Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTCGAGAAGGAGAGTTTTTGGTTGATCTTGAATGTGGTGGTACTACCTCTGAGGAGGAGTTGAGTGGGGATGCTGTTTCCGATAATGGAAGAGGGAGAGTGGCGGTAAGTCGGGGCCGTAATGGGGTTTTATGTTATAGTGGGTTGACAAATGGTGGTGCCGTGGTTGTTGACTCCAACATTGGTGGTCAAGGAGTTGATTTACTTATTGACAAAAGTTCAGAAGGTGAAGATTGTAGAGATTTCGTTGCTGTTTTAGAGAAGAGGAATCCAAAGGAACAACGAAAGAAGGTGGGGTCGAAGAAGGCATCGAAACCACCCCGACCTCCAAATGGTCCATTGTTGACTGCATCGGACCTGAAATTGGTGAAGGAACTGTCTGAATTAGCTGCTAGAAAGCGGGCAAGAGTTGAACGGATTAAAGCATTTAGGAAGATGAAAGATGCTAAGCGGTCTTCTTCAGGCAGCAGCGTAACTGCAATGGTGATAACGGTTGTGTTCTTCCTTATTATAGTGTTTCAAGGTATGGTGATTGGAACTTTCAGAGTTTGCACTTCTATATTGCCTCATTTTTGCAGCATGTTCTCTTAAAGGCATTAGTTTTGTTGGCTTAATCATACATAAACTTTTGCTTTCAGAAGATGAAACTTGCTCCTGATAACTTGTTTTTAAAATACTTTCTTGTTTGTGATCAGTAAATAATTACAATTTACTGTCTGTATATATCTTATGAGAGATTGGGCCAAAGATAGATGATCTCATATTGATATGCCAGGAAATCCTAGGGAGTAAGCAGAGGTTTTCCCTAAGATCCACGGAAGCCTTGTCTCCCAAAATTTTCCTGCATTTGTGGGTTGATTGTGAAGAACTTTAAAGTAAAGAGAGATATTGGATGGATGAACATTCATGCCTGTTTTCTGTGTGTTGCATCAGAAACCCAATATGGAAAAACCAAATGCCACTCTTTCTTTCGTGAACCAAGTCACCAACACCCATAGTCTTCGGACCTTATGTAGAGACGCATATATCTGTTGTTGTATGTTTAGCTGAGCAACTTTCTGACATGTATTCTCGGCCCCAAGTTTCTCTGTCTTAGTTGTGTATATGTTGAAGCTTCAATGATATACCAGTATGTATAGGAAATGTAAACTTTGTCATTCGTCTGAGTAGTGATAACATTATTTGTGCATATTGGTAATTGTTTAGAGGATGTATCATGGTGCATCCTTTTAATTGCAGTTGAAAAACTTGGATTTAAGAAACTTTTATTAGGACAAAGAAAGGATGTAGTGTTGTTGTCAAAACACTCAATATTCCTTGCATGTCACGCTGTAATCGTTCAAAAAAAGTGTTTCTCTTATGCCTTTATGCTTTTCAGTCCTTTGCATGTTAGTTAGTTTAAATGTGTTGCAACAAAACGCACGTTTTAGGTTTAAAACAGGTGTAATTTCTTTCTAATTTTCAGGTTATATGACTTCTCATATATGATGCCACAGGCACGTCTATGTGACAGATGATCCTGTGTATCCTCACCAACTCTAATTTCCAGATTCTTCTACTTCTATGTCCATAAGTCCATCCTTATTCCTGTATTTGAGAGTTTCCATAATTCCATTCATTATATGGCTGATGTATCATGTATTGGTTCTGCCACTAACCTCCCAATTATGAACAATTAAGCTGTATATTAGCTATTGAAATTATAAAAATTATTTTATTCCATTTGTTATCTGTTAATTAAGGTCTTGTTTATCCCCAACCTGGGCACTTTTGGCCCCTGTTACTTTTTACCCTAACTTACTAAACATTGTTGTCATCAGAAGAATTCTTCAAAGAATAAAGTTATTGCTAAGTTAACAGTTGTTAAACATTGTTAGGATTTGATCTTGCAGGAATTTACTCTGGAAGTAGCTTTACTAAGAAATTTCAGGGATCACCTGCACCAGCAACAGCGAAGGAAGGTTTGATTTCGATCCAATTATTCAACAATGCTCCTACGTATGAAATGAATCAACCCATTTCTCTTTCTCCAAAGTGAGTAGTTAATTCTGTTATTTTGAGCAGTTAATTCCGTTATTTTCACGATATACTCCACAGTCCATACATTAGATAAATGCTGATATAAGGGTTTTCAACTCTGTTCTTTTGTGTAGTTCTTTGGAGGTGGCTTCGAGTTCAAGTCCTCGGGAGCAAGAAGGCAGGGATGCTCGGTAAAAAAATTCTTTGTTAGAATCATCAGGATAACTTACTGAAATGGAATGTTCAACTTCTAAATCATTTTTTTCAAAAAAAGAAATCCGATTTCCAAAAAAGGCTGCTCGTTTGTAAATAGGTATAGAGCTTCATCTACGGGAGATTGTATAGATGTTTTCATCTTTCAAACCGGGATCTTGTCCAGACTTTGATATCCAGATCGAGGAAGCGAAATTTTGGTTCTTTGATTCATTGATTCATATTTTTCTAGTTGTGTTTTCCATCTAGTTTAGATCTGAATTTGATTAGTTTAAGACTCTACTAGCTAATTGACATCCTAGGATTGTCATTGTTTTCAATTTGTACTTGTCACCTACTGTGGCTATGCTCTTGTTGGCCCGGGGGTGACCTTATTTTTTATGCTAATGTGACACAATGCATTGTTTGCAAGTCAAGTTGGTACACAATTGTTTTGTTGACCCAAAAAAATTCACGCGT ATGGCTTCTCGAGAAGGAGAGTTTTTGGTTGATCTTGAATGTGGTGGTACTACCTCTGAGGAGGAGTTGAGTGGGGATGCTGTTTCCGATAATGGAAGAGGGAGAGTGGCGGTAAGTCGGGGCCGTAATGGGGTTTTATGTTATAGTGGGTTGACAAATGGTGGTGCCGTGGTTGTTGACTCCAACATTGGTGGTCAAGGAGTTGATTTACTTATTGACAAAAGTTCAGAAGGTGAAGATTGTAGAGATTTCGTTGCTGTTTTAGAGAAGAGGAATCCAAAGGAACAACGAAAGAAGGTGGGGTCGAAGAAGGCATCGAAACCACCCCGACCTCCAAATGGTCCATTGTTGACTGCATCGGACCTGAAATTGGTGAAGGAACTGTCTGAATTAGCTGCTAGAAAGCGGGCAAGAGTTGAACGGATTAAAGCATTTAGGAAGATGAAAGATGCTAAGCGGTCTTCTTCAGGCAGCAGCGTAACTGCAATGGTGATAACGGTTGTGTTCTTCCTTATTATAGTGTTTCAAGGAATTTACTCTGGAAGTAGCTTTACTAAGAAATTTCAGGGATCACCTGCACCAGCAACAGCGAAGGAAGGTTTGATTTCGATCCAATTATTCAACAATGCTCCTACGTATGAAATGAATCAACCCATTTCTCTTTCTCCAAATTCTTTGGAGGTGGCTTCGAGTTCAAGTCCTCGGGAGCAAGAAGGCAGGGATGCTCGGTAAAAAAATTCTTTGTTAGAATCATCAGGATAACTTACTGAAATGGAATGTTCAACTTCTAAATCATTTTTTTCAAAAAAAGAAATCCGATTTCCAAAAAAGGCTGCTCGTTTGTAAATAGGTATAGAGCTTCATCTACGGGAGATTGTATAGATGTTTTCATCTTTCAAACCGGGATCTTGTCCAGACTTTGATATCCAGATCGAGGAAGCGAAATTTTGGTTCTTTGATTCATTGATTCATATTTTTCTAGTTGTGTTTTCCATCTAGTTTAGATCTGAATTTGATTAGTTTAAGACTCTACTAGCTAATTGACATCCTAGGATTGTCATTGTTTTCAATTTGTACTTGTCACCTACTGTGGCTATGCTCTTGTTGGCCCGGGGGTGACCTTATTTTTTATGCTAATGTGACACAATGCATTGTTTGCAAGTCAAGTTGGTACACAATTGTTTTGTTGACCCAAAAAAATTCACGCGT ATGGCTTCTCGAGAAGGAGAGTTTTTGGTTGATCTTGAATGTGGTGGTACTACCTCTGAGGAGGAGTTGAGTGGGGATGCTGTTTCCGATAATGGAAGAGGGAGAGTGGCGGTAAGTCGGGGCCGTAATGGGGTTTTATGTTATAGTGGGTTGACAAATGGTGGTGCCGTGGTTGTTGACTCCAACATTGGTGGTCAAGGAGTTGATTTACTTATTGACAAAAGTTCAGAAGGTGAAGATTGTAGAGATTTCGTTGCTGTTTTAGAGAAGAGGAATCCAAAGGAACAACGAAAGAAGGTGGGGTCGAAGAAGGCATCGAAACCACCCCGACCTCCAAATGGTCCATTGTTGACTGCATCGGACCTGAAATTGGTGAAGGAACTGTCTGAATTAGCTGCTAGAAAGCGGGCAAGAGTTGAACGGATTAAAGCATTTAGGAAGATGAAAGATGCTAAGCGGTCTTCTTCAGGCAGCAGCGTAACTGCAATGGTGATAACGGTTGTGTTCTTCCTTATTATAGTGTTTCAAGGAATTTACTCTGGAAGTAGCTTTACTAAGAAATTTCAGGGATCACCTGCACCAGCAACAGCGAAGGAAGGTTTGATTTCGATCCAATTATTCAACAATGCTCCTACGTATGAAATGAATCAACCCATTTCTCTTTCTCCAAATTCTTTGGAGGTGGCTTCGAGTTCAAGTCCTCGGGAGCAAGAAGGCAGGGATGCTCGGTAA MASREGEFLVDLECGGTTSEEELSGDAVSDNGRGRVAVSRGRNGVLCYSGLTNGGAVVVDSNIGGQGVDLLIDKSSEGEDCRDFVAVLEKRNPKEQRKKVGSKKASKPPRPPNGPLLTASDLKLVKELSELAARKRARVERIKAFRKMKDAKRSSSGSSVTAMVITVVFFLIIVFQGIYSGSSFTKKFQGSPAPATAKEGLISIQLFNNAPTYEMNQPISLSPNSLEVASSSSPREQEGRDAR Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo17674.1 vs. NCBI nr
Match: gi|902226382|gb|KNA20343.1| (hypothetical protein SOVF_052730 [Spinacia oleracea]) HSP 1 Score: 451.8 bits (1161), Expect = 7.400e-124 Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 1
BLAST of Spo17674.1 vs. NCBI nr
Match: gi|731336745|ref|XP_010679423.1| (PREDICTED: uncharacterized protein LOC104894796 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 325.5 bits (833), Expect = 8.000e-86 Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 1
BLAST of Spo17674.1 vs. NCBI nr
Match: gi|590719851|ref|XP_007051170.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 176.0 bits (445), Expect = 7.900e-41 Identity = 107/220 (48.64%), Postives = 146/220 (66.36%), Query Frame = 1
BLAST of Spo17674.1 vs. NCBI nr
Match: gi|720010325|ref|XP_010259215.1| (PREDICTED: uncharacterized protein LOC104598732 [Nelumbo nucifera]) HSP 1 Score: 167.5 bits (423), Expect = 2.800e-38 Identity = 116/248 (46.77%), Postives = 150/248 (60.48%), Query Frame = 1
BLAST of Spo17674.1 vs. NCBI nr
Match: gi|743791291|ref|XP_011040927.1| (PREDICTED: uncharacterized protein LOC105137049 [Populus euphratica]) HSP 1 Score: 161.8 bits (408), Expect = 1.500e-36 Identity = 104/237 (43.88%), Postives = 149/237 (62.87%), Query Frame = 1
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLF6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052730 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 5.200e-124 Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 1
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDJ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g122180 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.600e-86 Identity = 185/251 (73.71%), Postives = 208/251 (82.87%), Query Frame = 1
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Match: A0A061DSE1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_004851 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 5.500e-41 Identity = 107/220 (48.64%), Postives = 146/220 (66.36%), Query Frame = 1
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Match: B9RNA8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1346300 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.000e-34 Identity = 106/235 (45.11%), Postives = 147/235 (62.55%), Query Frame = 1
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Match: D7U2K8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01750 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.700e-34 Identity = 107/237 (45.15%), Postives = 146/237 (61.60%), Query Frame = 1
BLAST of Spo17674.1 vs. TAIR (Arabidopsis)
Match: AT4G01960.1 (unknown protein) HSP 1 Score: 108.6 bits (270), Expect = 5.400e-24 Identity = 78/219 (35.62%), Postives = 127/219 (57.99%), Query Frame = 1
BLAST of Spo17674.1 vs. TAIR (Arabidopsis)
Match: AT1G02380.1 (unknown protein) HSP 1 Score: 98.2 bits (243), Expect = 7.400e-21 Identity = 84/249 (33.73%), Postives = 121/249 (48.59%), Query Frame = 1
BLAST of Spo17674.1 vs. TAIR (Arabidopsis)
Match: AT3G17120.1 (unknown protein) HSP 1 Score: 84.3 bits (207), Expect = 1.100e-16 Identity = 50/124 (40.32%), Postives = 74/124 (59.68%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17674.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17674.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17674.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo17674.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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