Spo12249.1 (mRNA) | SpinachBase

Overview


Name	Spo12249.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING/U-box superfamily protein, putative
Location	chr2 : 3810147 .. 3811286 (-)
Sequence length	1140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCGGCGGAACTTCCGGCGGTGTTGACGGCCCCTCCACCACTACATCCTTCTCATATCCACCGCAACATTACTTCTGCTACGAATGCAACCGCACGGTCTCTATATCTCCATCGTCTCCCTCAGACGAGCTTTCTTGCCCCAATTGCAATGGCGGTTTCCTTGAAGAAGTTGAAAACCCTAACCCTTTCCCTTCTCCTTCTCCTCTCGCTCAATTCTTCTCTCCTCCTACCTCCTCCGCCGCCGATCAGCTTGCTCCTTTCGCCCCTTTTCTCTTTCCTCAATCCTCTTCCGCCGCCTCCTCTTCTCCTATTGAGCCTATAGACCTCTCCTCCATCTTCAGCGGAGGAGTTGTTGGCGGCGGCGGTGGTAATCAGAGATCCCCTTTCCAAGACACTGATGTATTCAACCCTTTCCAATTTTTGCAAAGTTATCTCCAGACCATGCGTGCTGGTGGCGCCAACATCCAATTCGTCATCGAAAACACTTCCCCGGACCAAGGCGGTGGAAATATTCGGGTTCCGTCGAATTTAGGGGACTATTTCTTTGGCCCAGGGTTGGAGCAATTGATTCAGCAGCTAGCGGAGAACGATCCTAATCGGTACGGCACGCCTCCGGCTGCAAAATCATCCGTTGAGGGGCTCCCGAGCGTTAAGGTTACCGAAGAATTGCTGTCTTCTGATTCTTCTCAATGTGCAGTTTGTATGGATGAGTTTGAGCTTGGCGCTGAGGCGAAACAGATGCCCTGCAAGCATTTTTTTCATTCTGATTGCATTTTTCCGTGGTTGGAATTGCATAATTCTTGCCCTGTCTGCCGGTATGAGCTTCCAACCGATGACCCCGAATACGAGCAGAGGAGTCGTGTCAGGAGAGAGAATCTTGGATCTGGTGGCAATGTCAATGATGGTGGCAGTGGTAATGATGGAAATGGTGATGATATGGATGTGTCGGAGGAGGGTTCGCAAAATGATCGGACTGTCGAGAGGAGGTTTAGGATTTCTTTCCCTTGGTCATTTGGAGCTGTTGGATCTGCGGCGGAGGGGAGTAATTCATCGGGGGATCGCAGCGACTCGAACCCTCGACGAAGGGAGAATCCGGACTTTGGACCAGAAACCAGAACAGAGGATCTTGATTGA

mRNA sequence

ATGTCTTCCGGCGGAACTTCCGGCGGTGTTGACGGCCCCTCCACCACTACATCCTTCTCATATCCACCGCAACATTACTTCTGCTACGAATGCAACCGCACGGTCTCTATATCTCCATCGTCTCCCTCAGACGAGCTTTCTTGCCCCAATTGCAATGGCGGTTTCCTTGAAGAAGTTGAAAACCCTAACCCTTTCCCTTCTCCTTCTCCTCTCGCTCAATTCTTCTCTCCTCCTACCTCCTCCGCCGCCGATCAGCTTGCTCCTTTCGCCCCTTTTCTCTTTCCTCAATCCTCTTCCGCCGCCTCCTCTTCTCCTATTGAGCCTATAGACCTCTCCTCCATCTTCAGCGGAGGAGTTGTTGGCGGCGGCGGTGGTAATCAGAGATCCCCTTTCCAAGACACTGATGTATTCAACCCTTTCCAATTTTTGCAAAGTTATCTCCAGACCATGCGTGCTGGTGGCGCCAACATCCAATTCGTCATCGAAAACACTTCCCCGGACCAAGGCGGTGGAAATATTCGGGTTCCGTCGAATTTAGGGGACTATTTCTTTGGCCCAGGGTTGGAGCAATTGATTCAGCAGCTAGCGGAGAACGATCCTAATCGGTACGGCACGCCTCCGGCTGCAAAATCATCCGTTGAGGGGCTCCCGAGCGTTAAGGTTACCGAAGAATTGCTGTCTTCTGATTCTTCTCAATGTGCAGTTTGTATGGATGAGTTTGAGCTTGGCGCTGAGGCGAAACAGATGCCCTGCAAGCATTTTTTTCATTCTGATTGCATTTTTCCGTGGTTGGAATTGCATAATTCTTGCCCTGTCTGCCGGTATGAGCTTCCAACCGATGACCCCGAATACGAGCAGAGGAGTCGTGTCAGGAGAGAGAATCTTGGATCTGGTGGCAATGTCAATGATGGTGGCAGTGGTAATGATGGAAATGGTGATGATATGGATGTGTCGGAGGAGGGTTCGCAAAATGATCGGACTGTCGAGAGGAGGTTTAGGATTTCTTTCCCTTGGTCATTTGGAGCTGTTGGATCTGCGGCGGAGGGGAGTAATTCATCGGGGGATCGCAGCGACTCGAACCCTCGACGAAGGGAGAATCCGGACTTTGGACCAGAAACCAGAACAGAGGATCTTGATTGA

Coding sequence (CDS)

ATGTCTTCCGGCGGAACTTCCGGCGGTGTTGACGGCCCCTCCACCACTACATCCTTCTCATATCCACCGCAACATTACTTCTGCTACGAATGCAACCGCACGGTCTCTATATCTCCATCGTCTCCCTCAGACGAGCTTTCTTGCCCCAATTGCAATGGCGGTTTCCTTGAAGAAGTTGAAAACCCTAACCCTTTCCCTTCTCCTTCTCCTCTCGCTCAATTCTTCTCTCCTCCTACCTCCTCCGCCGCCGATCAGCTTGCTCCTTTCGCCCCTTTTCTCTTTCCTCAATCCTCTTCCGCCGCCTCCTCTTCTCCTATTGAGCCTATAGACCTCTCCTCCATCTTCAGCGGAGGAGTTGTTGGCGGCGGCGGTGGTAATCAGAGATCCCCTTTCCAAGACACTGATGTATTCAACCCTTTCCAATTTTTGCAAAGTTATCTCCAGACCATGCGTGCTGGTGGCGCCAACATCCAATTCGTCATCGAAAACACTTCCCCGGACCAAGGCGGTGGAAATATTCGGGTTCCGTCGAATTTAGGGGACTATTTCTTTGGCCCAGGGTTGGAGCAATTGATTCAGCAGCTAGCGGAGAACGATCCTAATCGGTACGGCACGCCTCCGGCTGCAAAATCATCCGTTGAGGGGCTCCCGAGCGTTAAGGTTACCGAAGAATTGCTGTCTTCTGATTCTTCTCAATGTGCAGTTTGTATGGATGAGTTTGAGCTTGGCGCTGAGGCGAAACAGATGCCCTGCAAGCATTTTTTTCATTCTGATTGCATTTTTCCGTGGTTGGAATTGCATAATTCTTGCCCTGTCTGCCGGTATGAGCTTCCAACCGATGACCCCGAATACGAGCAGAGGAGTCGTGTCAGGAGAGAGAATCTTGGATCTGGTGGCAATGTCAATGATGGTGGCAGTGGTAATGATGGAAATGGTGATGATATGGATGTGTCGGAGGAGGGTTCGCAAAATGATCGGACTGTCGAGAGGAGGTTTAGGATTTCTTTCCCTTGGTCATTTGGAGCTGTTGGATCTGCGGCGGAGGGGAGTAATTCATCGGGGGATCGCAGCGACTCGAACCCTCGACGAAGGGAGAATCCGGACTTTGGACCAGAAACCAGAACAGAGGATCTTGATTGA

Protein sequence

MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGGNVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDSNPRRRENPDFGPETRTEDLD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12249	Spo12249	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12249.1	Spo12249.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12249.1.CDS.1	Spo12249.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12249.1.exon.1	Spo12249.1.exon.1	exon

Homology

[Close]

BLAST of Spo12249.1 vs. NCBI nr
Match: gi|902230530|gb|KNA21890.1| (hypothetical protein SOVF_039190 [Spinacia oleracea])

HSP 1 Score: 760.0 bits (1961), Expect = 2.000e-216
Identity = 379/380 (99.74%), Postives = 379/380 (99.74%), Query Frame = 1


		  
Query: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60
           MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE
Sbjct: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60

Query: 61  NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 120
           NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV
Sbjct: 61  NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 120

Query: 121 GGGGG-NQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180
           GGGGG NQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL
Sbjct: 121 GGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240

Query: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300
           FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG
Sbjct: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300

Query: 301 NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS 360
           NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS
Sbjct: 301 NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS 360

Query: 361 NPRRRENPDFGPETRTEDLD 380
           NPRRRENPDFGPETRTEDLD
Sbjct: 361 NPRRRENPDFGPETRTEDLD 380

[Close]

BLAST of Spo12249.1 vs. NCBI nr
Match: gi|731351871|ref|XP_010687250.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 548.9 bits (1413), Expect = 7.000e-153
Identity = 293/384 (76.30%), Postives = 311/384 (80.99%), Query Frame = 1


		  
Query: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60
           MSSGG+SG       T   S P Q YFCYECNRTVSIS  S S EL CPNCNGGFLEEVE
Sbjct: 1   MSSGGSSGASTAGGPT--LSPPQQFYFCYECNRTVSISNPSSSSELFCPNCNGGFLEEVE 60

Query: 61  NPNPFPSP-SPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGV 120
           NPNPFP P SP   F S P+SSAADQLAPFAPF+FP SSS     PI PIDLSSIF GG+
Sbjct: 61  NPNPFPPPFSPF--FSSSPSSSAADQLAPFAPFMFPPSSSPP---PINPIDLSSIFGGGI 120

Query: 121 VGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180
              GG N RS FQD DVFNP QFLQ+YLQTMRAGGANIQFVIEN   D GGGN RVPSNL
Sbjct: 121 ANVGG-NSRSAFQDPDVFNPLQFLQNYLQTMRAGGANIQFVIENAGGDHGGGNFRVPSNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKS+VEGLPS+KVTEELL+SDSS CAVCM+E
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSAVEGLPSIKVTEELLNSDSSDCAVCMNE 240

Query: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300
           FELGAEAKQMPCKH FHSDCI PWLELHNSCPVCRYELPTDDPEYE+R+R RREN  SGG
Sbjct: 241 FELGAEAKQMPCKHVFHSDCILPWLELHNSCPVCRYELPTDDPEYEERARGRRENTESGG 300

Query: 301 NVNDGGSGN----DGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGD 360
           N N GG+G     +G+G+     EEGSQNDRTVERRFRIS PW F A GSAAEGSN+SG 
Sbjct: 301 NANGGGAGGNSNANGDGEGDGGLEEGSQNDRTVERRFRISLPWPFSAAGSAAEGSNTSG- 360

Query: 361 RSDSNPRRRENPDFGPETRTEDLD 380
            S+SN +RRENPDFG ETR EDLD
Sbjct: 361 -SESNQQRRENPDFGSETRQEDLD 374

[Close]

BLAST of Spo12249.1 vs. NCBI nr
Match: gi|658002068|ref|XP_008393509.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica])

HSP 1 Score: 377.5 bits (968), Expect = 2.800e-101
Identity = 229/403 (56.82%), Postives = 272/403 (67.49%), Query Frame = 1


		  
Query: 2   SSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVEN 61
           SSGG SG V GP         PQ YFC+ C+RTVS++PS P+ +L CP C+GGFLEE+E 
Sbjct: 3   SSGGHSGSVGGPIA-------PQLYFCHRCDRTVSLTPS-PTYDLVCPLCSGGFLEEMET 62

Query: 62  PNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSS--AASSSPIEPI---DLSSIFS 121
           PNP P+P P   FFS P+S A    +   P LF  S+S  A  S+P       DLSS+F 
Sbjct: 63  PNPNPNPFPPNPFFSFPSSDAPPFASSGFPLLFSSSASGPAPDSAPAPANLADDLSSLF- 122

Query: 122 GGVVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGN---I 181
                GG  ++ SPFQD D FNPF FLQ+YLQT+RA GAN+QFVI+  SP  GGG+    
Sbjct: 123 -----GGAPSRSSPFQDPDAFNPFVFLQNYLQTLRANGANVQFVIDG-SPGGGGGDPFGF 182

Query: 182 RVPSNL--GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSS 241
           RVP+NL  GDYFFGPG+EQLIQQLAENDPNRYGTPPA+KS++  LP VK++EELL+SDSS
Sbjct: 183 RVPTNLNLGDYFFGPGIEQLIQQLAENDPNRYGTPPASKSAIVALPVVKISEELLASDSS 242

Query: 242 QCAVCMDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVR 301
           QCAVC D FELG EAKQMPCKH +HSDCI PWLELHNSCPVCR+ELPTDDPEYEQR R  
Sbjct: 243 QCAVCKDSFELGEEAKQMPCKHLYHSDCILPWLELHNSCPVCRHELPTDDPEYEQRIRGD 302

Query: 302 REN--------LGSGGNVNDGGSGNDGNGDDMDVS----EEGSQNDRTVERRFRISFPWS 361
             N           G N++ GG G+ G+G  + +     +  S + RTVERRF IS P  
Sbjct: 303 SGNGNQTSQSAAPGGTNISMGGGGS-GSGFGLGIGTPSLDNPSPSPRTVERRFTISLPRF 362

Query: 362 FGAVGSAAEGSNS-SGDRSDSNP--RRRENPDFGPETRTEDLD 380
           FGA+G  AE SN+ SG+  +SN   R R NP    E R EDLD
Sbjct: 363 FGALGGPAETSNTGSGNNEESNSGNRGRHNPG-SEEPRQEDLD 388

[Close]

BLAST of Spo12249.1 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 370.5 bits (950), Expect = 3.400e-99
Identity = 219/392 (55.87%), Postives = 254/392 (64.80%), Query Frame = 1


		  
Query: 2   SSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVEN 61
           SSGG SGG  G   +      PQ YFC++CNRTVSI+PS P+ +L CP C GGFLEEV+N
Sbjct: 3   SSGGNSGG-GGIGISA-----PQPYFCHQCNRTVSITPS-PTSDLVCPVCGGGFLEEVQN 62

Query: 62  PNPFPSPSPLAQF-FSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 121
           PNP P PSP + F FS   SS     A   P LF  +SS+         DL ++F     
Sbjct: 63  PNPSPEPSPNSFFSFSSDDSSFG---ARGFPLLFTTTSSSGHGGGALVDDLPALF----- 122

Query: 122 GGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLG 181
            GG   + S  +DTD FNPF FLQ+YLQT+RA GAN+QFVI+    D  G  +    NLG
Sbjct: 123 -GGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLG 182

Query: 182 DYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEF 241
           DYFFGPGLEQLIQQLAENDPNRYGTPPA+KS++EGLPSVK+TEELL+SDSSQCAVC D F
Sbjct: 183 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTF 242

Query: 242 ELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSR-----VRRENL 301
           ELG EAKQMPCKH +HS+CI PWLELHNSCPVCRYELPTDDP+YEQR+R       +   
Sbjct: 243 ELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQA 302

Query: 302 GSGGNVNDGGSGNDGNGDDMD---VSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGS-- 361
             G N++ GG   +  GD       S E  Q  R VERRF IS P  F   GS AE S  
Sbjct: 303 AGGFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRFTISLPQLFRVFGSTAETSNT 362

Query: 362 ---NSSGDRSDSNPRRRENPDFGPETRTEDLD 380
              N++G+   SN   R N   G E R EDLD
Sbjct: 363 GSGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]

BLAST of Spo12249.1 vs. NCBI nr
Match: gi|694330457|ref|XP_009355932.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Pyrus x bretschneideri])

HSP 1 Score: 370.5 bits (950), Expect = 3.400e-99
Identity = 222/398 (55.78%), Postives = 267/398 (67.09%), Query Frame = 1


		  
Query: 2   SSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE- 61
           SSGG SG V GP         PQ YFC++C+RTVS++PS P+ +L CP C+GGFLEE+E 
Sbjct: 3   SSGGHSGSVGGPIA-------PQLYFCHQCDRTVSLTPS-PTSDLVCPLCSGGFLEEMET 62

Query: 62  -NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPID-LSSIFSGG 121
            NPNPFP P+P   FFS P+S A    +   P LF  S+S ++  P    D LS++F   
Sbjct: 63  PNPNPFP-PNP---FFSFPSSDAPPFASSGFPLLFSSSASGSAPGPANIADDLSALF--- 122

Query: 122 VVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGG--GNIRVP 181
              GG   + SPF D D FNPF FLQ+YLQT+RA GAN+QFVI++T P  GG     R P
Sbjct: 123 ---GGAPQRSSPFHDPDAFNPFVFLQNYLQTLRANGANVQFVIDST-PGGGGDPSGFRAP 182

Query: 182 SNL--GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCA 241
           +NL  GDYFFGPGLEQLIQQLAENDPNRYGTPPA+KS+++ L  VK++E+LL+SDSSQCA
Sbjct: 183 TNLNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALLVVKISEDLLASDSSQCA 242

Query: 242 VCMDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRREN 301
           VC D FELG EAKQMPCKH +HSDCI PWLELHN+CPVCR+ELPTDDPEYEQR RV   N
Sbjct: 243 VCKDSFELGEEAKQMPCKHIYHSDCILPWLELHNTCPVCRHELPTDDPEYEQRIRVDSGN 302

Query: 302 --------LGSGGNVNDGGSGND---GNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAV 361
                      G N++ GG G+    G G      +  S + RTVERRF IS P  F  +
Sbjct: 303 GNQTGQSGARGGANISMGGGGSSSGFGFGIGAPSPDNQSPSPRTVERRFTISLPRFFRPL 362

Query: 362 GSAAEGSNS-SGDRSDSNPRRRENPDFGP-ETRTEDLD 380
           G  AE SN+ SG+  +SN   R  P+ GP E R EDLD
Sbjct: 363 GGTAETSNTGSGNNEESNSGNRGGPNSGPEEPRQEDLD 381

[Close]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQS8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039190 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 1.400e-216
Identity = 379/380 (99.74%), Postives = 379/380 (99.74%), Query Frame = 1


		  
Query: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60
           MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE
Sbjct: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60

Query: 61  NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 120
           NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV
Sbjct: 61  NPNPFPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 120

Query: 121 GGGGG-NQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180
           GGGGG NQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL
Sbjct: 121 GGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240

Query: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300
           FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG
Sbjct: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300

Query: 301 NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS 360
           NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS
Sbjct: 301 NVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDS 360

Query: 361 NPRRRENPDFGPETRTEDLD 380
           NPRRRENPDFGPETRTEDLD
Sbjct: 361 NPRRRENPDFGPETRTEDLD 380

[Close]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUY0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g188770 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 4.900e-153
Identity = 293/384 (76.30%), Postives = 311/384 (80.99%), Query Frame = 1


		  
Query: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60
           MSSGG+SG       T   S P Q YFCYECNRTVSIS  S S EL CPNCNGGFLEEVE
Sbjct: 1   MSSGGSSGASTAGGPT--LSPPQQFYFCYECNRTVSISNPSSSSELFCPNCNGGFLEEVE 60

Query: 61  NPNPFPSP-SPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGV 120
           NPNPFP P SP   F S P+SSAADQLAPFAPF+FP SSS     PI PIDLSSIF GG+
Sbjct: 61  NPNPFPPPFSPF--FSSSPSSSAADQLAPFAPFMFPPSSSPP---PINPIDLSSIFGGGI 120

Query: 121 VGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNL 180
              GG N RS FQD DVFNP QFLQ+YLQTMRAGGANIQFVIEN   D GGGN RVPSNL
Sbjct: 121 ANVGG-NSRSAFQDPDVFNPLQFLQNYLQTMRAGGANIQFVIENAGGDHGGGNFRVPSNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDE 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKS+VEGLPS+KVTEELL+SDSS CAVCM+E
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSAVEGLPSIKVTEELLNSDSSDCAVCMNE 240

Query: 241 FELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGG 300
           FELGAEAKQMPCKH FHSDCI PWLELHNSCPVCRYELPTDDPEYE+R+R RREN  SGG
Sbjct: 241 FELGAEAKQMPCKHVFHSDCILPWLELHNSCPVCRYELPTDDPEYEERARGRRENTESGG 300

Query: 301 NVNDGGSGN----DGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGD 360
           N N GG+G     +G+G+     EEGSQNDRTVERRFRIS PW F A GSAAEGSN+SG 
Sbjct: 301 NANGGGAGGNSNANGDGEGDGGLEEGSQNDRTVERRFRISLPWPFSAAGSAAEGSNTSG- 360

Query: 361 RSDSNPRRRENPDFGPETRTEDLD 380
            S+SN +RRENPDFG ETR EDLD
Sbjct: 361 -SESNQQRRENPDFGSETRQEDLD 374

[Close]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.400e-99
Identity = 219/392 (55.87%), Postives = 254/392 (64.80%), Query Frame = 1


		  
Query: 2   SSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVEN 61
           SSGG SGG  G   +      PQ YFC++CNRTVSI+PS P+ +L CP C GGFLEEV+N
Sbjct: 3   SSGGNSGG-GGIGISA-----PQPYFCHQCNRTVSITPS-PTSDLVCPVCGGGFLEEVQN 62

Query: 62  PNPFPSPSPLAQF-FSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVV 121
           PNP P PSP + F FS   SS     A   P LF  +SS+         DL ++F     
Sbjct: 63  PNPSPEPSPNSFFSFSSDDSSFG---ARGFPLLFTTTSSSGHGGGALVDDLPALF----- 122

Query: 122 GGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLG 181
            GG   + S  +DTD FNPF FLQ+YLQT+RA GAN+QFVI+    D  G  +    NLG
Sbjct: 123 -GGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLG 182

Query: 182 DYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEF 241
           DYFFGPGLEQLIQQLAENDPNRYGTPPA+KS++EGLPSVK+TEELL+SDSSQCAVC D F
Sbjct: 183 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTF 242

Query: 242 ELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSR-----VRRENL 301
           ELG EAKQMPCKH +HS+CI PWLELHNSCPVCRYELPTDDP+YEQR+R       +   
Sbjct: 243 ELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQA 302

Query: 302 GSGGNVNDGGSGNDGNGDDMD---VSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGS-- 361
             G N++ GG   +  GD       S E  Q  R VERRF IS P  F   GS AE S  
Sbjct: 303 AGGFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRFTISLPQLFRVFGSTAETSNT 362

Query: 362 ---NSSGDRSDSNPRRRENPDFGPETRTEDLD 380
              N++G+   SN   R N   G E R EDLD
Sbjct: 363 GSGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Match: A5C2A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042386 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.200e-96
Identity = 212/389 (54.50%), Postives = 251/389 (64.52%), Query Frame = 1


		  
Query: 3   SGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENP 62
           SGG+ GG  GP      S  PQ YFCY+CN TVSI+PS  SD L CP+CN GFLEEVENP
Sbjct: 7   SGGSGGGGGGPG---GGSAAPQSYFCYQCNLTVSITPSPTSDPL-CPHCNDGFLEEVENP 66

Query: 63  NPFPSPSPLAQFFS-----PPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDL-SSIFS 122
           NP P P P+   F      P  S+A      F P +F   S+AA  S    IDL +S+  
Sbjct: 67  NPNPIPVPIPNPFLGFSDLPSLSAAGATATAFPPLVF---STAAGGS----IDLQNSVDF 126

Query: 123 GGVVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVP 182
            G+ G           D D F+PF FLQ+YLQT+RAGG N+QFVI+  SP+   G  R+ 
Sbjct: 127 PGLFGA----------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPE---GTFRLS 186

Query: 183 SNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVC 242
            NLGDYF GPGLEQLIQQLAENDPNRYGTPPA+KS++EGLP++++T ELL +DSSQCAVC
Sbjct: 187 PNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVC 246

Query: 243 MDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLG 302
            D FEL  EAKQMPCKH +H+DCI PWLELHNSCPVCRYELPTDDP+YE R+R  + N  
Sbjct: 247 KDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVN-Q 306

Query: 303 SGGN----VNDGGSGNDGNGDDMDVSEEGS----QNDRTVERRFRISFPWSFGAVGSAAE 362
           +GGN       G + N  +G     +  G     Q  RT +R FRISFPW F   GS AE
Sbjct: 307 TGGNAAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPAE 366

Query: 363 GSNSSGDRSDSNPRRRENPDFGPETRTED 378
            SNS+ D  +SNP  R N + G E R  D
Sbjct: 367 TSNSNND-GESNPGNRANQESGSENRQGD 369

[Close]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Match: F6HVS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 6.000e-95
Identity = 210/389 (53.98%), Postives = 249/389 (64.01%), Query Frame = 1


		  
Query: 3   SGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENP 62
           SGG+ GG  G  +       PQ YFCY+CN TVSI+PS  SD L CP+CN GFLEEVENP
Sbjct: 7   SGGSGGGGPGGGSAA-----PQSYFCYQCNLTVSITPSPTSDPL-CPHCNDGFLEEVENP 66

Query: 63  NPFPSPSPLAQFFS-----PPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDL-SSIFS 122
           NP P P P+   F      P  S+A      F P +F   S+AA  S    IDL +S+  
Sbjct: 67  NPNPIPVPIPNPFLGFSDLPSLSAAGATATAFPPLVF---STAAGGS----IDLQNSVDF 126

Query: 123 GGVVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVP 182
            G+ G           D D F+PF FLQ+YLQT+RAGG N+QFVI+  SP+   G  R+ 
Sbjct: 127 PGLFGA----------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPE---GTFRLS 186

Query: 183 SNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVC 242
            NLGDYF GPGLEQLIQQLAENDPNRYGTPPA+KS++EGLP++++T ELL +DSSQCAVC
Sbjct: 187 PNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVC 246

Query: 243 MDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLG 302
            D FEL  EAKQMPCKH +H+DCI PWLELHNSCPVCRYELPTDDP+YE R+R  + N  
Sbjct: 247 KDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVN-Q 306

Query: 303 SGGN----VNDGGSGNDGNGDDMDVSEEGS----QNDRTVERRFRISFPWSFGAVGSAAE 362
           +GGN       G + N  +G     +  G     Q  RT +R FRISFPW F   GS AE
Sbjct: 307 TGGNAAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRISFPWPFRTFGSPAE 366

Query: 363 GSNSSGDRSDSNPRRRENPDFGPETRTED 378
            SNS+ D   SNP  R N + G E R  D
Sbjct: 367 TSNSNND-GGSNPGNRANQESGSENRQGD 367

[Close]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.300e-85
Identity = 191/385 (49.61%), Postives = 238/385 (61.82%), Query Frame = 1


		  
Query: 1   MSSGGTSGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVE 60
           MSS G   G  G +T    + P   +FCY+CNRTV+++ S PS + +CP CN GFLEE +
Sbjct: 1   MSSDGNVTGGGGANTVGVTNKP---FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYD 60

Query: 61  NPNP-----FPSPSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIF 120
           NPNP     F +P+P +  F     + +D  A   P LFP SSS  +SS    ID ++  
Sbjct: 61  NPNPNQGSGFLNPNPNSIPFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSAS-IDPNNPS 120

Query: 121 SGGVVGGGGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRV 180
             G    G G+   PF     F+PF F+Q++L  +R+ GA I+FVI+N   DQG    R+
Sbjct: 121 LSGPTRSGRGD---PF----AFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQG---FRL 180

Query: 181 PSNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAV 240
           P+N+GDYF GPGLEQLIQQLAENDPNRYGTPPA+KS++E LP V +T+  L+S+ +QCAV
Sbjct: 181 PANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAV 240

Query: 241 CMDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENL 300
           CMD+FE G EAKQMPCKH +H DC+ PWLELHNSCPVCR+ELPTDDP+YE+  RVR    
Sbjct: 241 CMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYER--RVRGAQG 300

Query: 301 GSGGNVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVG-SAAEGSNSSG 360
            SGGN  D  SG   +GD           +RTVER FRIS PW F A G   A G N+  
Sbjct: 301 TSGGNDGD-NSGQRSDGD-----------NRTVERSFRISLPWPFQARGPGPAPGDNA-- 338

Query: 361 DRSDSNPRRRENPDFGPETRTEDLD 380
                            ETR EDLD
Sbjct: 361 -----------------ETRQEDLD 338

[Close]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.700e-80
Identity = 175/377 (46.42%), Postives = 228/377 (60.48%), Query Frame = 1


		  
Query: 7   SGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENPNPFP 66
           S GV+   +  +     + +FCY+CN+TV+IS SS +D   CP CN GFLEE E+PNP  
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPF-CPICNQGFLEEYEDPNPNQ 61

Query: 67  SPSPLAQFFSPPTSSA----ADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGG 126
           S +     F+P +S +    AD  +   P +F  S++A S      +D  S+F   +   
Sbjct: 62  SLN-----FNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSG-----MDFMSLFGPSMQPQ 121

Query: 127 GGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLGDY 186
               Q++P   +D F+PF FLQ++LQT+R+ G + +FVIEN   D G    R+P N GDY
Sbjct: 122 ARSTQQNP--QSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGN---RMPGNFGDY 181

Query: 187 FFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFEL 246
           FFGPGLEQLIQQLAENDPNRYGTPPA+KS+++ LP+VKVT+++L S+ +QCAVCMDEFE 
Sbjct: 182 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 241

Query: 247 GAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGGNVN 306
           G++ KQMPCKH FH DC+ PWLELHNSCPVCR+ELPTDDP+YE RS+             
Sbjct: 242 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQ------------- 301

Query: 307 DGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDSNPR 366
               G+ G+GD    S EG Q       RF I  PW F     +  GS + G    +   
Sbjct: 302 ----GSQGSGDGQG-SVEGQQTP-----RFSIQLPWPFRRQDGSGSGSGAPGTGGGN--- 328

Query: 367 RRENPDFGPETRTEDLD 380
                    ETR EDLD
Sbjct: 362 --------LETRGEDLD 328

[Close]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.800e-34
Identity = 114/345 (33.04%), Postives = 155/345 (44.93%), Query Frame = 1


		  
Query: 26  YFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENPNPFPSPSPLAQFFSPPTSSAADQ 85
           ++C+ C R V +    P     C  C GGF+EE++        SP   F S       DQ
Sbjct: 8   HWCHRCQRAVRLHGQEPV----CFYCGGGFVEELD----MAQASPFDMFRSHRGVVERDQ 67

Query: 86  ----LAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGGGGGNQRSPFQDTDVFNPFQ 145
               +  F+ F+  + +  +    I    +SS           G +  P        P  
Sbjct: 68  TFDLMDAFSVFMRNRLAERSHDREIRGRTISS-----------GPENFPG-----LAPLL 127

Query: 146 FLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLGDYFFGPGLEQLIQQLAENDPN 205
                +     G   ++ +    SP  G G  R   N GDYFFGPGLE+L +QL+     
Sbjct: 128 IFGGQVPYRLTGDNAVEALFNGGSP--GIGITR--GNTGDYFFGPGLEELFEQLSAGTTR 187

Query: 206 RYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFELGAEAKQMPCKHFFHSDCIF 265
           R G PPA +S+++ LP++K+ +  L S  S C VC DEFELG+EAKQMPC H +HSDCI 
Sbjct: 188 R-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIV 247

Query: 266 PWLELHNSCPVCRYELPT-DDPEYEQRSRVRRENLGSGGNVNDGGSGNDGNGDDMDVSEE 325
           PWL  HNSCPVCR ELP+   P   Q       N  S  + +   S  +GN         
Sbjct: 248 PWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN--------- 306

Query: 326 GSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSG-----DRSDSN 361
                   ERR   S  W F + GS++  + + G     D SD N
Sbjct: 308 --------ERRNPFSSFWPFRSSGSSSSSTQNRGGTRNSDTSDEN 306

[Close]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.700e-32
Identity = 89/279 (31.90%), Postives = 142/279 (50.90%), Query Frame = 1


		  
Query: 14  STTTSFSYPPQHYFCYECNRTVSISPSSPSDE-LSCPNCNGGFLEEVENPN-----PFPS 73
           +TTT+ +     Y+CY C R +S+     ++  + CP CNGGF+EE+E+ +       P+
Sbjct: 19  TTTTTTTTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPA 78

Query: 74  PSPLAQFFSPPTSSAADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGGGGGNQ 133
            +P  +       S   +          +S+   S +P+       +  GG  GGGG  +
Sbjct: 79  STPEVRSVEETHRSIIRRR---------RSNRRTSFNPV------IVLHGG--GGGGAGE 138

Query: 134 RSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIR-VPSNLGDYFFGP 193
           R   ++ D                 G    +   E    D  G  +R +P ++ +   G 
Sbjct: 139 RVENEEGD-----------------GATRERRAYEFYYDDGSGSGLRPLPDSVSEILMGS 198

Query: 194 GLEQLIQQLAE-----NDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFE 253
           G E+L++QL++     N   R G PPA+KS++E LP V++++    ++++ CAVC + FE
Sbjct: 199 GFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFE 258

Query: 254 LGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTD 281
            G E ++MPCKH FH DCI PWL + NSCPVCR+ELP+D
Sbjct: 259 AGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.300e-30
Identity = 84/278 (30.22%), Postives = 143/278 (51.44%), Query Frame = 1


		  
Query: 13  PSTTTSFSYPPQHYFCYECNRTVSI---SPSSPSDELSCPNCNGGFLEEVENPNPFPSPS 72
           P+T T+ +     Y+CY C R VS+     ++    ++CP+C+GGF+E++ +        
Sbjct: 5   PTTPTTTTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQIND-------- 64

Query: 73  PLAQFFSPPTSSAADQLA-PFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGGGGGNQR 132
                    +SSAA +L  P +  +   +++  S            F+  +V  GG  +R
Sbjct: 65  ---------SSSAATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGER 124

Query: 133 SPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIR-VPSNLGDYFFGPG 192
              ++ D     +  + Y                    D  G  +R +P ++ +   G G
Sbjct: 125 EEGEEGDAARDRRAFEFYYD------------------DGSGSGLRPLPDSVSEILMGSG 184

Query: 193 LEQLIQQLAENDPN-----RYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFEL 252
            E+L++QL++ + +     R G PPA+KS++E LP V++++  + S+++ CAVC + FE 
Sbjct: 185 FERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEAN-CAVCTEIFET 244

Query: 253 GAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTD 281
             EA++MPCKH FH DCI PWL + NSCPVCR+ELP++
Sbjct: 245 ETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 300.4 bits (768), Expect = 1.500e-81
Identity = 175/377 (46.42%), Postives = 228/377 (60.48%), Query Frame = 1


		  
Query: 7   SGGVDGPSTTTSFSYPPQHYFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENPNPFP 66
           S GV+   +  +     + +FCY+CN+TV+IS SS +D   CP CN GFLEE E+PNP  
Sbjct: 2   SSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPF-CPICNQGFLEEYEDPNPNQ 61

Query: 67  SPSPLAQFFSPPTSSA----ADQLAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGG 126
           S +     F+P +S +    AD  +   P +F  S++A S      +D  S+F   +   
Sbjct: 62  SLN-----FNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSG-----MDFMSLFGPSMQPQ 121

Query: 127 GGGNQRSPFQDTDVFNPFQFLQSYLQTMRAGGANIQFVIENTSPDQGGGNIRVPSNLGDY 186
               Q++P   +D F+PF FLQ++LQT+R+ G + +FVIEN   D G    R+P N GDY
Sbjct: 122 ARSTQQNP--QSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGN---RMPGNFGDY 181

Query: 187 FFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFEL 246
           FFGPGLEQLIQQLAENDPNRYGTPPA+KS+++ LP+VKVT+++L S+ +QCAVCMDEFE 
Sbjct: 182 FFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFED 241

Query: 247 GAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGSGGNVN 306
           G++ KQMPCKH FH DC+ PWLELHNSCPVCR+ELPTDDP+YE RS+             
Sbjct: 242 GSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQ------------- 301

Query: 307 DGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEGSNSSGDRSDSNPR 366
               G+ G+GD    S EG Q       RF I  PW F     +  GS + G    +   
Sbjct: 302 ----GSQGSGDGQG-SVEGQQTP-----RFSIQLPWPFRRQDGSGSGSGAPGTGGGN--- 328

Query: 367 RRENPDFGPETRTEDLD 380
                    ETR EDLD
Sbjct: 362 --------LETRGEDLD 328

[Close]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Match: AT1G55530.1 (RING/U-box superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 5.300e-42
Identity = 87/184 (47.28%), Postives = 115/184 (62.50%), Query Frame = 1


		  
Query: 178 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCM 237
           +LGDYF GPG E L+Q+LAENDPNRYGTPPA K +VE L +VK+ E L      QC+VC+
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 238 DEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLGS 297
           D+FE+G EAK MPC H FHSDC+ PWLELH+SCPVCRY+LP D+ + +  +     N  S
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 298 GGN--VNDGGSGNDGNGDDMDVSEEGSQNDRTVERR--FRISFPWSFGAVGSAAEGSNSS 357
             +   + G   +DGN    +  EE  + +   E       S PW F  + S+++ SN+ 
Sbjct: 294 SASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTLFSSSQDSNAP 351

[Close]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Match: AT5G56340.1 (RING/U-box superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 1.500e-41
Identity = 98/190 (51.58%), Postives = 118/190 (62.11%), Query Frame = 1


		  
Query: 177 SNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVC 236
           ++LGDYF GPGL+ L+Q LAENDPNR GTPPA K +VE LP+VK+ E L      QC+VC
Sbjct: 209 TSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVC 268

Query: 237 MDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPT---DDPEYEQRS----R 296
           +D+FE G EAK+MPCKH FH  CI PWLELH+SCPVCR+ELP+   DD E +  S    R
Sbjct: 269 LDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLR 328

Query: 297 VRRENLGSGGNVNDGGSGNDGNGDDMDVSEEGSQNDRTVERRFRISFPWSFGAVGSAAEG 356
            R     S GNV +    N GN D     E  S N R      R SFPW F  + S++  
Sbjct: 329 TRNVRETSNGNVVE----NVGNADRGREDEVRSGNGR------RFSFPWPFSGLFSSSSS 382

Query: 357 SNSSGDRSDS 360
           S+SS   S S
Sbjct: 389 SSSSTSGSQS 382

[Close]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.300e-37
Identity = 98/276 (35.51%), Postives = 136/276 (49.28%), Query Frame = 1


		  
Query: 26  YFCYECNRTVSISPSSPSDELSCPNCNGGFLEEVENPNPFPSPSPLAQFFSPPTSSAADQ 85
           ++C+ C R V +     + +  C  C GGF+EE++         P             D 
Sbjct: 8   HWCHRCQRAVWLR----ARDAVCSYCGGGFVEEIDI-------GPSRAHRDVERDPTFDL 67

Query: 86  LAPFAPFLFPQSSSAASSSPIEPIDLSSIFSGGVVGGGGGNQRSPFQDTDVFN---PFQF 145
           +  F+ F+  + +  +    I           G +G  G    S      +F    PF+ 
Sbjct: 68  MEAFSAFMRSRLAERSYDREIS----------GRLGSAGSESFSNLAPLLIFGGQAPFRL 127

Query: 146 LQSYLQTMRAGGAN--IQFVIENTSPDQGGGNIRVPSNLGDYFFGPGLEQLIQQLAENDP 205
                    AGG N  ++  +   +P  G   I   +N GDYFFGPGLE+LI+QL+    
Sbjct: 128 ---------AGGDNSSVEAFVNGAAPGIG---IARGTNAGDYFFGPGLEELIEQLSSGTH 187

Query: 206 NRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQCAVCMDEFELGAEAKQMPCKHFFHSDCI 265
           +R G PPA KSS++ LP++K+T++ L S  S C VC DEFEL +EAKQMPC H +HSDCI
Sbjct: 188 HR-GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCI 247

Query: 266 FPWLELHNSCPVCRYELPTDDPEYEQRSRVRRENLG 297
            PWL  HNSCPVCR ELP+       +S   R   G
Sbjct: 248 VPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTNG 249

[Close]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Match: AT3G13430.1 (RING/U-box superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 5.100e-37
Identity = 76/142 (53.52%), Postives = 99/142 (69.72%), Query Frame = 1


		  
Query: 175 VPS-NLGDYFFGPGLEQLIQQLAEND-PNRYGTPPAAKSSVEGLPSVKVTEELLSSDSSQ 234
           VPS +LGDYF GPG E L+Q+LAEND  NRYGTPPA K +VE L  VK+ + LL     Q
Sbjct: 170 VPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----Q 229

Query: 235 CAVCMDEFELGAEAKQMPCKHFFHSDCIFPWLELHNSCPVCRYELPTDDPEYEQRSRVRR 294
           C+VC+D+FE+G EAK+MPCKH FHSDC+ PWLELH+SCPVCRY LPT D +  +      
Sbjct: 230 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDEPKTDAETS 289

Query: 295 ENLGSGGNVNDGGSGNDGNGDD 315
            N  +  ++++    ++G+  D
Sbjct: 290 RNDDNNEDISNASMASNGSSPD 306

The following BLAST results are available for this feature:

BLAST of Spo12249.1 vs. NCBI nr
BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
BLAST of Spo12249.1 vs. TAIR (Arabidopsis)

BLAST of Spo12249.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230530\|gb\|KNA21890.1\|	2.0e-216	99.7	hypothetical protein SOVF_0391...	[more]
gi\|731351871\|ref\|XP_010687250.1\|	7.0e-153	76.3	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|658002068\|ref\|XP_008393509.1\|	2.8e-101	56.8	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|703069031\|ref\|XP_010088395.1\|	3.4e-99	55.8	E3 ubiquitin-protein ligase RI...	[more]
gi\|694330457\|ref\|XP_009355932.1\|	3.4e-99	55.7	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo12249.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RQS8_SPIOL	1.4e-216	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUY0_BETVU	4.9e-153	76.3	Uncharacterized protein OS=Bet...	[more]
W9T1E8_9ROSA	2.4e-99	55.8	E3 ubiquitin-protein ligase RI...	[more]
A5C2A6_VITVI	3.2e-96	54.5	Putative uncharacterized prote...	[more]
F6HVS8_VITVI	6.0e-95	53.9	Putative uncharacterized prote...	[more]

BLAST of Spo12249.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RING1_GOSHI	1.3e-85	49.6	E3 ubiquitin-protein ligase RI...	[more]
RNG1L_ARATH	2.7e-80	46.4	E3 ubiquitin-protein ligase RI...	[more]
RHC1A_ARATH	3.8e-34	33.0	Probable E3 ubiquitin-protein ...	[more]
RDUF1_ARATH	4.7e-32	31.9	E3 ubiquitin-protein ligase RD...	[more]
RDUF2_ARATH	3.3e-30	30.2	E3 ubiquitin-protein ligase RD...	[more]

BLAST of Spo12249.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G19950.1	1.5e-81	46.4	RING/U-box superfamily protein	[more]
AT1G55530.1	5.3e-42	47.2	RING/U-box superfamily protein	[more]
AT5G56340.1	1.5e-41	51.5	RING/U-box superfamily protein	[more]
AT3G56580.2	2.3e-37	35.5	RING/U-box superfamily protein	[more]
AT3G13430.1	5.1e-37	53.5	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 232..274 score: 3.4
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 233..273 score: 9.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 233..274 score: 12
IPR006591	RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4	GENE3D	2.20.28.30		coord: 25..51 score: 5.
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 229..277 score: 6.7
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 101..376 score: 2.5E-111coord: 23..79 score: 2.5E
None	No IPR available	PANTHER	PTHR22763:SF28	SUBFAMILY NOT NAMED	coord: 101..376 score: 2.5E-111coord: 23..79 score: 2.5E
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 24..58 score: 9.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 216..280 score: 6.86

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding