Spo12060.1 (mRNA) | SpinachBase

Overview


Name	Spo12060.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein
Location	chr4 : 8890442 .. 8899543 (-)
Sequence length	2355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGCATGTTCTCCAATCAAGTCTATGTCGAGGTTTCCAGAATGAAAGTCCTTGCAAATTAATCAAACAGAGAAAACAGCACTGCAAATTAGGCTAAAACCCACTTTCAATTTCAACCCTTTTTCGTGTTCATCTTCTTCGTCTCGAACAACAATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGTAAGCGCTTAATCTCCCCCTTAATTTTTATCTCCTGTTTCCTTTAATTGAAGCTATAATATCTGATTTATTGATTTTATACCCTATAATCTGTTAAAAAATTGATTCTTGATTCGTTTGAAGCTATGTTCAGTGACAATCTATGATTCTTTTTTGCCCTTTTGAGTTAATAATCCGATGAATTGCATGCTTATACCTTTATTAGATTGCACTTGTTTTAATTTGAGAAATGGGTTTTGTTCCTTGATTGTATTGAACCCTAAAGTTGAATGATTTAGGTTAAGTTCAGTTCATTATGCTGGAGATATTGTAACTTATTATACTATTTGGGGATGTTTGAAAAGCCTTGGATATGTGATTGAAAGTTAGAAATTTCCTACTTAGGTTGAACAATAGAGAGTGTGGGGATGTTCATATTTTGAAAGCATGTCATGCCCTTCATTGTGAGATGTGGCAATTATTTCTGAATGGAGGGAGTTTAGATTCTTTTACTTCTTAGGGTATGGTTGAACATGAGGTGTGAACGGGCATTGCTTTCAAGGTTTCCGGTTGCTAGGGTTTTAAACTTTTAATGTAGCTGGGAAACCCATTCTTTTGTTCGAAACATTTGTGTGTGAAAACGCTTCAGAGTAAACGGGCATTGCTTCCAAGGTTTCCGGTTGCTAGGGTTTTAATGTAGTTGGGAAACCCATGCGTTTGTTTGAAACGTTTGTGTTTCGTCGAGGAAGTCGTACTTTATTTTCACATATATGTGGTTTTTAATTGTCATTGCTTGTTATAGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGGTGAGTTTTACCTTACCAAGTAATGTAGTTCTGTGTGAATGAGGCATTGGTTTTATGTTTTGTACTTCTGTGTGTATAAGGCCTTGCTTGGGTGTTTAGGATTGAGTGATTGACATGTGTGATACATGCATCGATTCATGTTGTGTTTCTCCAGAATGTTGCATTTGAAAAACTAAATTTTGCCTGTTTTTGTAAGTAATAACTAATAACCTAGTAGTCAAAGTGCAAACAGAGTAGTTGAATGTTCTTTGAAGTTTGAACTGTTGATATGGTGCTACCAGCAAATCTTATTAACTTAATTTAGGACATTTCCTCTCAATGGAAGAGGAAATATCAGCAAAGAAGATTGGAAATTCTGGAGAAATATTGAGTGAGGAAATGACTTGGGAAATAAGAAAGTTTTAGGCTGCCATGGTGAAATGTATATACAATTGATTTACATTCACCTATCTGGCTATGCTTTAAATAACAGATTTTCCCTCGAGGATTTTCCTTTTGAAATTTATTAGTTCCTTTTGTCTCTTTCAATTACAGTTCTACCAGTTACCAATTGCACGGTTACACGATCTGTATCATGTTGAAACAACTTCTTAGCTTGTTTACTTCGCCTGAGCAGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGGTCAGGAACTTCATTCTTATTATCATTCAGGAACCTTATTCTTATTATCATTCAGGACATTGGCGGATCTAGAAATTGTACTAAGTGGGGTCACTACTCACTATTACAAAATTACTGAAAAATTAAGTACTTCTTAATACGAATTAATCAAAAACTAACTAAAATTATGCAAATTTTTTCGGCCAAGTGGGGTCACTTATACATGGGATCCGTCAATGATTCAGGAGAGACGATTCTTATACATAGTGATTTTCTTGCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGTTGGTGCTTTAGTATTATGGCTTTCAGATTATTATATGACCTATGCTACAAATTCATTACTCTTGTTATTATTTTAATGGGACTATCCCTTCTTTTGTAGGTTATTTACCTTTTTTTTTTAAAGAATTATATCCGTCTAGAAAGGAGCTACCTATTTCCCTTCCTGTCATTGCTAATCCAGTAAGCTTGCTTCTTAAAAGAGAGAGATATGCTTTGTCCTTTTGCACTTTTGCTAATAAAAGCATTTTGAATGAATCATTCAGTTTGATGTTGGCATGGTTTCCCTTTCCCTTATGGTCCGGAGTTTGAAATTGGTATACCAATGCAGTAGGCAAAGAGATTACCTTGGAAGCCACAGCTATTATCAAAATTTCTGGTCTAGCATTTATTTTGGTGTTTCCTTTGGACTTGTGCAGTAAATTGTGTTTCAGTTTTACAGTGATTTATTGAAAATATTTACAGTCAAAACCGCGGAATATATGAAACAGTCGTTAATTGATTGTTTTCTGGCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGTAATGCATATGCTTTTAGTTGTCTCTAATATTCTTTCACATAAGTAGCTTGCTACTATTTTCATTGTAGTGTTTAACATCACTTGTAGTTGCCGTAGCACCCATGTTATATTGAAAGAGTGGTTTTTGTGTGTGTCAGGATGGGAGAAGGGCCGAAGGGGTGGGATTAAAGGTAGTAGGCACGGTATTACCAACAATTCACGCCCTGTTGCATAAAAACACATTCTTATTTTTCACATCCTTGGTTAACCTTGTGTGCAGATAAAGGGCATACGTAGTTACTTATGCGTGTTTCTTCTGTACTGTCTTTCTTAGATGCCTTTGAGTTTTGTTACTGCCTTACTGGAATTGGTTGTAGAAGATGAATCAGTGTAGAGTCAGTTTTGTCCTCATCTTTTACAATATACTTTAACAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGAGTCCTGATTACCTCCTAATAAGCATATTTAATGAATTATCCGCAAAGATTTTTTTTGTCTTAAAGCTAGCATAGGATGTATATAGTTTGTACTTGTATTTGCCTCTGCTATGTTATATTTAACATATTTGGTAATCCTATACAGGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGTAAGGACTAAGGATAAAGCTTCTATAATTCTATTCTTTTATGCGTAAAGTTAAATATGCTTTTATAGGAAATGGCACACGTACGTGAACATCCGTACAATTCCTATTGAAAGTATATTAGTTTAATTTGTTTTAGGTAGGTGGGCTGGGAAATCGAAAGTGTGGCTCTCTTTTGTATGTGTTTTTATTTTCTTAGAAATGTGTTCGATCGCTTGATAAGAAATGGCATATATAGTGTTTTCTCTTTAAGCTTTACCAACATCACCTAGACAAAGTGTCTATCTTTTTTTCTTCCTTTTTCTAATGGACTAAATTAAAATGTCTCATTTAGTTTTGCAACTGTGACGTAGCTGAAATTTGTGGCTTTTGGGATCAGGGGTCTAATTAAACAACCTCTGTATTAGTAGGGTGAATGCTGCAACCTTCATGCTGGATCCAGTCCACTTGGCTTACACTGTGGGGACCCCTTCAAAGGCATTGGTTTAATGTTGACGTCGATGTTGTAGGGAAAAATCTTTAAAACAAAATTGATGAACATGTAAAGAAGGCCATACTCTATGTGTACAAAATTTCAGGCACTTCAGCCTCTCCATAAGACTCTACTCCTCCTGCTTGTTGTAGGAATTAGAACTCCACTGAATTATTACGTGACTGATATTTGAGCATGCCACCTCCTGACACCTGGGACTTTTCTTTCTAGTCTGTGATATGCATAGAATTACTAGAAGCCGCTGATCTAATTTTAAACGTAGCCCTATGCTTCCTTTTGATTTTATAGAGAAGGCAAACAAAAGTCCACGACCAACATGCATCACACATTCACACTTATGAAAACCTAAATCTATAATTTTAATGCTTATTGATGTTTTCTGTAGTCATAGAGATTGGTCTTAGCTTATTTCAACTAATTCTTCATACTGGAATTGACTGCATATTCAACTCTTGGAGATGTTTAGATATTTCTCTGCTTGTGTGAGAGTTAGAAATTTGGTTTTGTGGCTCACTATGTTGACAACTTCAATTTTGATTTTGTTATGGAATTCTCTCTAACTGCATACCACAATCCCATTGTTGACTTTATTTATCCACAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGTATTTTCTATATTTGGCTGGATACTAAAATCAATGTGCAATAGAACTATTATTAGTATCTCAAGATTTCAATTTTTTTTTTCCAACTTATACCAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGTAAATATGCGCATTAATACTCTGTTTTCAGATATAGAGGCTCATTGTTTGATTAATTCTTAATATTCAATGCCCTCATGGTAGTGCCTGGTCCTAAGTTGCGAAATATGATAGCTTGAGGCTCACATGTTCTTGATGTGTTTTTATACTCTTTTTTCCAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTATTATTCTTGTCCTTTCTCATCCTTTTTTGAGTTTCACTATTGATGTTGCGGGATTCGGAAAGCATCTTTAACCTTATGCGCTTCTATAAAGATGACTAATTGTTGATGTTTAGAGCTGAATTATGCTCTTGTTTTGACATAACTATCTTCAGTATTGGTTGGTTTCCTGGAATTGCCCCATTGCTTTTTTGCGATAGTTAGCTGAAAAGTCCAAGTCTCATTCTTTTCTCCTCCTTTAATCAATTTTTTGATTATTATATTGGAAAATGTACTGTCCTGTCAACTGTTGCACTCATATAACGTATAATTGCATGTATTTTTGATTTTCTTAGTCACATTTTCTTCTCATTGCTGCTACTTTTGGTGACGTCGTTAGTTCGTTACTGCTCTTATATGCGAACTATCATTTGAATTTAACGAGGAAACTTATGCATATGATGGCATTTAATTTTCTTATAGCTAGGCTTTCCTTAGATTCAATACTCATCCCGGACCTTTCTTTTTGAGCATTGTTTTGCTGCTTCATTTTGCATAAATCTTGCAATATTGTTGGAATGGAAGTATGGCACATGCTTTCCAACATGAACTTTTCAATCATATTGCCACGTCATATATATTTGGGCTTACCAACATGTTGCCTTGTTTTTAGGACCTTAAGCCACTTTCAGGCGTATACTTTGGCCAACTTTGTATTCTTGTATGCTTTAAAGAACAAAAGGACAAGCAGTCAAGCACCCACTTTTTCTCTCAATTTCCAAAATCTCAAACCTGAATAATCGCAATTTTTAAACCTATATAAAGCAGTACAAATACAACATATCTTCCTGCCATGTGGAAGTTTGATTTTGGATTTGTGATAGTATAATTAGTTCAAAAGCATAATTAGTTCCTGCGATGTAGAAGTTTGATTTTGGATTTGTGATTGTATTTGTTATATCTTCCTTTACATGTTAACCTTACCATCTTATTCATTGTTAGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGTAAGTGTAAAATAAATTTCATAATTCTGCGTCTCATCTCCAAGGTCCCGAAAGAACATGTTTTAAAGCAGTAGTGTAAAAAAAGTACAGGATTGAACAACTCATGCCTTAACAAGCCCATTGATTGTTGCAATCATTTGTCTTTTTTGAAAGAAAGAGATAGTGAACAGAATGTTTGCGCGAGTGGGCATATTTTTTTTTGTTTTTGTAAATTAAGAAACAATTTTCTGTGAACTTCTCTCATCTCCATTGGACGTTTTTCAGAGTAGACTGCAAAATCCTTCATGCCCAGTTTTGATTTGTTGAATGATATTGTTGTTGCTACTTCTACAGGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTAAGTGGCTTTTTTTAACTCGTTTGGAACCGAGAAGACGTACTTCGGTACTTGTATATCCTTTAAGAAGAGTTGGAATGTACTTACAGTTAAAGGAATCATTAAACATAAGCTATTCATCTTATTAATCTCATACATTTTAAGAAGTTCCTCCGAGTTGATGGTTGCATGTATTAGGAGATGACTCGAATAGTTCCAAATTTATTTCTGGTTTTACAAATTACTTCCTCCTTTTCTCAATAGATACACATTTTTACCTTTTAAACTATTATTTTTTACGAACATTGACCACATTTAGTTACACTCCGTAACATGTTAAAAAAAAGAATTCACTACTCTAGTTTGTTGTTCGGCTTATCTCAATGTACATTTTCAATATATGATTCAAAATAAGTTTTTATATAATGGTCAAAGTTGTGCGTTTCTATGAGCGTCTAATCATAATACAAGTAATAATAATAATGATAGTCCTAGTAGTAAACTAATAATAGTAAAGGAGAAAACAACTATCTTGGTGGCTGTCCTCACATTATCCCTAAAATAAAAATAATATTCCATCTGCTTCGGATTTTGTTTTGTTTTTGTTTCTGATTTCCTTTCATTGGGCAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTAAGTACAAAAGTTTATTGTTTTTGAACGAAATAGTGCGTAGCATAACCTATACGGTTTTGTAGCAAAGCTTGTTTCTTGCTCAATTGTAGGTTAGTCTATGTTTCTTTCATATGGCTGCAGTCGGCATCCATGTGTTTTAAGTTTTTAACACATATTGCATGATCTCATCTACATGATCTCATTGATACTCCCTCTGTCCCTAAATATTTTGGTAAAACTATAAAAGTTTGACCATGAAATCTCACTAATTTATAACAAATAATGTAGTCGTGTCACGTGGGATCTTGTTAGACTCGGTTCAATATATATTTTTAGAATATCAACTTTTTACAATTTTTACGCTTAATAGAATTGGAAATATTTACGTTTTAAATCGCGTTTTGGAGACCTTGTAAAGTCAAATGGGGCAAATATTTAGGTGTGGAGGGAGTAATAATTTAGCAATAGAATTAAAAATCAAATATTATTTAGTAGAAAAGTGACGTGATGAATATTTCAAGATAAATGCCATAGGACAACCTGGATTTGTGAAGAATCAAGATCATCATTTAGCAAATACTTGCATCAATTTTGGGAAGCCTTAATTTTTCCGTCTACCTGATTAATGATAATCTGCACACATAAGCTGTATAATTCAGTTGGAATTGTGCTGCACAAACAACTTTTTGATGTACATGTCAGAACTTACTTACTCCCTATCAGAATTCATTTCTCACAATTTTTTCCCGCTTTTGTGAAGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGAGCCAAATAATATGATTTATGACCAACTTGTTTAGAGAAGGATGCGAAAATCTGCAATTACAAATCTAGACTTCTAGTTAATGTAATTAGTTTGTCATGAAAATTTGTAACCACTGGATAGGATTTGAAGTGCTATGGAAATGGTAGCTTAGATGTACATACTGGAAGGAAGTTGAAATTTTTGTACTTTTGGCTAGATTAATACCTTGACAGTTGACCTAAGATATATTCATATGCAGATTTCCCAATAATGTTAACATCTGACAAGATTTGTATAACAAAGTATGTAGAGTGTGCTCATTCAGTCATTCCTCTTTAGTTCCCCGAGCTGAGGCAGATTTCCTTGTAGCCTGTAACCAGGACCAAACCAGCTACTGCTGTTTTCCTCTGCATTTGAACAACAACAACAACAACAAAGCTTTAGTCCCAAAATGATTTGGGGTCGGCTAAAATCGTCATAGGAGATCGTCAATGTGACCAGAACAAACCAGAAATGATGGTTTTATTTATGAGGTAACACATAGTTGCTTGTGGCATACTCCATCTTAAACTCAAGGATATAGCTTGGTTTGATGTATTTTTTTCGGGGTTTTCTTTGTTTTATTCACTTTCCGTTTTGAAATCTTGGCATTGTGCCATCGTGGTTGGGGAATTGACAATAAGGGATTAAGGGCTGACAAATCG

mRNA sequence

CATTGCATGTTCTCCAATCAAGTCTATGTCGAGGTTTCCAGAATGAAAGTCCTTGCAAATTAATCAAACAGAGAAAACAGCACTGCAAATTAGGCTAAAACCCACTTTCAATTTCAACCCTTTTTCGTGTTCATCTTCTTCGTCTCGAACAACAATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGAGCCAAATAATATGATTTATGACCAACTTGTTTAGAGAAGGATGCGAAAATCTGCAATTACAAATCTAGACTTCTAGTTAATGTAATTAGTTTGTCATGAAAATTTGTAACCACTGGATAGGATTTGAAGTGCTATGGAAATGGTAGCTTAGATGTACATACTGGAAGGAAGTTGAAATTTTTGTACTTTTGGCTAGATTAATACCTTGACAGTTGACCTAAGATATATTCATATGCAGATTTCCCAATAATGTTAACATCTGACAAGATTTGTATAACAAAGTATGTAGAGTGTGCTCATTCAGTCATTCCTCTTTAGTTCCCCGAGCTGAGGCAGATTTCCTTGTAGCCTGTAACCAGGACCAAACCAGCTACTGCTGTTTTCCTCTGCATTTGAACAACAACAACAACAACAAAGCTTTAGTCCCAAAATGATTTGGGGTCGGCTAAAATCGTCATAGGAGATCGTCAATGTGACCAGAACAAACCAGAAATGATGGTTTTATTTATGAGGTAACACATAGTTGCTTGTGGCATACTCCATCTTAAACTCAAGGATATAGCTTGGTTTGATGTATTTTTTTCGGGGTTTTCTTTGTTTTATTCACTTTCCGTTTTGAAATCTTGGCATTGTGCCATCGTGGTTGGGGAATTGACAATAAGGGATTAAGGGCTGACAAATCG

Coding sequence (CDS)

ATGTCGTCGGTTGAAAATCCGAGCTTACAGCAACCCCCACAATCTCCAACACACGAACAACTTCTCGTTGGGACAGCTGGGCCAACGAGTCAACATTTACCAGAAAATTCTCTAGTGGGATGGTATATAATCGATCCAACCCAGCAGCAGATTGGCCCGTACACAATTGCTGAATTGAAGGAGCATTTCCTAAACGGATACCTGACAGAGAGTACCTTTGTATGGGCTCAAGGAAGACCTGATTGGCAGCCTCTTTCATCTGTTCCCGAGTTGATGACTGGCGTACACTGTCATGCAACTGAACTTTCAGCTTCAGTACCTGCTATCAAAGATGAAGAGTTCGAGAAATGGCAAAAGGAAGTGAAAGAGGCTGAGGCTGAAGCTGAAGCTGCGATGCTAAATAATGGTTCTGCTTCAGGTGATGTAGATGGAGTTGAGCAAGAGAGACCCTCAACTCCACCTGACGGGGAGGAAGAATTTACCGATGATGATGGAACTACTTACAAGTGGGATCGCAGTCTTAGAGCATGGGTTCCTCAGGAGAACCAAGCAGATGAAGAAGAGGGATACAGATTGGAAGAGATGACATTTGTCGAACAAGAGGAAGTTTTTCCTGTACTAACTGTAGATGACACTCTTGCAAATAAAGAAGACACTACTGATGCTGGGGCAGTAGAAGAAAAGGATACAAAACAACGTGCGAAGAGAAAAGAGCCAGAACCAAAGACTGAGAAAAAGGAAGCAAATAAACCGCCAGACAGTTGGTTCGAGTTGAAGCAGAACACGCATGTTTATGTGACTGGATTGCCAGATGATGTTACAATCGAGGAAGTGGTGGAGGTTTTCTCCAAGTGTGGCATAATAAAGGAGGATCCTGAGAGTAAAAAGCCCCGTGTGAAACTATACTTCGACAAGGAGACTGGAAGAAAGAAGGGGGATGCACTTGTTACATATCTAAAGGAGCCATCAGTAGCCTTGGCGACACAACTATTAGATGGGGCATCTTTCCGGCCTGGAGAGAAGATAACTATGTCTGTAACCCCTGCGAAGTTTGAGCAGAAAGGGGAGAGATTTATTCCCAAACAGACGGATAAAAAGAAGAAAAACAAACTAAAAAGGGTTGAAGAGAAGATGCTTGGTTGGGGTGGTCGTGATGATTCAAAACTTATGATCCCGGCTACGGTTATCCTGAGCAACATGTTTACAACTGCGGAAATGAGAGAAGAGTTAAGTTTACGTGATGAATTGGAGGTAGATGTCCGTGAGGAATGTGGAAAGCTTGGTCCAGTGGATTTCATCAAGGTCTGTGAGAACAACCCGCACGGAGTTGTGCTAGTCAGGTACAAGGACAGAACCGATGCTAAAAAGTGTATAGACTTGATGGATGGAAGGTGGTTTGGTGGGAGGCAGATACACGCTGTTGAAGATGACGGTTCTGTCAATCATGCTGCGCTCCGGGACTATGATGATGAAGGAGAACGACTCAAGAAATTTGCTGCAGAACTTGAAGCTGAATGA

Protein sequence

MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12060	Spo12060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12060.1	Spo12060.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12060.1.utr5p.1	Spo12060.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12060.1.CDS.14	Spo12060.1.CDS.14	CDS
Spo12060.1.CDS.13	Spo12060.1.CDS.13	CDS
Spo12060.1.CDS.12	Spo12060.1.CDS.12	CDS
Spo12060.1.CDS.11	Spo12060.1.CDS.11	CDS
Spo12060.1.CDS.10	Spo12060.1.CDS.10	CDS
Spo12060.1.CDS.9	Spo12060.1.CDS.9	CDS
Spo12060.1.CDS.8	Spo12060.1.CDS.8	CDS
Spo12060.1.CDS.7	Spo12060.1.CDS.7	CDS
Spo12060.1.CDS.6	Spo12060.1.CDS.6	CDS
Spo12060.1.CDS.5	Spo12060.1.CDS.5	CDS
Spo12060.1.CDS.4	Spo12060.1.CDS.4	CDS
Spo12060.1.CDS.3	Spo12060.1.CDS.3	CDS
Spo12060.1.CDS.2	Spo12060.1.CDS.2	CDS
Spo12060.1.CDS.1	Spo12060.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12060.1.utr3p.1	Spo12060.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12060.1.exon.14	Spo12060.1.exon.14	exon
Spo12060.1.exon.13	Spo12060.1.exon.13	exon
Spo12060.1.exon.12	Spo12060.1.exon.12	exon
Spo12060.1.exon.11	Spo12060.1.exon.11	exon
Spo12060.1.exon.10	Spo12060.1.exon.10	exon
Spo12060.1.exon.9	Spo12060.1.exon.9	exon
Spo12060.1.exon.8	Spo12060.1.exon.8	exon
Spo12060.1.exon.7	Spo12060.1.exon.7	exon
Spo12060.1.exon.6	Spo12060.1.exon.6	exon
Spo12060.1.exon.5	Spo12060.1.exon.5	exon
Spo12060.1.exon.4	Spo12060.1.exon.4	exon
Spo12060.1.exon.3	Spo12060.1.exon.3	exon
Spo12060.1.exon.2	Spo12060.1.exon.2	exon
Spo12060.1.exon.1	Spo12060.1.exon.1	exon

Homology

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|902208543|gb|KNA15975.1| (hypothetical protein SOVF_093470 [Spinacia oleracea])

HSP 1 Score: 1001.9 bits (2589), Expect = 4.000e-289
Identity = 503/505 (99.60%), Postives = 504/505 (99.80%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK
Sbjct: 1   MSSDENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ
Sbjct: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE
Sbjct: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
           PKTEKKEANKPPDSWFELKQNTHVYVTGLP+DVTIEEVVEVFSKCGIIKEDPESKKPRVK
Sbjct: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPEDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV
Sbjct: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV
Sbjct: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHAALRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHAALRDYDDEGERLKKFAAELEAE 505

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326133|ref|XP_010673865.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 793.5 bits (2048), Expect = 2.200e-226
Identity = 406/505 (80.40%), Postives = 442/505 (87.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ++ SL Q   S   +Q   G  G  +QHLPEN+ +GWYI+D +QQQIGPYTI+EL+
Sbjct: 1   MSSADDSSLHQ---SSVDQQ---GAEGIINQHLPENAELGWYIVDASQQQIGPYTISELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVPQ
Sbjct: 121 VKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           E+QADEE GY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEPE
Sbjct: 181 ESQADEE-GYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
            KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRVK
Sbjct: 241 NKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+P
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFVP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD+
Sbjct: 361 KQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVDI 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           +EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGSV
Sbjct: 421 QEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHA LRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHALLRDYDDEGERLKKFAAELEAE 485

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326135|ref|XP_010673866.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 737.3 bits (1902), Expect = 1.800e-209
Identity = 374/446 (83.86%), Postives = 401/446 (89.91%), Query Frame = 1


		  
Query: 60  KEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQK 119
           +EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQK
Sbjct: 17  QEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQK 76

Query: 120 EVKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVP 179
           EVKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVP
Sbjct: 77  EVKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVP 136

Query: 180 QENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEP 239
           QE+QAD EEGY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEP
Sbjct: 137 QESQAD-EEGYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEP 196

Query: 240 EPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRV 299
           E KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRV
Sbjct: 197 ENKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRV 256

Query: 300 KLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFI 359
           KLYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+
Sbjct: 257 KLYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFV 316

Query: 360 PKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVD 419
           PKQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD
Sbjct: 317 PKQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVD 376

Query: 420 VREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGS 479
           ++EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGS
Sbjct: 377 IQEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGS 436

Query: 480 VNHAALRDYDDEGERLKKFAAELEAE 506
           VNHA LRDYDDEGERLKKFAAELEAE
Sbjct: 437 VNHALLRDYDDEGERLKKFAAELEAE 448

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|731326137|ref|XP_010673867.1| (PREDICTED: splicing factor U2AF-associated protein 2 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 667.9 bits (1722), Expect = 1.400e-188
Identity = 343/414 (82.85%), Postives = 369/414 (89.13%), Query Frame = 1


		  
Query: 92  MTGVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNNGSASGDVDGVEQERPS 151
           MTGVH  A+          D+EFEKWQKEVKEAEAEAE    +    SG+VDGV+ ERPS
Sbjct: 1   MTGVHFSASN---------DDEFEKWQKEVKEAEAEAEMLKYD----SGNVDGVDPERPS 60

Query: 152 TPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDD 211
           TPP+GEEEFTDDDGTTYKW+R LRAWVPQE+QADEE GY LEEMTFV+QEEVFP+LTVDD
Sbjct: 61  TPPEGEEEFTDDDGTTYKWNRGLRAWVPQESQADEE-GYGLEEMTFVKQEEVFPILTVDD 120

Query: 212 TLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPD 271
           TL NKED  D G VEEKDTKQ AKRKEPE KTEKKEANKPPDSWFEL  NTHVYVTGLPD
Sbjct: 121 TLENKEDNIDIGTVEEKDTKQSAKRKEPENKTEKKEANKPPDSWFELVVNTHVYVTGLPD 180

Query: 272 DVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLL 331
           DVTIEEVVEVFSKCGIIKEDPESK+PRVKLYFDKETGRKKGDALVTYLKEPSVALATQ+L
Sbjct: 181 DVTIEEVVEVFSKCGIIKEDPESKRPRVKLYFDKETGRKKGDALVTYLKEPSVALATQIL 240

Query: 332 DGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMI 391
           DG  FR G KI M+VTPAKFEQKGE+F+PKQ DK+KK KLK+VEEKMLGWGGRDDSKLMI
Sbjct: 241 DGTPFRLGGKIPMTVTPAKFEQKGEKFVPKQADKRKKQKLKKVEEKMLGWGGRDDSKLMI 300

Query: 392 PATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDR 451
           PATV+LSNMFTTAEMRE+ SLRDELEVD++EECGKLGPVD +KVCE+NPHGVVLVRYKDR
Sbjct: 301 PATVVLSNMFTTAEMREDSSLRDELEVDIQEECGKLGPVDSVKVCESNPHGVVLVRYKDR 360

Query: 452 TDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
            DAK+CI +MDGRWFGG+QIHAVEDDGSVNHA LRDYDDEGERLKKFAAELEAE
Sbjct: 361 KDAKECIKVMDGRWFGGKQIHAVEDDGSVNHALLRDYDDEGERLKKFAAELEAE 400

[Close]

BLAST of Spo12060.1 vs. NCBI nr
Match: gi|568836436|ref|XP_006472250.1| (PREDICTED: splicing factor U2AF-associated protein 2 [Citrus sinensis])

HSP 1 Score: 615.1 bits (1585), Expect = 1.100e-172
Identity = 322/510 (63.14%), Postives = 375/510 (73.53%), Query Frame = 1


		  
Query: 40  GWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHA 99
           GWYI+D  QQ +GPY I+EL EHFLNGYL E+T VW+QGR +WQPLSS+P+ ++G+    
Sbjct: 25  GWYILDENQQHVGPYAISELCEHFLNGYLLETTLVWSQGRSEWQPLSSIPQFLSGISQQV 84

Query: 100 TELSASVPAIK-------------------------------DEEFEKWQKEVKEAEAEA 159
              S +VP                                  D+EFEKWQ+EV+EAE EA
Sbjct: 85  ARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQGVPSHVDDEFEKWQREVREAEIEA 144

Query: 160 EAAMLNNGSASGDVDGV----EQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQA 219
           E   L NGSAS  V G     + +     P+GE+EFTDDDGT YKWDR LRAWVPQE+ +
Sbjct: 145 E--RLKNGSASDSVGGYMGGDDHDGVPASPEGEDEFTDDDGTRYKWDRGLRAWVPQEDTS 204

Query: 220 DEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKE-DTTDAGAVEEK--------DTKQRAK 279
            + +GY +EEMTF+++EEVFP   V D LAN E       + EEK        + K   K
Sbjct: 205 SQNDGYGIEEMTFLKEEEVFPTGNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGK 264

Query: 280 RKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK 339
           RK+P+ + EKKEANKPPDSWFELK NTHVYVTGLPDDVT+EE+VEVFSKCGIIKEDPE+K
Sbjct: 265 RKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETK 324

Query: 340 KPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKG 399
           KPR+K+Y DKETG KKGDALVTYLKEPSVALATQLLDG  FRPG KI MSVT AKFEQKG
Sbjct: 325 KPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPGGKIPMSVTQAKFEQKG 384

Query: 400 ERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDE 459
           ERFI KQ D KKK KLK+VEEKMLGWGGRDD+KL IPATVIL  MFT AEMR + +LR E
Sbjct: 385 ERFIAKQVDSKKKKKLKKVEEKMLGWGGRDDAKLTIPATVILRFMFTPAEMRADENLRSE 444

Query: 460 LEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVE 506
           LE DV+EEC K+GPVD +KVCEN+P GVVLVR+KDR DA+KCI+LM+GRWFGGRQIHA E
Sbjct: 445 LEADVQEECVKIGPVDSVKVCENHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASE 504

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R906_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093470 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 2.800e-289
Identity = 503/505 (99.60%), Postives = 504/505 (99.80%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK
Sbjct: 1   MSSDENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ
Sbjct: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE
Sbjct: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
           PKTEKKEANKPPDSWFELKQNTHVYVTGLP+DVTIEEVVEVFSKCGIIKEDPESKKPRVK
Sbjct: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPEDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV
Sbjct: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV
Sbjct: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHAALRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHAALRDYDDEGERLKKFAAELEAE 505

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRU7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074650 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 1.500e-226
Identity = 406/505 (80.40%), Postives = 442/505 (87.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           MSS ++ SL Q   S   +Q   G  G  +QHLPEN+ +GWYI+D +QQQIGPYTI+EL+
Sbjct: 1   MSSADDSSLHQ---SSVDQQ---GAEGIINQHLPENAELGWYIVDASQQQIGPYTISELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVH  A+          D+EFEKWQKE
Sbjct: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHFSASN---------DDEFEKWQKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180
           VKEAEAEAE    +    SG+VDGV+ ERPSTPP+GEEEFTDDDGTTYKW+R LRAWVPQ
Sbjct: 121 VKEAEAEAEMLKYD----SGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRAWVPQ 180

Query: 181 ENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPE 240
           E+QADEE GY LEEMTFV+QEEVFP+LTVDDTL NKED  D G VEEKDTKQ AKRKEPE
Sbjct: 181 ESQADEE-GYGLEEMTFVKQEEVFPILTVDDTLENKEDNIDIGTVEEKDTKQSAKRKEPE 240

Query: 241 PKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVK 300
            KTEKKEANKPPDSWFEL  NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK+PRVK
Sbjct: 241 NKTEKKEANKPPDSWFELVVNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKRPRVK 300

Query: 301 LYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIP 360
           LYFDKETGRKKGDALVTYLKEPSVALATQ+LDG  FR G KI M+VTPAKFEQKGE+F+P
Sbjct: 301 LYFDKETGRKKGDALVTYLKEPSVALATQILDGTPFRLGGKIPMTVTPAKFEQKGEKFVP 360

Query: 361 KQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDV 420
           KQ DK+KK KLK+VEEKMLGWGGRDDSKLMIPATV+LSNMFTTAEMRE+ SLRDELEVD+
Sbjct: 361 KQADKRKKQKLKKVEEKMLGWGGRDDSKLMIPATVVLSNMFTTAEMREDSSLRDELEVDI 420

Query: 421 REECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSV 480
           +EECGKLGPVD +KVCE+NPHGVVLVRYKDR DAK+CI +MDGRWFGG+QIHAVEDDGSV
Sbjct: 421 QEECGKLGPVDSVKVCESNPHGVVLVRYKDRKDAKECIKVMDGRWFGGKQIHAVEDDGSV 480

Query: 481 NHAALRDYDDEGERLKKFAAELEAE 506
           NHA LRDYDDEGERLKKFAAELEAE
Sbjct: 481 NHALLRDYDDEGERLKKFAAELEAE 485

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A067H1I9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009565mg PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.300e-172
Identity = 321/510 (62.94%), Postives = 375/510 (73.53%), Query Frame = 1


		  
Query: 40  GWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHA 99
           GWYI+D  QQ +GPY I+EL EHFLNGYL E+T VW+QGR +WQPLSS+P+ ++G+    
Sbjct: 25  GWYILDENQQHVGPYAISELCEHFLNGYLLETTLVWSQGRSEWQPLSSIPQFLSGISQQV 84

Query: 100 TELSASVPAIK-------------------------------DEEFEKWQKEVKEAEAEA 159
              S +VP                                  D+EFEKWQ+EV+EAE EA
Sbjct: 85  ARGSTAVPCNDGIEEVREQIEEAAGMQSQSFSSAEQGVPSHVDDEFEKWQREVREAEIEA 144

Query: 160 EAAMLNNGSASGDVDGV----EQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQA 219
           E   L NGSAS  V G     + +     P+GE+EFTDDDGT YKWDR LRAWVPQE+ +
Sbjct: 145 E--RLKNGSASDSVGGYMGRDDHDGVPASPEGEDEFTDDDGTRYKWDRGLRAWVPQEDTS 204

Query: 220 DEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKE-DTTDAGAVEEK--------DTKQRAK 279
            + +GY +EEMTF+++EEVFP + V D LAN E       + EEK        + K   K
Sbjct: 205 SQNDGYGIEEMTFLKEEEVFPTVNVTDDLANDEVGKEKLNSTEEKVNSADNVVEEKHNGK 264

Query: 280 RKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESK 339
           RK+P+ + EKKEANKPPDSWFELK NTHVYVTGLPDDVT+EE+VEVFSKCGIIKEDPE+K
Sbjct: 265 RKQPDKQVEKKEANKPPDSWFELKVNTHVYVTGLPDDVTVEEMVEVFSKCGIIKEDPETK 324

Query: 340 KPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKG 399
           KPR+K+Y DKETG KKGDALVTYLKEPSVALATQLLDG  FRP  KI MSVT AKFEQKG
Sbjct: 325 KPRIKIYVDKETGMKKGDALVTYLKEPSVALATQLLDGTPFRPDGKIPMSVTQAKFEQKG 384

Query: 400 ERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDE 459
           ERFI KQ D KKK KLK+VEEKMLGWGGRDD+KL IPATVIL  MFT AEMR + +LR E
Sbjct: 385 ERFIAKQVDSKKKKKLKKVEEKMLGWGGRDDAKLTIPATVILRFMFTPAEMRADENLRSE 444

Query: 460 LEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVE 506
           LE DV+EEC K+GPVD +KVCEN+P GVVLVR+KDR DA+KCI+LM+GRWFGGRQIHA E
Sbjct: 445 LEADVQEECVKIGPVDSVKVCENHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASE 504

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: V7BDQ2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G117900g PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 4.900e-169
Identity = 309/525 (58.86%), Postives = 386/525 (73.52%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           M+S       QPP  P  E++               + VGWY++   QQQ+GPY  +EL+
Sbjct: 1   MNSQNGGESHQPPPQPQGEKV---------------TEVGWYVLGEDQQQVGPYAFSELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYL+E+TFVW++GR +WQPLSSV +L T ++    + SA+V A   +EFE+W+KE
Sbjct: 61  EHFLNGYLSENTFVWSEGRSEWQPLSSVSDLWTQINRQGLDSSAAVSAHDVDEFERWEKE 120

Query: 121 VKEAEAEAEAAMLNN--GSASGDVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWV 180
           ++EAEA+ E +   +  G+  G   G + ERPSTPP+GEEEFTDDDGT YKWDR+LRAWV
Sbjct: 121 IQEAEAQVEGSDFGSFAGNVGGTAAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWV 180

Query: 181 PQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQRA---- 240
           PQE      E YR+E+MTF+++EEVFP +T  D     ED++  G V +   K+      
Sbjct: 181 PQEYPTGSTEPYRVEDMTFLQEEEVFPTITNSDASEKFEDSSKLG-VSDPSLKEEVNNAN 240

Query: 241 --------------KRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVE 300
                         KRK  + +T+KKEANKPPDSWFELK NTHVYV GLP+DVT +E+VE
Sbjct: 241 KTNEANDISVVAGGKRKLSDQQTDKKEANKPPDSWFELKINTHVYVNGLPEDVTTDEIVE 300

Query: 301 VFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGE 360
           VFSKCGIIKEDPE+K+PRVKLY DKETG+ KGDALVTYLKEPSVALA Q+LDGA FRPG 
Sbjct: 301 VFSKCGIIKEDPETKRPRVKLYVDKETGKNKGDALVTYLKEPSVALAIQILDGAPFRPGG 360

Query: 361 KITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNM 420
           KI MSV+ AKF+QKG+RF+ KQ D KKK KLKRVEEKMLGWGGRDD+K+ IPAT+IL  M
Sbjct: 361 KIPMSVSQAKFQQKGDRFVSKQVDNKKKKKLKRVEEKMLGWGGRDDAKVSIPATMILRFM 420

Query: 421 FTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDL 480
           F+ AEMR + +LR ELE DV+EEC KLGPVD +K+CEN+P GVVLV++KDR DA+KCI+L
Sbjct: 421 FSPAEMRADENLRLELEEDVKEECTKLGPVDSVKICENHPQGVVLVKFKDRKDAQKCIEL 480

Query: 481 MDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
           M+GRWFGGRQ+HA EDDGSVNHA +RD  ++  RL++F AELE +
Sbjct: 481 MNGRWFGGRQVHASEDDGSVNHALVRDLQEDAIRLEQFGAELEGD 509

[Close]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SPZ8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G153700 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 4.200e-168
Identity = 312/524 (59.54%), Postives = 388/524 (74.05%), Query Frame = 1


		  
Query: 1   MSSVENPSLQQPPQSPTHEQLLVGTAGPTSQHLPENSLVGWYIIDPTQQQIGPYTIAELK 60
           M+S       QPP  P  E++               + VGWY++   QQQ+GPY  +EL+
Sbjct: 1   MNSQNGGESHQPPPLPQGEKV---------------TEVGWYVLGEDQQQVGPYAFSELR 60

Query: 61  EHFLNGYLTESTFVWAQGRPDWQPLSSVPELMTGVHCHATELSASVPAIKDEEFEKWQKE 120
           EHFLNGYL+E+TFVW++GR +WQPLSSV +L T ++   ++ S +V A   +EFE+W+KE
Sbjct: 61  EHFLNGYLSENTFVWSEGRSEWQPLSSVSDLWTQINQQGSDFSTAVSAHDVDEFERWEKE 120

Query: 121 VKEAEAEAEAAMLNNGSASGDVD----GVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRA 180
           +KEAEA+ E +  + GS SG+V     G + ERPSTPP+GEEEFTDDDGT YKWDR+LRA
Sbjct: 121 IKEAEAQVEGS--DFGSFSGNVGSTAAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRA 180

Query: 181 WVPQENQADEEEGYRLEEMTFVEQEEVFPVLTVDDTLANKEDTTDAGAVEEKDTKQR--- 240
           WVPQE      E Y +E+MTF+++EEVFP +T  D     ED+++   V +   K+    
Sbjct: 181 WVPQEYPTGSTEPYGVEDMTFLQEEEVFPTITNSDASEKIEDSSEL-VVSDPSLKEEPNE 240

Query: 241 ------------AKRKEPEPKTEKKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEV 300
                        KRK  + +T+KKEANKPPDSWFELK NTHVYV GLP+DVT +E+VEV
Sbjct: 241 TNETNNASVVAGGKRKLSDQQTDKKEANKPPDSWFELKINTHVYVNGLPEDVTTDEIVEV 300

Query: 301 FSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEK 360
           FSKCGIIKEDPE+K+PRVKLY DKETGRKKGDALVTYLKEPSVALA Q+LDGA FRPG K
Sbjct: 301 FSKCGIIKEDPETKRPRVKLYVDKETGRKKGDALVTYLKEPSVALAIQILDGAPFRPGGK 360

Query: 361 ITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMF 420
           I MSV+ AKFEQKG++F+ +Q D KKK KLKRVEEKMLGWGGRDD+K+ IPATVIL  MF
Sbjct: 361 IPMSVSQAKFEQKGDKFVSRQVDNKKKKKLKRVEEKMLGWGGRDDAKVSIPATVILRFMF 420

Query: 421 TTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLM 480
           + AEMR + +LR ELE DV+EEC KLGPVD +K+CEN+P GVVLV++KDR DA+KCI+LM
Sbjct: 421 SPAEMRADENLRLELEEDVKEECTKLGPVDSVKICENHPQGVVLVKFKDRKDAQKCIELM 480

Query: 481 DGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLKKFAAELEAE 506
           +GRWFGGR IHA EDDGSVNHA +RD  ++  RL++F AELE +
Sbjct: 481 NGRWFGGRLIHASEDDGSVNHALVRDLQEDAIRLEQFGAELEGD 506

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_MOUSE (HIV Tat-specific factor 1 homolog OS=Mus musculus GN=Htatsf1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.000e-39
Identity = 124/368 (33.70%), Postives = 193/368 (52.45%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           +G  Q  PS       +  DD  T Y+WD   +AW P+  +         + +   +   
Sbjct: 28  EGDTQNEPSGEAHSLGQPPDD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 87

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKKEANKPPDSWFELKQ-- 262
            F       + AN +D  +  AVEE   K+  +  + + K EK++A      WF +++  
Sbjct: 88  GFSSDGASSSTANVQDA-NTKAVEEPPQKEVPETPDSKRKGEKRKAES---GWFHVEEDR 147

Query: 263 NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLK 322
           NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  YLK
Sbjct: 148 NTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD-DQGNLKGDGLCCYLK 207

Query: 323 EPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEKML 382
           + SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K L
Sbjct: 208 KESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSLQQKQL 267

Query: 383 GWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVC 442
            W        ++L     VIL NMF   +  ++  + +E+  D+R EC K G +  + + 
Sbjct: 268 DWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLF 327

Query: 443 ENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGERLK 502
           + +P GV  V +++  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ERL+
Sbjct: 328 DRHPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREERLR 376

Query: 503 KFAAELEA 505
            + A L A
Sbjct: 388 GWEAFLNA 376

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_PONAB (HIV Tat-specific factor 1 homolog OS=Pongo abelii GN=HTATSF1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.200e-38
Identity = 124/370 (33.51%), Postives = 188/370 (50.81%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           DG  Q      PD   +   D  T Y+WD   +AW P+  +         + +   +   
Sbjct: 27  DGDTQTDAGGEPDSLGQQPTD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 86

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKK--EANKPPDSWFELKQ 262
            F       + AN ED      V  +  ++  + K PEP   +K  E  K    WF +++
Sbjct: 87  GFSNDGASSSTANVED------VHARTAEEPPQEKAPEPTDPRKKGEKRKAESGWFHVEE 146

Query: 263 --NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTY 322
             NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  Y
Sbjct: 147 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCY 206

Query: 323 LKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEK 382
           LK  SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K
Sbjct: 207 LKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQK 266

Query: 383 MLGWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIK 442
            L W        S++     VI+ NMF   +  ++  + +E+  D+R EC K G +  + 
Sbjct: 267 QLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLL 326

Query: 443 VCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGER 502
           + + +P GV  V ++D  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ER
Sbjct: 327 LFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREER 375

Query: 503 LKKFAAELEA 505
           L+ + A L A
Sbjct: 387 LRGWEAFLNA 375

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: HTSF1_HUMAN (HIV Tat-specific factor 1 OS=Homo sapiens GN=HTATSF1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.200e-38
Identity = 124/370 (33.51%), Postives = 188/370 (50.81%), Query Frame = 1


		  
Query: 143 DGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQENQADEEEGYRLEEMTFVEQEE 202
           DG  Q      PD   +   D  T Y+WD   +AW P+  +         + +   +   
Sbjct: 27  DGDTQTDAGGEPDSLGQQPTD--TPYEWDLDKKAWFPKITE---------DFIATYQANY 86

Query: 203 VFPVLTVDDTLANKEDTTDAGAVEEKDTKQRAKRKEPEPKTEKK--EANKPPDSWFELKQ 262
            F       + AN ED      V  +  ++  + K PEP   +K  E  K    WF +++
Sbjct: 87  GFSNDGASSSTANVED------VHARTAEEPPQEKAPEPTDARKKGEKRKAESGWFHVEE 146

Query: 263 --NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTY 322
             NT+VYV+GLP D+T++E +++ SK GII  DP++++ +VKLY D + G  KGD L  Y
Sbjct: 147 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQ-GNLKGDGLCCY 206

Query: 323 LKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLK-RVEEK 382
           LK  SV LA +LLD    R G K+ + V  AKF+ KGE    K+  K K  K K  +++K
Sbjct: 207 LKRESVELALKLLDEDEIR-GYKLHVEV--AKFQLKGEYDASKKKKKCKDYKKKLSMQQK 266

Query: 383 MLGWGGR---DDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIK 442
            L W        S++     VI+ NMF   +  ++  + +E+  D+R EC K G +  + 
Sbjct: 267 QLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLL 326

Query: 443 VCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGER 502
           + + +P GV  V ++D  +A  CI  +DGRWFGGRQI A   DG+ ++       +  ER
Sbjct: 327 LFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSREREER 375

Query: 503 LKKFAAELEA 505
           L+ + A L A
Sbjct: 387 LRGWEAFLNA 375

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: UAP2_SCHPO (Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uap2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.800e-31
Identity = 111/365 (30.41%), Postives = 173/365 (47.40%), Query Frame = 1


		  
Query: 170 WDRSLRAWVPQENQA------DEEEGYRLEEMTFVEQEEVFPV-LTVDDTLANKEDTTDA 229
           WD  +  W    ++       DEE+ ++  +   ++  +       V D  A   +  ++
Sbjct: 7   WDERIHRWRCLGSEGNELIYIDEEQTWKDYDPNSLKMNKAGSTGAEVSDVTAEATEGKES 66

Query: 230 GAVEEKDTKQRAKRKEPE----------PKTEKKEANKPPDSWFELKQNTHVYVTGLPDD 289
              E++ TK+  +    E           K+E  EA+  P        N  VY+ GLP D
Sbjct: 67  SNGEDRHTKRLYESTSAEGYPSGSRNKKSKSENSEASPAPVI------NKAVYIQGLPLD 126

Query: 290 VTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLD 349
           VT++E+ EVF KCG+I ++ ++  PR+K+Y   E G  KGDAL+ + +  SV LA QL D
Sbjct: 127 VTVDEIEEVFKKCGVIAKNIDNGTPRIKIY-RTEDGTPKGDALIVFFRSESVELAEQLFD 186

Query: 350 GASFRPGEKITMSVTPAKFEQKGERFIPKQTDKKKKNKLKRVEEKML----GWGGRDDS- 409
              FR G    M V  A  + K E+ + K      K K  R+ ++ +     W   D+  
Sbjct: 187 DTEFRYGSGQKMRVQKANIDYKKEKTVNKDVGGALKKKALRLRQQQMQQISSWDDVDEEV 246

Query: 410 ----KLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGV 469
               K      V+L ++FT  E+ +   L  +L+ D+ EE  K G V  + + +  P GV
Sbjct: 247 DDKRKKRFNKIVVLKHIFTLEELDKTPELLIDLKDDITEEAEKCGRVTNVVLYDKEPDGV 306

Query: 470 VLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHA-----ALRDYDDEGERLKKF 504
           V VR+ +  +A+ C+ LM GR+F GR + A   DG V         L D +DE +RL+KF
Sbjct: 307 VTVRFSNNEEAEACVRLMQGRYFDGRVVEASIYDGKVRFQKSGKHTLDDEEDEEKRLEKF 364

[Close]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Match: CUS2_YEAST (Cold sensitive U2 snRNA suppressor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUS2 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.100e-18
Identity = 91/287 (31.71%), Postives = 153/287 (53.31%), Query Frame = 1


		  
Query: 221 DAGAVEEKDTKQRAKRKEPEPKTEKKEAN--KPPDSWFELKQNTHVYVTGLPDDVTIEE- 280
           DA  +E K   ++ K++E   + + KE+N  K    +    +NT +Y++GLP D T +E 
Sbjct: 2   DADELELKGHLKKLKKEELLRRKQLKESNLQKRELEYNNASKNTSIYISGLPTDKTTKEG 61

Query: 281 VVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLKEPSVALATQLLDGASFR 340
           + E F K G+I+ + + + P  KLY + + G  KGDAL+TY KE SV LA ++++ + F 
Sbjct: 62  LTEQFCKYGMIRTNRDGE-PLCKLYVN-DKGAFKGDALITYSKEESVTLAIEMMNESIFL 121

Query: 341 PGEKITMSVTPAKFEQK-GERFIPKQTDKKKKN----KLKRVEE-KMLGWG-----GRDD 400
            G++I   V  A+F+ K G+    K+ D K+ N     +KR+++ K  G G       D+
Sbjct: 122 -GKQI--RVERAQFQNKEGDNMHGKENDLKEFNGPEPPIKRLKKAKSEGEGEVIDYNDDE 181

Query: 401 SKLMIPATVILSNMFTTAEMREELSLRDELEVDVREECGKLGPVDFIKVCENNPHGVVLV 460
           S      TVI +N+F   +      + D ++ D+ E C ++G VD I V  N   G   V
Sbjct: 182 SLAKADRTVIFANVFNIYKSYTNDDIND-IQEDLLEGCEEIGQVDSISVSPNK--GEATV 241

Query: 461 RYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAALRDYDDEGE 494
            +K+   A +C  +M GR+F G+++ A    G  N ++  D +++ E
Sbjct: 242 VFKNNKVALQCCKIMTGRYFDGQKLLAF-ISGDENTSSTSDKNEDSE 279

[Close]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Match: AT5G16260.1 (RNA binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 539.7 bits (1389), Expect = 2.000e-153
Identity = 287/500 (57.40%), Postives = 358/500 (71.60%), Query Frame = 1


		  
Query: 39  VGWYIIDPTQQQIGPYTIAELKEHFLNGYLTESTFVWAQGRPDWQPLSSVPELMT----- 98
           VGWYI+   QQ +GPYT +EL  HF NGYL E+T VWA GR +WQPLS++P+LM+     
Sbjct: 23  VGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWADGRSEWQPLSAIPDLMSRISGA 82

Query: 99  ------------------GVHCHATELSASVPAIKDEEFEKWQKEVKEAEAEAEAAMLNN 158
                             G      + +AS  A  ++EFEKWQ+E+K+AEAEAE   L N
Sbjct: 83  EIAYPAVGSSGLINGSNAGTRQEKQDYTAS--ASTEDEFEKWQREIKDAEAEAE--RLKN 142

Query: 159 GSASG-DVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQEN-QADEEEGYRLE 218
           GS SG ++   + ER S+PP+GE+EFTDDDGT YKWDR+ R WVPQ++      + Y LE
Sbjct: 143 GSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRVWVPQDDPPLGSVDPYGLE 202

Query: 219 EMTFVEQEEVFPVLTVDDTLANKEDTT---------DAGAVEEKDTKQRAKRKEPEPKTE 278
           EMTF +++EVFP + + DT  +K+D +         + G+ E  +     KRK PEP+TE
Sbjct: 203 EMTFAKEDEVFPTINILDTSVDKKDASKDDVAGKKEEDGSDETAEINSNGKRKLPEPETE 262

Query: 279 KKEANKPPDSWFELKQNTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFD 338
           KKE NKPPDSWFELK N H+YV GLPDDVTIEEV EVFSKCGIIKED ++ KPR+KLY D
Sbjct: 263 KKEPNKPPDSWFELKVNPHIYVNGLPDDVTIEEVAEVFSKCGIIKED-DTGKPRIKLYSD 322

Query: 339 KETGRKKGDALVTYLKEPSVALATQLLDGASFRPGEKITMSVTPAKFEQKGERFIPKQTD 398
           K TG+ KGDAL++Y+KEPSV LA ++LDGA  RP +K+ MSV+ AKFEQKGERFI KQTD
Sbjct: 323 KATGKLKGDALISYMKEPSVDLAIKILDGAPLRPADKLLMSVSRAKFEQKGERFITKQTD 382

Query: 399 KKKKNKLKRVEEKMLGWGGRDDSKLMIPATVILSNMFTTAEMREELSLRDELEVDVREEC 458
            KKK KLK+VE+K+LGWGG DDSK+ IPATV+L  MF+ AE+  +  L  ELE DV+EE 
Sbjct: 383 NKKKKKLKKVEQKLLGWGGTDDSKVSIPATVVLRYMFSPAELMADEDLVAELEEDVKEES 442

Query: 459 GKLGPVDFIKVCENNPHGVVLVRYKDRTDAKKCIDLMDGRWFGGRQIHAVEDDGSVNHAA 505
            K GP D +KVCE++P GVVLVR+KDR DA+KCI+ M+GRW+  RQIHA  DDGSVNHA 
Sbjct: 443 LKHGPFDSVKVCEHHPQGVVLVRFKDRRDAQKCIEAMNGRWYAKRQIHASLDDGSVNHAT 502

[Close]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Match: AT1G50300.1 (TBP-associated factor 15)

HSP 1 Score: 52.0 bits (123), Expect = 1.300e-6
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 1


		  
Query: 261 NTHVYVTGLPDDVTIEEVVEVFSKCGIIKEDPESKKPRVKLYFDKETGRKKGDALVTYLK 320
           N  VYV+ LP       + + F   G++K D  +  P+V LY DKET   KGDA VTY +
Sbjct: 7   NGSVYVSNLPLGTDENMLADYFGTIGLLKRDKRTGTPKVWLYRDKETDEPKGDATVTY-E 66

Query: 321 EPSVALA 328
           +P  ALA
Sbjct: 67  DPHAALA 72

The following BLAST results are available for this feature:

BLAST of Spo12060.1 vs. NCBI nr
BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
BLAST of Spo12060.1 vs. TAIR (Arabidopsis)

BLAST of Spo12060.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902208543\|gb\|KNA15975.1\|	4.0e-289	99.6	hypothetical protein SOVF_0934...	[more]
gi\|731326133\|ref\|XP_010673865.1\|	2.2e-226	80.4	PREDICTED: splicing factor U2A...	[more]
gi\|731326135\|ref\|XP_010673866.1\|	1.8e-209	83.8	PREDICTED: splicing factor U2A...	[more]
gi\|731326137\|ref\|XP_010673867.1\|	1.4e-188	82.8	PREDICTED: splicing factor U2A...	[more]
gi\|568836436\|ref\|XP_006472250.1\|	1.1e-172	63.1	PREDICTED: splicing factor U2A...	[more]

BLAST of Spo12060.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R906_SPIOL	2.8e-289	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CRU7_BETVU	1.5e-226	80.4	Uncharacterized protein OS=Bet...	[more]
A0A067H1I9_CITSI	1.3e-172	62.9	Uncharacterized protein OS=Cit...	[more]
V7BDQ2_PHAVU	4.9e-169	58.8	Uncharacterized protein OS=Pha...	[more]
A0A0S3SPZ8_PHAAN	4.2e-168	59.5	Uncharacterized protein OS=Vig...	[more]

BLAST of Spo12060.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
HTSF1_MOUSE	9.0e-39	33.7	HIV Tat-specific factor 1 homo...	[more]
HTSF1_PONAB	1.2e-38	33.5	HIV Tat-specific factor 1 homo...	[more]
HTSF1_HUMAN	1.2e-38	33.5	HIV Tat-specific factor 1 OS=H...	[more]
UAP2_SCHPO	1.8e-31	30.4	Splicing factor U2AF-associate...	[more]
CUS2_YEAST	5.1e-18	31.7	Cold sensitive U2 snRNA suppre...	[more]

BLAST of Spo12060.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G16260.1	2.0e-153	57.4	RNA binding (RRM/RBD/RNP motif...	[more]
AT1G50300.1	1.3e-6	43.2	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 419..472 score: 3.1E-7coord: 264..336 score: 6.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 263..345 score: 2.8E-8coord: 394..474 score: 4.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 393..471 score: 8.808coord: 262..349 score: 11
IPR003169	GYF domain	GENE3D	3.30.1490.40		coord: 41..88 score: 3.
IPR003169	GYF domain	unknown	SSF55277	GYF domain	coord: 29..90 score: 3.6
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 394..473 score: 2.6E-18coord: 232..342 score: 4.7
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 254..353 score: 1.48E-15coord: 413..473 score: 3.36
IPR025640	Domain of unknown function DUF4339	PFAM	PF14237	DUF4339	coord: 41..85 score: 6.5
None	No IPR available	unknown	Coil	Coil	coord: 485..505 score: -coord: 114..134 scor
None	No IPR available	PANTHER	PTHR15608	SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2	coord: 31..505 score: 1.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding