCTTTGATGCTTAAAGGGTGAACAATCATGAACGATGTTTTTATATATGCATTTATTTAGAGCCGCATCACGTTAGTTACGGCCTCAAATGTTTATTTTAGAACCATGTTTGTTAGCTATTATTTGATTCTTAAAATTAGGCTTGTGATGCAGTTATTGTATCCAAGAAGATGAGACCTTAAACAATTTAACATGGGTTAATTAATTAACACAATCTGGAAGCAGTCTTTACTCATAACTCACTTTGCGCTGATATTTTGTGCTGATTTTGCAGACTGTCGTGGCTATTATAGCCACTGTTTTCGGTGTGGCAAAATTTAATTACTGAGTATCCTTGCGCATGGAAAAGAAACCCGTGGGTATACATGTGCATTTGCTTGTGAGTCGTTGAGCAGTTTTTCAAGTTAAGGAGAGGTTCCAATAGTTTGTTGTACTAGTGCCTAAAGTGATTAGACATATAAATAATCTTTGTTGTGAATCTTTTTCTGTATATAAACTTGTTTACAACGATTTGTGTCAGTAGAACTAAGCATTAAGCATTTGTACGTTTGTATAAAATCTTGTGTATTTGATCACATGAATTATATCATAAAACTGGGATTCTATGTCAGCAGCCATTGTAGCTTGATACTCCATCATGTTATTCTCAAATCTGGTTACATTTACGCATTGGCGGATGGCGGATGGCGGATGTTGCTGCATCAAGCTCCAGCAGCATCTTGCTGCACAAACCCAATTGCCTGATTTCAGTTTCTCTATTTATATCAAACTACTAATGCTGTTATGCTACGTCTCAGCTCTCTCGATTTACC

mRNA sequence

AACCAGTAATTTTTCTGGAGCAGGTCTTAGTTCTGGAACATACCATGATTGTTAGTTGACCTTGGGATCCTAATGGAAGTTTGGATGAGATAAACTGCAGTCCCNCCCCCCCCCCCTCTCCCCGTGTATCCATGATACGATTGTTATCTTTTGTTACCTTTCTTTCTGTGAGTGCCTTTGTCTTTGATCCCGAGGTGGTTTGTATATGTTTGTACTATACTTGATATGAGCTTTCTCAAAATACTTCAACATGTATACTATTTTTGCTGATTAGTAAATTTATTCGACTATGACAAGGTTATGTGGTTGCTCAAGGAAGACCAATGAGAGAGGATCATGGCGATCGCCTTCCTTGCTGTGGTATTGGTTGTGGCTGGTTCTTGTTCATAATCGGGTTCTTCCTTGGTGGTATCCCTTGGTATATCGGGGCATTTTATCTGGTTTGTTGCAGAACTGATGTCGAACAAAGAGAGAAGCCAGGATATATTGCCTGTACAGTTGGTACTGTCGTGGCTATTATAGCCACTGTTTTCGGTGTGGCAAAATTTAATTACTGAGTATCCTTGCGCATGGAAAAGAAACCCGTGGGTATACATGTGCATTTGCTTGTGAGTCGTTGAGCAGTTTTTCAAGTTAAGGAGAGGTTCCAATAGTTTGTTGTACTAGTGCCTAAAGTGATTAGACATATAAATAATCTTTGTTGTGAATCTTTTTCTGTATATAAACTTGTTTACAACGATTTGTGTCAGTAGAACTAAGCATTAAGCATTTGTACGTTTGTATAAAATCTTGTGTATTTGATCACATGAATTATATCATAAAACTGGGATTCTATGTCAGCAGCCATTGTAGCTTGATACTCCATCATGTTATTCTCAAATCTGGTTACATTTACGCATTGGCGGATGGCGGATGGCGGATGTTGCTGCATCAAGCTCCAGCAGCATCTTGCTGCACAAACCCAATTGCCTGATTTCAGTTTCTCTATTTATATCAAACTACTAATGCTGTTATGCTACGTCTCAGCTCTCTCGATTTACC

Coding sequence (CDS)

ATGAGAGAGGATCATGGCGATCGCCTTCCTTGCTGTGGTATTGGTTGTGGCTGGTTCTTGTTCATAATCGGGTTCTTCCTTGGTGGTATCCCTTGGTATATCGGGGCATTTTATCTGGTTTGTTGCAGAACTGATGTCGAACAAAGAGAGAAGCCAGGATATATTGCCTGTACAGTTGGTACTGTCGTGGCTATTATAGCCACTGTTTTCGGTGTGGCAAAATTTAATTACTGA

Protein sequence

MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIATVFGVAKFNY
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo18618Spo18618gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo18618.1Spo18618.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18618.1.exon.1Spo18618.1.exon.1exon
Spo18618.1.exon.2Spo18618.1.exon.2exon
Spo18618.1.exon.3Spo18618.1.exon.3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18618.1.utr5p.1Spo18618.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18618.1.CDS.1Spo18618.1.CDS.1CDS
Spo18618.1.CDS.2Spo18618.1.CDS.2CDS
Spo18618.1.CDS.3Spo18618.1.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo18618.1.utr3p.1Spo18618.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo18618.1 vs. NCBI nr
Match: gi|902188845|gb|KNA11242.1| (hypothetical protein SOVF_136910 [Spinacia oleracea])

HSP 1 Score: 172.6 bits (436), Expect = 2.800e-40
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

		  

Query: 1   MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG 60
           MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG
Sbjct: 86  MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG 145

Query: 61  TVVAIIATVFGVAKFNY 78
           TVVAIIATVFGVAKFNY
Sbjct: 146 TVVAIIATVFGVAKFNY 162
[Close]
BLAST of Spo18618.1 vs. NCBI nr
Match: gi|1021036548|gb|KZM94331.1| (hypothetical protein DCAR_017574 [Daucus carota subsp. sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.400e-20
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCGIGC WFLFIIGFFL GIPWYIGAF L+C R D   REKPGY+ACT+  V+A IA
Sbjct: 86  RLPCCGIGCAWFLFIIGFFLAGIPWYIGAFVLLCARYD--HREKPGYVACTIAAVLAAIA 145

Query: 68  TVFGV 73
            VFG+
Sbjct: 146 VVFGL 148
[Close]
BLAST of Spo18618.1 vs. NCBI nr
Match: gi|595875425|ref|XP_007212180.1| (hypothetical protein PRUPE_ppa012647mg [Prunus persica])

HSP 1 Score: 105.1 bits (261), Expect = 5.400e-20
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1 

		  

Query: 2   REDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGT 61
           R  H  RLPCCG+G GW LFIIGFFLGGIPWY+G F L+C R  V+ REKPGY+ACT+ +
Sbjct: 85  RPVHERRLPCCGMGIGWLLFIIGFFLGGIPWYVGTFILLCVR--VDYREKPGYVACTIAS 144

Query: 62  VVAIIATVFGVAK 75
           ++A+IA   G  K
Sbjct: 145 ILAVIAVTLGATK 155
[Close]
BLAST of Spo18618.1 vs. NCBI nr
Match: gi|590611451|ref|XP_007022107.1| (60S ribosomal protein L18a, plant, putative [Theobroma cacao])

HSP 1 Score: 105.1 bits (261), Expect = 5.400e-20
Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCGIG GWFLFIIGFFLG IPWYIG F LVC R  ++ REKPGYIACT+  ++A IA
Sbjct: 94  RLPCCGIGIGWFLFIIGFFLGAIPWYIGLFILVCAR--IDYREKPGYIACTIAAILATIA 153

Query: 68  TVFGVAK 75
            V GV K
Sbjct: 154 IVLGVTK 158
[Close]
BLAST of Spo18618.1 vs. NCBI nr
Match: gi|297853132|ref|XP_002894447.1| (hypothetical protein ARALYDRAFT_474484 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 104.8 bits (260), Expect = 7.100e-20
Identity = 49/66 (74.24%), Postives = 52/66 (78.79%), Query Frame = 1 

		  

Query: 7   DRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAII 66
           +RLPCCG+G GWFLFIIGF LG IPWYIG F LVC R D   REKPGYIACT+  VVA I
Sbjct: 82  NRLPCCGLGLGWFLFIIGFLLGAIPWYIGVFILVCARIDT--REKPGYIACTIAAVVATI 141

Query: 67  ATVFGV 73
           A VFGV
Sbjct: 142 AIVFGV 145
[Close]
BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVD6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136910 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.900e-40
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

		  

Query: 1   MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG 60
           MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG
Sbjct: 86  MREDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVG 145

Query: 61  TVVAIIATVFGVAKFNY 78
           TVVAIIATVFGVAKFNY
Sbjct: 146 TVVAIIATVFGVAKFNY 162
[Close]
BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Match: A0A164YCZ9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017574 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.900e-21
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCGIGC WFLFIIGFFL GIPWYIGAF L+C R D   REKPGY+ACT+  V+A IA
Sbjct: 86  RLPCCGIGCAWFLFIIGFFLAGIPWYIGAFVLLCARYD--HREKPGYVACTIAAVLAAIA 145

Query: 68  TVFGV 73
            VFG+
Sbjct: 146 VVFGL 148
[Close]
BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HD55_SOLCH (Putative 60S ribosomal protein L18a-like protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.200e-20
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCG+G GWFLFIIGFFLG IPWYIGAF L+C R D   REKPG+IACT+   +A++A
Sbjct: 90  RLPCCGMGIGWFLFIIGFFLGAIPWYIGAFLLLCARLD--YREKPGFIACTLAATLALVA 149

Query: 68  TVFGVAKFNY 78
              GV K NY
Sbjct: 150 VTLGVTKVNY 157
[Close]
BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Match: A0A061FAA9_THECC (60S ribosomal protein L18a, plant, putative OS=Theobroma cacao GN=TCM_032256 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.800e-20
Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCGIG GWFLFIIGFFLG IPWYIG F LVC R  ++ REKPGYIACT+  ++A IA
Sbjct: 94  RLPCCGIGIGWFLFIIGFFLGAIPWYIGLFILVCAR--IDYREKPGYIACTIAAILATIA 153

Query: 68  TVFGVAK 75
            V GV K
Sbjct: 154 IVLGVTK 158
[Close]
BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Match: M5WI28_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012647mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.800e-20
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1 

		  

Query: 2   REDHGDRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGT 61
           R  H  RLPCCG+G GW LFIIGFFLGGIPWY+G F L+C R  V+ REKPGY+ACT+ +
Sbjct: 85  RPVHERRLPCCGMGIGWLLFIIGFFLGGIPWYVGTFILLCVR--VDYREKPGYVACTIAS 144

Query: 62  VVAIIATVFGVAK 75
           ++A+IA   G  K
Sbjct: 145 ILAVIAVTLGATK 155
[Close]
BLAST of Spo18618.1 vs. ExPASy Swiss-Prot
Match: R18AL_ARATH (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 9.500e-17
Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = 1 

		  

Query: 9   LPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIAT 68
           LPCCG+G GWFLFI+GF  GGIPWY+GAF ++   T V+ REK GY+AC++ +VV +IA 
Sbjct: 90  LPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLV--TSVDHREKAGYVACSIASVVYLIAV 149

Query: 69  VFGV 73
           + G+
Sbjct: 150 MLGM 151
[Close]
BLAST of Spo18618.1 vs. TAIR (Arabidopsis)
Match: AT1G53560.1 (Ribosomal protein L18ae family)

HSP 1 Score: 102.8 bits (255), Expect = 9.500e-23
Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 1 

		  

Query: 7   DRLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAII 66
           +RLPCCG+G GWFLFIIGF LG IPWY+G F LVC R D   REKPGY+ACT+  VVA I
Sbjct: 82  NRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARID--PREKPGYVACTIAAVVATI 141

Query: 67  ATVFGV 73
             VFGV
Sbjct: 142 TIVFGV 145
[Close]
BLAST of Spo18618.1 vs. TAIR (Arabidopsis)
Match: AT1G17080.1 (Ribosomal protein L18ae family)

HSP 1 Score: 97.4 bits (241), Expect = 4.000e-21
Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1 

		  

Query: 8   RLPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIA 67
           RLPCCGIG GWFLFI+GFFLG IPWY+G F ++  R  ++ REKPGYIACT+  ++A IA
Sbjct: 84  RLPCCGIGLGWFLFIVGFFLGAIPWYVGLFIMMFGRR-IDYREKPGYIACTIAAILATIA 143

Query: 68  TVFGVAK 75
            + GV+K
Sbjct: 144 VILGVSK 149
[Close]
BLAST of Spo18618.1 vs. TAIR (Arabidopsis)
Match: AT1G29970.2 (60S ribosomal protein L18A-1)

HSP 1 Score: 79.0 bits (193), Expect = 1.500e-15
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 1 

		  

Query: 9   LPCCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTV 60
           LPCCG+G GWFLFI+GF  GGIPWY+GAF ++   T V+ REK GY+AC++
Sbjct: 90  LPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLV--TSVDHREKAGYVACSI 138
[Close]
BLAST of Spo18618.1 vs. TAIR (Arabidopsis)
Match: AT3G14595.1 (Ribosomal protein L18ae family)

HSP 1 Score: 73.6 bits (179), Expect = 6.100e-14
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 1 

		  

Query: 11  CCGIGCGWFLFIIGFFLGGIPWYIGAFYLVCCRTDVEQREKPGYIACTVGTVVAIIATVF 70
           CCGIG GW LFI+GFF   +PWYIG F L+  R     RE+PGYIAC VG V A I  +F
Sbjct: 67  CCGIGIGWVLFILGFFFA-LPWYIGFFLLLFSRNP---RERPGYIACAVGAVFATIIVIF 126

Query: 71  GVAK 75
           G  +
Sbjct: 127 GTVR 126
The following BLAST results are available for this feature:
BLAST of Spo18618.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902188845|gb|KNA11242.1|2.8e-40100.hypothetical protein SOVF_1369... [more]
gi|1021036548|gb|KZM94331.1|1.4e-2073.8hypothetical protein DCAR_0175... [more]
gi|595875425|ref|XP_007212180.1|5.4e-2061.6hypothetical protein PRUPE_ppa... [more]
gi|590611451|ref|XP_007022107.1|5.4e-2071.660S ribosomal protein L18a, pl... [more]
gi|297853132|ref|XP_002894447.1|7.1e-2074.2hypothetical protein ARALYDRAF... [more]
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BLAST of Spo18618.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QVD6_SPIOL1.9e-40100.Uncharacterized protein OS=Spi... [more]
A0A164YCZ9_DAUCA9.9e-2173.8Uncharacterized protein OS=Dau... [more]
A0A0V0HD55_SOLCH2.2e-2067.1Putative 60S ribosomal protein... [more]
A0A061FAA9_THECC3.8e-2071.660S ribosomal protein L18a, pl... [more]
M5WI28_PRUPE3.8e-2061.6Uncharacterized protein OS=Pru... [more]
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BLAST of Spo18618.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
R18AL_ARATH9.5e-1757.860S ribosomal protein L18a-lik... [more]
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BLAST of Spo18618.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G53560.19.5e-2369.7Ribosomal protein L18ae family[more]
AT1G17080.14.0e-2162.6Ribosomal protein L18ae family[more]
AT1G29970.21.5e-1562.760S ribosomal protein L18A-1[more]
AT3G14595.16.1e-1456.2Ribosomal protein L18ae family[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 7..74
score: 2.2
NoneNo IPR availablePANTHERPTHR10052:SF9SUBFAMILY NOT NAMEDcoord: 7..74
score: 2.2