Spo15037.1 (mRNA)

Overview
NameSpo15037.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionB-cell receptor-associated 31-like
LocationSpoScf_01606 : 106743 .. 112533 (-)
Sequence length2158
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATATCTCTTATCCTTCAGCCGTTAATGTTCATCGTCCCTTTCGCCGCTTTTCAGCTTCTCGGTATCACCTCTTTCTCTCTCCCCTTCCCCATTTCCTTTCTCGTTTGCGATGTCGAATTCAGTTTTCTATTTTGATTTTTAGATATTTACTGGAAGTATGAGCACCGATTGACGTGTACTTCTGAGATCGGTACTTCCACCGAGAGAGATCGCTATGAGAAATCGGTAATTGTTGTTTTGTTGTTGATTATTTAGGGTTTACGTGCCTTAATTTTGTACAATTTAATTTCTAATTTTGTTGGATTTATTATCATGATTATTTACTATCGGGAGATTAATTGCTCCTACCATCCATCATCCAATGTTTAGGAATTAGGATTAATGGGGTGGTTTAATTTCCATAGTTTACATTTTGATATTGTTGTTAATCAGTTAATGTGAAGGGCTTGGGGTTGATTCCCCGGTAGTTGTAAATTTGTAATGATGGATTGGAGGTTTTGTCGGGGCGGTGATGATACTGCATTGTTGAAAGACTCAAAATAGAGTGGAAAGGCTGAGCCTAGGGGTATTATTAGGGTCTTAACGATATGTTTAGCACTCCATTTGTTAGGTGCATTGTTAGATTCAATTTATGTCGCATTCCATTTGTTAGTTGCACTCCACAGAAAACTGAAGACGCTCTGGAATTGGATTCTCCACTCTGATCAGGAAAAAATGGACCATCATACTGCTGTTTGTTATGCAATTCTCACTCTGGCAATGGCTACTTCTTCTGCAATTCAGGTTTAATTCTTCTCTAAAACCCTTTAATTCTTCTCGAAACCCCCGAAATTGCCGAAAACTCGTTTTGTTAATTTTTGAACTTAAACCCTTTCTTTGAATTTTATTTAACTACAGATTGGCGCTCGAGATGAATTCAGGAAGACCCAAATAATCGCAACGAATTCTCCGTTCTCTATTGCACCTGAAACCCTCCAGAAGCAGATTGAGTACTTTCTTTCATCTCTTTCTTCCTTATTTTGTGTTGATATTTTACTGTTACGTATGCCCAACTGTGTAGACTTAAGTTAGTGTAGTCATTGAAGAAATTGTTAAAGATGAACCAGAAATGAGGGTAATTGATTGGTAAAGATGAACCAGAACTTTGGTAGTTTTCTGAAGTGTTGTCAACCTCTTGGAATAGAGTTGGTCCCCTTTGGTAGTTTTTTTTGTTTTCTTGAAATGTGTTGGTATCTTAAATTTACTCGTAATATCCCTTCCTCAACTTCTCACCACTTGTCGTCATGTTGTTAGTTTATGGAGTATGGCTGATCAGCATACACAAATGACACANCACCACTTGTCGTCATGTTGTTAGTTTATGGAGTATGGCTGATCAGCATACACAAATGACACAGAATTCATATCCTGTCAGAATACCAAAAACTGGATAACTTGTCCTTTTATTTCTCTTTGATAGGTTAGTTGATTATTCTCAAAGGGGGCTTTTATTTTTATATTGATTTTCTTTTGATTAAGACATGTAGTTGGTCACATTTTCTCCATCAGAGATAGTTTCTCAGTGTCTTTTACCTCTCTAAATAACTTATCACCCTCCAAGTTATGAATATCCAGCTCGATATTGATGATTTGTTCTTTACAGATGATCTGAACGAGATATAGCGTGTGTATCTAAGTATGTGTGGGGAGCAGGGGTGAGTCCAGATGACTCTGTTCTGGCAGAGGAGAATTGATTTTGTCATGTAAAAGTATCACTTAATGACACAAATCACAATGTTCATAAGCATTACTCTGAGAATCACCTGATGGATATTTATACTCTTTATATGTTTCAAGAAACTCAGTTTTGAAGAGGAAAATGAATTTCAGGGAAAATGAGCAACTCAATTTTGGTAAGGTACTGCTACTAAAAGAATACAATCATCTACTGTCTATTTCTTGCCTTATTCAATATGTGGAAAATAATACACCTTCAAATTTTTCTAACACGAGTTCTAAAACCTTTGCTTTCGACAATTTTTTCCTTCAATTTCTTATTAGATTAATTTATTGATAGCTTTAATCTAAAAGCTGAATACCAAGTCACCTTTTATCTGTCAGCTGTCAGATACAGCAGCTGAGTTTGTTTACACATCCATCTTTCAAAACACTGTAATGTAGTCAGTCTCTTGCAAGAGGTCCAGAACATTTTGCTGTTCTCTTTGGTAGTTTTGGTTCTATCTTCGGTACTTCTAGAAAAAGGGTTGCAGACCACTCAGATCATCTTTTCTTTACCTTTAACGTATACTAAATATTTTGAGACTCAAATTTTTAATACTTCGTATGTAGTTTTTAATACTACAAAGCTTAAAAGTTATGAATTTGTTTTTTGTTTTGTTTAATCGACTTTTCTTTTCCAATGTGCAACAGTGCAAGGATGTTGAGATCAAGCTATCCTTGTTCAAGTATGCTCACATTTGTAAAAGAACTGATTAAAAAAGTCCACGTGAATTTTTCTTATAAGCATGCTCATAGTCTGCTAGTCATTACTTTTTTTTCTGAAGCCATGCTAGTCATTACATGAATATGGAGAAGAATAAGCATCACCTGATTTTTTAGTTCAGGGATTTTTGTATAGAAGGGTTATAATAGGGTATAAATTGAAATGCATTCTGATTGATACTTGAATTTTGTTTGAAATTTCCTCTTCCAACTTTTATTGCAGCTGCTTTCATGTAGATAATCAAGCTGTCTCTTCTAGTGCCCCCGACTAGGGTTAGTTTATACATTTCTTTTCTACAAACTGCTACCAATGCTGAAGTGTCAATTTAGACTAAAGTGTTTGATTCATCTGGTAGCTTCATCTCACTGCATGTTTTCTGTGTCTTTTTCTTGTTTTAGAACAAAACTAACTCCACCACTCCGGCCGTAGTCTGTGGTGCTTTTTGTGCTATATTCGGTGCTATTGCCCTTGATTCCGGGAAGTCCGATGCTGCTGCAAAAGTGTTCTTGAATGTTCATGCTCGCACTGGTGAATTAGCTGCTGATTTTTAGGTAAGCCTCAGAATCATAATGGCTGCATCCTACTATGAACTCATGTTTTGTGAATCATTTCTGTATATTGTATGGTGTATTAGCTTTATGTATGCCGTAGAAGTAGTATGACCAGGAACTCCATTCTGAATCTGTATTACTCTGAATCTTCTGTGAGGCTAATAGAGTCTATCCACTGGAGTTTCTCTGTGGGATCTTTCTGAATTTGGTTCAAACAATTGAATTTTGTTTCTTTATTTCGACAACTAAACTAAACTGATTATCAAATTGAGTCTGCAAGTCAAGCTAGGTGTTCATTTAGGGACATTCAAGTTAGAAATTTGTGATGAGGCGGGCTTGGTGCTGTTAGGTGCTCACGAATTGATGCAGCAAAGTTGTGTGGTGGTCAAGACTGGTTTAATTAGATAAGTGAAATTGTTAGACTAGATACATGAATGTAGAAATGTTAGGGAAATTGTGTTGTTATTAGGGCTACAAGGACTGTTTCTTAATTGATGGAGTAATTAAGATGGTAAGGCTACTACGGTAAAGTCTGATCAGTACGATACAAGATGGAAGGAAGTAGACTAAAATTCCTATATTTGATAAACTACCTTGATCTATCTTCTGCTGTCGTGGAAACGAGCAGTATGTGGTGTGTGCAAGGGGCACAAAACCAGATTGTGGAAGAGAAAAGGAGGGTTTTAATCATGCAGTTTGCAAAGAACATGAAACCTTAGTGGGAGTAGTCACTGTAGTGCTTACTTTTGTTGATATCTGAAGTTCTTGGTATTCAGGTGTTGCTTTTTATTTTTTTGTAGGGTAGTTGATTTCTGCGTGTATTATATGTGATCAGCATTTATGTACTTTTTCTTTTTAATTTGAAAGTGGAAGTAGTCTCTAGAGTATTAATCTTTTATCAACTTTTAATTTCTTGGTTGGATAGTTGATTACTGCCTGTATCATGCATTTGCATTAGCAGTCAACATTAGCTTGTCAACTTGGTTATGTAATGTGTGATCATCCTTTGAAATTTGAACTCACATGATTTCTTCTCCCCTTTCAACTGCCTAGATTTACAAATTGGCTGTTCTTTTTCTTTTTCCCTTTTTGTTTGTTTGTGACGCGGCTTCGATATATGTTGTCAATTACGTAGTAACTGGTTGAGATCTACTTCCTCATACTGGGTTGTTACTCGTTACACCAATACAATTATGCTATGTAAGTTTTTTTTTTTTTGATAAAATTATGCTATGTAAGTAACGTGTATTTTTTTTTCCAATTTTATCAGAGGTTTCCTAAGAGACAATTAATNAGTAACGTGTATTTTTTTTTCCAATTTTATCAGAGGTTTCCTAAGAGACAATTAATGTGAATTGTATATGTCTTGAATTTTTATTACGTTAGGGTGAAGAGTCACTAAGCAGCTCATATTTGACCAAAGTTACCATCATGTTTAATAAGCATAATTTTAACTTTATAAGACTCGTTACAATCTATTTATGCACCTATAAGGCTCATTGCGTTGTTGTAGGTCATATTTAGGCTAAAATGACATTTTCGCTCCCAACTTTGAACTTAAGAACCTAAGGACTCATTTGAAACTTATTATATGATTAATATGCTTAGTTTTAAGTTTCTAAGACTTATTGTAATCTATTTATGCACATTTAATGCTTGTTTGATCGTTATAGGTCATATTTAGGCTAAAATGAGGCATTTTCGCTCCCAACTTTAAAATAAAGAATCTAAGGACTCATTTTAAACTTATTACATGTTTAATATGCATAATTTTAACTTTGTAAGACTCGTTACAATCTATTTATGCACCTTTAAGGCTCATTGGGTCTTTGTAAGCCATATTTAGGCTAAAATGACATTTTCGCTCCCAACTTTGAACTAAAGAACCTAAGGACTCATGTTAAACTTACTAAATGTTTTATATGCTTAGTTTTAACTTTCTAGGACTCATTACAATCCATTTATGCACATTTAAGACTCATTGTGTCGTTATAGGTCATATTTAGGCTAAAATGACATTTTCGCTCCCAACTTTAAACTTAAGAACCTAAGGACTCATTTTAAACTTATTATATGATTAATATGCTTAATTTTAAGTTTCTATGACTTATTCTAATCTATTTATGCACATTTAATTCTTGTTTGATCGTTATAGGTCATATTTAGGCTAAAATGAGGCATTTTCGCTCCCAACTTTGAAAAAGAACCTAAGGACTCATTTTAAACTTATTACATGTTTAATATGCATAATTTAAACTTTCTAAGACTCGTTCCAATTTAGTGTGATACCCCAATATTTTATGATTTCGTAAAATATATTTATATAGAAAATGAAGTTATAAATACTATTAAATTATTTTCCGTATTTAATTAGTCTCTTTAATATTTTCGGAAAATTAAAATAACAATTTTAAATCTAGTAGGATTCTTATTGTGAACAACTATAAGTACTACTTAAACCCTATTTAATTGCGGCAGCCCTAATTATATTTTCTTATTCTTAACTTTGTTCTGCCGTTTTCATAGCTTCGTTCCCACTTGTGCGTGAGTTGAACCATCAGCATCAAATCCATTCCTCTTCGCCTAATCATCAAAACCATTATGGTGCCATAGCATGCAAAAACACAAAACCACCAATTCCATTATACCCATTATCATGTATTTAACAATCCTTATCAAGCCTAAACGTTGTTCTTCGGTCGTACTGAGCAATGAGCGCTTCAACGCCCATTCGTCTTGTTCTCAATAAGTAGCG

mRNA sequence

TTAATATCTCTTATCCTTCAGCCGTTAATGTTCATCGTCCCTTTCGCCGCTTTTCAGCTTCTCGATATTTACTGGAAGTATGAGCACCGATTGACGTGTACTTCTGAGATCGGTACTTCCACCGAGAGAGATCGCTATGAGAAATCGAGTGGAAAGGCTGAGCCTAGGGGTATTATTAGGGTCTTAACGATATGTTTAGCACTCCATTTGTTAGGTGCATTGTTAGATTCAATTTATGTCGCATTCCATTTGTTAGTTGCACTCCACAGAAAACTGAAGACGCTCTGGAATTGGATTCTCCACTCTGATCAGGAAAAAATGGACCATCATACTGCTGTTTGTTATGCAATTCTCACTCTGGCAATGGCTACTTCTTCTGCAATTCAGATTGGCGCTCGAGATGAATTCAGGAAGACCCAAATAATCGCAACGAATTCTCCGTTCTCTATTGCACCTGAAACCCTCCAGAAGCAGATTGAAAACTCAGTTTTGAAGAGGAAAATGAATTTCAGGGAAAATGAGCAACTCAATTTTGGTAAGATAATCAAGCTGTCTCTTCTAGTGCCCCCGACTAGGAACAAAACTAACTCCACCACTCCGGCCGTAGTCTGTGGTGCTTTTTGTGCTATATTCGGTGCTATTGCCCTTGATTCCGGGAAGTCCGATGCTGCTGCAAAAGTGTTCTTGAATGTTCATGCTCGCACTGGTGAATTAGCTGCTGATTTTTAGGTAAGCCTCAGAATCATAATGGCTGCATCCTACTATGAACTCATGTTTTGTGAATCATTTCTGTATATTGTATGGTGTATTAGCTTTATGTATGCCGTAGAAGTAGTATGACCAGGAACTCCATTCTGAATCTGTATTACTCTGAATCTTCTGTGAGGCTAATAGAGTCTATCCACTGGAGTTTCTCTGTGGGATCTTTCTGAATTTGGTTCAAACAATTGAATTTTGTTTCTTTATTTCGACAACTAAACTAAACTGATTATCAAATTGAGTCTGCAAGTCAAGCTAGGTGTTCATTTAGGGACATTCAAGTTAGAAATTTGTGATGAGGCGGGCTTGGTGCTGTTAGGTGCTCACGAATTGATGCAGCAAAGTTGTGTGGTGGTCAAGACTGGTTTAATTAGATAAGTGAAATTGTTAGACTAGATACATGAATGTAGAAATGTTAGGGAAATTGTGTTGTTATTAGGGCTACAAGGACTGTTTCTTAATTGATGGAGTAATTAAGATGGTAAGGCTACTACGGTAAAGTCTGATCAGTACGATACAAGATGGAAGGAAGTAGACTAAAATTCCTATATTTGATAAACTACCTTGATCTATCTTCTGCTGTCGTGGAAACGAGCAGTATGTGGTGTGTGCAAGGGGCACAAAACCAGATTGTGGAAGAGAAAAGGAGGGTTTTAATCATGCAGTTTGCAAAGAACATGAAACCTTAGTGGGAGTAGTCACTGTAGTGCTTACTTTTGTTGATATCTGAAGTTCTTGGTATTCAGGTGTTGCTTTTTATTTTTTTGTAGGGTAGTTGATTTCTGCGTGTATTATATGTGATCAGCATTTATGTACTTTTTCTTTTTAATTTGAAAGTGGAAGTAGTCTCTAGAGTATTAATCTTTTATCAACTTTTAATTTCTTGGTTGGATAGTTGATTACTGCCTGTATCATGCATTTGCATTAGCAGTCAACATTAGCTTGTCAACTTGGTTATGTAATGTGTGATCATCCTTTGAAATTTGAACTCACATGATTTCTTCTCCCCTTTCAACTGCCTAGATTTACAAATTGGCTGTTCTTTTTCTTTTTCCCTTTTTGTTTGTTTGTGACGCGGCTTCGATATATGTTGTCAATTACGTAGTAACTGGTTGAGATCTACTTCCTCATACTGGGTTGTTACTCGTTACACCAATACAATTATGCTATCTTCGTTCCCACTTGTGCGTGAGTTGAACCATCAGCATCAAATCCATTCCTCTTCGCCTAATCATCAAAACCATTATGGTGCCATAGCATGCAAAAACACAAAACCACCAATTCCATTATACCCATTATCATGTATTTAACAATCCTTATCAAGCCTAAACGTTGTTCTTCGGTCGTACTGAGCAATGAGCGCTTCAACGCCCATTCGTCTTGTTCTCAATAAGTAGCG

Coding sequence (CDS)

ATGTTCATCGTCCCTTTCGCCGCTTTTCAGCTTCTCGATATTTACTGGAAGTATGAGCACCGATTGACGTGTACTTCTGAGATCGGTACTTCCACCGAGAGAGATCGCTATGAGAAATCGAGTGGAAAGGCTGAGCCTAGGGGTATTATTAGGGTCTTAACGATATGTTTAGCACTCCATTTGTTAGGTGCATTGTTAGATTCAATTTATGTCGCATTCCATTTGTTAGTTGCACTCCACAGAAAACTGAAGACGCTCTGGAATTGGATTCTCCACTCTGATCAGGAAAAAATGGACCATCATACTGCTGTTTGTTATGCAATTCTCACTCTGGCAATGGCTACTTCTTCTGCAATTCAGATTGGCGCTCGAGATGAATTCAGGAAGACCCAAATAATCGCAACGAATTCTCCGTTCTCTATTGCACCTGAAACCCTCCAGAAGCAGATTGAAAACTCAGTTTTGAAGAGGAAAATGAATTTCAGGGAAAATGAGCAACTCAATTTTGGTAAGATAATCAAGCTGTCTCTTCTAGTGCCCCCGACTAGGAACAAAACTAACTCCACCACTCCGGCCGTAGTCTGTGGTGCTTTTTGTGCTATATTCGGTGCTATTGCCCTTGATTCCGGGAAGTCCGATGCTGCTGCAAAAGTGTTCTTGAATGTTCATGCTCGCACTGGTGAATTAGCTGCTGATTTTTAG

Protein sequence

MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKSSGKAEPRGIIRVLTICLALHLLGALLDSIYVAFHLLVALHRKLKTLWNWILHSDQEKMDHHTAVCYAILTLAMATSSAIQIGARDEFRKTQIIATNSPFSIAPETLQKQIENSVLKRKMNFRENEQLNFGKIIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAADF
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo15037Spo15037gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo15037.1Spo15037.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo15037.1.utr5p.1Spo15037.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo15037.1.CDS.7Spo15037.1.CDS.7CDS
Spo15037.1.CDS.6Spo15037.1.CDS.6CDS
Spo15037.1.CDS.5Spo15037.1.CDS.5CDS
Spo15037.1.CDS.4Spo15037.1.CDS.4CDS
Spo15037.1.CDS.3Spo15037.1.CDS.3CDS
Spo15037.1.CDS.2Spo15037.1.CDS.2CDS
Spo15037.1.CDS.1Spo15037.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo15037.1.utr3p.2Spo15037.1.utr3p.2three_prime_UTR
Spo15037.1.utr3p.1Spo15037.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo15037.1.exon.8Spo15037.1.exon.8exon
Spo15037.1.exon.7Spo15037.1.exon.7exon
Spo15037.1.exon.6Spo15037.1.exon.6exon
Spo15037.1.exon.5Spo15037.1.exon.5exon
Spo15037.1.exon.4Spo15037.1.exon.4exon
Spo15037.1.exon.3Spo15037.1.exon.3exon
Spo15037.1.exon.2Spo15037.1.exon.2exon
Spo15037.1.exon.1Spo15037.1.exon.1exon


Homology
[Close]
BLAST of Spo15037.1 vs. NCBI nr
Match: gi|902163621|gb|KNA06857.1| (hypothetical protein SOVF_177200 isoform B [Spinacia oleracea])

HSP 1 Score: 139.0 bits (349), Expect = 1.000e-29
Identity = 96/188 (51.06%), Postives = 106/188 (56.38%), Query Frame = 1 

		  

Query: 98  MDHHTAVCYAILTLAMATSSAIQIGARDEFRKTQIIATNSPFSIAPETLQKQIENS---- 157
           MD  TAVC+AILTLAMATSSAIQIGARDEFRKTQII TNSPFSIA ETLQKQI+ S    
Sbjct: 1   MDRRTAVCFAILTLAMATSSAIQIGARDEFRKTQIITTNSPFSIALETLQKQIDYSFQRI 60

Query: 158 -VLKRKMNFRENEQLNFGKIIKLSLLVPPT-------------RNKTNSTTPA------- 217
            +L+R M      + N   +  L   +  T              +KT +   A       
Sbjct: 61  DLLRRAMTHASFSEENNRALSILGTSIIETSVAFRYLLDDIDISSKTLNREIAEVCNVES 120

Query: 218 ---------------------------VVCGAFCAIFGAIALDSGKSDAAAKVFLNVHAR 234
                                      VVCGAF AIFGA+ALDSGKSDAAAKVFLNVH R
Sbjct: 121 SCAVDGMRLGLHKVLRVSHKTNSTTPAVVCGAFRAIFGAVALDSGKSDAAAKVFLNVHTR 180
[Close]
BLAST of Spo15037.1 vs. NCBI nr
Match: gi|902163620|gb|KNA06856.1| (hypothetical protein SOVF_177200 isoform A [Spinacia oleracea])

HSP 1 Score: 134.0 bits (336), Expect = 3.300e-28
Identity = 96/190 (50.53%), Postives = 106/190 (55.79%), Query Frame = 1 

		  

Query: 98  MDHHTAVCYAILTLAMATSSAIQ--IGARDEFRKTQIIATNSPFSIAPETLQKQIENS-- 157
           MD  TAVC+AILTLAMATSSAIQ  IGARDEFRKTQII TNSPFSIA ETLQKQI+ S  
Sbjct: 1   MDRRTAVCFAILTLAMATSSAIQLQIGARDEFRKTQIITTNSPFSIALETLQKQIDYSFQ 60

Query: 158 ---VLKRKMNFRENEQLNFGKIIKLSLLVPPT-------------RNKTNSTTPA----- 217
              +L+R M      + N   +  L   +  T              +KT +   A     
Sbjct: 61  RIDLLRRAMTHASFSEENNRALSILGTSIIETSVAFRYLLDDIDISSKTLNREIAEVCNV 120

Query: 218 -----------------------------VVCGAFCAIFGAIALDSGKSDAAAKVFLNVH 234
                                        VVCGAF AIFGA+ALDSGKSDAAAKVFLNVH
Sbjct: 121 ESSCAVDGMRLGLHKVLRVSHKTNSTTPAVVCGAFRAIFGAVALDSGKSDAAAKVFLNVH 180
[Close]
BLAST of Spo15037.1 vs. NCBI nr
Match: gi|902159901|gb|KNA06367.1| (hypothetical protein SOVF_181690, partial [Spinacia oleracea])

HSP 1 Score: 123.2 bits (308), Expect = 5.800e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 172 IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA 231
           IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA
Sbjct: 1   IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA 60

Query: 232 DF 234
           DF
Sbjct: 61  DF 62
[Close]
BLAST of Spo15037.1 vs. NCBI nr
Match: gi|902121043|gb|KNA04004.1| (hypothetical protein SOVF_203740, partial [Spinacia oleracea])

HSP 1 Score: 85.9 bits (211), Expect = 1.000e-13
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 

		  

Query: 1  MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKS 41
          MFIVPFAAFQLLDIYWKYEHRLTCTSEIGT+TERDRYEKS
Sbjct: 34 MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTATERDRYEKS 73
[Close]
BLAST of Spo15037.1 vs. NCBI nr
Match: gi|902143230|gb|KNA04829.1| (hypothetical protein SOVF_196060 [Spinacia oleracea])

HSP 1 Score: 85.1 bits (209), Expect = 1.800e-13
Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 1 

		  

Query: 1   MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKSSGKAEPRGIIRVLTICL 58
           MFIVPFAAFQLLDIYWKYEHRLTCTSEI T+TERDRYEKS  K++ R ++     CL
Sbjct: 46  MFIVPFAAFQLLDIYWKYEHRLTCTSEICTATERDRYEKSIYKSQ-RNVLLCSAACL 101
[Close]
BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHW2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177200 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.100e-30
Identity = 96/188 (51.06%), Postives = 106/188 (56.38%), Query Frame = 1 

		  

Query: 98  MDHHTAVCYAILTLAMATSSAIQIGARDEFRKTQIIATNSPFSIAPETLQKQIENS---- 157
           MD  TAVC+AILTLAMATSSAIQIGARDEFRKTQII TNSPFSIA ETLQKQI+ S    
Sbjct: 1   MDRRTAVCFAILTLAMATSSAIQIGARDEFRKTQIITTNSPFSIALETLQKQIDYSFQRI 60

Query: 158 -VLKRKMNFRENEQLNFGKIIKLSLLVPPT-------------RNKTNSTTPA------- 217
            +L+R M      + N   +  L   +  T              +KT +   A       
Sbjct: 61  DLLRRAMTHASFSEENNRALSILGTSIIETSVAFRYLLDDIDISSKTLNREIAEVCNVES 120

Query: 218 ---------------------------VVCGAFCAIFGAIALDSGKSDAAAKVFLNVHAR 234
                                      VVCGAF AIFGA+ALDSGKSDAAAKVFLNVH R
Sbjct: 121 SCAVDGMRLGLHKVLRVSHKTNSTTPAVVCGAFRAIFGAVALDSGKSDAAAKVFLNVHTR 180
[Close]
BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJW2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177200 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.300e-28
Identity = 96/190 (50.53%), Postives = 106/190 (55.79%), Query Frame = 1 

		  

Query: 98  MDHHTAVCYAILTLAMATSSAIQ--IGARDEFRKTQIIATNSPFSIAPETLQKQIENS-- 157
           MD  TAVC+AILTLAMATSSAIQ  IGARDEFRKTQII TNSPFSIA ETLQKQI+ S  
Sbjct: 1   MDRRTAVCFAILTLAMATSSAIQLQIGARDEFRKTQIITTNSPFSIALETLQKQIDYSFQ 60

Query: 158 ---VLKRKMNFRENEQLNFGKIIKLSLLVPPT-------------RNKTNSTTPA----- 217
              +L+R M      + N   +  L   +  T              +KT +   A     
Sbjct: 61  RIDLLRRAMTHASFSEENNRALSILGTSIIETSVAFRYLLDDIDISSKTLNREIAEVCNV 120

Query: 218 -----------------------------VVCGAFCAIFGAIALDSGKSDAAAKVFLNVH 234
                                        VVCGAF AIFGA+ALDSGKSDAAAKVFLNVH
Sbjct: 121 ESSCAVDGMRLGLHKVLRVSHKTNSTTPAVVCGAFRAIFGAVALDSGKSDAAAKVFLNVH 180
[Close]
BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGI2_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_181690 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.000e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

		  

Query: 172 IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA 231
           IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA
Sbjct: 1   IIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNVHARTGELAA 60

Query: 232 DF 234
           DF
Sbjct: 61  DF 62
[Close]
BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9S3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_203740 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.200e-14
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 1 

		  

Query: 1  MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKS 41
          MFIVPFAAFQLLDIYWKYEHRLTCTSEIGT+TERDRYEKS
Sbjct: 34 MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTATERDRYEKS 73
[Close]
BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QC27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196060 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.200e-13
Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 1 

		  

Query: 1   MFIVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKSSGKAEPRGIIRVLTICL 58
           MFIVPFAAFQLLDIYWKYEHRLTCTSEI T+TERDRYEKS  K++ R ++     CL
Sbjct: 46  MFIVPFAAFQLLDIYWKYEHRLTCTSEICTATERDRYEKSIYKSQ-RNVLLCSAACL 101
[Close]
BLAST of Spo15037.1 vs. ExPASy Swiss-Prot
Match: NFD2_ARATH (Protein NUCLEAR FUSION DEFECTIVE 2 OS=Arabidopsis thaliana GN=NFD2 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.500e-6
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1 

		  

Query: 163 ENEQLNFGKIIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNV 222
           + ++L  GKII++S        KT+++  A++C  F AIFGAIA+D+G  D A KVF  V
Sbjct: 127 DGDRLGLGKIIRVS-------TKTDASNSAILCTGFRAIFGAIAIDAGTVDEAIKVFWKV 186

Query: 223 H-ARTGELAA 232
           H AR G L +
Sbjct: 187 HGARAGRLVS 189
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BLAST of Spo15037.1 vs. TAIR (Arabidopsis)
Match: AT3G17780.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 70.5 bits (171), Expect = 1.600e-12
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 1 

		  

Query: 3   IVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKSSGKAEPRGIIRVLTICL 58
           IV FA FQLLDIYWK EHRL C+SE+ T+TERDR+EKS  KA+  G++    I L
Sbjct: 48  IVAFAGFQLLDIYWKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILL 102
[Close]
BLAST of Spo15037.1 vs. TAIR (Arabidopsis)
Match: AT1G48440.1 (B-cell receptor-associated 31-like)

HSP 1 Score: 68.9 bits (167), Expect = 4.600e-12
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 1 

		  

Query: 3   IVPFAAFQLLDIYWKYEHRLTCTSEIGTSTERDRYEKSSGKAEPRGIIRVLTICLALHLL 62
           IV FA FQLLDIYWK EHRL+C+SE+ T+TERDRYEKS  KA+     R + +C A  LL
Sbjct: 48  IVAFAGFQLLDIYWKAEHRLSCSSEVCTATERDRYEKSIYKAQ-----RNVVLCAAGILL 102
[Close]
BLAST of Spo15037.1 vs. TAIR (Arabidopsis)
Match: AT1G24450.1 (Ribonuclease III family protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.000e-7
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1 

		  

Query: 163 ENEQLNFGKIIKLSLLVPPTRNKTNSTTPAVVCGAFCAIFGAIALDSGKSDAAAKVFLNV 222
           + ++L  GKII++S        KT+++  A++C  F AIFGAIA+D+G  D A KVF  V
Sbjct: 127 DGDRLGLGKIIRVS-------TKTDASNSAILCTGFRAIFGAIAIDAGTVDEAIKVFWKV 186

Query: 223 H-ARTGELAA 232
           H AR G L +
Sbjct: 187 HGARAGRLVS 189
The following BLAST results are available for this feature:
BLAST of Spo15037.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902163621|gb|KNA06857.1|1.0e-2951.0hypothetical protein SOVF_1772... [more]
gi|902163620|gb|KNA06856.1|3.3e-2850.5hypothetical protein SOVF_1772... [more]
gi|902159901|gb|KNA06367.1|5.8e-25100.hypothetical protein SOVF_1816... [more]
gi|902121043|gb|KNA04004.1|1.0e-1397.5hypothetical protein SOVF_2037... [more]
gi|902143230|gb|KNA04829.1|1.8e-1373.6hypothetical protein SOVF_1960... [more]
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BLAST of Spo15037.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QHW2_SPIOL7.1e-3051.0Uncharacterized protein OS=Spi... [more]
A0A0K9QJW2_SPIOL2.3e-2850.5Uncharacterized protein OS=Spi... [more]
A0A0K9QGI2_SPIOL4.0e-25100.Uncharacterized protein (Fragm... [more]
A0A0K9Q9S3_SPIOL7.2e-1497.5Uncharacterized protein (Fragm... [more]
A0A0K9QC27_SPIOL1.2e-1373.6Uncharacterized protein OS=Spi... [more]
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BLAST of Spo15037.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NFD2_ARATH3.5e-644.2Protein NUCLEAR FUSION DEFECTI... [more]
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BLAST of Spo15037.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G17780.11.6e-1261.8FUNCTIONS IN: molecular_functi... [more]
AT1G48440.14.6e-1261.6B-cell receptor-associated 31-... [more]
AT1G24450.12.0e-744.2Ribonuclease III family protei... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..40
score: 2.4
NoneNo IPR availablePANTHERPTHR12701:SF20GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5coord: 1..40
score: 2.4

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane