Spo15323.1 (mRNA) | SpinachBase

Overview


Name	Spo15323.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	MADS-box transcription factor
Location	chr5 : 12893978 .. 12898778 (+)
Sequence length	840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGCAAATAGGGTAAAGGTTAAGTATTTACTATTTAGGGTTAGGTTAACTAATTTTATTAGGTTTGATTAGATGATTCAGGATTAAGTTCTGTTTTAACAGATGTGGTCAGTTCAATATTAAAGCTCATATTTTGGAACTATTGAGTTATGGAGTAGCATGTCCTATGTTGGTTTTGTTGTTGTTGTAAAGAGAGCCACAAGAGCAATGATGTAGACGGGACTTTGACATCAACGTTAGTATATGTGGCATGTGGTTCTAGTATTGAATCTCGTCTAAACCATTGTCTATAGTTTTTGATCTGCTTCAAAAGTGGTTTGGATACTAATTTCCTATTTAAGTTGTTGAGATGGTTTATGTTGATGTGTTAATTGGTTGAACAGCATGGAGAAGATCCTGGAGCGCTATGAAAGATACTCGTATGCAGAGAAGCAGCTGACTGCTCCTGATCCTGAATCCCGTGTACGTATGCTCATTTCATTACTAAATCAATTAATGTTCCAACCTAATTAAATTAAATTAAATTAAATTAAATTAAATACTCCGTAGTAGAGCAGAGGTTTCATATTCAATATTCAATATTCAAATTAAAATGTGGTTCAGCTAGCTAGCTGATAAATGATGCATGCATGCATGCATAATACTATTAGGTAAGCTGGACACTGGAGCATGCAAAGCTCAAGGCTAGGCTCGAGATTCTGCAGAAAAATCAAAGGTAATTATTAATTAACTTTGAGACACAACATAGTATAGAGCTGCTAGCTTGATCAATTATCTGATGAAAATTCTAAGTTATTTTGGGTATGATATTAATTGCAGGAATTACATGGGAGAAGAACTTGATACCTTGAGCCTCAAGGAACTTCAGAATTTAGAGCATCAGCTTGACAGTGCTCTTAAACACATCAGGTCCAAAAAGGTACTTTCATACCTGCATTTCCTTAATTATGTTCTGAATTTAATTAGAGCACCAGCTTGACAGTTCTCTTAAACCCTATGTCCCTAAATGATATGACATACTTGATTTCAATGGTTTAAACATGCCTAGTTGTTAAAATATATTATTGATAGGGAAAATATAATATTGTGTTGTGTTGTATTGTGTTCATACGTTTCTATTTATAATACAAACTAGATCTCCTACTCTTCATAGGTTTCCTAATTCATATAGACTTCTACCTTATATCATATAGCCTAATTATAACATAACTCTACTATATTCAATATTCTATCATATAGGATAACTGCGTTATCCTCAATACTAGTACAAGATCTTAGAATTCCCAATAATTCTCAAAGGGGTTAGGAAAATAGGAATTTAAGTAAGCCCGAATGGAAGTGCATGACAGGAACAAAATGGTGGGCGGGTCTACGCCATTTAAATAAAGAAATAGTAGTGCCAAGTAATATAGGACAAAGGAATAAGGAAAGTGTGTCAAGTAAATGAGGATGAGGGGATTATATTTGTCTTGCCAATGGGATGTGATTTGATCTGGTAGTAGTATCACAGTTCACATAATAAAACACAAATATTAAATAAAAGATCTTTACTTGGCATTCTTATTATCAAAGTCCAAAAGATGACAACATTAGCCATTAGGACTTCAACTCTTCACTTTTCAGATACATTAAGTTTAAGAGATTACTGTAGAATTCTGCAGAGATAATCAATGATACAAAATATCATCATGCATGCAAACACTGAATATGAAATTAAGACTTGAGAGCCTCACCTAAGTCTTGATACACTTATATAATTGGATGATGGTTGACGTTGTTGGTGTTTTTGTTGCTGCTGTTGCGGCTAGCTGCTACTGTTCTATCAGCCTCACCTAAGCGTTGTTACTTATGTAATTGGGTGGTTGTTGGAGGTTTTGCTGTTGTTGTTGCTGATGTTGCTGCTGCGGCTGCATGCTGTTCTGCCAGCCTGACCAAGCCTCACCAGTAATAAGAATGGAGAAATCCATTCCCATGAAGTGACTTTACCTCACATCAATTTCTTCTTATCTTTTGTTTTATACAGAAACTAGATTAAATCCCGTGCACGTACGGATTATATATGAACGGTTGTTTACAAAATATTTAACTGAATATCCCAAACTACTGCATAATTATAAAGTTTTGAATATACTCATTTAAATTAATATGCTAATGTGACCAACATATTGAGTGAGTATGTTTTCCATATTAATATACCGATTTGACTAATATATTACCAAAATATATTTAGCAAAATTATTATTACGTACTATCTATTATTGCCAGGGGCGAAGCCAAATCTTTTGTACAAGGGGGGCCGGAATTTTGTATTGGAGTACTTGTCTAATTCCCTAAAATAAAATACTACAATTTCAATAATCAATTCAACTATCTTTTTGTTGTTGTTTATTATAGTAAAATATAAATTGACCAAATTTTTTTAATATTTGAAGATACGAATCCTAAAATACTTGAACACCATAAACAAAGAAGTTTTAAGTAACACCGGATAAGTACCGTTATGTTTAAAGTAGCTAGGTAACGAAAATTAAGTAACATCTATTAAGTATTAAACGTATATATATTTTGTTGGGCAACATACTTTTTATCTATTTCCATTGAATACTTCATGAAAAATCTAAAGCACTTAAAAAATGTAATGAAAACAATAAAAGAAGTTTGAGAAACGAACATAAGTTCAATGAATTTCGTAAACAAGAAACGATAGATTTATCAAATATTACAATAATTAAAAAAAAAAAAAACAAAACAAAAAAGAAATGCTAGCAACTGGATTCGAACATGGAACTAGCACTTAGGCAGCAAACATCAAATACCAACTCAGCCAAGGAAAGGTAAGTTGTTCATTAATGCAACTTTTACAATATATTTTAGAATCTTAGGGGGGGCCATGGCCTACCTAGGCCCCCACATAGCTTCGCCCCTGATTATTGCCATAATTTATAAACTAATATTTTTTTTCGATACATAAATAGTTTATAAGAAAGGATAGAGAATAAAAATAAAATAAAATAAAACATATATTTTGTTTAGGAAACATATTTGTAGACAAACATATTTGTGGGAAAAGAGCAATGAAACATAAACAATAAAAGGAAGAATAGAGTACATATTTAGATTTGGGAAACTGGTTGCTTGGACTAGGTTTGGTTCGGGTTAATTTAATAAAGCCATATTCGGATGATGAGTCGTTTTGTTCTATTCTGTTTCGGTTCAGAATACTTTGGTTCGAGTCATGTTCAAAGTTCAAGTCTATTGTGAGTACTTATTTTGAATGAATGGTCATTTTGGGTTGGTTTTATTCGGGTTGGGTCTCTTTGGTTTAGATCAAATCATGTCATATAGTTTCAAGTACAGTTTGAGTCTTGGTTTGGTAATACAAGAAACTGTTGTATAAATTTGTAATCGTTGAAGGAAAACAAAAGAGTTAACAAACCTGTTCATCTTTGCAGAACCAAGTGATGCATGAATCAATTTCTCAGCTTCAGAAGAAGGTATAAAGCCCTAGAGAGATCATGTAAACCCGAAAAAAAATGCCAAAAATTTGTAGCATGCATCCTATTTAACTTCATTTTTATACAACAGGACAAAGCATTACAGGAACACAACAACATGCTAATCAAGAAGGTACTCATAATATCGTCCAAATTTTATGTACTCAGACTCCGTTTGGTAGGGCGTAAAACGTTTTCATTGTGAAATGATTTTTCAAGGAAAACAAAATTCCAAAATAGTTTTCCTTTGTTTGGTAAACTTAAAGGAAAATGGGAGAAGATGGTGAAGATTAAGGGGAAGAAAGGAGAGGGAGGTAAGGAGGAAAGAAGGAAAAGTGGTTTCCCTCCCTTTCAAATGTAAAAGGGTTTTCCACCTTTGAGGGAGTCATGGAAAATTGTTTTACATCCCTTACCCAACCAAACAACGTAAAATGATTGAAAAGAGGAAAATCGTTTTCCATGAAAACGTTTTACGCCCTACTAAACCTGGAGCCTCAATTAACTTGTTTTCGAAACGTTGTGTTGCTAAAGATAAACAATGTACATTGAATCAAATACAGGTGAAGGAGAAAGAGAAGGCGTTGGCGAAGCAGTCAGAAACGGATCAAGAAACATATGACCTTAACTCATCTGGTTTTTTGTCTCAGGCTTTGCCTTCATTGAACACAGTGTCAGTCCTACTAACCTCTGATTAATTTCTGCTAATTATTCGTCTAATAATGTCAATGAAGTTATGATTATTTACTGAATATGTGCAATTAATGCTTGAAATGCAGAGGAACCTGCAGCAGTGCTGTAGAAGACGATCAAACAACACAGCAACCAAGTCGTACCAACAACAACTCTACCATTATGCCGTCCTGGATGCTCCGTCATATCTCCGAGCAGTAAAAGCAAACAGATGTCAACAATGGAGATTAGTCACCAAAAAAGGAAGCTAAGTTATAATGCATATGTGCAACTTTGTAAGAAAGTATTGGGTTAGTAGAATGATGATGATGATGCAAAAAGGGTATAAGAAAGAGAGGTGGTGATGGGTTTTGTATATTATTTCCGGGTAATGCTGAGACTTCCATGGAAGAGTTGAATGAGTAGTATTAGCTGAATTTGGATCCATGGGTATTGGAGAAATGGATGCAGCTTAAATAAAGGTACATTGTTGTTGGTACTCGATCAGCAGCATGATTAAGCTGATAATGTATATATATATATATCCATCTATTTAAGCTGTTTTTAATGTATTTTGCAGTCAATACGTACGTACATCTTGTAGTTGTTTGGTTTAAGATAACTAAGGAAATGAA

mRNA sequence

ATGTTTGCAAATAGGGTAAAGGTTAACATGGAGAAGATCCTGGAGCGCTATGAAAGATACTCGTATGCAGAGAAGCAGCTGACTGCTCCTGATCCTGAATCCCGTGTAAGCTGGACACTGGAGCATGCAAAGCTCAAGGCTAGGCTCGAGATTCTGCAGAAAAATCAAAGGAATTACATGGGAGAAGAACTTGATACCTTGAGCCTCAAGGAACTTCAGAATTTAGAGCATCAGCTTGACAGTGCTCTTAAACACATCAGGTCCAAAAAGAACCAAGTGATGCATGAATCAATTTCTCAGCTTCAGAAGAAGAGGAACCTGCAGCAGTGCTGTAGAAGACGATCAAACAACACAGCAACCAAGTCGTACCAACAACAACTCTACCATTATGCCGTCCTGGATGCTCCGTCATATCTCCGAGCAGTAAAAGCAAACAGATGTCAACAATGGAGATTAGTCACCAAAAAAGGAAGCTAAGTTATAATGCATATGTGCAACTTTGTAAGAAAGTATTGGGTTAGTAGAATGATGATGATGATGCAAAAAGGGTATAAGAAAGAGAGGTGGTGATGGGTTTTGTATATTATTTCCGGGTAATGCTGAGACTTCCATGGAAGAGTTGAATGAGTAGTATTAGCTGAATTTGGATCCATGGGTATTGGAGAAATGGATGCAGCTTAAATAAAGGTACATTGTTGTTGGTACTCGATCAGCAGCATGATTAAGCTGATAATGTATATATATATATATCCATCTATTTAAGCTGTTTTTAATGTATTTTGCAGTCAATACGTACGTACATCTTGTAGTTGTTTGGTTTAAGATAACTAAGGAAATGAA

Coding sequence (CDS)

ATGTTTGCAAATAGGGTAAAGGTTAACATGGAGAAGATCCTGGAGCGCTATGAAAGATACTCGTATGCAGAGAAGCAGCTGACTGCTCCTGATCCTGAATCCCGTGTAAGCTGGACACTGGAGCATGCAAAGCTCAAGGCTAGGCTCGAGATTCTGCAGAAAAATCAAAGGAATTACATGGGAGAAGAACTTGATACCTTGAGCCTCAAGGAACTTCAGAATTTAGAGCATCAGCTTGACAGTGCTCTTAAACACATCAGGTCCAAAAAGAACCAAGTGATGCATGAATCAATTTCTCAGCTTCAGAAGAAGAGGAACCTGCAGCAGTGCTGTAGAAGACGATCAAACAACACAGCAACCAAGTCGTACCAACAACAACTCTACCATTATGCCGTCCTGGATGCTCCGTCATATCTCCGAGCAGTAAAAGCAAACAGATGTCAACAATGGAGATTAGTCACCAAAAAAGGAAGCTAA

Protein sequence

MFANRVKVNMEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSLKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQLYHYAVLDAPSYLRAVKANRCQQWRLVTKKGS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo15323	Spo15323	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo15323.1	Spo15323.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15323.1.exon.1	Spo15323.1.exon.1	exon
Spo15323.1.exon.2	Spo15323.1.exon.2	exon
Spo15323.1.exon.3	Spo15323.1.exon.3	exon
Spo15323.1.exon.4	Spo15323.1.exon.4	exon
Spo15323.1.exon.5	Spo15323.1.exon.5	exon
Spo15323.1.exon.6	Spo15323.1.exon.6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15323.1.CDS.1	Spo15323.1.CDS.1	CDS
Spo15323.1.CDS.2	Spo15323.1.CDS.2	CDS
Spo15323.1.CDS.3	Spo15323.1.CDS.3	CDS
Spo15323.1.CDS.4	Spo15323.1.CDS.4	CDS
Spo15323.1.CDS.5	Spo15323.1.CDS.5	CDS
Spo15323.1.CDS.6	Spo15323.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo15323.1.utr3p.1	Spo15323.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo15323.1 vs. NCBI nr
Match: gi|902232814|gb|KNA22806.1| (hypothetical protein SOVF_030750 [Spinacia oleracea])

HSP 1 Score: 179.5 bits (454), Expect = 4.600e-42
Identity = 99/117 (84.62%), Postives = 102/117 (87.18%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL
Sbjct: 63  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK    Q      NN   K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKDKALQ----EHNNMLIKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. NCBI nr
Match: gi|194500619|gb|ACE75945.2| (FRUITFULL [Spinacia oleracea])

HSP 1 Score: 176.4 bits (446), Expect = 3.900e-41
Identity = 97/117 (82.91%), Postives = 101/117 (86.32%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAEKQLT PDPESRVSWTLEHAKLKARL+ILQKNQRNYMGEELDTLSL
Sbjct: 63  MEKILERYERYSYAEKQLTTPDPESRVSWTLEHAKLKARLKILQKNQRNYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK    Q      NN   K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKDKALQ----EHNNMLIKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. NCBI nr
Match: gi|602908|emb|CAA56659.1| (SLM5 [Silene latifolia subsp. alba])

HSP 1 Score: 164.1 bits (414), Expect = 2.000e-37
Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAE+QLTAPDP+S VSWTLEHAKLKARLEILQKN R+YMGE+LDTLSL
Sbjct: 63  MEKILERYERYSYAERQLTAPDPDSHVSWTLEHAKLKARLEILQKNHRHYMGEDLDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQN EHQLD+ALKHIRSKKNQ+M+ESI +LQKK    Q      NNT +K  +++
Sbjct: 123 KELQNFEHQLDTALKHIRSKKNQLMYESIHELQKKDKALQ----EHNNTLSKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. NCBI nr
Match: gi|32478051|gb|AAP83387.1| (euFUL FRUITFULL-like MADS-box [Phytolacca americana])

HSP 1 Score: 161.0 bits (406), Expect = 1.700e-36
Identity = 89/118 (75.42%), Postives = 100/118 (84.75%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAE+QL  PDPES +SWTLEHAKLKAR+EILQKNQRNYMGEELDTLSL
Sbjct: 37  MEKILERYERYSYAERQLITPDPESHLSWTLEHAKLKARVEILQKNQRNYMGEELDTLSL 96

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK-RNLQQCCRRRSNNTATKSYQQQ 127
           KELQ LEHQLDSALK IRSKKNQ+M+ESISQLQKK + LQ+  +  S     K  +++
Sbjct: 97  KELQTLEHQLDSALKQIRSKKNQLMYESISQLQKKDKALQEQNKSLSKEVKEKEKEKE 154

[Close]

BLAST of Spo15323.1 vs. NCBI nr
Match: gi|731334722|ref|XP_010678364.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 159.5 bits (402), Expect = 5.000e-36
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME+ILERYER+SYAE+QLTAPDP S VS TLEHAKLKARL+ILQKNQR+YMGEELDTLSL
Sbjct: 63  MERILERYERHSYAERQLTAPDPGSHVSLTLEHAKLKARLDILQKNQRHYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQ+DSALKHIRSKKNQ+MHESISQLQ+K        +  NN  +K  +++
Sbjct: 123 KELQNLEHQIDSALKHIRSKKNQLMHESISQLQRKDK----ALKEHNNLLSKKVKER 175

[Close]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTD3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_030750 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.200e-42
Identity = 99/117 (84.62%), Postives = 102/117 (87.18%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL
Sbjct: 63  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK    Q      NN   K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKDKALQ----EHNNMLIKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Match: B3VA98_SPIOL (FRUITFULL OS=Spinacia oleracea GN=FUL PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.700e-41
Identity = 97/117 (82.91%), Postives = 101/117 (86.32%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAEKQLT PDPESRVSWTLEHAKLKARL+ILQKNQRNYMGEELDTLSL
Sbjct: 63  MEKILERYERYSYAEKQLTTPDPESRVSWTLEHAKLKARLKILQKNQRNYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK    Q      NN   K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKDKALQ----EHNNMLIKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Match: Q41356_SILLA (SLM5 protein OS=Silene latifolia GN=SLM5 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.400e-37
Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAE+QLTAPDP+S VSWTLEHAKLKARLEILQKN R+YMGE+LDTLSL
Sbjct: 63  MEKILERYERYSYAERQLTAPDPDSHVSWTLEHAKLKARLEILQKNHRHYMGEDLDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQN EHQLD+ALKHIRSKKNQ+M+ESI +LQKK    Q      NNT +K  +++
Sbjct: 123 KELQNFEHQLDTALKHIRSKKNQLMYESIHELQKKDKALQ----EHNNTLSKKVKEK 175

[Close]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Match: Q7XBL3_PHYAM (EuFUL FRUITFULL-like MADS-box (Fragment) OS=Phytolacca americana GN=PaFUL PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.200e-36
Identity = 89/118 (75.42%), Postives = 100/118 (84.75%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAE+QL  PDPES +SWTLEHAKLKAR+EILQKNQRNYMGEELDTLSL
Sbjct: 37  MEKILERYERYSYAERQLITPDPESHLSWTLEHAKLKARVEILQKNQRNYMGEELDTLSL 96

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK-RNLQQCCRRRSNNTATKSYQQQ 127
           KELQ LEHQLDSALK IRSKKNQ+M+ESISQLQKK + LQ+  +  S     K  +++
Sbjct: 97  KELQTLEHQLDSALKQIRSKKNQLMYESISQLQKKDKALQEQNKSLSKEVKEKEKEKE 154

[Close]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFD5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g113480 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.500e-36
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME+ILERYER+SYAE+QLTAPDP S VS TLEHAKLKARL+ILQKNQR+YMGEELDTLSL
Sbjct: 63  MERILERYERHSYAERQLTAPDPGSHVSLTLEHAKLKARLDILQKNQRHYMGEELDTLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQ+DSALKHIRSKKNQ+MHESISQLQ+K        +  NN  +K  +++
Sbjct: 123 KELQNLEHQIDSALKHIRSKKNQLMHESISQLQRKDK----ALKEHNNLLSKKVKER 175

[Close]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.900e-34
Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME+ILERYERYS+AEKQL   D  S VSWTLEH KLKARLE+LQ+NQ++Y+GE+L++LS+
Sbjct: 63  MERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSM 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK-RNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRS+KNQ+MHESIS LQKK R LQ+      NN  +K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQE-----QNNQLSKKVKER 175

[Close]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.300e-32
Identity = 76/118 (64.41%), Postives = 98/118 (83.05%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME++LERYERYS+AE+QL   D  S  SWTLEHAKLKARLE+LQ+NQ++Y+GE+L++L++
Sbjct: 63  MERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNM 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK-RNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQLDSALKHIRS+KNQ+MHESIS LQK+ R LQ+      NN  +K  +++
Sbjct: 123 KELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQE-----QNNQLSKKVKER 175

[Close]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.300e-30
Identity = 74/118 (62.71%), Postives = 96/118 (81.36%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME++LERYERYS+AEKQL   D  S  SWTLE+AKLKARLE+LQ+N++ Y+GE+L++L++
Sbjct: 63  MERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNM 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK-RNLQQCCRRRSNNTATKSYQQQ 127
           KELQNLEHQL SALKHIRS+KNQ+MHESIS LQK+ R LQ+      NN  +K  +++
Sbjct: 123 KELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQE-----QNNQLSKKVKER 175

[Close]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Match: CAL_BRARR (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. rapa GN=CAL PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.000e-29
Identity = 61/97 (62.89%), Postives = 89/97 (91.75%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPE--SRVSWTLEHAKLKARLEILQKNQRNYMGEELDTL 69
           MEK+LERYERYSYAEKQL APD    ++ +W++E+++LKA++E+L++NQR+Y+GE+L+++
Sbjct: 63  MEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLESI 122

Query: 70  SLKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK 105
           S+KELQNLE QLD++LKHIRS+KNQ+MHES++ LQ+K
Sbjct: 123 SIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRK 159

[Close]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Match: CAL_BRARP (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis GN=CAL PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.000e-29
Identity = 61/97 (62.89%), Postives = 89/97 (91.75%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPE--SRVSWTLEHAKLKARLEILQKNQRNYMGEELDTL 69
           MEK+LERYERYSYAEKQL APD    ++ +W++E+++LKA++E+L++NQR+Y+GE+L+++
Sbjct: 63  MEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLESI 122

Query: 70  SLKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK 105
           S+KELQNLE QLD++LKHIRS+KNQ+MHES++ LQ+K
Sbjct: 123 SIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRK 159

[Close]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.600e-30
Identity = 62/100 (62.00%), Postives = 86/100 (86.00%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           MEKILERYERYSYAE+QL AP+ +   +W++E+ +LKA++E+L++NQR+Y+GE+L  +S 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQ 110
           KELQNLE QLD+ALKHIR++KNQ+M+ESI++LQKK    Q
Sbjct: 123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQ 162

[Close]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.600e-30
Identity = 69/137 (50.36%), Postives = 102/137 (74.45%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPE--SRVSWTLEHAKLKARLEILQKNQRNYMGEELDTL 69
           MEK+LERYERYSYAE+QL APD    ++ +W++E+++LKA++E+L++NQR+Y+GEEL+ +
Sbjct: 63  MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPM 122

Query: 70  SLKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRN--------LQQCCRRRSNNTA 129
           SLK+LQNLE QL++ALKHIRS+KNQ+M+ES++ LQ+K          L +  + R N   
Sbjct: 123 SLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILR 182

Query: 130 TKSYQQQLYHYAVLDAP 137
           TK  Q +  + +V D P
Sbjct: 183 TKQTQCEQLNRSVDDVP 199

[Close]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Match: AT5G60910.1 (AGAMOUS-like 8)

HSP 1 Score: 126.7 bits (317), Expect = 1.300e-29
Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 1


		  
Query: 10  MEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLSL 69
           ME+ILERY+RY Y++KQL   D     +W LEHAKLKAR+E+L+KN+RN+MGE+LD+LSL
Sbjct: 63  MERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122

Query: 70  KELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNLQQCCRRRSNNTATKSYQQQ 127
           KELQ+LEHQLD+A+K IRS+KNQ M ESIS LQKK    Q      NN+  K  +++
Sbjct: 123 KELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQ----DHNNSLLKKIKER 175

[Close]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Match: AT3G30260.1 (AGAMOUS-like 79)

HSP 1 Score: 87.0 bits (214), Expect = 1.100e-17
Identity = 47/96 (48.96%), Postives = 73/96 (76.04%), Query Frame = 1


		  
Query: 9   NMEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQKNQRNYMGEELDTLS 68
           +ME+IL+RYER +YA + +  P+ +S+   + E +KL   +++LQ++ R+  GEE+D LS
Sbjct: 62  SMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLS 121

Query: 69  LKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKK 105
           +++LQ +E QLD+ALK  RS+KNQ+M ESI+QLQKK
Sbjct: 122 IRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKK 157

[Close]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.200e-13
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1


		  
Query: 1   MFANRVKV-------NMEKILERYERYSYAEKQLTAPDPESRVSWTLEHAKLKARLEILQ 60
           +F+NR K+       NM K L+RY++ SY   ++     +   +   E+ KLK R E LQ
Sbjct: 47  IFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQ 106

Query: 61  KNQRNYMGEELDTLSLKELQNLEHQLDSALKHIRSKKNQVMHESISQLQKKRNL 108
           + QRN +GE+L  L+ KEL+ LE QLD +LK +RS K Q M + +S LQ K  +
Sbjct: 107 RQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQM 160

The following BLAST results are available for this feature:

BLAST of Spo15323.1 vs. NCBI nr
BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
BLAST of Spo15323.1 vs. TAIR (Arabidopsis)

BLAST of Spo15323.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232814\|gb\|KNA22806.1\|	4.6e-42	84.6	hypothetical protein SOVF_0307...	[more]
gi\|194500619\|gb\|ACE75945.2\|	3.9e-41	82.9	FRUITFULL [Spinacia oleracea]	[more]
gi\|602908\|emb\|CAA56659.1\|	2.0e-37	75.2	SLM5 [Silene latifolia subsp. ...	[more]
gi\|32478051\|gb\|AAP83387.1\|	1.7e-36	75.4	euFUL FRUITFULL-like MADS-box ...	[more]
gi\|731334722\|ref\|XP_010678364.1\|	5.0e-36	74.3	PREDICTED: truncated transcrip...	[more]

BLAST of Spo15323.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RTD3_SPIOL	3.2e-42	84.6	Uncharacterized protein OS=Spi...	[more]
B3VA98_SPIOL	2.7e-41	82.9	FRUITFULL OS=Spinacia oleracea...	[more]
Q41356_SILLA	1.4e-37	75.2	SLM5 protein OS=Silene latifol...	[more]
Q7XBL3_PHYAM	1.2e-36	75.4	EuFUL FRUITFULL-like MADS-box ...	[more]
A0A0J8CFD5_BETVU	3.5e-36	74.3	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo15323.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
AGL8_SOLLC	7.9e-34	67.8	Agamous-like MADS-box protein ...	[more]
AGL8_SOLTU	3.3e-32	64.4	Agamous-like MADS-box protein ...	[more]
AGL8_SOLCO	5.3e-30	62.7	Agamous-like MADS-box protein ...	[more]
CAL_BRARR	2.0e-29	62.8	Transcription factor CAULIFLOW...	[more]
CAL_BRARP	2.0e-29	62.8	Transcription factor CAULIFLOW...	[more]

BLAST of Spo15323.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G69120.1	9.6e-30	62.0	K-box region and MADS-box tran...	[more]
AT1G26310.1	9.6e-30	50.3	K-box region and MADS-box tran...	[more]
AT5G60910.1	1.3e-29	58.9	AGAMOUS-like 8	[more]
AT3G30260.1	1.1e-17	48.9	AGAMOUS-like 79	[more]
AT5G15800.2	2.2e-13	40.3	K-box region and MADS-box tran...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 37..106 score: 3.7
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 35..128 score: 1
None	No IPR available	unknown	Coil	Coil	coord: 42..62 score: -coord: 72..92 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 10..104 score: 4.1
None	No IPR available	PANTHER	PTHR11945:SF166	SUBFAMILY NOT NAMED	coord: 10..104 score: 4.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity