Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCACAATTAGAGGTATGGTTGCATCCTCAATATTTAGTAATTACTCAGTAGCATATATTCTTACTTTTCCTGTGCATTTTTGTAATCGCAACCTACATATATCGATACCCATCTAAGTTTTTTTCAGTTTTCCTGCCTAAAAAATGCAGAGACCTCGAGTCACCGAGATAAATGTCCGCATGGACTGCAATGGGTGTGTGCAGAAGATCAAAAAGGCGCTCAACGGCGTTACTGGTAAGTAATCACAGATAATCTGCTCATTAAACCAATTTATCAGCATCATTTTCATACTAATTCTGCTTGTCTGCAGGGATATATGATCTCTACATCGACTTTCCCCAGCAGAAGTTAACAATAATTGGATGGGCAGATCCTGAAAGAATCATCAAAGCTATAAAGAAAGTCAGGAAAGTTGCTACCATCTGTTCTCATACAGAAGCACCGGATCCGAATTCCCAGCCATCTGAACCACCACCACCAGCATCAGATGGAGGGGCACCACCACCTGAAGGAGGGGCACCACCACCAGATGGAGGAAGCGCTCAGCCAGCTGAGCCTCCGAAATCAGAAGCAGCACCCCCGCCACCACAAGAACCACAACAAGATCAACCCCCACCTCCACAACCACCTGAAAATTCACAGGATCAAAATCCACAACCTGACTCAAATCCTCCAGCTGAACCCCAGCAAAGCCAGCCAACAAACACTTACAGACCAAAGGATGTAGAGGAGGTTCATGTGGTATACCGCAATCCGCCTGACTACAGTTATAGATATGGTCATAGCAACGGGTACGGACCTGGATACAGTCATGGCTATGGTGGACACTGGAGCAATCAACCAGGACCTAGTTATAGACATGAACGATCCCCTCAACCTGTTTATCATGAGCCACCACCTCAATCTGTTTATCACGAGCCACAACCTCAATCTCTTTATCATGAGCGTCCTAGGCCCATCTATCATGAGCCACCACCTCATCGTGTATATCATGAGCCACCACCTCGTCCTACTTATCACGACCAACCATCTCAACCTATTTATCATGAACCACCATCTCAACCTAATTATCATGAACCACCATCACAGCCTATTTATCGTGAGCCACCATCTCAACCTATTTACCGTGAGCCATCATCTCAACCTATTTATCGTGAGCCAGCACCAAGAACTGTTTACCATGAACAACCACCTCAACCTCTTCGCACAACTCACAGTTATAACATGTACAGGCCATCAACTCCCATCACAGAATACCAATATGTACAACCACCACCACCACCACCACCACCACAATACACAACTTATGGCATGATGGACCAATATAATATGGATCCATATCGGAACAGTGCTTCTAGTAATGGGAATGTTACATCAATCTTCAGTGATGAAAATCCAAATGCATGTACAATTGTATAGGTACAAGAATTTCATTGCGAATAGAAAATCCTATTTCGTAGTCCATTCATGATGCTTGGTTGGAAAGCTAGGTGGCCATAGCATAACATTACGTGGCAGTAATTAACAATATAAGCCTGTGATAATGCTGTGACAGGAATAAGATTCTTGCTTGTGGCTAGAGAAGAACTGATGCCAAATTCGAGGGCTGGCATACAGCCTTGTCAAACCAATATATTAAAGGAAATACGCACATTTATTTTATACTCAACTTCTATTTTTTTTTACATAAAAAATCCTATAGTTATCATCAACAAAGGGGTCCCGCTTTATGCATCAAAAGTTATTCCTCCATAGTCCATTCTAGCAATTCAACATGATTGAAATGTATAAATTTCATGATATATTCCGCATTACTTTCTGTAAACTAAATGCCTGAACAGGAGAAGAAACAAATGAAGTATCTACCATGTCCTTCTAATTTATTCAGAAGCAATTCACCCTTCAACATTTTAGGGTTTAGGGTTTAGTATCTACCACGTTAAGGTTTCAAGTGACCTGATGAAGGTGAATGAGCAGGTCATTTCACTTAATTAGAAAATTAGATACAGACAATCATAGCGCACTAGAATATATCTTGATACACCCAGAATTCATCTTCAACAAGTTCCTCAATGAATTGCTGTTGTTTTACCTCTCAGCAACAATATCATACTGTTTTGGAGAAAACCTAATTAGTCGGTATCAATTCGATCCAAGTAATCCAACCTAGTCAATACCAGCCGTCCAGCACAATATCAATCTATAAGGTCATAAAAGCCTGGGCGCTTAAATAGCAATCTTCAACTATGACCTACAATTTATGTCACTATGTAAAAGAATGTTGTGAAGACAACGGAATAATTCAGCTGATTTGTTTGCTAATAATAAGTTGCATTGGCCAACAAGAAGCTTGTGAAGATTTTCCT ATGGCTTCACAATTAGAGAGACCTCGAGTCACCGAGATAAATGTCCGCATGGACTGCAATGGGTGTGTGCAGAAGATCAAAAAGGCGCTCAACGGCGTTACTGGGATATATGATCTCTACATCGACTTTCCCCAGCAGAAGTTAACAATAATTGGATGGGCAGATCCTGAAAGAATCATCAAAGCTATAAAGAAAGTCAGGAAAGTTGCTACCATCTGTTCTCATACAGAAGCACCGGATCCGAATTCCCAGCCATCTGAACCACCACCACCAGCATCAGATGGAGGGGCACCACCACCTGAAGGAGGGGCACCACCACCAGATGGAGGAAGCGCTCAGCCAGCTGAGCCTCCGAAATCAGAAGCAGCACCCCCGCCACCACAAGAACCACAACAAGATCAACCCCCACCTCCACAACCACCTGAAAATTCACAGGATCAAAATCCACAACCTGACTCAAATCCTCCAGCTGAACCCCAGCAAAGCCAGCCAACAAACACTTACAGACCAAAGGATGTAGAGGAGGTTCATGTGGTATACCGCAATCCGCCTGACTACAGTTATAGATATGGTCATAGCAACGGGTACGGACCTGGATACAGTCATGGCTATGGTGGACACTGGAGCAATCAACCAGGACCTAGTTATAGACATGAACGATCCCCTCAACCTGTTTATCATGAGCCACCACCTCAATCTGTTTATCACGAGCCACAACCTCAATCTCTTTATCATGAGCGTCCTAGGCCCATCTATCATGAGCCACCACCTCATCGTGTATATCATGAGCCACCACCTCGTCCTACTTATCACGACCAACCATCTCAACCTATTTATCATGAACCACCATCTCAACCTAATTATCATGAACCACCATCACAGCCTATTTATCGTGAGCCACCATCTCAACCTATTTACCGTGAGCCATCATCTCAACCTATTTATCGTGAGCCAGCACCAAGAACTGTTTACCATGAACAACCACCTCAACCTCTTCGCACAACTCACAGTTATAACATGTACAGGCCATCAACTCCCATCACAGAATACCAATATGTACAACCACCACCACCACCACCACCACCACAATACACAACTTATGGCATGATGGACCAATATAATATGGATCCATATCGGAACAGTGCTTCTAGTAATGGGAATGTTACATCAATCTTCAGTGATGAAAATCCAAATGCATGTACAATTGTATAGGTACAAGAATTTCATTGCGAATAGAAAATCCTATTTCGTAGTCCATTCATGATGCTTGGTTGGAAAGCTAGGTGGCCATAGCATAACATTACGTGGCAGTAATTAACAATATAAGCCTGTGATAATGCTGTGACAGGAATAAGATTCTTGCTTGTGGCTAGAGAAGAACTGATGCCAAATTCGAGGGCTGGCATACAGCCTTGTCAAACCAATATATTAAAGGAAATACGCACATTTATTTTATACTCAACTTCTATTTTTTTTTACATAAAAAATCCTATAGTTATCATCAACAAAGGGGTCCCGCTTTATGCATCAAAAGTTATTCCTCCATAGTCCATTCTAGCAATTCAACATGATTGAAATGTATAAATTTCATGATATATTCCGCATTACTTTCTGTAAACTAAATGCCTGAACAGGAGAAGAAACAAATGAAGTATCTACCATGTCCTTCTAATTTATTCAGAAGCAATTCACCCTTCAACATTTTAGGGTTTAGGGTTTAGTATCTACCACGTTAAGGTTTCAAGTGACCTGATGAAGGTGAATGAGCAGGTCATTTCACTTAATTAGAAAATTAGATACAGACAATCATAGCGCACTAGAATATATCTTGATACACCCAGAATTCATCTTCAACAAGTTCCTCAATGAATTGCTGTTGTTTTACCTCTCAGCAACAATATCATACTGTTTTGGAGAAAACCTAATTAGTCGGTATCAATTCGATCCAAGTAATCCAACCTAGTCAATACCAGCCGTCCAGCACAATATCAATCTATAAGGTCATAAAAGCCTGGGCGCTTAAATAGCAATCTTCAACTATGACCTACAATTTATGTCACTATGTAAAAGAATGTTGTGAAGACAACGGAATAATTCAGCTGATTTGTTTGCTAATAATAAGTTGCATTGGCCAACAAGAAGCTTGTGAAGATTTTCCT ATGGCTTCACAATTAGAGAGACCTCGAGTCACCGAGATAAATGTCCGCATGGACTGCAATGGGTGTGTGCAGAAGATCAAAAAGGCGCTCAACGGCGTTACTGGGATATATGATCTCTACATCGACTTTCCCCAGCAGAAGTTAACAATAATTGGATGGGCAGATCCTGAAAGAATCATCAAAGCTATAAAGAAAGTCAGGAAAGTTGCTACCATCTGTTCTCATACAGAAGCACCGGATCCGAATTCCCAGCCATCTGAACCACCACCACCAGCATCAGATGGAGGGGCACCACCACCTGAAGGAGGGGCACCACCACCAGATGGAGGAAGCGCTCAGCCAGCTGAGCCTCCGAAATCAGAAGCAGCACCCCCGCCACCACAAGAACCACAACAAGATCAACCCCCACCTCCACAACCACCTGAAAATTCACAGGATCAAAATCCACAACCTGACTCAAATCCTCCAGCTGAACCCCAGCAAAGCCAGCCAACAAACACTTACAGACCAAAGGATGTAGAGGAGGTTCATGTGGTATACCGCAATCCGCCTGACTACAGTTATAGATATGGTCATAGCAACGGGTACGGACCTGGATACAGTCATGGCTATGGTGGACACTGGAGCAATCAACCAGGACCTAGTTATAGACATGAACGATCCCCTCAACCTGTTTATCATGAGCCACCACCTCAATCTGTTTATCACGAGCCACAACCTCAATCTCTTTATCATGAGCGTCCTAGGCCCATCTATCATGAGCCACCACCTCATCGTGTATATCATGAGCCACCACCTCGTCCTACTTATCACGACCAACCATCTCAACCTATTTATCATGAACCACCATCTCAACCTAATTATCATGAACCACCATCACAGCCTATTTATCGTGAGCCACCATCTCAACCTATTTACCGTGAGCCATCATCTCAACCTATTTATCGTGAGCCAGCACCAAGAACTGTTTACCATGAACAACCACCTCAACCTCTTCGCACAACTCACAGTTATAACATGTACAGGCCATCAACTCCCATCACAGAATACCAATATGTACAACCACCACCACCACCACCACCACCACAATACACAACTTATGGCATGATGGACCAATATAATATGGATCCATATCGGAACAGTGCTTCTAGTAATGGGAATGTTACATCAATCTTCAGTGATGAAAATCCAAATGCATGTACAATTGTATAG MASQLERPRVTEINVRMDCNGCVQKIKKALNGVTGIYDLYIDFPQQKLTIIGWADPERIIKAIKKVRKVATICSHTEAPDPNSQPSEPPPPASDGGAPPPEGGAPPPDGGSAQPAEPPKSEAAPPPPQEPQQDQPPPPQPPENSQDQNPQPDSNPPAEPQQSQPTNTYRPKDVEEVHVVYRNPPDYSYRYGHSNGYGPGYSHGYGGHWSNQPGPSYRHERSPQPVYHEPPPQSVYHEPQPQSLYHERPRPIYHEPPPHRVYHEPPPRPTYHDQPSQPIYHEPPSQPNYHEPPSQPIYREPPSQPIYREPSSQPIYREPAPRTVYHEQPPQPLRTTHSYNMYRPSTPITEYQYVQPPPPPPPPQYTTYGMMDQYNMDPYRNSASSNGNVTSIFSDENPNACTIV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo13185.1 vs. NCBI nr
Match: gi|902178045|gb|KNA09065.1| (hypothetical protein SOVF_157020 isoform A [Spinacia oleracea]) HSP 1 Score: 787.3 bits (2032), Expect = 1.200e-224 Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 1
BLAST of Spo13185.1 vs. NCBI nr
Match: gi|902178046|gb|KNA09066.1| (hypothetical protein SOVF_157020 isoform B [Spinacia oleracea]) HSP 1 Score: 778.1 bits (2008), Expect = 7.500e-222 Identity = 396/399 (99.25%), Postives = 398/399 (99.75%), Query Frame = 1
BLAST of Spo13185.1 vs. NCBI nr
Match: gi|731320644|ref|XP_010670922.1| (PREDICTED: extensin-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 484.6 bits (1246), Expect = 1.700e-133 Identity = 281/414 (67.87%), Postives = 309/414 (74.64%), Query Frame = 1
BLAST of Spo13185.1 vs. NCBI nr
Match: gi|731320640|ref|XP_010670920.1| (PREDICTED: extensin-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 480.7 bits (1236), Expect = 2.500e-132 Identity = 279/410 (68.05%), Postives = 307/410 (74.88%), Query Frame = 1
BLAST of Spo13185.1 vs. NCBI nr
Match: gi|313184295|emb|CBL94161.1| (putative copper-binding family protein [Malus domestica]) HSP 1 Score: 233.8 bits (595), Expect = 5.300e-58 Identity = 181/415 (43.61%), Postives = 225/415 (54.22%), Query Frame = 1
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QP87_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_157020 PE=4 SV=1) HSP 1 Score: 787.3 bits (2032), Expect = 8.600e-225 Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 1
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_157020 PE=4 SV=1) HSP 1 Score: 778.1 bits (2008), Expect = 5.200e-222 Identity = 396/399 (99.25%), Postives = 398/399 (99.75%), Query Frame = 1
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRY4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048110 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.200e-133 Identity = 281/414 (67.87%), Postives = 309/414 (74.64%), Query Frame = 1
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKU4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g048110 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.700e-132 Identity = 279/410 (68.05%), Postives = 307/410 (74.88%), Query Frame = 1
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Match: E4Z8N6_MALDO (Putative copper-binding family protein OS=Malus domestica PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.700e-58 Identity = 181/415 (43.61%), Postives = 225/415 (54.22%), Query Frame = 1
BLAST of Spo13185.1 vs. ExPASy Swiss-Prot
Match: HIP25_ARATH (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana GN=HIPP25 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.600e-6 Identity = 19/55 (34.55%), Postives = 38/55 (69.09%), Query Frame = 1
BLAST of Spo13185.1 vs. ExPASy Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.000e-6 Identity = 19/64 (29.69%), Postives = 42/64 (65.62%), Query Frame = 1
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Match: AT4G08570.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.800e-8 Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 1
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.400e-8 Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 1
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 4.100e-8 Identity = 21/61 (34.43%), Postives = 41/61 (67.21%), Query Frame = 1
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Match: AT1G29100.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 5.300e-8 Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 1
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Match: AT4G35060.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 2.000e-7 Identity = 19/55 (34.55%), Postives = 38/55 (69.09%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13185.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13185.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13185.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo13185.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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