Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGTAATTTGAAGAAATCTGGTTCTAATGCCCATGAACTATCTCTGCCACATGAAGAACAGCTAAAGAAGGTACTTACTTCCCAACATCATTAGCTAATAGCTTGTAGTCTCGTGTTTTTTCGTTTATTGAAATGGAGATTTAATCGCGTTGAGTATTTGCAGATTGGTGAGGTAAGGACCGCAGTAAGTCCTATCCCGGAAAAGTTGTCTAAATTTTGTTCTGATGCACAAATTGCAAGATACTTGCGAGCACGAAACTGGAATGTTAAAAAGGCCACAAAGATGTTGAAAGATTCTTTGAAATGGAGATTAGAATTCAAGCCCGAACAGATTCGTTGGGTAAGTATGGTGTTCTTCTGTTATGTAGTTAGGCTCTGTTGTGTTCTGTTCGACTTATTTTGACTTATTTCACATAAAATAAATTCCGATTAATTGAGTTAAGTTCAGATAAGTTCAGTTAAGTTCAGATAATATAAGTTTAGATAAAATAAGTTTTTTTCGATGTTTTCACATACAAATAAGTTTATTTCAGACAAAATAAGTTTATAAGTTCAGATAAGTTTAGACAGAATAAGTTGAATAGCACGAAGTCTTATTATGTCTAAAGATGTTAAAAACTGATTGTAACCGGGGTTGTATGTTGTTTCCATTAATTCAGGAAGATGTTGCTAGTGAAGCTGAATCGGGAAAAGTATACAGATCAACTTCTGTTGATAAGGAAGGGAGACCTGTCCTGGTCATGCGGCCTAGTCTTGAGGTACTATTTTTAGTTTTATGTTTTCTCACAGTTAATGAGAAAGAGGTTATGATATTATTCATGTTAATGTGGGATCCTGTAGGATATGTTGGAGTTGTGCAATATGTGGTAGGTACCGTAGGTTACTTGGTGCCTTTTGTGGTCCATTTAAGGTCATAATTAAATGAGGCTTGGTTTCATGTTGGGACAGTATTTTGTTCTGCTTTTTTGTTCTGTTTTCTTTCTCTAAAGGCTTGTTTGGTGTAAAACTGTAAAATCATGACTGAAATGAACCATATTGAGCTTGTACATGGAATATCCCATGTGGATATGCAACTCCGCTTCAAGTACTTCATATGTTTAGCTTTCACTTATTTTCATGCCCGACTTATCTAGGCGGTAATAACTAATACTTCCCCTGTTCTGTTTTAGTTGCAACCTTTACTGTTCAGTGTTCACCACATAGGTAGTAAATTACATAAATTTCCCCATTTTTAGATGTAATTAGGGGGAAAGGGTGTGTTGTTGAATATGGATGGGGTAGACTGGTAGTTTTGGTAAGTCAAGTAGGTAAATATGCCAAAAATAGAATGGTTGCAACTAAAAGGAACGATCCAAAATAGAAACATTGCAACTAAAAGAGAACAGAATAAGTAAGTGGTAATGAAAATAAACGGAAAAAAGTGGAGATGTATTACTATGGCCTATGGGCATTCACAGAGAATGACCAACAAACTCGTTATATCATTGATGTCGATAATGAAGAAGAATAAGGGTTACCAATGTCCAATAATACCTTTTTTAATTACCAATTCAAATGTGCACATCTTGAATTATTGATCTTTTATCACACGAGCCTTGTTAATGATTGATTGAGTTCTTTATGCATTTCCATTTCAGAGGTTGATTTTGTTAATGACTTTGCCGGTTTTGTTGTTACAGAACTCCAAGTCCGTAGCAGGACAAATTAAATACTTGGTGTATTGCATGGAAAATGCGATCCTTCACTTACCATCTAATCAAGAGCAGATGGTCTGGCTGGTCGACTATTGGAATTTCAGTTTATCAAATATTTCACTCAAATCAGCCAAGGAAGCTGCCCATGTATTACAAAACCATTATCCAGAAAGATTGGGTGTTGCTATTTTGTATAACCCTCCTAGGTTATTCGAACAATTTTACAAGGTATTCCTTTTCTTTCTTATCTGATAGCACTATCTTCTACACCCGATCAACTTGATCCCGGCCCGTTGGCGTGGCCCGGAAATTAGCGGGGTTTGGACATAATTTTAGGCCCCTTTTCCGGGCCCAGCACTGCCCGATTTTTAAGTTTTTGCCGGCTTTTGGGCAACGTAAAACTACACTTATAGAGTTATAGTTATAAGTTTGGCCCGGCACAAAAAGCTCGCTACTCTTGGGCACACAAAATTGGCCCGAAGCTTGGCCCGGCCCGATAATGGGCTGACTTTTAAGCCCCTTTTCCAGGCCCGGCACTGCCTGATTTTAAATTTTTTGCCGGGTTTTTGGGCATCGTAAAACTACACTTATAGTTATAAGTTTGACCTGGACAGAAAATCCCGCTACTTTTGGCCCAAAACAGCGGGTTTTGGACACACAAAATTGGCCCGGCCTGACATAATGGGCTGTTAGTAGGCCCTACCCGGCCCGGCCTGACATAATATGCTGTTTATAGACCCTGTCCGACCCGGCCTGTCTTTTGATCAGGTTTACTCTCTTCCTTCCTGGATGCCAGACAACTTGTTGCTTAAGTTTCTGCATGTCTAGATTTCTGGAATGACATAAACAAACATAAATGAAGCTGACAATTTGTGTAAATTGTGCAAGAATATGCCAAAAAGTACTCGTTACAAAACTTCAAGACGAGTGTAAAATGTGTTTATGATCTCGTTTCAGGTGGTTAAACCTTTTCTGGAGGCAAAGACTCGGAAGAAAGTGAAGTTTGTTTACACTGATGACGAAAGCACGAAGAAGATCATGGAAGAAGTTTTCGAAATGGACCAGCTCGAATCTGCATTTGGTGGGGAAAATCCGGAAACTTTTGATATTCAAAAGTATGCGCAAAGAATGAAAGAAGATGATGAAAAAATGCGGTCTTTCTGGGAAGAAGCATCTGTAGTTGACTCGAGTTGCAACAATGGTCTTATTATGCATGAGAGGTCACTGTCTGATCCATCCGAGGGTGAGGCAGAGAGTGACGGTACGCCATCTTCTTCAACCGCTGAGGATTCCCGAGCCTCTACGCCAGATGTCGGGTTGTCAGTGGCTACCGTGAGCCTTGAGGAACCTGGACATGTTAAAGTTTGATATAACAGCTAACCCGAATCTGACGAAATCTCTTGGTTATGAATTATGATGTACAAACAATGTAGACCAAATTCTTGCAAATAATCCTTTCTTCTGAATTATATGTGTAGTAGTATATAGTTCTGTTTTTGCTGGCTTATCAGTTTATAGAGAAGTGGCATAATGGAAGTTGTATTGATCCCTGACATTTATCTTGTTTACAAAGCTATGGAATGTGCACCTAGGAAGAAGGCTCTCTTTTCGAGACCGGGAGAAAATACGACTGGGGGAGGGAGCGGATGATCATGGAATCCGGCAACCGGGTGTGGCACTAACCAGTGGTGGGGCCAAGATTTTTGAATCAGGGTGTCTGGGGGGTTGACATTTGAATTGGGGTGTCGACATATTAGTAAAACAGCCGTATTAATTTATTGTTTCTTAT ATGAGTAGTAATTTGAAGAAATCTGGTTCTAATGCCCATGAACTATCTCTGCCACATGAAGAACAGCTAAAGAAGATTGGTGAGGTAAGGACCGCAGTAAGTCCTATCCCGGAAAAGTTGTCTAAATTTTGTTCTGATGCACAAATTGCAAGATACTTGCGAGCACGAAACTGGAATGTTAAAAAGGCCACAAAGATGTTGAAAGATTCTTTGAAATGGAGATTAGAATTCAAGCCCGAACAGATTCGTTGGGAAGATGTTGCTAGTGAAGCTGAATCGGGAAAAGTATACAGATCAACTTCTGTTGATAAGGAAGGGAGACCTGTCCTGGTCATGCGGCCTAGTCTTGAGAACTCCAAGTCCGTAGCAGGACAAATTAAATACTTGGTGTATTGCATGGAAAATGCGATCCTTCACTTACCATCTAATCAAGAGCAGATGGTCTGGCTGGTCGACTATTGGAATTTCAGTTTATCAAATATTTCACTCAAATCAGCCAAGGAAGCTGCCCATGTATTACAAAACCATTATCCAGAAAGATTGGGTGTTGCTATTTTGTATAACCCTCCTAGGTTATTCGAACAATTTTACAAGGTGGTTAAACCTTTTCTGGAGGCAAAGACTCGGAAGAAAGTGAAGTTTGTTTACACTGATGACGAAAGCACGAAGAAGATCATGGAAGAAGTTTTCGAAATGGACCAGCTCGAATCTGCATTTGGTGGGGAAAATCCGGAAACTTTTGATATTCAAAAGTATGCGCAAAGAATGAAAGAAGATGATGAAAAAATGCGGTCTTTCTGGGAAGAAGCATCTGTAGTTGACTCGAGTTGCAACAATGGTCTTATTATGCATGAGAGGTCACTGTCTGATCCATCCGAGGGTGAGGCAGAGAGTGACGGTACGCCATCTTCTTCAACCGCTGAGGATTCCCGAGCCTCTACGCCAGATGTCGGGTTGTCAGTGGCTACCGTGAGCCTTGAGGAACCTGGACATGTTAAAGTTTGATATAACAGCTAACCCGAATCTGACGAAATCTCTTGGTTATGAATTATGATGTACAAACAATGTAGACCAAATTCTTGCAAATAATCCTTTCTTCTGAATTATATGTGTAGTAGTATATAGTTCTGTTTTTGCTGGCTTATCAGTTTATAGAGAAGTGGCATAATGGAAGTTGTATTGATCCCTGACATTTATCTTGTTTACAAAGCTATGGAATGTGCACCTAGGAAGAAGGCTCTCTTTTCGAGACCGGGAGAAAATACGACTGGGGGAGGGAGCGGATGATCATGGAATCCGGCAACCGGGTGTGGCACTAACCAGTGGTGGGGCCAAGATTTTTGAATCAGGGTGTCTGGGGGGTTGACATTTGAATTGGGGTGTCGACATATTAGTAAAACAGCCGTATTAATTTATTGTTTCTTAT ATGAGTAGTAATTTGAAGAAATCTGGTTCTAATGCCCATGAACTATCTCTGCCACATGAAGAACAGCTAAAGAAGATTGGTGAGGTAAGGACCGCAGTAAGTCCTATCCCGGAAAAGTTGTCTAAATTTTGTTCTGATGCACAAATTGCAAGATACTTGCGAGCACGAAACTGGAATGTTAAAAAGGCCACAAAGATGTTGAAAGATTCTTTGAAATGGAGATTAGAATTCAAGCCCGAACAGATTCGTTGGGAAGATGTTGCTAGTGAAGCTGAATCGGGAAAAGTATACAGATCAACTTCTGTTGATAAGGAAGGGAGACCTGTCCTGGTCATGCGGCCTAGTCTTGAGAACTCCAAGTCCGTAGCAGGACAAATTAAATACTTGGTGTATTGCATGGAAAATGCGATCCTTCACTTACCATCTAATCAAGAGCAGATGGTCTGGCTGGTCGACTATTGGAATTTCAGTTTATCAAATATTTCACTCAAATCAGCCAAGGAAGCTGCCCATGTATTACAAAACCATTATCCAGAAAGATTGGGTGTTGCTATTTTGTATAACCCTCCTAGGTTATTCGAACAATTTTACAAGGTGGTTAAACCTTTTCTGGAGGCAAAGACTCGGAAGAAAGTGAAGTTTGTTTACACTGATGACGAAAGCACGAAGAAGATCATGGAAGAAGTTTTCGAAATGGACCAGCTCGAATCTGCATTTGGTGGGGAAAATCCGGAAACTTTTGATATTCAAAAGTATGCGCAAAGAATGAAAGAAGATGATGAAAAAATGCGGTCTTTCTGGGAAGAAGCATCTGTAGTTGACTCGAGTTGCAACAATGGTCTTATTATGCATGAGAGGTCACTGTCTGATCCATCCGAGGGTGAGGCAGAGAGTGACGGTACGCCATCTTCTTCAACCGCTGAGGATTCCCGAGCCTCTACGCCAGATGTCGGGTTGTCAGTGGCTACCGTGAGCCTTGAGGAACCTGGACATGTTAAAGTTTGA MSSNLKKSGSNAHELSLPHEEQLKKIGEVRTAVSPIPEKLSKFCSDAQIARYLRARNWNVKKATKMLKDSLKWRLEFKPEQIRWEDVASEAESGKVYRSTSVDKEGRPVLVMRPSLENSKSVAGQIKYLVYCMENAILHLPSNQEQMVWLVDYWNFSLSNISLKSAKEAAHVLQNHYPERLGVAILYNPPRLFEQFYKVVKPFLEAKTRKKVKFVYTDDESTKKIMEEVFEMDQLESAFGGENPETFDIQKYAQRMKEDDEKMRSFWEEASVVDSSCNNGLIMHERSLSDPSEGEAESDGTPSSSTAEDSRASTPDVGLSVATVSLEEPGHVKV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo17893.1 vs. NCBI nr
Match: gi|902197101|gb|KNA13312.1| (hypothetical protein SOVF_115890 [Spinacia oleracea]) HSP 1 Score: 652.5 bits (1682), Expect = 3.900e-184 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1
BLAST of Spo17893.1 vs. NCBI nr
Match: gi|731312897|ref|XP_010676968.1| (PREDICTED: random slug protein 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 487.3 bits (1253), Expect = 2.200e-134 Identity = 265/350 (75.71%), Postives = 294/350 (84.00%), Query Frame = 1
BLAST of Spo17893.1 vs. NCBI nr
Match: gi|823237020|ref|XP_012451169.1| (PREDICTED: random slug protein 5-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 377.9 bits (969), Expect = 1.900e-101 Identity = 193/317 (60.88%), Postives = 243/317 (76.66%), Query Frame = 1
BLAST of Spo17893.1 vs. NCBI nr
Match: gi|590598238|ref|XP_007018837.1| (Sec14p-like phosphatidylinositol transfer family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 377.5 bits (968), Expect = 2.400e-101 Identity = 181/267 (67.79%), Postives = 225/267 (84.27%), Query Frame = 1
BLAST of Spo17893.1 vs. NCBI nr
Match: gi|728831392|gb|KHG10835.1| (Random slug 5 [Gossypium arboreum]) HSP 1 Score: 376.7 bits (966), Expect = 4.200e-101 Identity = 194/321 (60.44%), Postives = 243/321 (75.70%), Query Frame = 1
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3D4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115890 PE=4 SV=1) HSP 1 Score: 652.5 bits (1682), Expect = 2.700e-184 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6Q7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009550 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 1.500e-134 Identity = 265/350 (75.71%), Postives = 294/350 (84.00%), Query Frame = 1
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Match: A0A0D2U625_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G043500 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 1.300e-101 Identity = 193/317 (60.88%), Postives = 243/317 (76.66%), Query Frame = 1
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Match: A0A061FH69_THECC (Sec14p-like phosphatidylinositol transfer family protein isoform 1 OS=Theobroma cacao GN=TCM_034950 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.700e-101 Identity = 181/267 (67.79%), Postives = 225/267 (84.27%), Query Frame = 1
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NDE2_GOSAR (Random slug 5 OS=Gossypium arboreum GN=F383_15884 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.900e-101 Identity = 194/321 (60.44%), Postives = 243/321 (75.70%), Query Frame = 1
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.000e-32 Identity = 86/255 (33.73%), Postives = 141/255 (55.29%), Query Frame = 1
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.400e-25 Identity = 73/211 (34.60%), Postives = 117/211 (55.45%), Query Frame = 1
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.600e-21 Identity = 73/251 (29.08%), Postives = 127/251 (50.60%), Query Frame = 1
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.100e-16 Identity = 72/231 (31.17%), Postives = 107/231 (46.32%), Query Frame = 1
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 2.700e-15 Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = 1
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Match: AT4G08690.2 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 344.7 bits (883), Expect = 6.200e-95 Identity = 171/295 (57.97%), Postives = 226/295 (76.61%), Query Frame = 1
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Match: AT1G22180.2 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 340.9 bits (873), Expect = 9.000e-94 Identity = 179/315 (56.83%), Postives = 234/315 (74.29%), Query Frame = 1
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 260.0 bits (663), Expect = 2.000e-69 Identity = 122/244 (50.00%), Postives = 182/244 (74.59%), Query Frame = 1
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 254.2 bits (648), Expect = 1.100e-67 Identity = 118/258 (45.74%), Postives = 183/258 (70.93%), Query Frame = 1
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Match: AT1G01630.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 98.6 bits (244), Expect = 7.700e-21 Identity = 71/228 (31.14%), Postives = 121/228 (53.07%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17893.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17893.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17893.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17893.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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