Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAGAAATGGGGAATCCAAGTAGGAGTGGTAGGAGCATTGTTTCTATCAGTGGCGTCATCGGTTTCTATTGTCATTTGCAACAAAGCCTTGATGAGTAATCTTGGCTTCCCTTTTGGTACGTCTTCCTTTTTTTTCCTTCCTCTTCTTTTCTCAATTTACCTTTAAGCTTTATGCCTTTTTAAAAAAAATTGTGATTTATCCGTGGACTTAATTTCTTAGTACTTTAATTTGTGTGTAGATGTCATATAAAAAAACAAATAGCAAAAGGAATTTCAAATATCACTAAAAGAAATTGTACGTACCCGTCATTAAAGGTCAATAGTGGTGGATTTTTTTGTCGCGAATCCGTCATAAAGGGGGTCAGTCATTTACGACGGTTATTCCCGTCTTTATTTGGTTGTTAGTCCCGTCACAAAAGGCTTTTGCGACGCAAATTTTAACTCACCAATAGATTGTCATTAATGATACATATTCTTGTAGTGTATAAATTAATATCCAAAGTTGTCTATCCGTAGGTTATAGCCTCAAATTTCTACTTTTACATATAACAAGTTAAAAGTAACTCGACATTTAAAAAACAACAACATTGAGTCGGATTCAGGTAAACGAAGATTGAAAGTGATGTAATAGCAATTAAATGCTTTAAAAATTAATGATGAATTACTTTTAGTCTCAGTTTGCTGGAATTTGGATCGTAATTTTAAATGTCGGGCATATTTGAGGTTTCAACCCGTAGTGACAAGTTTTTACTGTTGTATTAGACAAATTACACTACAAGAATTTGTATCTTTAACGACAACCTAATTACGACGGGTCAAAAATCCCGTCGCAAAAGCCTTTTGCGACGGGACTAACAACCAAACAATGACGGGAATAACCGTCGCAAATGTCTTTTACGACGGGTTTACGACGGATTTACGACGGGATTTCTATTAACGACGGCCCCCTTTTATGACGGGCTCGCGACAGGAAATCCCGTCGTTAATCAACGATTATTGACCTTTCGCGACGGGATTTCCCGTCGTTAATATTACAATTTCTTGTAGTGAAAGTTTCCTAAATAAAATACACTATAAGGCCTTATTGTAGAATAATATCTAGATTTTATTTTTATTTTTATTTTTAAAATAAAGTATCTCTTGAAAAATCAAGACTTTCCAATTATATATTAGTAGGTGGTTCAAATAAAATTTAAGAGGTTTCATTTTTTATATATGATATGTTTTTTATGTTTTTATATTGTGACCATTTCGCGGTTTTATCTAATACAGATTAGAAACTAAGTGTTTTCAATTGACAATTGTCTACGTATAACCAAAAGTGATTTGAGCTACGTATAAGCTTGCATATACTTCATATTTTTGGACAGGTGAAGGTTCTAGGTCTTAGACATATTTAAATAGTTTTTAAACACATTTTTAGAAATTGTTAAAATTATCTATATATAGTAATGAAACATGATTCATTTAATAGTAAATAAATTGACCTTTCTTCAGAGGAAAGGCAACATAATTATAATTGTCGATTGCAATAAATATGTATCTTTTTTTTTTTTTTAAAGATAACAAACAAAGTTAGGTTAGTCTTCTCTCAAGGCTGTACCCTAACTTATCAGAAGATATAAAATAAGAAAATTTACTATCTACATAGGAGTCAATAAATAAATAGGCAAATTTGTTAAAAAGGACCTTTTATAATCCAAATTTTGCGAGAAAGGACCTTATATATTTTTTTTTGTGAAATAACACCTTAATGTAAATTTTTTTGCGAGAAAGGACCTTATATAAATTTTTTTTGTGAAATCACACGTTAATGTAATTTTTTTTGCGAAAGACAACCAAGAGTAAATTTCCGGCATTGACTGAGTTTTTTCCGGCCATTGACTTGCACGTGAGAAGCACGTGTGGCATTATTTTGCTAATCACACCCAATTTTCCTCCAAAATTCTAAGCTTTAAAACCTAAAGTTGAAAAGAAAAACCGAAATAAAATCAAGTTTGAAAATTCAAGAGTCAGGAAAATCATTGTCTTTAGCCAACGTAAGCCACACGTGCTGCTCACGTGCAAGTTAATGGCCGGAAAAGCTCAGTCAATGCCGGAAACATTCCTTAGGTCCTTTCTCGCAAAAAAAATTACTTTAAGGTGTGTTTTCACAAAAAAAATTATATAAGGTCCTTTCTCGCAAAATTTGAGTTATAAAAGGTCCTTTTTGGCAAATTTGCCAAATAAATATGTATCTTTGCTTTCAAACAAATTGTTGTTTGGTTGTCCAGATTAAATTTCATTCATTGAAAAATAGGCTTCACCAGCTTATGTTGGTTGAGCATAACAACAGGTAGTTCAACCAACAAAAGTACAAAACATAAGAATATTGAACTTGCAATTCGATCACGAACATTTACTGTAAAAAACGCAGACTACATTTACCAAATGCAGGTACTCCTATGTTATATTTAGGAACAGTAGGGGTAATTCTGTAGTTATGTTTACATTATATGATTCTGTAATTTTGTGTAACGAAAATAGTGTTAGTCATCAATAAATGATGACTGAATATATCGAGAGAAAATACTGCCACCTTGGGATATATTACCGCCTACAACAGGTTTATGACGTGTTAGGCCCAATAAAAGTCATTGATTAATAAATGTGGGATTATTAAAAAAATATATCGTAAGTGGGCTTAATAAAAGAAAATGAGCCAAAGATTGAATTGATATTACCAATTTTTCCTATCGAATAAGCATATTCATGATATATATGTACGGAGCGTTTTATCGTAACATAATCTATACGATTTTATAAGATAGGTTTGTATCATTGTATGTGCAGCGACGACACTGACAAGTTGGCACTTGATGGTAACATATTGTACCCTTCACATAGCGCAACGCCTCAATTTTTTCGAGACAAAAACAGTGGAAATGAAGACAGTAATCTTGTTTGGAATACTTAATGGTATTTCAATAGGACTTCTTAACTTGAGCCTTGGTTTCAACTCCATTGGTTTTTACCAGATGACTAAGCTTGCCATTATACCTTTCACTGTCCTCTTGGAAACTCTTTTCCTCAACAAAAACTTCAGGTTTATTTAAGGCTCAACCTAAAATTAGCATACGAAATCATTTTTAGAAATTAGACTGACGCCATCTCCAATATATATATATATATATATATATATATATTATTTCAGTCGGAAAATCAAGTTTTCTCTGTTCGTGTTGCTGGTGGGAGTTGGGATCGCCTCGATCACCGACCTGCAGCTCAATTTCGTTGGCACAGTTCTTTCTGGTTTAGCCATAGTCACAACATGCGTTGGTCAGATTGTATCCTTAAATCATTATTAGTGCTCTTAATTGATTATTAAATAGGTTAATGATACAATTAATTAATACATGAATTCCTTAACCCCATGTATTATTTAGCTGACAAACACAATACAGAAAAGGCTTAATGTATCATCGACACAATTGCTGTATCAATCAGCACCATTCCAAGCAGCTGTTCTGTTCGTGTTTGGTCCTATGGTCGATAAGTTCCTCACCAAACAAAGTGTCTTTGCGTTCAAGTATTCCCCCGTTGTCTTGGTACGTACGTTACAACTTTTTCCATCACGTACACATCGATCAGATCGATTGATATGACCTAATTAATTAATTTCCATCCTCTAATTAATCGCAGGGGTTTATCGTGTTGTCGTGCCTGATAGCGGTGTCAGTAAACTTCAGCACATTCCTAGTGATAGGGAAGACATCACCAGTAACATACCAAGTATTAGGGCATTTGAAGACATGCTTGGTTCTTGGATTTGGTTATACATTATTGCATGATCCTTTCACAGAGAGGAACATTATTGGAATTACTATTGCTGTTTTTGGGATGGGGCTCTATTCTTATTTTTGCACCAATGAAACCAAAAAGAAAATCCCTATTGGGGATTTATCCACTGCATCCCAGGTATAATTCATCTCACTTTCCCTTTTTTTATTCTTACTATTTTCATTTAATACTTTTTTACTGCCAAAGCAAACTCCTTTTTCATATAAGCTACTTTCACAAATAAAATTCACCTTTTTACCTTTTTCTTAAAGAAATTTTGATTCCCACTTTTGGTTTTGATTAGCCTTAATTCTATTACTTTCCAACTTTTTCCCACTTTTTTCAAGTTTTTATTGACTTTGGCTACTCCCATTTTCCCCTTTATCTTATATACAAACAAGTACATGGCCAATTATTAATTACGTGCAAAAAATAAGGACCCCGTTCTCCTTCCCTTGAAAAACAATAGTAAAAATCAGTTTTAATAATAAAAACGATGTTAAATTATATTATTCCGGTGTTCCATATTAACTTTATTTTTAGAGGAAAATGGCAAAGACAGGTTCTCAAAATTTGATAAAGATATTTTAAGGAATAAAAAAAGTCTAAATACAAAAATTGAATGATTGCAGATAAAAGACCAGGAAAATTTGCCACTATCCTCGGTGAAGAATATGGGAATCCAAGACAATGAAAATCATGAAAAGATCAAAGCAGCCAAGGATTCTCTTGTCTAAATCAACTTTTTTTTTTTTTGAAAAAATTGGAGGCTGTATGATTTTTGTAAGGGATTGGTTATTTTTTAAGGTGTTTTTGGTCTTTCCTATTATATTCTAAAGGCAAGAAACAGTTGAGAGGATAATACACATCTTTTTGCAATAAGCTCCACAAAGCCTCTTTCTACTAACAAAGAAGTACGAGCGCAGACTTATTGTTAATATGAGTAAGGCCCTGTTCTTTTTGGCTTAATTTCAGCTTCATGACTTATTTGGCAGTTCAGTTC ATGGGAGAGAAATGGGGAATCCAAGTAGGAGTGGTAGGAGCATTGTTTCTATCAGTGGCGTCATCGGTTTCTATTGTCATTTGCAACAAAGCCTTGATGAGTAATCTTGGCTTCCCTTTTGCGACGACACTGACAAGTTGGCACTTGATGGTAACATATTGTACCCTTCACATAGCGCAACGCCTCAATTTTTTCGAGACAAAAACAGTGGAAATGAAGACAGTAATCTTGTTTGGAATACTTAATGGTATTTCAATAGGACTTCTTAACTTGAGCCTTGGTTTCAACTCCATTGGTTTTTACCAGATGACTAAGCTTGCCATTATACCTTTCACTGTCCTCTTGGAAACTCTTTTCCTCAACAAAAACTTCAGTCGGAAAATCAAGTTTTCTCTGTTCGTGTTGCTGGTGGGAGTTGGGATCGCCTCGATCACCGACCTGCAGCTCAATTTCGTTGGCACAGTTCTTTCTGGTTTAGCCATAGTCACAACATGCGTTGGTCAGATTCTGACAAACACAATACAGAAAAGGCTTAATGTATCATCGACACAATTGCTGTATCAATCAGCACCATTCCAAGCAGCTGTTCTGTTCGTGTTTGGTCCTATGGTCGATAAGTTCCTCACCAAACAAAGTGTCTTTGCGTTCAAGTATTCCCCCGTTGTCTTGGGGTTTATCGTGTTGTCGTGCCTGATAGCGGTGTCAGTAAACTTCAGCACATTCCTAGTGATAGGGAAGACATCACCAGTAACATACCAAGTATTAGGGCATTTGAAGACATGCTTGGTTCTTGGATTTGGTTATACATTATTGCATGATCCTTTCACAGAGAGGAACATTATTGGAATTACTATTGCTGTTTTTGGGATGGGGCTCTATTCTTATTTTTGCACCAATGAAACCAAAAAGAAAATCCCTATTGGGGATTTATCCACTGCATCCCAGATAAAAGACCAGGAAAATTTGCCACTATCCTCGGTGAAGAATATGGGAATCCAAGACAATGAAAATCATGAAAAGATCAAAGCAGCCAAGGATTCTCTTGTCTAAATCAACTTTTTTTTTTTTTGAAAAAATTGGAGGCTGTATGATTTTTGTAAGGGATTGGTTATTTTTTAAGGTGTTTTTGGTCTTTCCTATTATATTCTAAAGGCAAGAAACAGTTGAGAGGATAATACACATCTTTTTGCAATAAGCTCCACAAAGCCTCTTTCTACTAACAAAGAAGTACGAGCGCAGACTTATTGTTAATATGAGTAAGGCCCTGTTCTTTTTGGCTTAATTTCAGCTTCATGACTTATTTGGCAGTTCAGTTC ATGGGAGAGAAATGGGGAATCCAAGTAGGAGTGGTAGGAGCATTGTTTCTATCAGTGGCGTCATCGGTTTCTATTGTCATTTGCAACAAAGCCTTGATGAGTAATCTTGGCTTCCCTTTTGCGACGACACTGACAAGTTGGCACTTGATGGTAACATATTGTACCCTTCACATAGCGCAACGCCTCAATTTTTTCGAGACAAAAACAGTGGAAATGAAGACAGTAATCTTGTTTGGAATACTTAATGGTATTTCAATAGGACTTCTTAACTTGAGCCTTGGTTTCAACTCCATTGGTTTTTACCAGATGACTAAGCTTGCCATTATACCTTTCACTGTCCTCTTGGAAACTCTTTTCCTCAACAAAAACTTCAGTCGGAAAATCAAGTTTTCTCTGTTCGTGTTGCTGGTGGGAGTTGGGATCGCCTCGATCACCGACCTGCAGCTCAATTTCGTTGGCACAGTTCTTTCTGGTTTAGCCATAGTCACAACATGCGTTGGTCAGATTCTGACAAACACAATACAGAAAAGGCTTAATGTATCATCGACACAATTGCTGTATCAATCAGCACCATTCCAAGCAGCTGTTCTGTTCGTGTTTGGTCCTATGGTCGATAAGTTCCTCACCAAACAAAGTGTCTTTGCGTTCAAGTATTCCCCCGTTGTCTTGGGGTTTATCGTGTTGTCGTGCCTGATAGCGGTGTCAGTAAACTTCAGCACATTCCTAGTGATAGGGAAGACATCACCAGTAACATACCAAGTATTAGGGCATTTGAAGACATGCTTGGTTCTTGGATTTGGTTATACATTATTGCATGATCCTTTCACAGAGAGGAACATTATTGGAATTACTATTGCTGTTTTTGGGATGGGGCTCTATTCTTATTTTTGCACCAATGAAACCAAAAAGAAAATCCCTATTGGGGATTTATCCACTGCATCCCAGATAAAAGACCAGGAAAATTTGCCACTATCCTCGGTGAAGAATATGGGAATCCAAGACAATGAAAATCATGAAAAGATCAAAGCAGCCAAGGATTCTCTTGTCTAA MGEKWGIQVGVVGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTYCTLHIAQRLNFFETKTVEMKTVILFGILNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKNFSRKIKFSLFVLLVGVGIASITDLQLNFVGTVLSGLAIVTTCVGQILTNTIQKRLNVSSTQLLYQSAPFQAAVLFVFGPMVDKFLTKQSVFAFKYSPVVLGFIVLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLGFGYTLLHDPFTERNIIGITIAVFGMGLYSYFCTNETKKKIPIGDLSTASQIKDQENLPLSSVKNMGIQDNENHEKIKAAKDSLV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo11848.1 vs. NCBI nr
Match: gi|731355331|ref|XP_010689087.1| (PREDICTED: uncharacterized membrane protein At1g06890 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 623.2 bits (1606), Expect = 2.700e-175 Identity = 320/349 (91.69%), Postives = 341/349 (97.71%), Query Frame = 1
BLAST of Spo11848.1 vs. NCBI nr
Match: gi|225435339|ref|XP_002285229.1| (PREDICTED: uncharacterized membrane protein At1g06890 [Vitis vinifera]) HSP 1 Score: 557.0 bits (1434), Expect = 2.400e-155 Identity = 291/349 (83.38%), Postives = 320/349 (91.69%), Query Frame = 1
BLAST of Spo11848.1 vs. NCBI nr
Match: gi|356550202|ref|XP_003543477.1| (PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine max]) HSP 1 Score: 548.9 bits (1413), Expect = 6.400e-153 Identity = 286/349 (81.95%), Postives = 318/349 (91.12%), Query Frame = 1
BLAST of Spo11848.1 vs. NCBI nr
Match: gi|719992893|ref|XP_010253714.1| (PREDICTED: uncharacterized membrane protein At1g06890-like [Nelumbo nucifera]) HSP 1 Score: 547.4 bits (1409), Expect = 1.900e-152 Identity = 284/349 (81.38%), Postives = 317/349 (90.83%), Query Frame = 1
BLAST of Spo11848.1 vs. NCBI nr
Match: gi|356543480|ref|XP_003540188.1| (PREDICTED: uncharacterized membrane protein At1g06890 [Glycine max]) HSP 1 Score: 546.2 bits (1406), Expect = 4.200e-152 Identity = 286/349 (81.95%), Postives = 316/349 (90.54%), Query Frame = 1
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLL6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205250 PE=4 SV=1) HSP 1 Score: 623.2 bits (1606), Expect = 1.900e-175 Identity = 320/349 (91.69%), Postives = 341/349 (97.71%), Query Frame = 1
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Match: D7SKZ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02710 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 1.600e-155 Identity = 291/349 (83.38%), Postives = 320/349 (91.69%), Query Frame = 1
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QJG4_GLYSO (Putative membrane protein OS=Glycine soja GN=glysoja_021090 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 4.500e-153 Identity = 286/349 (81.95%), Postives = 318/349 (91.12%), Query Frame = 1
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Match: I1M4J5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G324900 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 4.500e-153 Identity = 286/349 (81.95%), Postives = 318/349 (91.12%), Query Frame = 1
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Match: K7LVI6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G174700 PE=4 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 2.900e-152 Identity = 286/349 (81.95%), Postives = 316/349 (90.54%), Query Frame = 1
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Match: Y1689_ARATH (Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 8.200e-116 Identity = 227/330 (68.79%), Postives = 267/330 (80.91%), Query Frame = 1
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Match: UGAL2_ARATH (UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.200e-47 Identity = 118/330 (35.76%), Postives = 196/330 (59.39%), Query Frame = 1
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Match: S35E3_BOVIN (Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.900e-38 Identity = 100/290 (34.48%), Postives = 160/290 (55.17%), Query Frame = 1
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Match: S35E3_DANRE (Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.200e-36 Identity = 96/286 (33.57%), Postives = 156/286 (54.55%), Query Frame = 1
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Match: S35E3_MOUSE (Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.900e-36 Identity = 99/290 (34.14%), Postives = 157/290 (54.14%), Query Frame = 1
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Match: AT2G28315.1 (Nucleotide/sugar transporter family protein) HSP 1 Score: 501.1 bits (1289), Expect = 5.400e-142 Identity = 268/342 (78.36%), Postives = 296/342 (86.55%), Query Frame = 1
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Match: AT1G06890.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 418.3 bits (1074), Expect = 4.600e-117 Identity = 227/330 (68.79%), Postives = 267/330 (80.91%), Query Frame = 1
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Match: AT2G30460.1 (Nucleotide/sugar transporter family protein) HSP 1 Score: 414.8 bits (1065), Expect = 5.100e-116 Identity = 224/330 (67.88%), Postives = 267/330 (80.91%), Query Frame = 1
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Match: AT1G21070.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 206.1 bits (523), Expect = 3.600e-53 Identity = 123/336 (36.61%), Postives = 204/336 (60.71%), Query Frame = 1
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Match: AT5G42420.1 (Nucleotide-sugar transporter family protein) HSP 1 Score: 199.9 bits (507), Expect = 2.600e-51 Identity = 119/318 (37.42%), Postives = 194/318 (61.01%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11848.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11848.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11848.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11848.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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