Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACAAAAGCAAACTTGATTGTCGCTGCTGCTGCAGGGGCTTTGACCGTCATCATCACTCAGGTTGTTACATCATATTTCACTGCTTAACCCTAAATGTGAATACTTCATGAATATAGGTTACATGTCGTATTTTGCCTACTTCTTGAGTTTCGCACTTGACAATCCTGACTCACGTTCTTCATCTTTGTTTATGTGAAAAGTACTTTCGGGACATGCTTTTCTGGAAGTTGGTGTGTTTGTGGGGAGGGGGAGTCCATATACTTGGCTGGTGTTGATGCTGCAAATATAATTTTATTTTAGAATCTTCTGGATTGAATTATTTCCTTGACCTAAAAATGAATTTCATACTTGAAAGATAGGAAGGGATAAAAATAATATTTCGATTTTTTTACTTAGACTTAAAATGAAAGGTGAAGTTCTTACTGGAATATGAAAAATTGGCAAGTGTGAAGTTCTTGGGACAGAAGAAGAATCAATTATACTTTGGCAAACCAATATGTCTGAGATTTTCTGAAGTAATTGAACCTCTTTTTATTTGTCATAAAAGAAACTTGCTTGGAATCTGGTCTGATGCCCATGGTTGTTCTTGGAGTTGACAGCCTTTGGATACAGCATCATCCAAGATGCAAACTAGCGACTTTGGAAAGGCAAAAGGGCTCTGGAAAACCCTTACTGAAGGCAAGTGGAGTGGTGCTTTTGATGGCCTTGGCATCTCCCTCCTCTTGACTGCGAATCCATCTATTCAGGTATTTAGTCTAAAGTCTAACTCCTTGTCCTGTAGCAGATGTTTAGTTTTGCAGACATTTTTCCAATGGACTGTTAATAAAGCGTTAAAGCTGACTTGTTCTGTATTCCCAGTATACAGTTTTTGATCAGCTCAAAAACAGACTCCTAAAAACCAATAACACAAACTCGGATTTGTCCCCACAAGCCCTTTCTGCCTCCACTGCCTTTTTGTTGGGGGCTCTCTCCAAGACTATTGCTACCTGCTTGACTTATCCAGCTATTAGGTTGGTAATTCCTTCACTTCCTACATTATTAATACATGCAAGCATAAGTCCATTTTATGGAAATTTGAAATAGTAATCAATAAACTTTGCAGGTGTAAGGTTGTGATTCAGGCAGCAGAGAGAGAGGAAGAAAAGCTTCCAAAATCAGAAAAAGCTCGTAAAACTATCTCAAGAGTATTCTACAGCATCTGGAAAAATGAAGGAATTCTTGGATTTTTTAAGGGTTTACACGCCCAAATTTTGAAGACTGTTTTAAGCTCTGCCTTGCTTCTGATGATAAAGGAGAAGATTACAAAGTCTACTTGGGTCATGATGCTTGCTCTTAGAAAATACCTATTGACAACTAGTACAAGATTGAAAAGTGCATGA ATGGGCACAAAAGCAAACTTGATTGTCGCTGCTGCTGCAGGGGCTTTGACCGTCATCATCACTCAGCCTTTGGATACAGCATCATCCAAGATGCAAACTAGCGACTTTGGAAAGGCAAAAGGGCTCTGGAAAACCCTTACTGAAGGCAAGTGGAGTGGTGCTTTTGATGGCCTTGGCATCTCCCTCCTCTTGACTGCGAATCCATCTATTCAGTATACAGTTTTTGATCAGCTCAAAAACAGACTCCTAAAAACCAATAACACAAACTCGGATTTGTCCCCACAAGCCCTTTCTGCCTCCACTGCCTTTTTGTTGGGGGCTCTCTCCAAGACTATTGCTACCTGCTTGACTTATCCAGCTATTAGGTGTAAGGTTGTGATTCAGGCAGCAGAGAGAGAGGAAGAAAAGCTTCCAAAATCAGAAAAAGCTCGTAAAACTATCTCAAGAGTATTCTACAGCATCTGGAAAAATGAAGGAATTCTTGGATTTTTTAAGGGTTTACACGCCCAAATTTTGAAGACTGTTTTAAGCTCTGCCTTGCTTCTGATGATAAAGGAGAAGATTACAAAGTCTACTTGGGTCATGATGCTTGCTCTTAGAAAATACCTATTGACAACTAGTACAAGATTGAAAAGTGCATGA ATGGGCACAAAAGCAAACTTGATTGTCGCTGCTGCTGCAGGGGCTTTGACCGTCATCATCACTCAGCCTTTGGATACAGCATCATCCAAGATGCAAACTAGCGACTTTGGAAAGGCAAAAGGGCTCTGGAAAACCCTTACTGAAGGCAAGTGGAGTGGTGCTTTTGATGGCCTTGGCATCTCCCTCCTCTTGACTGCGAATCCATCTATTCAGTATACAGTTTTTGATCAGCTCAAAAACAGACTCCTAAAAACCAATAACACAAACTCGGATTTGTCCCCACAAGCCCTTTCTGCCTCCACTGCCTTTTTGTTGGGGGCTCTCTCCAAGACTATTGCTACCTGCTTGACTTATCCAGCTATTAGGTGTAAGGTTGTGATTCAGGCAGCAGAGAGAGAGGAAGAAAAGCTTCCAAAATCAGAAAAAGCTCGTAAAACTATCTCAAGAGTATTCTACAGCATCTGGAAAAATGAAGGAATTCTTGGATTTTTTAAGGGTTTACACGCCCAAATTTTGAAGACTGTTTTAAGCTCTGCCTTGCTTCTGATGATAAAGGAGAAGATTACAAAGTCTACTTGGGTCATGATGCTTGCTCTTAGAAAATACCTATTGACAACTAGTACAAGATTGAAAAGTGCATGA MGTKANLIVAAAAGALTVIITQPLDTASSKMQTSDFGKAKGLWKTLTEGKWSGAFDGLGISLLLTANPSIQYTVFDQLKNRLLKTNNTNSDLSPQALSASTAFLLGALSKTIATCLTYPAIRCKVVIQAAEREEEKLPKSEKARKTISRVFYSIWKNEGILGFFKGLHAQILKTVLSSALLLMIKEKITKSTWVMMLALRKYLLTTSTRLKSA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo15880.1 vs. NCBI nr
Match: gi|902170934|gb|KNA07923.1| (hypothetical protein SOVF_167360 [Spinacia oleracea]) HSP 1 Score: 396.4 bits (1017), Expect = 3.200e-107 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of Spo15880.1 vs. NCBI nr
Match: gi|731373835|ref|XP_010666768.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 355.5 bits (911), Expect = 6.400e-95 Identity = 194/214 (90.65%), Postives = 204/214 (95.33%), Query Frame = 1
BLAST of Spo15880.1 vs. NCBI nr
Match: gi|596147541|ref|XP_007222689.1| (hypothetical protein PRUPE_ppa008653mg [Prunus persica]) HSP 1 Score: 294.7 bits (753), Expect = 1.300e-76 Identity = 159/220 (72.27%), Postives = 190/220 (86.36%), Query Frame = 1
BLAST of Spo15880.1 vs. NCBI nr
Match: gi|694374723|ref|XP_009364202.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Pyrus x bretschneideri]) HSP 1 Score: 293.9 bits (751), Expect = 2.300e-76 Identity = 158/220 (71.82%), Postives = 189/220 (85.91%), Query Frame = 1
BLAST of Spo15880.1 vs. NCBI nr
Match: gi|645232656|ref|XP_008222967.1| (PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Prunus mume]) HSP 1 Score: 291.2 bits (744), Expect = 1.500e-75 Identity = 157/220 (71.36%), Postives = 189/220 (85.91%), Query Frame = 1
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMK6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167360 PE=3 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.300e-107 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DYA3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004340 PE=3 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.400e-95 Identity = 194/214 (90.65%), Postives = 204/214 (95.33%), Query Frame = 1
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Match: M5XQT2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008653mg PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 9.300e-77 Identity = 159/220 (72.27%), Postives = 190/220 (86.36%), Query Frame = 1
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Match: D7T6T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02900 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.000e-75 Identity = 158/214 (73.83%), Postives = 183/214 (85.51%), Query Frame = 1
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Match: A0A022S2W3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010293mg PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 9.600e-74 Identity = 154/217 (70.97%), Postives = 187/217 (86.18%), Query Frame = 1
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Match: PNC1_SOYBN (Peroxisomal adenine nucleotide carrier 1 OS=Glycine max GN=PNC1 PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 2.100e-74 Identity = 151/214 (70.56%), Postives = 177/214 (82.71%), Query Frame = 1
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Match: PNC2_ARATH (Peroxisomal adenine nucleotide carrier 2 OS=Arabidopsis thaliana GN=PNC2 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.400e-70 Identity = 147/216 (68.06%), Postives = 175/216 (81.02%), Query Frame = 1
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Match: PNC1_ARATH (Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana GN=PNC1 PE=1 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 5.400e-70 Identity = 143/215 (66.51%), Postives = 176/215 (81.86%), Query Frame = 1
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.400e-14 Identity = 55/211 (26.07%), Postives = 112/211 (53.08%), Query Frame = 1
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Match: ANT1_ASHGO (Peroxisomal adenine nucleotide transporter 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ANT1 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.200e-14 Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 1
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Match: AT5G27520.1 (peroxisomal adenine nucleotide carrier 2) HSP 1 Score: 266.5 bits (680), Expect = 1.400e-71 Identity = 147/216 (68.06%), Postives = 175/216 (81.02%), Query Frame = 1
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Match: AT3G05290.1 (peroxisomal adenine nucleotide carrier 1) HSP 1 Score: 265.4 bits (677), Expect = 3.000e-71 Identity = 143/215 (66.51%), Postives = 176/215 (81.86%), Query Frame = 1
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Match: AT2G39970.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 72.0 bits (175), Expect = 4.900e-13 Identity = 60/223 (26.91%), Postives = 117/223 (52.47%), Query Frame = 1
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Match: AT5G66380.1 (folate transporter 1) HSP 1 Score: 54.7 bits (130), Expect = 8.200e-8 Identity = 50/197 (25.38%), Postives = 94/197 (47.72%), Query Frame = 1
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Match: AT5G07320.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 51.2 bits (121), Expect = 9.000e-7 Identity = 57/200 (28.50%), Postives = 92/200 (46.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo15880.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo15880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo15880.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo15880.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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